Metagenome / Metatranscriptome Family F071707

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	66 residues
Representative Sequence	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA
Number of Associated Samples	81
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.12 %
% of genes near scaffold ends (potentially truncated)	17.21 %
% of genes from short scaffolds (< 2000 bps)	80.33 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (21.311 % of family members)
Environment Ontology (ENVO)	Unclassified (36.066 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.836 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.22% β-sheet: 0.00% Coil/Unstructured: 39.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01546	Peptidase_M20	11.48
PF10518	TAT_signal	7.38
PF02700	PurS	4.10
PF02142	MGS	1.64
PF13522	GATase_6	1.64
PF13545	HTH_Crp_2	0.82
PF07992	Pyr_redox_2	0.82
PF08448	PAS_4	0.82
PF13560	HTH_31	0.82
PF03720	UDPG_MGDP_dh_C	0.82
PF14417	MEDS	0.82
PF00012	HSP70	0.82
PF00378	ECH_1	0.82
PF07687	M20_dimer	0.82
PF00128	Alpha-amylase	0.82
PF14066	DUF4256	0.82
PF00342	PGI	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	4.10
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.82
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.82
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.82
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.82
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.07 %
Unclassified	root	N/A	33.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobiia	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia	0.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae → Longimicrobium	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Longimicrobium terrae	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae → Longimicrobium → Longimicrobium terrae	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_163952	Not Available	656	Open in IMG/M
3300002906\|JGI25614J43888_10145457	Not Available	629	Open in IMG/M
3300003321\|soilH1_10054814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Longimicrobiia → Longimicrobiales → Longimicrobiaceae → Longimicrobium → Longimicrobium terrae	2388	Open in IMG/M
3300003324\|soilH2_10386164	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300004153\|Ga0063455_100000050	All Organisms → cellular organisms → Bacteria	9590	Open in IMG/M
3300004479\|Ga0062595_101761757	Not Available	586	Open in IMG/M
3300005177\|Ga0066690_10677086	Not Available	685	Open in IMG/M
3300005329\|Ga0070683_100117122	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300005329\|Ga0070683_100265644	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300005336\|Ga0070680_100094046	All Organisms → cellular organisms → Bacteria → Proteobacteria	2484	Open in IMG/M
3300005338\|Ga0068868_102044044	Not Available	544	Open in IMG/M
3300005345\|Ga0070692_10109510	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300005434\|Ga0070709_10017725	All Organisms → cellular organisms → Bacteria → Proteobacteria	4090	Open in IMG/M
3300005434\|Ga0070709_10341753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1103	Open in IMG/M
3300005434\|Ga0070709_11710672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	514	Open in IMG/M
3300005435\|Ga0070714_101168547	Not Available	750	Open in IMG/M
3300005435\|Ga0070714_101544041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	649	Open in IMG/M
3300005436\|Ga0070713_100367098	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005436\|Ga0070713_100518775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1126	Open in IMG/M
3300005436\|Ga0070713_100830733	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005436\|Ga0070713_102221395	Not Available	531	Open in IMG/M
3300005437\|Ga0070710_10020960	All Organisms → cellular organisms → Bacteria	3399	Open in IMG/M
3300005437\|Ga0070710_11035942	Not Available	599	Open in IMG/M
3300005437\|Ga0070710_11167772	Not Available	568	Open in IMG/M
3300005439\|Ga0070711_100003844	All Organisms → cellular organisms → Bacteria	8813	Open in IMG/M
3300005454\|Ga0066687_10494584	Not Available	722	Open in IMG/M
3300005458\|Ga0070681_10340099	Not Available	1410	Open in IMG/M
3300005537\|Ga0070730_10025393	All Organisms → cellular organisms → Bacteria → Proteobacteria	4533	Open in IMG/M
3300005542\|Ga0070732_10047871	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300005542\|Ga0070732_10536542	Not Available	709	Open in IMG/M
3300005557\|Ga0066704_10808398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	583	Open in IMG/M
3300005563\|Ga0068855_100011150	All Organisms → cellular organisms → Bacteria	10852	Open in IMG/M
3300005564\|Ga0070664_100747184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	913	Open in IMG/M
3300005575\|Ga0066702_10216943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300005575\|Ga0066702_10408152	Not Available	830	Open in IMG/M
3300005614\|Ga0068856_100678431	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300006028\|Ga0070717_10395583	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300006028\|Ga0070717_10481148	Not Available	1121	Open in IMG/M
3300006028\|Ga0070717_10762732	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300006028\|Ga0070717_11456264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	621	Open in IMG/M
3300006028\|Ga0070717_12152510	Not Available	501	Open in IMG/M
3300006163\|Ga0070715_10162148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1106	Open in IMG/M
3300006173\|Ga0070716_100270152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1168	Open in IMG/M
3300006806\|Ga0079220_10581176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	790	Open in IMG/M
3300006806\|Ga0079220_11161333	Not Available	632	Open in IMG/M
3300006806\|Ga0079220_11228175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	621	Open in IMG/M
3300006903\|Ga0075426_11124896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	595	Open in IMG/M
3300006954\|Ga0079219_12491531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	503	Open in IMG/M
3300007788\|Ga0099795_10128835	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009093\|Ga0105240_12182622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	574	Open in IMG/M
3300009143\|Ga0099792_10062905	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300010159\|Ga0099796_10141256	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010371\|Ga0134125_10118757	Not Available	2944	Open in IMG/M
3300010371\|Ga0134125_11323506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	786	Open in IMG/M
3300010373\|Ga0134128_10697533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1127	Open in IMG/M
3300010373\|Ga0134128_12375994	Not Available	584	Open in IMG/M
3300010373\|Ga0134128_12517300	Not Available	567	Open in IMG/M
3300010375\|Ga0105239_10205094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2209	Open in IMG/M
3300010375\|Ga0105239_11228966	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300010375\|Ga0105239_11735663	Not Available	723	Open in IMG/M
3300010401\|Ga0134121_13222232	Not Available	505	Open in IMG/M
3300011269\|Ga0137392_11327115	Not Available	578	Open in IMG/M
3300012206\|Ga0137380_10093443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2749	Open in IMG/M
3300012469\|Ga0150984_120786848	Not Available	627	Open in IMG/M
3300012683\|Ga0137398_10038342	Not Available	2769	Open in IMG/M
3300012683\|Ga0137398_10533733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	808	Open in IMG/M
3300012917\|Ga0137395_10404800	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300012924\|Ga0137413_11465478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	553	Open in IMG/M
3300012929\|Ga0137404_10013301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5764	Open in IMG/M
3300012941\|Ga0162652_100060835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	630	Open in IMG/M
3300012955\|Ga0164298_11600966	Not Available	513	Open in IMG/M
3300012984\|Ga0164309_11525872	Not Available	572	Open in IMG/M
3300012985\|Ga0164308_11384299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	642	Open in IMG/M
3300012986\|Ga0164304_10663976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	787	Open in IMG/M
3300012987\|Ga0164307_10260970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1214	Open in IMG/M
3300012987\|Ga0164307_11396158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	589	Open in IMG/M
3300012988\|Ga0164306_10001950	All Organisms → cellular organisms → Bacteria	9308	Open in IMG/M
3300012988\|Ga0164306_11067893	Not Available	669	Open in IMG/M
3300012989\|Ga0164305_12091665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	519	Open in IMG/M
3300012989\|Ga0164305_12132567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	514	Open in IMG/M
3300012989\|Ga0164305_12233495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	504	Open in IMG/M
3300013105\|Ga0157369_12422901	Not Available	531	Open in IMG/M
3300013105\|Ga0157369_12695625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	501	Open in IMG/M
3300013307\|Ga0157372_10277532	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300019789\|Ga0137408_1037684	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300019789\|Ga0137408_1381340	All Organisms → cellular organisms → Bacteria → Acidobacteria	4184	Open in IMG/M
3300019999\|Ga0193718_1112493	Not Available	546	Open in IMG/M
3300020070\|Ga0206356_11700621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	714	Open in IMG/M
3300021170\|Ga0210400_10320515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300024288\|Ga0179589_10286517	Not Available	738	Open in IMG/M
3300025912\|Ga0207707_10035377	All Organisms → cellular organisms → Bacteria → Proteobacteria	4368	Open in IMG/M
3300025912\|Ga0207707_10443819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1111	Open in IMG/M
3300025912\|Ga0207707_10567656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	963	Open in IMG/M
3300025912\|Ga0207707_10793615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	789	Open in IMG/M
3300025913\|Ga0207695_10445644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1178	Open in IMG/M
3300025913\|Ga0207695_10976426	Not Available	727	Open in IMG/M
3300025916\|Ga0207663_11072263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	647	Open in IMG/M
3300025916\|Ga0207663_11172212	Not Available	618	Open in IMG/M
3300025928\|Ga0207700_10001362	All Organisms → cellular organisms → Bacteria	13855	Open in IMG/M
3300025928\|Ga0207700_10585312	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300025928\|Ga0207700_10711202	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300025929\|Ga0207664_10364801	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300025929\|Ga0207664_11506307	Not Available	594	Open in IMG/M
3300025939\|Ga0207665_10132401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300025944\|Ga0207661_10131769	Not Available	2142	Open in IMG/M
3300025944\|Ga0207661_10397444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1249	Open in IMG/M
3300026023\|Ga0207677_11005495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	756	Open in IMG/M
3300026319\|Ga0209647_1298827	Not Available	541	Open in IMG/M
3300026527\|Ga0209059_1154507	Not Available	832	Open in IMG/M
3300027583\|Ga0209527_1089179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300027857\|Ga0209166_10028957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3379	Open in IMG/M
3300027903\|Ga0209488_10003504	All Organisms → cellular organisms → Bacteria	12591	Open in IMG/M
3300027903\|Ga0209488_10033587	All Organisms → cellular organisms → Bacteria → Acidobacteria	3743	Open in IMG/M
3300027903\|Ga0209488_10768241	Not Available	685	Open in IMG/M
3300028047\|Ga0209526_10108935	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300030847\|Ga0075405_11001573	Not Available	654	Open in IMG/M
3300030991\|Ga0073994_12351324	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300031057\|Ga0170834_107070925	Not Available	961	Open in IMG/M
3300031231\|Ga0170824_120788989	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300031938\|Ga0308175_102024115	Not Available	646	Open in IMG/M
3300033475\|Ga0310811_10731097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	947	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.89%
Host-Associated	Host-Associated	13.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.89%
Plants	Host-Associated → Plants	13.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.82%
Loam	Environmental → Terrestrial → Soil → Loam	35.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	32.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03021400	2199352024	Soil	MSLLATLSFFDIAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA
JGI25614J43888_101454572	3300002906	Grasslands Soil	MGRNEAYCSPLALGVSSMSLLAALSFFDIAVFGVALLAFAYLFNRFSGRDDTDALALTMHEINTVKPVPQAAKARAAGAA*
soilH1_100548142	3300003321	Sugarcane Root And Bulk Soil	MSLLTALSFFDIAVFGVALMVFAYLFNRFTGRDDTDALALTMREINTANPEPQPAKAKARAAGAA*
soilH2_103861642	3300003324	Sugarcane Root And Bulk Soil	MSLLTALSFFDIAVFGVALMVFAYLFNRFSGREDTDALALTMREINTANPEPQPAKAKARAAGAA*
Ga0063455_1000000501	3300004153	Soil	MPLLTAFSFFDITVFGVALFAFAYLFNRFAGREDTDALALTMHEINTAKPEPQSVPAKAKARAAGAA*
Ga0062595_1017617571	3300004479	Soil	MSLLAAISFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTAKPAPQAAKAKARAAGAA*
Ga0066690_106770862	3300005177	Soil	MSLLATLSFLDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070683_1001171222	3300005329	Corn Rhizosphere	MPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA*
Ga0070683_1002656443	3300005329	Corn Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVIPAPQAAKAKARAAGAA*
Ga0070680_1000940464	3300005336	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA*
Ga0068868_1020440441	3300005338	Miscanthus Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVVPAPQAAKAKARAAGAA*
Ga0070692_101095102	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPLLTALSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA*
Ga0070709_100177252	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTETLALIMHEINTVKPAPQAAKPKARAAGAA*
Ga0070709_103417531	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070709_117106722	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPEQQAAKAKARAAGAA*
Ga0070714_1011685472	3300005435	Agricultural Soil	MGRSEAYYSPPALGVRKMSLLTALSFFDVAIFGVALLVFAYLFNRFYGREDTDALALTMRQINTANPEPQPAKARARAAGAA*
Ga0070714_1015440411	3300005435	Agricultural Soil	MGRNAAYCSPPALGVSFMSLLSALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAKPSPQAAPAKAKARAAGAA*
Ga0070713_1003670981	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGRNAAYCSPPALGVSFMSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDKLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070713_1005187751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAAISFFDIAVFGVALFAFAYLFNRFYGREDTDVLALTMHEINTVKPAPQAVKAKARAAGAA*
Ga0070713_1008307332	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLAMTMHEINTVKPEQQAAKAKARAAGAA*
Ga0070713_1022213951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070710_100209604	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAAGAA*
Ga0070710_102663203	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FAVALFAFAYLFNRFYGREDTDRLALTMHEINAAQPLPQAAPAKAKARAAGAA*
Ga0070710_110359421	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGRNAAYCSPPALGVSFMSLLTALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPSPQAAPARAKARAAGAA*
Ga0070710_111677721	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFLDIAVFGVALLVFAYLFNRFSGKEDTDALALIMHEINTVKPAPQAAKPKARAAGVA*
Ga0070711_1000038447	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFLDIAVFGVALLIFAYLFNRFSGKEDTDMLALTMHEINTVRPAPQAAKAKARAAGVA*
Ga0066687_104945842	3300005454	Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTNTLALTMHEINTVKPATQAAKAKARAAGAA*
Ga0070681_103400991	3300005458	Corn Rhizosphere	MSLLTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGAA*
Ga0070730_100253932	3300005537	Surface Soil	MPLLAALSFFDIAVFGAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070732_100478713	3300005542	Surface Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070732_105365421	3300005542	Surface Soil	MSLLAAFSFFDIAVFGVALLAFAYLFNRFYGREDTDVLALTMREINTAKPSPQAGPAKAKARAAGAA*
Ga0066704_108083981	3300005557	Soil	MSLLAALSFFDIAVFGVALVAFAYLFDRFSGREDTDKLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0068855_1000111507	3300005563	Corn Rhizosphere	MPLLAALSFFDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTIKPVPQAAKAKAQAAGAA*
Ga0070664_1007471842	3300005564	Corn Rhizosphere	DIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPALQTAKAKARAAGAA*
Ga0066702_102169431	3300005575	Soil	MSLLATLSFLDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPASQAAKAKARAAGAA*
Ga0066702_104081522	3300005575	Soil	MPLLAALSFFDIAIFGVALLAFAYLFNRFSGREDTEALALTMHEINTVKPSPQAAKAKARAASAA*
Ga0068856_1006784311	3300005614	Corn Rhizosphere	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0070717_103955833	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPEQQAAKAKARAAGAA*
Ga0070717_104811481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGVALLVFAYLFNRFYGREDTDALALTMRQINTANPEPQPAKARARAAGAA*
Ga0070717_107627322	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFSDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070717_114562642	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDKLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070717_121525101	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGRNAAYCSPPALGVSFMSLLTALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA*
Ga0070715_101621483	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDISVFGVALVVFAYLFDRFSGREDTETLALTMHEINTVQPAPQAAKAKARAAGAA*
Ga0070716_1002701523	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLSALSFFDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAKPLPQAAPAKAKARAAGAA*
Ga0079220_105811761	3300006806	Agricultural Soil	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTDALALIMHEINTVKPAPQAAKPKARAAGVA*
Ga0079220_111613331	3300006806	Agricultural Soil	MPLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0079220_112281751	3300006806	Agricultural Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTETLALTMHEINTVQPAPQAAKAKARAAGAA*
Ga0075426_111248961	3300006903	Populus Rhizosphere	MPLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLVLTMHEINTVKPAPQAAKAKARAAGAA*
Ga0079219_124915311	3300006954	Agricultural Soil	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARTAGAA*
Ga0099795_101288352	3300007788	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0105240_121826221	3300009093	Corn Rhizosphere	AIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA*
Ga0099792_100629052	3300009143	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTAKPAPQAAKAKARVAGAA*
Ga0099796_101412561	3300010159	Vadose Zone Soil	MSLFAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTAKPAPQAAKAKARVAGAA*
Ga0134125_101187574	3300010371	Terrestrial Soil	MPLLTALSSFDIAIFGVALLVFAYLFNRFSGRDDTNALALTMHEINTVKTAPQAAKAKARAAGAA*
Ga0134125_113235061	3300010371	Terrestrial Soil	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTEALALTMHEINTVKPSTQAVKAKARAAGAA*
Ga0134128_106975332	3300010373	Terrestrial Soil	GVSLMPLLTALSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTINPEPQAAKAKARAAGAA*
Ga0134128_123759942	3300010373	Terrestrial Soil	MSLLAAISFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTAKPAPQ
Ga0134128_125173002	3300010373	Terrestrial Soil	MPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA*
Ga0105239_102050945	3300010375	Corn Rhizosphere	FFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVIPAPQAAKAKARAAGAA*
Ga0105239_112289662	3300010375	Corn Rhizosphere	MSLLAAFSFFDIAVFGVALFAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA*
Ga0105239_117356631	3300010375	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDHFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA*
Ga0134121_132222321	3300010401	Terrestrial Soil	MSLLAALPFFDIAVFGAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0137392_113271151	3300011269	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDTLALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0137380_100934432	3300012206	Vadose Zone Soil	MSLLAALSFFDIAVFGVALVAFAYLFDRFSGREDTGKLALTMHEINTVKPTPQAAKAKARAAGAA*
Ga0150984_1207868482	3300012469	Avena Fatua Rhizosphere	LMSLLATLSFLDVAIFGIAFMAFAFLFDRFSGREDTEALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0137398_100383421	3300012683	Vadose Zone Soil	MSLLAALSFLDIAIFGVALFVFAWLFNRFSGREDTDALALTMHEINTAKPASQAAKAKARAAGAA*
Ga0137398_105337332	3300012683	Vadose Zone Soil	MSLLTALTFFDVAVFGVALFAFAYLFNRFSGREDTNALALTMHEINTAQPAAQAAKAKARATSAA*
Ga0137395_104048001	3300012917	Vadose Zone Soil	MSLLAALSFLDIAIFGVALFVFAWLFNRFSGRDDTDTLALTMHEINTVKPAPQPAKARAAGAA*
Ga0137413_114654781	3300012924	Vadose Zone Soil	ALTFFDVAVFGVALFAFAYLFNRFSGREDTNALALTMHEINTAQPAAQAAKAKARAASAA
Ga0137404_100133016	3300012929	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFSRFSGRDDTDTLALTMHEINTVKPAPQPAKARAAGAA*
Ga0162652_1000608351	3300012941	Soil	MSLLAALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA*
Ga0164298_116009661	3300012955	Soil	MSLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALSLYEIITVKPAPQAAKAKARAAGAA*
Ga0164309_115258721	3300012984	Soil	MSLLTALSFFDVAIFGVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAK
Ga0164308_113842992	3300012985	Soil	CPQMPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA*
Ga0164304_106639762	3300012986	Soil	MSLLAALSFLDIAVFGVALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKANARAAGAA*
Ga0164307_102609702	3300012987	Soil	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPEAAKPKARAAGAA*
Ga0164307_113961581	3300012987	Soil	MSLLATLSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0164306_100019505	3300012988	Soil	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTIHEINTVKPAPQAAKPKARAAGAA*
Ga0164306_110678931	3300012988	Soil	MSLLATLSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGVA*
Ga0164305_120916651	3300012989	Soil	SLLTALSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKARAAGAA*
Ga0164305_121325671	3300012989	Soil	MPLLAALSFFDIAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKTKARAAGAA*
Ga0164305_122334952	3300012989	Soil	VQMSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAAGAA*
Ga0157369_124229011	3300013105	Corn Rhizosphere	MPLLATLSFFDIAIFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTIKPAPQAAKAKARAAGAA*
Ga0157369_126956252	3300013105	Corn Rhizosphere	AIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPALQTAKAKARAAGAA*
Ga0157372_102775322	3300013307	Corn Rhizosphere	MPLLAALSFFDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPALQTAKAKARAAGAA*
Ga0137408_10376841	3300019789	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFSRFSGRDDTDTLALTMHEINTVKPAPQPAKAARAAGA
Ga0137408_13813403	3300019789	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFSRFSGRDDTDTLALTMHEINTVKPAPQPAKARAAGAA
Ga0193718_11124931	3300019999	Soil	MSLLAALSFFDIAIFGVALFAFAYLFNRFSGRDDTDALALTMHEINTVKPAPQATKAKARAAGAA
Ga0206356_117006212	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	GVSFMSLLTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGAA
Ga0210400_103205153	3300021170	Soil	MSLLAALPFFDIAIFGVALFAFAWLFNRFSGREDTDTLALTMHEINTAKPAPQAAKAKARAAGAA
Ga0179589_102865171	3300024288	Vadose Zone Soil	MSLLSAFSFFDVAVFGAALFVFAWLFNRFSGREDTDALAVTMHEINTIKPAPQAAKAKAKTAGAA
Ga0207707_100353772	3300025912	Corn Rhizosphere	MPLLTALSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMHEINTVNPEPQAAKAKARAAGAA
Ga0207707_104438193	3300025912	Corn Rhizosphere	LTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGA
Ga0207707_105676561	3300025912	Corn Rhizosphere	MPLLAALSFFDVAIFGIAFLAFAFLFDRFSGREDTEALALTMHEINTIKPVPQAAKAKAQAAGAA
Ga0207707_107936151	3300025912	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA
Ga0207695_104456442	3300025913	Corn Rhizosphere	MSLLTAVSFLDIAIFGGALVAFAYLFNRFYGREDTDRLALTMHEINTAPQAAPAKAKARAAGAA
Ga0207695_109764262	3300025913	Corn Rhizosphere	MPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALAMTMHEINTVKPAPQTAKAKARAAGAA
Ga0207663_110722631	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LGVPVQMSLLAALPFLDIAVFGVALLIFAYLFNRFSGKEDTDMLALTMHEINTVRPAPQAAKAKARAAGVA
Ga0207663_111722122	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAA
Ga0207700_100013624	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLTALSFFDVAIFGIALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA
Ga0207700_105853122	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFGVALVVFAYLFDRFSGREDTDTLAMTMHEINTVKPEQQAAKAKARAAGAA
Ga0207700_107112021	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALSFFDIAVFAAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA
Ga0207664_103648012	3300025929	Agricultural Soil	MSLLAALQFFDIAVFGLALLVFAYLFNRFSGKEDTEALALTMHEINTVKPAPQAAKPKARAAGAA
Ga0207664_115063072	3300025929	Agricultural Soil	MGRNAAYCSPPALGVSFMSLLTALSFSDVAIFAVALFAFAYLFNRFYGREDTDRLALTMHEINTAQPLPQAAPAKAKARAAGAA
Ga0207665_101324014	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAALPFFDIAIFGVALVVFAYLFDRFSGREDTDTLALTMHEINTVKPEQQAAKAKARAAGAA
Ga0207661_101317691	3300025944	Corn Rhizosphere	PRMPLLAALSFFDIAVFGIAFLAFAFLFDRFSGREDTEALALTMHEINTVKPAPQTAKAKARAAGAA
Ga0207661_103974441	3300025944	Corn Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVIPAPQAAKAKARAAGAA
Ga0207677_110054952	3300026023	Miscanthus Rhizosphere	MPLLTNVSFFDIDAVFGVALLVFAYLFNRFSGREDTEALALTMHEINTVVPAPQAAKAKARAAGAA
Ga0209647_12988271	3300026319	Grasslands Soil	MSLLAALSFFDIAVFGVALLAFAYLFNRFSGRDDTDALALTMHEINTVKPVPQAAKARAAGAA
Ga0209059_11545072	3300026527	Soil	MSLLATLSFLDVAIFGIAFLAFAFLFDRFSGRGDTEALALTMHEINTIKPAPQATKAKARAAGAA
Ga0209527_10891792	3300027583	Forest Soil	ALGVSFMSLLTALSFFDIAIFGVALFAFAYLFNRFSGRDDTDALALTMHEINTAKPATQAAKAKARAAGAA
Ga0209166_100289573	3300027857	Surface Soil	MPLLAALSFFDIAVFGAALVVFAYLFDRFSGREDTDTLALTMHEINTVKPAPQAAKAKARAAGAA
Ga0209488_100035043	3300027903	Vadose Zone Soil	MSLLAALSFFDIAIFGVALFVFAWLFNRFSGRDDTDALALTMHEINTAKPAPQAAKAKARVAGAA
Ga0209488_100335874	3300027903	Vadose Zone Soil	MPLLAALSFFDIAIFGVALLVFAYLFNRFSGREDTEALALTMHEINTVKPAPQAAKAKARAASAA
Ga0209488_107682411	3300027903	Vadose Zone Soil	MSLLTALTFFDVAVFGVALFAFAYLFNRFSGREDTNALALTMHEINTAQPAAQAAKAKARAASAA
Ga0209526_101089352	3300028047	Forest Soil	MSLLTALSFFDIAIFGVALLAFAWLFNRFSGREDTNALALTMHEINTVKPAPQAAKAKARAAGAA
Ga0075405_110015731	3300030847	Soil	MSLLTAFSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMRQINIADPASQPAKAKARAAGAA
Ga0073994_123513242	3300030991	Soil	MSLLATFSFFDAAVFGVALFAFAYLFNRFSGSDDTVALALTMHEINTVRPAPQAVKAKARAAGAA
Ga0170834_1070709252	3300031057	Forest Soil	MSLLTAFSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMRQINIADPTPQPATAKARAAGAA
Ga0170824_1207889892	3300031231	Forest Soil	MSLLTAFSFFDIAVFGVALLAFAYLFNRFSGREDTDALALTMRQINIADPTPQPAKAKARAAGAA
Ga0308175_1020241152	3300031938	Soil	MPLLAALSFFDIAIFGIAFLAFAFIFDRFSGREDTEALALTMHEINTIKPAPQAAKAKARAAGAA
Ga0310811_107310972	3300033475	Soil	MSLLATLSFFDIAIFGVALLAFAYLFNRFSGREDTDALALTMHEINTVKPAPQAAKAKAQAAGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences