Metagenome / Metatranscriptome Family F071741

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071741
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	95 residues
Representative Sequence	MKREIHWSLLTMVTATLAMVGTAFCLNPSSSMKYQPAADNSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Number of Associated Samples	80
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.13 %
% of genes near scaffold ends (potentially truncated)	31.15 %
% of genes from short scaffolds (< 2000 bps)	87.70 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.984 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.066 % of family members)
Environment Ontology (ENVO)	Unclassified (55.738 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.770 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.80% β-sheet: 12.00% Coil/Unstructured: 51.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00072	Response_reg	22.13
PF04972	BON	13.93
PF00296	Bac_luciferase	2.46
PF02518	HATPase_c	1.64
PF02416	TatA_B_E	0.82
PF13561	adh_short_C2	0.82
PF02954	HTH_8	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.46
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.98 %
All Organisms	root	All Organisms	9.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.98 %
cellular organisms	root	All Organisms → cellular organisms	9.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104928557	Not Available	672	Open in IMG/M
3300001175\|JGI12649J13570_1020331	Not Available	718	Open in IMG/M
3300001471\|JGI12712J15308_10072104	Not Available	874	Open in IMG/M
3300002245\|JGIcombinedJ26739_100268082	Not Available	1594	Open in IMG/M
3300004080\|Ga0062385_10387723	Not Available	831	Open in IMG/M
3300004082\|Ga0062384_100008897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3749	Open in IMG/M
3300004091\|Ga0062387_100225465	Not Available	1152	Open in IMG/M
3300004091\|Ga0062387_101367275	Not Available	562	Open in IMG/M
3300004092\|Ga0062389_100120826	All Organisms → cellular organisms → Bacteria → Proteobacteria	2384	Open in IMG/M
3300004092\|Ga0062389_100179477	Not Available	2047	Open in IMG/M
3300004139\|Ga0058897_10818732	Not Available	518	Open in IMG/M
3300004635\|Ga0062388_100284582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300005538\|Ga0070731_10015062	All Organisms → cellular organisms → Bacteria	5495	Open in IMG/M
3300005538\|Ga0070731_10810486	Not Available	621	Open in IMG/M
3300005591\|Ga0070761_10128218	Not Available	1476	Open in IMG/M
3300005602\|Ga0070762_10119782	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300005602\|Ga0070762_10703895	Not Available	678	Open in IMG/M
3300005610\|Ga0070763_10991742	Not Available	503	Open in IMG/M
3300005921\|Ga0070766_10215516	Not Available	1206	Open in IMG/M
3300011270\|Ga0137391_10810307	Not Available	771	Open in IMG/M
3300012202\|Ga0137363_10023431	All Organisms → cellular organisms → Bacteria → Proteobacteria	4176	Open in IMG/M
3300012361\|Ga0137360_11399010	Not Available	602	Open in IMG/M
3300012924\|Ga0137413_11464215	Not Available	554	Open in IMG/M
3300014501\|Ga0182024_10007592	All Organisms → cellular organisms → Bacteria	23330	Open in IMG/M
3300014501\|Ga0182024_11185789	Not Available	894	Open in IMG/M
3300014501\|Ga0182024_12063135	Not Available	628	Open in IMG/M
3300018042\|Ga0187871_10032754	All Organisms → cellular organisms → Bacteria → Proteobacteria	3237	Open in IMG/M
3300019166\|Ga0184595_108814	Not Available	1255	Open in IMG/M
3300019189\|Ga0184585_106001	Not Available	819	Open in IMG/M
3300019189\|Ga0184585_107663	Not Available	563	Open in IMG/M
3300019189\|Ga0184585_131950	Not Available	785	Open in IMG/M
3300019786\|Ga0182025_1234884	Not Available	1268	Open in IMG/M
3300020579\|Ga0210407_10117616	Not Available	2031	Open in IMG/M
3300020580\|Ga0210403_10757005	Not Available	775	Open in IMG/M
3300020581\|Ga0210399_10913014	Not Available	712	Open in IMG/M
3300020582\|Ga0210395_10192728	Not Available	1528	Open in IMG/M
3300020583\|Ga0210401_10138197	Not Available	2280	Open in IMG/M
3300020583\|Ga0210401_10401246	Not Available	1233	Open in IMG/M
3300020583\|Ga0210401_10478693	Not Available	1108	Open in IMG/M
3300021168\|Ga0210406_10795489	Not Available	720	Open in IMG/M
3300021170\|Ga0210400_10166459	Not Available	1781	Open in IMG/M
3300021171\|Ga0210405_10175572	Not Available	1698	Open in IMG/M
3300021171\|Ga0210405_10209591	Not Available	1545	Open in IMG/M
3300021171\|Ga0210405_10455221	Not Available	1006	Open in IMG/M
3300021180\|Ga0210396_10530080	Not Available	1029	Open in IMG/M
3300021181\|Ga0210388_10851355	Not Available	788	Open in IMG/M
3300021401\|Ga0210393_10035994	Not Available	3876	Open in IMG/M
3300021401\|Ga0210393_10080954	Not Available	2572	Open in IMG/M
3300021401\|Ga0210393_10648261	Not Available	862	Open in IMG/M
3300021401\|Ga0210393_11504894	Not Available	536	Open in IMG/M
3300021402\|Ga0210385_11287872	Not Available	560	Open in IMG/M
3300021405\|Ga0210387_10363617	Not Available	1280	Open in IMG/M
3300021406\|Ga0210386_11721102	Not Available	518	Open in IMG/M
3300021420\|Ga0210394_10214383	Not Available	1680	Open in IMG/M
3300021432\|Ga0210384_10235306	Not Available	1649	Open in IMG/M
3300021432\|Ga0210384_11851521	Not Available	509	Open in IMG/M
3300021433\|Ga0210391_11449155	Not Available	527	Open in IMG/M
3300021478\|Ga0210402_11222554	Not Available	679	Open in IMG/M
3300021479\|Ga0210410_11292643	Not Available	622	Open in IMG/M
3300022530\|Ga0242658_1248962	Not Available	502	Open in IMG/M
3300022531\|Ga0242660_1119018	Not Available	665	Open in IMG/M
3300022533\|Ga0242662_10158739	Not Available	689	Open in IMG/M
3300022533\|Ga0242662_10327490	Not Available	517	Open in IMG/M
3300022712\|Ga0242653_1073525	Not Available	591	Open in IMG/M
3300022712\|Ga0242653_1115636	Not Available	503	Open in IMG/M
3300022714\|Ga0242671_1033607	Not Available	787	Open in IMG/M
3300022726\|Ga0242654_10046864	Not Available	1206	Open in IMG/M
3300022733\|Ga0224562_1022546	Not Available	521	Open in IMG/M
3300023544\|Ga0247542_100555	Not Available	1059	Open in IMG/M
3300023660\|Ga0247550_101243	Not Available	785	Open in IMG/M
3300024227\|Ga0228598_1055751	Not Available	785	Open in IMG/M
3300026551\|Ga0209648_10559594	Not Available	637	Open in IMG/M
3300027590\|Ga0209116_1112500	Not Available	598	Open in IMG/M
3300027609\|Ga0209221_1002409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4678	Open in IMG/M
3300027619\|Ga0209330_1104967	Not Available	642	Open in IMG/M
3300027619\|Ga0209330_1124322	Not Available	585	Open in IMG/M
3300027767\|Ga0209655_10271456	Not Available	550	Open in IMG/M
3300027783\|Ga0209448_10057674	Not Available	1306	Open in IMG/M
3300027869\|Ga0209579_10118251	Not Available	1408	Open in IMG/M
3300027884\|Ga0209275_10089604	Not Available	1556	Open in IMG/M
3300027895\|Ga0209624_10562004	Not Available	758	Open in IMG/M
3300027908\|Ga0209006_10374893	Not Available	1203	Open in IMG/M
3300027908\|Ga0209006_10543572	Not Available	965	Open in IMG/M
3300027908\|Ga0209006_11031000	Not Available	653	Open in IMG/M
3300028047\|Ga0209526_10262661	Not Available	1178	Open in IMG/M
3300028047\|Ga0209526_10916172	Not Available	531	Open in IMG/M
3300028906\|Ga0308309_11466274	Not Available	584	Open in IMG/M
3300030730\|Ga0307482_1023119	Not Available	1314	Open in IMG/M
3300030730\|Ga0307482_1024670	Not Available	1286	Open in IMG/M
3300030730\|Ga0307482_1037678	Not Available	1117	Open in IMG/M
3300030730\|Ga0307482_1065153	Not Available	924	Open in IMG/M
3300030855\|Ga0075374_10741978	Not Available	623	Open in IMG/M
3300030937\|Ga0138302_1073022	Not Available	1363	Open in IMG/M
3300030937\|Ga0138302_1274430	Not Available	625	Open in IMG/M
3300030937\|Ga0138302_1323722	Not Available	597	Open in IMG/M
3300030937\|Ga0138302_1654556	Not Available	778	Open in IMG/M
3300030937\|Ga0138302_1726706	Not Available	793	Open in IMG/M
3300031022\|Ga0138301_1207568	Not Available	775	Open in IMG/M
3300031022\|Ga0138301_1538520	Not Available	595	Open in IMG/M
3300031022\|Ga0138301_1640528	Not Available	923	Open in IMG/M
3300031057\|Ga0170834_101327482	Not Available	566	Open in IMG/M
3300031057\|Ga0170834_113083811	Not Available	1656	Open in IMG/M
3300031231\|Ga0170824_110248879	Not Available	599	Open in IMG/M
3300031590\|Ga0307483_1014070	Not Available	734	Open in IMG/M
3300031663\|Ga0307484_103490	Not Available	899	Open in IMG/M
3300031663\|Ga0307484_105765	Not Available	762	Open in IMG/M
3300031663\|Ga0307484_110259	Not Available	626	Open in IMG/M
3300031708\|Ga0310686_105176738	Not Available	1383	Open in IMG/M
3300031708\|Ga0310686_113203310	Not Available	842	Open in IMG/M
3300031708\|Ga0310686_117590298	Not Available	1518	Open in IMG/M
3300031718\|Ga0307474_10047611	All Organisms → cellular organisms → Bacteria → Proteobacteria	3162	Open in IMG/M
3300031718\|Ga0307474_10109643	Not Available	2068	Open in IMG/M
3300031718\|Ga0307474_10191977	Not Available	1553	Open in IMG/M
3300031823\|Ga0307478_10020982	All Organisms → cellular organisms → Bacteria	4611	Open in IMG/M
3300031823\|Ga0307478_10266937	Not Available	1394	Open in IMG/M
3300031866\|Ga0316049_106537	Not Available	789	Open in IMG/M
3300031962\|Ga0307479_10787842	Not Available	927	Open in IMG/M
3300032174\|Ga0307470_10432642	Not Available	941	Open in IMG/M
3300032515\|Ga0348332_11023025	Not Available	1346	Open in IMG/M
3300032515\|Ga0348332_11496400	Not Available	883	Open in IMG/M
3300032515\|Ga0348332_12300494	Not Available	1244	Open in IMG/M
3300032515\|Ga0348332_14086208	Not Available	1612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.98%
Aquatic	Environmental → Aquatic	8.20%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.70%
Freshwater	Environmental → Aquatic → Freshwater	8.20%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.21%
Loam	Environmental → Terrestrial → Soil → Loam	17.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.28%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.28%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.02%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.28%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.28%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.28%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300019166	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023544	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023660	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049285572	3300000364	Soil	MKREFQWSLLTTAVATIAMVGTAFCLNPSSSMKYQVPADKPLQIVRSVVKVHTDHGVVTMPGEADSWDAAERAVFVADSIADLQIANSEVPWKIVLQ*
JGI12649J13570_10203311	3300001175	Forest Soil	MKREILWSLLTMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEV
JGI12712J15308_100721042	3300001471	Forest Soil	MKRENHWALLTMVIAFLAIVGTGFCLNPSSDTQYPTNSADNSRPIKRNVVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQLANSEIPWKISLQ*
JGIcombinedJ26739_1002680822	3300002245	Forest Soil	MKRENHWSLLTMVVATLAIVGTAFCLNPSSNMQYPTNADNTRPVMRSIVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEVPWKISFQ*
Ga0062385_103877231	3300004080	Bog Forest Soil	MKRENLWYLLTTATATLAMFGTAFCLSPSSNNQYPTSADNSRPVVRSIVKVHTDHGVITMPGSADSWAAAERAVFVADSIADMQIANSEIPWRISFE*
Ga0062384_1000088975	3300004082	Bog Forest Soil	MKREISWSLLTMVVATIAIVGTAFCLNYSPSMQYRVGAEDSLPITRSVIKVHTDHGVVTIPGKADSWDATERAVFVADSIADLQIANSEVPWRIALQ*
Ga0062387_1002254652	3300004091	Bog Forest Soil	MKREIRWYLLTTVSATLAIVGTAFCLNPSSSMQYPAAADNSRPIVRSVVKVHTDHGVVTIPGKADTWDEAERALFLADSIADLQIANSEVPWKIALE*
Ga0062387_1013672751	3300004091	Bog Forest Soil	MKREISWSLLTMVVATIAIVGTAFCLNYSPSMQYRVGAEDSLPITRSVIKVHTDHGVVTIPGKADSWDATERAVFVADSIADLQIANS
Ga0062389_1001208263	3300004092	Bog Forest Soil	MKREIQFVLSTVMIAAVAIVGPAFCLNHFPATQYRVAGASLPIRRSVIKVHTDHGVVTMPGNADSWDAAERAVFVADSVADMEIVNNEIPWRISVE*
Ga0062389_1001794773	3300004092	Bog Forest Soil	MKRENLWYLLTTATATLAMFGTAFCLSPSSNNQYPTSADNSRPVVRSIVKVHTDHGVITMPGSADSWAAAERAVFVADSIADMQIANSEIPW
Ga0058897_108187322	3300004139	Forest Soil	QMKREIHWSLLTMVAATLAMVGTAFCLNPSSSMKYQPAADNSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE*
Ga0062388_1002845823	3300004635	Bog Forest Soil	MKREIQFVLSTVMIAAVAIVGPAFCLNHFPATQYRVAGASLPIRRSVIKVHTDHGVVTMPGNADSWDAAERAVFVADSIADMEIVNNEI
Ga0070731_100150624	3300005538	Surface Soil	MKRENHWALLTMVIAFLAMVGTAFCLNPATSMQNPTNNAYNSRPIMRSVVKVHTDHGVITMPGKADSWAAAERAVFVADSIADVQIANSEIPWKISFE*
Ga0070731_108104862	3300005538	Surface Soil	MKREIQWSLFTMVVATFAMVGTAFCLNPSSPSSMKYQARADESQPVERSVVKVHTDHGVVTIPGKADNWDAAERAVFVADSIADLQVANSE
Ga0070761_101282184	3300005591	Soil	MKREILWSLLTMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEVPWQIALQ*
Ga0070762_101197822	3300005602	Soil	MKREIQWSVLTTVVATLAMVGTAFCLNPSSSAKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEEAERAVFVADSIADLQMANSEVPWRIALE*
Ga0070762_107038952	3300005602	Soil	MKRENQWALLTMAIGFLAIVGTGFCLNPSSNMQYQTYANNSRPVMRSVVKVHTDHGVITMPGNVDSWASAERAIFVADSIADVQIANSEIPWRISFQ*
Ga0070763_109917421	3300005610	Soil	GRQMKRENQWALSTMVIAFLAVVGTGFCLNPSSNMQYQTYANNSRPVMRSVVKVHTDHGVITMPGNVDSWASAERAIFVADSIADVQIANSEIPWRISFQ*
Ga0070766_102155163	3300005921	Soil	MKRENQWSILTMVIAFLAIVGTAFCLNPSSNMQYPTIAESSRPVMRSVVKVHTDHGVITMPGNVDSWASAERAIFVADSIADVQIANSEIPWRISFQ*
Ga0137391_108103072	3300011270	Vadose Zone Soil	MKREIHWYLLTMVVATLAMVGTAFCLNPSYNTNYQSVAGNSLPIKRSVVKVHTDHGVVTIPGEADSWDAAERAVFVADSIADLQIANSEVPWRVALE*
Ga0137363_100234314	3300012202	Vadose Zone Soil	MVVATLAMVGTAFCLNPSYNTNYQSVAGNSLPIKRSVVKVHTDHGVVTIPGEADSWDAAERAVFVADSIADLQIANSEVPWRVALE*
Ga0137360_113990102	3300012361	Vadose Zone Soil	MKRETHWSLLTMVVATLAMVGTAFCLNPSSTKYDPSADNSAPIVRSVVKVHTDHGVVTVPGNADSWDAAERAVFVADSIADLQIANSEVPWRIALE*
Ga0137413_114642151	3300012924	Vadose Zone Soil	MKREIEWSLLTIVVATLAMVGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWDAAERAVFIADSIADLQIANSEVPWKIVLQ*
Ga0182024_1000759214	3300014501	Permafrost	MKREIQWSLLTTVGATLAIVGTAFCLNPSSSMQYRATADNSRPVVRSVVKVHTDHGVVTIPGKADTWDEAERALFVADSIADLQIANSEVPWKIALE*
Ga0182024_111857891	3300014501	Permafrost	MKREIQWSLLTMVVATLAMVGTAFCLNPSSSSGMKYQARADESHPIVRSVVKVHTDHGVVTIPGKADTWDEAERAVFVADSIADLQIANSEVPWRIALE*
Ga0182024_120631352	3300014501	Permafrost	MKREIQWSILTMVIATLAMVGTAFCLNPSSSSGMKYQARADESHPIVRSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQIANSEVPWRIALE*
Ga0187871_100327542	3300018042	Peatland	MKREILWSLLTVVVATIAMIGTAFCLNYSPSMQYRVAAEDSHPIMRSVIKVHTDHGVVTIPGNADSWDAVDRAVFVADSIADLQIANSEVPWKIALQ
Ga0184595_1088142	3300019166	Soil	MKSKVQFVMSTVTIAAMAIVGPAFCLNHSPAMQYRVAGDSLPVRRSVIKVHTDHGVVTMPGNADSWDAAERAVFVADSIADMEIVNNEIPWRISVE
Ga0184585_1060012	3300019189	Soil	MKREIRWYLLTTVSATLAIVGTAFCLNLSSSMQYPAAADNSRPIVRSVVKVHTDHGVVTIPGKADTWDEAERALFVADSIADLQIANSEVPWKIALE
Ga0184585_1076631	3300019189	Soil	CPFGGKQMKRENLWYLLTTAAATLAMFGTAFCLSPSSNVQYPTGADNSRPVMRSIVKVHTDHGVITMPGSADSWAAAERAVFVADSIADMQIANSEIPWQISFE
Ga0184585_1319502	3300019189	Soil	WNGEKQMKREILWSLLTMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHLVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEVPWQIALQ
Ga0182025_12348841	3300019786	Permafrost	MKREIQWSLLTTVGATLAIVGTAFCLNPSSSMQYRATADNSRPVVRSVVKVHTDHGVVTIPGKADTWDEAERALFVADSIADL
Ga0210407_101176164	3300020579	Soil	MKREIHWSLLTMVTATLAMVGTAFCLNPSSSMKYQPAADNSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0210403_107570051	3300020580	Soil	MKREIQWSLLTIVTATLAMVGTAFCLNPSSPTNMKYQPRADESQPVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0210399_109130142	3300020581	Soil	MKREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRPAADNSRPVVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0210395_101927282	3300020582	Soil	MKREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRATADNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0210401_101381971	3300020583	Soil	MKREIQWSLLTTVVATLAMVGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWSIALE
Ga0210401_104012462	3300020583	Soil	MKRENHWSLLTMVVATLAIVGTAFCLNPSSNMQYPTNADNTLPAMRSIVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEVPWKISLQ
Ga0210401_104786931	3300020583	Soil	MKREIQWSLLTTAVATLAMVGTAFCLNPSSSMKYQPLADESQPAVRSVVKVHTDHGVVTIPGKADSWEAAERAIFIADSIADLQIANSEVPWRIALE
Ga0210406_107954892	3300021168	Soil	AMVGTAFCLNPSSSMKYQPAADNSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0210400_101664594	3300021170	Soil	MKRENHWSLLTMVVATLAIVGTAFCLNPSSNMQYPTNADKTRPAMRSIVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEVPWKISLQ
Ga0210405_101755722	3300021171	Soil	MKRENHWALLTMVVATLAIVGTAFCLNPSSNMQYPTNSTNNSSPIMRSVVKVHTDHGVITMPGNADSWAAADRAVFVADSIADVQIANSEIPWRISLQ
Ga0210405_102095912	3300021171	Soil	MKREIQWSLLTMVVATLAMVGTAFCLNPSSNMKYQPRTTDESQATVRSVVKVHTDHGVVTIPGQADSWEAAERAVFVADSIADLQIANSEVPWRIALE
Ga0210405_104552212	3300021171	Soil	MKREIQWSLLTIVTATLAMVGTAFCLNPSSPTNMKYQPRADESQQVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQIANSQVPWRIALE
Ga0210396_105300801	3300021180	Soil	MKREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRATADNSRPVVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0210388_108513552	3300021181	Soil	MKREILWSLLTMVVATVAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEVPWQIALQ
Ga0210393_100359944	3300021401	Soil	MKREILWSLLTMVTASLAMVGTAFCLNPSSSFQYRAATDNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0210393_100809543	3300021401	Soil	MKREIQWSLLTVVVATLAMVGTAFCLNPSSSSSMKYQPSADESRPIARSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWRIALE
Ga0210393_106482612	3300021401	Soil	MKREILWSLLTMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEVPWQIALQ
Ga0210393_115048941	3300021401	Soil	MKREIQWSLLTTVTATLAMVGTAFCLNPSSPTNMKYQPRADESQPVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQI
Ga0210385_112878721	3300021402	Soil	MKREILWSLLTMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIA
Ga0210387_103636172	3300021405	Soil	MKREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRPAADNSPPVVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0210386_117211021	3300021406	Soil	MKRENHWSLLTMVVATLAIVGTASCLNPSSNMQYPTNADKTRPAMRSIVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEVPWKISLQ
Ga0210394_102143832	3300021420	Soil	MKREIRWYLLTTVSATLAIVGTAFCLNPSSSMQYPAAADNSRPIVRSVVKVHTDHGVVTIPGKADTWDEAERALFVADSIADLQIANSEVPWKIALE
Ga0210384_102353062	3300021432	Soil	MKRENQWALSTMVIAFLAVVGTGFCLNPSSNMQYQTYANNSRPVMRSVVKVHTDHGVITMPGNVDSWASAERAIFVADSIADVQIANSEIPWRISFQ
Ga0210384_118515211	3300021432	Soil	MKREIQWSLLTIVTATLAMVGTAFCLNPSSPTNMKYQPRADESQPVERSIVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADVQIANSEVPWRITLE
Ga0210391_114491551	3300021433	Soil	MKREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRPAADNSRLVVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0210402_112225541	3300021478	Soil	MKREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRATTDNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADS
Ga0210410_112926432	3300021479	Soil	LTVVVATLAMVGTAFCLNPSSSSSMKYQPSADESRPIARSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWRIALE
Ga0242658_12489621	3300022530	Soil	EIQWSLLTIVTATLAMAGTAFCLNPSSPTNMKYQPRADESQPVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADRIADLQIANSQVPWRIALE
Ga0242660_11190181	3300022531	Soil	QMKREIQWSLLTVVVATLAMVGTAFCLNPSSSSSMKYQPSADESRPIARSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWRIALE
Ga0242662_101587391	3300022533	Soil	QMKREIHWSLLTMVAATLAMVGTAFCLNPSSSMKYQPAADNSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0242662_103274902	3300022533	Soil	MKREIQWSLLTIVTATLAMAGTAFCLNPSSPSNMKYQPRADESQPVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0242653_10735252	3300022712	Soil	KREIQWSLLTTVTATLAIVGTAFCLNPSSSMQYRATADNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0242653_11156361	3300022712	Soil	QMKREIHWSLLTMVVATLAMVGTAFCLNPSSSTKYQPADNSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0242671_10336072	3300022714	Soil	TMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEVPWQIALQ
Ga0242654_100468643	3300022726	Soil	MKREIQWSLLTIVTATLAMVGTAFCLNPSSPSNMKYQPRADESQPVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQIANSQVPWRIALE
Ga0224562_10225461	3300022733	Soil	MKRENLWYLLTTAAATLAMFGTAFCLSPSSNVQYPTGADNSRPVMRSIVKVHTDHGVITMPGSADSWAAAERAVFVADSIADMQIANSEIPWQISFE
Ga0247542_1005553	3300023544	Soil	YLLTTVSATLAIVGTAFCLNLSSSMQYPAAADNSRPIVRSVVKVHTDHGVVTIPGKADTWDEAERALFVADSIADLQIANSEVPWKIALE
Ga0247550_1012431	3300023660	Soil	QMKREISWSLLTMVVATVAIVGTAFCLNYSPRMQYRVGAEDSLPITRSVIKVHTDHGVVTIPGNADSWDAVDRAVFVADSIADLQIANSEVPWRIALQ
Ga0228598_10557512	3300024227	Rhizosphere	MKREISWSLLTMVVATVAIVGTAFCLNYSPSMQYRVGAEDSLPITRSVIKVHTDHGVVTIPGKADSWDATERAVFVADSIADLQIANSEVPWRIALQ
Ga0209648_105595942	3300026551	Grasslands Soil	MKREIHWYLLTMVVATLAIVGTAFCLNPSYNAKYQPVADNSVPIKQSVVKVHTNHGVVTIPGNADSWDAAERAVFVADSIADLQIANSEVPWQIAIE
Ga0209116_11125001	3300027590	Forest Soil	MKREILWSLLTVVVATIAMIGTAFCLNYSPSMQYRVAAEDSHPIMRSVIKVHTDHGVVTIPGNADSWDAVDRAVFVADSIADLQIANSEVPWQIALQ
Ga0209221_10024094	3300027609	Forest Soil	MKREILWSLLTMVVATIAMIGTAFCLNYSPSMQYRVAAQDSHPVMRSVIKVHTDHGVVTIPGSANSWDAVDRAVFVADSIADLQIANSEVPWKIALQ
Ga0209330_11049672	3300027619	Forest Soil	MKREIQWSLLTTVAATLAMVGTAFCLNPSSSTQYRPTADNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0209330_11243221	3300027619	Forest Soil	MKRENHWALLTMVIAFLAIVGTGFCLNPSSDMQYPANSADNSRPIKRNVVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQLANSEIPWKISLQ
Ga0209655_102714561	3300027767	Bog Forest Soil	SAGGMPIAGSTSFQLRWLEWRKQMKREISWSLLTMVVATIAIVGTAFCLNYSPSMQYRVGAEDSLPITRSVIKVHTDHGVVTIPGKADSWDATERAVFVADSIADLQIANSEVPWRIALQ
Ga0209448_100576742	3300027783	Bog Forest Soil	MKREIRWYLLTTVSATLAIVGTAFCLNPSSSMQYPAAADNSRPIVRSVVKVHTDHGVVTIPGKADTWDEAERALFLADSIADLQIANSEVPWKIALE
Ga0209579_101182513	3300027869	Surface Soil	MKRENHWALLTMVIAFLAMVGTAFCLNPATSMQNPTNNAYNSRPIMRSVVKVHTDHGVITMPGKADSWAAAERAVFVADSIADVQIANSEIPWKISFE
Ga0209275_100896042	3300027884	Soil	MKREIQWSVLTTVVATLAMVGTAFCLNPSSSAKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEEAERAVFVADSIADLQMANSEVPWRIALE
Ga0209624_105620042	3300027895	Forest Soil	MKREIQWSLLTTVAATLAMVGTAFCLNPSSSMQYPTAADNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0209006_103748931	3300027908	Forest Soil	MKREIQWSLLTTVTATLAMVGTAFCLNPSSPTNMKYQPRADESQPVERSVVKVHTDHGVVTIPGEARSWEATERAVFVADSIADLQIANSEVPWRIALE
Ga0209006_105435723	3300027908	Forest Soil	MKREIRWSLLTTVVATLAMVGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWTIALE
Ga0209006_110310001	3300027908	Forest Soil	MKRENHWSLLTMVVATLAIVGTAFCLNPSSNMQYPTNADNTRPVMRSIVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEIPWKISLQ
Ga0209526_102626611	3300028047	Forest Soil	MKRENHWSLLTMVVATLAIVGTAFCLNPSSNMQYPTNADNTRPVMRSIVKVHTDHGVITMPGNADSWAAAERAVFVADSI
Ga0209526_109161722	3300028047	Forest Soil	MKRENHWALLTMVIAFLAIVGTGFCLNPSSDTQYPTNSADNSRPIKRNVVKVHTDHGVITMPGNVDSWASAERAIFVADSIADVQLANSEIPWKISLQ
Ga0308309_114662742	3300028906	Soil	MKRENQWALLTMAIGFLAIVGTGFCLNPSSNMQYRIYANNSRPVMRSVVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEIPWRISFQ
Ga0307482_10231194	3300030730	Hardwood Forest Soil	MAGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWTIALE
Ga0307482_10246703	3300030730	Hardwood Forest Soil	MKRENHWALLTMVVATLAIVGTGFCLNPSSNMQYPTNADNTHPIMRSVVKVHTDHGVITMPGNADSWAAADRAVFFADSIADVQIANSEIPWKISLQ
Ga0307482_10376783	3300030730	Hardwood Forest Soil	MKREIQWSLLTTVVATLAMVGTAFFLNPSSSAKYQPLTDESHPAVRSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWRIALE
Ga0307482_10651532	3300030730	Hardwood Forest Soil	MKREIQWSLLTIVTATLAMAGTAFCLNPSSPTNMKYQPRADESQPVERSVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADVQIANSEVPWRIALE
Ga0075374_107419781	3300030855	Soil	MKREIQWSLLTMVVATLAMVGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWDAAERAVFIADSIADLQIANSEVPWRIALE
Ga0138302_10730224	3300030937	Soil	MKREIHWSLLTTAAATLAMVGTAFCLNPSSGMQYQPAADSSRPIERSVVKVHTDHGVVTMPGNADSWDAAERAVFVADSIADMQIANSGVPWKIALE
Ga0138302_12744302	3300030937	Soil	MKREIHWYLLTMVVATLAMVGTAFCLNPSYNTNYQAVANNSVPVRRNVVKVHTEHGVVTIPGDADSWDAAERAVFVADSIADLQIANSEVPWKIAME
Ga0138302_13237221	3300030937	Soil	EEQMKREIHWYLLTTVVATLAIVGTAFCLNPSYNTTYQPIAGNSSPIKRSIIKVHTDHGVVAIPGDADTWEAAERAVFVADSIADLQMANSEVPWQIAME
Ga0138302_16545561	3300030937	Soil	SEERQMKRENHWALFTMVVATLAIVGTGFCLNPSSNTQYPTNADNTRPITRSVVKVHTDHGVITMPGNADSWTAAERAVFVADSIADVQIANSEIPWKISLQ
Ga0138302_17267061	3300030937	Soil	MTMVVATLAMVGTAFCLNPSSSTNYQPAADKSAPIVRSVVKVHTDHGVVTMPGDADSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0138301_12075682	3300031022	Soil	MKREIHWSLLTMVVATLAMVGTAFCLNPSSTKYEPSADNSAPIVRSVVKVHTDHGVVTMPGDGDSWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0138301_15385202	3300031022	Soil	MKRENHWALFTMVVATLAIVGTGFCLNPSSNTQYPTNADNTRPITRSVVKVHTDHGVITMPGNADSWTAAERAVFVADSIADVQIANSEIPWKISLQ
Ga0138301_16405282	3300031022	Soil	MKREIHWYLLTTVVATLAIVGTGFCLNPSYSTNYQPVADNSIPVKRDVVKVHTDHGVVTIPGKADSWDAAERAVFVADSIADLQIANSEVPWKIAME
Ga0170834_1013274821	3300031057	Forest Soil	MKREIQWSLLTTVAATLAMVGTAFCLNPSSSTKYQPLADESRPVARSVVKVHTDHGVVTIPGKADTWEEAERAVFVADSIADLQ
Ga0170834_1130838111	3300031057	Forest Soil	HWSLLTTAAATLAMVGTAFCLNPSSGMQYQPAADSSRPIERSVVKVHTDHGVVTMPGNADSWDAAERAVFVADSIADMQIANSGVPWKIALE
Ga0170824_1102488792	3300031231	Forest Soil	MKREIQWSLLTMVVATLAMVGTAFCLNPSSNMKYQPRTDESQPVVRSVVKVHTDHGVVTIPGEANSWEATERAVFVADSIADL
Ga0307483_10140702	3300031590	Hardwood Forest Soil	MKREIQWSLLTIVVATLAMVGTAFCLNPSSSTKYQPLADESRPVVRSVVKVHTDHGVVTIPGKADSWDATERAVFIADSIADLQIANSEVPWRIALE
Ga0307484_1034902	3300031663	Hardwood Forest Soil	MKREIQWSLLTIVVATLAMAGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWTIALE
Ga0307484_1057651	3300031663	Hardwood Forest Soil	QMKRENQWALLTMLIAFLAIVGTGFCLNPSSDTQYQSNSADNSRPIMRSVVKVHTDHGVITMPGSADSWAAADRAVFVADSIADVQIANSEIPWKISLQ
Ga0307484_1102592	3300031663	Hardwood Forest Soil	KREIHWYLLTTVVATLAIVGTAFCLNPSYSTKYQPIAGNSAPIKRSIIKVHTDHGVVAIPGDADTWEAAERAVFVADSIADLQMANSEVPWQIAME
Ga0310686_1051767383	3300031708	Soil	MKREMLWSMLTMVVATVAMIGTAFCLNYSPSMQYRVAAEDSHPIMRSVIKVHTDHGVVTIPGNADSWDAVDPAVFVADSIADLQIANSEVPWKIALQ
Ga0310686_1132033102	3300031708	Soil	MKREIQWSLLTTVAATLAIVGTAFCLNPSSSAQYRPAADNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0310686_1175902982	3300031708	Soil	MKRENQWSLLTMVIAFLTIVGTAFCLNPSSNMQYPAHAHNSRPVMRSVVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEVPWQISFE
Ga0307474_100476111	3300031718	Hardwood Forest Soil	MKREIQWSLLTIVVATLAMAGTAFCLNPSSSTKYQPLADESHPAVRSVVKVHTDHGVVTIPGKADSWDATERAVFIADSIADLQMANSEVPWTIALE
Ga0307474_101096433	3300031718	Hardwood Forest Soil	MKRENHWALLTMVVATLAIVGTGFCLNPSSNMQYPTNADNTHPIMRSVVKVHTDHGVITMPGNADSWAAADRAVFFADSIADVQIA
Ga0307474_101919773	3300031718	Hardwood Forest Soil	MKREIHWYLLTVVVATLAIVGTAFCLNPSYSTKYQPSADNSVPAKRSVVKVHTDHGVVSIPGDADSWDAAERAVFVADSIADLQIANSEVPWKIAME
Ga0307478_100209824	3300031823	Hardwood Forest Soil	MKREIQWSLLTTVVATLAMVGTAFCLNPSSSTKYQPLADESHPVVRSVVKVHTDHGVVTIPGKADSWEAAERAVFIADSIADLQMANSEVPWTIALE
Ga0307478_102669372	3300031823	Hardwood Forest Soil	MKRENQWALLTMVVATLAIVGTGFCLNPSSNTQYQSNNADNSRPIMRSVVKVHTDHGVITMPGSADSWAAADRAVFVADSIADVQIANSEIPWKISLQ
Ga0316049_1065371	3300031866	Soil	HMKREIQWSLLTTVAATLAIVGTAFCLNPSSSAQYRPAADNSRPIVRSVVKVHTDHGVVTIPGKADTWEEAERAAFVADSIADLQIANSEVPWKIALE
Ga0307479_107878422	3300031962	Hardwood Forest Soil	MKRENHWCLNHWSLLTMVVATLAIVGTAFCLNPSSNTQYPTNNVDNSGAIMRSVVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQLANSEIPWRISLQ
Ga0307470_104326421	3300032174	Hardwood Forest Soil	MKREIHWSLLTMVVATLAMVGTAFCLNPSSSTKYQPAADNSAPIVRSVVKVHTDHGVVTMPGEASTWDAAERAVFVADSIADLQIANSEVPWRIALE
Ga0348332_110230251	3300032515	Plant Litter	MKREMLWSMLTMVVATVAMIGTAFCLNYSPSMQYRVAAEDSHPIMRSVIKVHTDHGVVTIPGNADSWDAVDRAVFVADSIADLQIANSEVPWKIALQ
Ga0348332_114964002	3300032515	Plant Litter	MKRENQWSLLTMVIAFLTIVGTAFCLNPSSNMQYPAHAHNSRPVMRSVVKVHTDHGVITMPGNADSWAAAERAVFVADSIADVQIANSEIPWKISFQ
Ga0348332_123004942	3300032515	Plant Litter	MKREIQFVLSTVMIAAVAIVGPAFCLNHSPTMQYRVAGDSLPIRRSVIKVHTDHGIVTVPGNADSWDAAERAVFVADSIADMEIVNNEIPWRISVE
Ga0348332_140862082	3300032515	Plant Litter	MKSKVQFVMSTVTIAAMAIVGPAFCLNHSPAMQYRVAGDSLPVRRSVIKVHTDHGVVTMPGNADSRDAAERAVFVADSIADMEIVNNEIPWRISVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071741

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences