NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F071811

Metagenome / Metatranscriptome Family F071811

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F071811
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 50 residues
Representative Sequence MVTISNSQRDQAVRYLQALTELESDNRDIKVVNLCRLARRLAKQLEKREKK
Number of Associated Samples 22
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 30.00 %
% of genes near scaffold ends (potentially truncated) 26.45 %
% of genes from short scaffolds (< 2000 bps) 65.29 %
Associated GOLD sequencing projects 19
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (47.107 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen
(78.512 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(56.198 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.63%    β-sheet: 0.00%    Coil/Unstructured: 49.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00436SSB 24.79
PF12728HTH_17 2.48
PF13102Phage_int_SAM_5 2.48
PF13481AAA_25 1.65
PF11325DUF3127 1.65
PF01555N6_N4_Mtase 1.65
PF02796HTH_7 1.65
PF13479AAA_24 1.65
PF09588YqaJ 1.65
PF13730HTH_36 0.83
PF13392HNH_3 0.83
PF02384N6_Mtase 0.83
PF09643YopX 0.83
PF13545HTH_Crp_2 0.83
PF03237Terminase_6N 0.83
PF08299Bac_DnaA_C 0.83
PF01381HTH_3 0.83
PF00239Resolvase 0.83
PF04448DUF551 0.83
PF00574CLP_protease 0.83
PF13936HTH_38 0.83
PF08291Peptidase_M15_3 0.83
PF12844HTH_19 0.83
PF01507PAPS_reduct 0.83
PF04218CENP-B_N 0.83
PF01844HNH 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 24.79
COG2965Primosomal replication protein NReplication, recombination and repair [L] 24.79
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.65
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.65
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.65
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.65
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.65
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 0.83
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.83
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.83
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.89 %
UnclassifiedrootN/A47.11 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2077657009|BRPC3_GDEZLPW01CTGC3Not Available511Open in IMG/M
3300021254|Ga0223824_10085925Not Available2874Open in IMG/M
3300021254|Ga0223824_10144916All Organisms → Viruses → Predicted Viral2154Open in IMG/M
3300021254|Ga0223824_10373830All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300021254|Ga0223824_10572154Not Available913Open in IMG/M
3300021254|Ga0223824_10754079All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium749Open in IMG/M
3300021255|Ga0223825_10236884Not Available541Open in IMG/M
3300021255|Ga0223825_10282583All Organisms → Viruses → Predicted Viral1636Open in IMG/M
3300021255|Ga0223825_10440249Not Available648Open in IMG/M
3300021255|Ga0223825_11114772Not Available836Open in IMG/M
3300021255|Ga0223825_12313743All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus1160Open in IMG/M
3300021255|Ga0223825_12507559Not Available1666Open in IMG/M
3300021255|Ga0223825_13068618All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus1743Open in IMG/M
3300021399|Ga0224415_10106451All Organisms → Viruses → Predicted Viral2592Open in IMG/M
3300021399|Ga0224415_10266536All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300021399|Ga0224415_10686957Not Available812Open in IMG/M
3300021400|Ga0224422_11436680Not Available9541Open in IMG/M
3300021400|Ga0224422_12599119Not Available8512Open in IMG/M
3300021426|Ga0224482_10650860Not Available817Open in IMG/M
3300021426|Ga0224482_10652038Not Available816Open in IMG/M
3300021426|Ga0224482_10853894Not Available663Open in IMG/M
3300021431|Ga0224423_10001192Not Available41750Open in IMG/M
3300021431|Ga0224423_10362673Not Available1335Open in IMG/M
3300021431|Ga0224423_10463136Not Available1134Open in IMG/M
3300021431|Ga0224423_10627764Not Available914Open in IMG/M
3300024337|Ga0255060_10429628All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium661Open in IMG/M
3300024342|Ga0255061_10259934All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium899Open in IMG/M
3300024342|Ga0255061_10542390All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium610Open in IMG/M
3300024345|Ga0255062_10004357All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales4621Open in IMG/M
3300024345|Ga0255062_10516529Not Available581Open in IMG/M
3300024486|Ga0255059_10217513Not Available882Open in IMG/M
3300028591|Ga0247611_10001688All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes38660Open in IMG/M
3300028591|Ga0247611_10001880Not Available35954Open in IMG/M
3300028591|Ga0247611_10024149Not Available6378Open in IMG/M
3300028591|Ga0247611_10028087All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales5851Open in IMG/M
3300028591|Ga0247611_10044798All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales4510Open in IMG/M
3300028591|Ga0247611_10071635All Organisms → Viruses → Predicted Viral3544Open in IMG/M
3300028591|Ga0247611_10096512All Organisms → Viruses → Predicted Viral3052Open in IMG/M
3300028591|Ga0247611_10128465All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales2645Open in IMG/M
3300028591|Ga0247611_10250579All Organisms → Viruses → Predicted Viral1894Open in IMG/M
3300028591|Ga0247611_10864391All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus941Open in IMG/M
3300028591|Ga0247611_11040825Not Available837Open in IMG/M
3300028591|Ga0247611_11503320Not Available656Open in IMG/M
3300028591|Ga0247611_11526199Not Available649Open in IMG/M
3300028591|Ga0247611_11718924Not Available598Open in IMG/M
3300028591|Ga0247611_11813306Not Available576Open in IMG/M
3300028805|Ga0247608_10034920All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4652Open in IMG/M
3300028805|Ga0247608_10083529All Organisms → Viruses → Predicted Viral2993Open in IMG/M
3300028805|Ga0247608_10616642All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus1054Open in IMG/M
3300028805|Ga0247608_11015163Not Available767Open in IMG/M
3300028833|Ga0247610_10001365All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes30503Open in IMG/M
3300028833|Ga0247610_10015108All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales7687Open in IMG/M
3300028833|Ga0247610_10971399Not Available860Open in IMG/M
3300028833|Ga0247610_11372004All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus688Open in IMG/M
3300028833|Ga0247610_11470397Not Available657Open in IMG/M
3300028888|Ga0247609_10001204All Organisms → cellular organisms → Bacteria31900Open in IMG/M
3300028888|Ga0247609_10013254Not Available7612Open in IMG/M
3300028888|Ga0247609_10660528All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium1102Open in IMG/M
3300028888|Ga0247609_10938078Not Available895Open in IMG/M
3300028888|Ga0247609_11163758All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus782Open in IMG/M
3300028888|Ga0247609_11208027Not Available763Open in IMG/M
3300031760|Ga0326513_10010802Not Available6504Open in IMG/M
3300031760|Ga0326513_10021008All Organisms → Viruses → Predicted Viral4792Open in IMG/M
3300031760|Ga0326513_10144257All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2013Open in IMG/M
3300031760|Ga0326513_10244115All Organisms → Viruses → Predicted Viral1571Open in IMG/M
3300031760|Ga0326513_10261982All Organisms → Viruses → Predicted Viral1519Open in IMG/M
3300031760|Ga0326513_10263227All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus1516Open in IMG/M
3300031760|Ga0326513_10494006Not Available1101Open in IMG/M
3300031760|Ga0326513_10644252Not Available953Open in IMG/M
3300031760|Ga0326513_10652492All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium947Open in IMG/M
3300031760|Ga0326513_10657044Not Available943Open in IMG/M
3300031760|Ga0326513_10874673Not Available801Open in IMG/M
3300031760|Ga0326513_11043478All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus721Open in IMG/M
3300031760|Ga0326513_11618141Not Available548Open in IMG/M
3300031760|Ga0326513_11832503Not Available505Open in IMG/M
3300031853|Ga0326514_10568222All Organisms → Viruses → Predicted Viral1005Open in IMG/M
3300031853|Ga0326514_10822900Not Available814Open in IMG/M
3300031853|Ga0326514_10916072All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales763Open in IMG/M
3300031853|Ga0326514_11126382All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus672Open in IMG/M
3300031853|Ga0326514_11204994Not Available645Open in IMG/M
3300031853|Ga0326514_11514844Not Available556Open in IMG/M
3300031867|Ga0326511_10000446Not Available36032Open in IMG/M
3300031867|Ga0326511_10005766Not Available9765Open in IMG/M
3300031867|Ga0326511_10126377All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus2363Open in IMG/M
3300031867|Ga0326511_10152949All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium2164Open in IMG/M
3300031867|Ga0326511_10282033Not Available1619Open in IMG/M
3300031867|Ga0326511_10284159All Organisms → Viruses → Predicted Viral1613Open in IMG/M
3300031867|Ga0326511_10302715All Organisms → Viruses → Predicted Viral1564Open in IMG/M
3300031867|Ga0326511_10320504All Organisms → Viruses → Predicted Viral1520Open in IMG/M
3300031867|Ga0326511_10649186All Organisms → Viruses → Predicted Viral1049Open in IMG/M
3300031867|Ga0326511_11653678Not Available592Open in IMG/M
3300031867|Ga0326511_11852212Not Available548Open in IMG/M
3300031867|Ga0326511_11862383Not Available546Open in IMG/M
3300031867|Ga0326511_11877894All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium543Open in IMG/M
3300031992|Ga0310694_11352896All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus663Open in IMG/M
3300031992|Ga0310694_11404082Not Available646Open in IMG/M
3300031994|Ga0310691_10024573All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus5980Open in IMG/M
3300032030|Ga0310697_10149786All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus2320Open in IMG/M
3300032030|Ga0310697_10176795Not Available2145Open in IMG/M
3300032030|Ga0310697_10275793Not Available1729Open in IMG/M
3300032038|Ga0326512_10002604Not Available13334Open in IMG/M
3300032038|Ga0326512_10002726All Organisms → cellular organisms → Bacteria13071Open in IMG/M
3300032038|Ga0326512_10006204All Organisms → cellular organisms → Bacteria8637Open in IMG/M
3300032038|Ga0326512_10020062All Organisms → Viruses → Predicted Viral4929Open in IMG/M
3300032038|Ga0326512_10049159Not Available3210Open in IMG/M
3300032038|Ga0326512_10063158All Organisms → Viruses → Predicted Viral2850Open in IMG/M
3300032038|Ga0326512_10069306All Organisms → Viruses → Predicted Viral2725Open in IMG/M
3300032038|Ga0326512_10081299All Organisms → Viruses → Predicted Viral2522Open in IMG/M
3300032038|Ga0326512_10083487All Organisms → cellular organisms → Bacteria2490Open in IMG/M
3300032038|Ga0326512_10127704All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2022Open in IMG/M
3300032038|Ga0326512_10203853All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1589Open in IMG/M
3300032038|Ga0326512_10267238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → Nostoc linckia1375Open in IMG/M
3300032038|Ga0326512_10271644All Organisms → Viruses → Predicted Viral1363Open in IMG/M
3300032038|Ga0326512_10304171All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus1281Open in IMG/M
3300032038|Ga0326512_10326041All Organisms → Viruses → Predicted Viral1232Open in IMG/M
3300032038|Ga0326512_10337118All Organisms → Viruses → Predicted Viral1209Open in IMG/M
3300032038|Ga0326512_10348149All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300032038|Ga0326512_10362416Not Available1160Open in IMG/M
3300032038|Ga0326512_10737187Not Available756Open in IMG/M
3300032038|Ga0326512_10888712Not Available670Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen78.51%
Cattle And Sheep RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen20.66%
Bovine RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2077657009Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 6993Host-AssociatedOpen in IMG/M
3300021254Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021255Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021399Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021400Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021426Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021431Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assemblyHost-AssociatedOpen in IMG/M
3300024337Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300024342Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300024345Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300024486Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300028591Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300028805Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2Host-AssociatedOpen in IMG/M
3300028833Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300028888Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2Host-AssociatedOpen in IMG/M
3300031760Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518Host-AssociatedOpen in IMG/M
3300031853Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518Host-AssociatedOpen in IMG/M
3300031867Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518Host-AssociatedOpen in IMG/M
3300031992Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)Host-AssociatedOpen in IMG/M
3300031994Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300032030Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300032038Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
BRPC3_006149202077657009Bovine RumenMVTISNSQRDEAVRYLQALADTLAGDDRTQVMNLCRLARRLAKQLEKREKK
Ga0223824_1008592543300021254Cattle And Sheep RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLERREKK
Ga0223824_1014491623300021254Cattle And Sheep RumenMVTISNSQRDEAVRYLQRLADMTEGDGSLKAVNLRRLARRLAKQLEKRDKK
Ga0223824_1037383033300021254Cattle And Sheep RumenMIVISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLERKEKK
Ga0223824_1057215423300021254Cattle And Sheep RumenMVTISNSQRDQAVRYLQALADMESDNQDLRVVNLCRLARRLAKQLERKEKK
Ga0223824_1075407913300021254Cattle And Sheep RumenMVTISNSQRDQAVRYLQALTELESDNRDIKVVNLCRLARRLAKQLDKREKK
Ga0223825_1023688413300021255Cattle And Sheep RumenPSQQMVLISNSQRDEAVRYLQALADLESDNRNTRVVNLCRLARRLAKQLEKREKQ
Ga0223825_1028258343300021255Cattle And Sheep RumenMVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKREKK
Ga0223825_1044024923300021255Cattle And Sheep RumenQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLEKREKK
Ga0223825_1111477223300021255Cattle And Sheep RumenMVTISNSQRDQAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLEKREKK
Ga0223825_1231374333300021255Cattle And Sheep RumenVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKREKK
Ga0223825_1250755953300021255Cattle And Sheep RumenMIIISNKQRNDVVRYLQRLSDMTEDNGSIKAVNLRRLARRLAKQLEKKQSL
Ga0223825_1306861823300021255Cattle And Sheep RumenMVLISNSQRDEAVRYLQALADLESDNRNTRVVNLCRLARRLAKQLEKREKK
Ga0224415_1010645163300021399Cattle And Sheep RumenMIVISNSQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLERKEKK
Ga0224415_1026653613300021399Cattle And Sheep RumenMIEISNSQRDQAVRYLQALADMESDNRDIKVVNLCRLARRLAKQLERKEKK
Ga0224415_1068695723300021399Cattle And Sheep RumenMIVISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLEKRDKK
Ga0224422_11436680173300021400Cattle And Sheep RumenMVEISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLEKRDKK
Ga0224422_1259911963300021400Cattle And Sheep RumenMVTISNSQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLERREKK
Ga0224482_1065086023300021426Cattle And Sheep RumenMVTISNSQRDQAVRYLQALADLGSDNRDLRVVNLCRLARRLAKQLERKEKK
Ga0224482_1065203833300021426Cattle And Sheep RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLNKREQQ
Ga0224482_1085389413300021426Cattle And Sheep RumenMIVISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLSRRLAKQLERKEKK
Ga0224482_1100920913300021426Cattle And Sheep RumenVRYLQPLADLGSDNRDLRVVNLCRLARRLAKQLEKREKK
Ga0224423_10001192513300021431Cattle And Sheep RumenMVTISNSQRDQAVRYLQALAELENDNRDLRVVNLCRLARRLAKQLEKRDKK
Ga0224423_1036267323300021431Cattle And Sheep RumenMVLISNSQRDEAVRYLQALADLESDNPNTRVVNLCRLARRLAKQLEKREKQ
Ga0224423_1046313633300021431Cattle And Sheep RumenMIVISNSQRDQAVRYLQALADMESDNQDLRVVNLCRLARRLAKQLERKEKK
Ga0224423_1062776423300021431Cattle And Sheep RumenMIEISNSQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLERKEKK
Ga0255060_1042962823300024337RumenMVEISNAQRDQAVRYLQALADLESDNRDMKVVNLCRLSRRLAKQLEKRVKK
Ga0255061_1025993433300024342RumenMVTISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLARRLAKQLE
Ga0255061_1054239023300024342RumenMVVISNAQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQL
Ga0255062_1000435733300024345RumenMVTISNSQRDQAVRYLQALAKLMESDNRTKVVNLCRLSRRLAKQLERREKK
Ga0255062_1051652933300024345RumenMVTISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLNKRE
Ga0255059_1021751323300024486RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARKLAKQLEKREKK
Ga0247611_10001688293300028591RumenMVTISNSQRDQAVRYLQALAELESDNREIKVVNLCRLARRLAKQLEKREKK
Ga0247611_10001880283300028591RumenMVLISNSQRDEAVRYLQALADLESDNRDLKVVNLCRLSRRLAKQLKKKQSL
Ga0247611_1002414973300028591RumenVAEEPSQQMVTISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLNKREKQ
Ga0247611_1002808723300028591RumenMVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKRDKK
Ga0247611_1004479853300028591RumenMVTISNSQRDQAVRYLQALADMMESDNRTKVVNLCRLSRRLAKQLAKRETR
Ga0247611_1007163523300028591RumenMVVISNAQRDQAVRYLQALADLESDNQSTRVVNLCRLSRRLAKQLEKREKR
Ga0247611_1009651243300028591RumenMVTISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLARRLAKQLEKREKR
Ga0247611_1012846523300028591RumenMVTISNSQRDQAVRYLQALAELESDNLEIKVVNLVRLSRRLAKQLAKREKK
Ga0247611_1025057913300028591RumenQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ
Ga0247611_1086439133300028591RumenMVTISNSQRDQAVRYLQALTELESDNRDIKVVNLCRLARRLAKQLEKREKK
Ga0247611_1104082523300028591RumenMVEISNSQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLEKRVKK
Ga0247611_1150332013300028591RumenTEERTPRVAEEPSQQMVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLNKREKK
Ga0247611_1152619913300028591RumenMVEISNAQLDQAVRYLQALADLESDNRDMKVVNLCRLSRRLAKQLEKREKR
Ga0247611_1171892423300028591RumenMVVISNSQRDQAVRYLQALIELESDNRDIKVVNLCRLARRLAKQLDKREKK
Ga0247611_1181330613300028591RumenMVEISNSQRDEAVRYLQALADLESDNRDLRVVNLCRLARRLAKQLE
Ga0247608_1003492023300028805RumenMVEISNSQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLERREKK
Ga0247608_1008352913300028805RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLNKRE
Ga0247608_1061664223300028805RumenMVEISNAQRDQAVRYLQALADLESDNRDMKVVNLCRLSRRLAKQLEKREKR
Ga0247608_1101516313300028805RumenSQQMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLEKREKK
Ga0247610_10001365323300028833RumenMVTISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLEKRDKK
Ga0247610_1001510833300028833RumenMVVISNAQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ
Ga0247610_1097139923300028833RumenMVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLEKRVKK
Ga0247610_1137200423300028833RumenQGDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ
Ga0247610_1147039723300028833RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLSRRLAKQLERREKK
Ga0247609_10001204393300028888RumenMIEISNSQRDQAVRYLQALAQLMESDDRTKVVNLCRLSRRLARQLEKREKK
Ga0247609_10013254103300028888RumenMILISNSQRDEAVRYLQALADLESDNRDLKVVNLCRLSRRLAKQLKKKQSL
Ga0247609_1066052823300028888RumenMVTISNSQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLERREKK
Ga0247609_1093807823300028888RumenMVTISNSQRDQAVRYLQALAQLMESDNLTKVVNLCRLSRRLAKQLEKREKK
Ga0247609_1116375823300028888RumenQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLEKREKR
Ga0247609_1120802723300028888RumenLPGGFRRLMVTISNSQRDEAVRYLHTFTALMGGDDRTKVKNLCRLARRLAK
Ga0326513_1001080243300031760RumenMVEISNAQRDEAVRYLQALSSLMDGDDRTRVINLCRLARRLAKQLEKREKK
Ga0326513_1002100833300031760RumenMRDEAVRYLQALADQVSDNRNTRVVNLCRLARRLAKQLNKREKQ
Ga0326513_1014425733300031760RumenQTTSKTLLFELMIEISNSQRDQAVRYLQAFTELMGSDNRTKVVNLCRLSRRLAKQLERREKK
Ga0326513_1024411513300031760RumenMVEISNRMRDEAVKYLQALADISSSDDRTQVMNLCRLARRLAKQLS
Ga0326513_1026198243300031760RumenMVLISNSQRDEAVRYLQALADLESDNRNTKVVNLCRLARRLAKQLEKREKK
Ga0326513_1026322723300031760RumenMVEISNKQRDEAVRYLQHLCSLVQGDDLRVVNLRRLAMRLADKLAKKEKR
Ga0326513_1049400623300031760RumenMVEISNAQRAEAVRYLQALSSLMDGDDRTRVINLCRLARRLAKQLERRETK
Ga0326513_1064425213300031760RumenTILSMVVISNAQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ
Ga0326513_1065249213300031760RumenMILISNSQRDEAVRYLQRFADLTESVTENDGNLKVVNLCRLSRRLAKQLKKKQSL
Ga0326513_1065704413300031760RumenQTASKTLLFELMIEISNSQRDQAVRYLQAFTELMGNDNRLKVVNLCRLSRRLAKQLEKREKK
Ga0326513_1087467323300031760RumenMIEISNSQRDQAVRYLQALAHLMESDNRTKVVNLCRLSRRLAKQLERREKK
Ga0326513_1104347823300031760RumenMVEISNSQRDEAVRYLQAFAQLNASDDRTRVVNLCRLARRLARQLAKRKKTT
Ga0326513_1161814123300031760RumenMVTISNSQRDEAVRYLQALADTLAGDDRTQVMNLCRLARRLAKQLQRREKK
Ga0326513_1183250323300031760RumenMVVISNSQRDQAVRYLQALADLESDNREIKVVNLVRLSRKLAKQLAKREKK
Ga0326514_1056822223300031853RumenMVTISNSQRDEAVRYLQALADLESDNRDLKVVNLVRLARRLAKQLEKRVKK
Ga0326514_1082290023300031853RumenMIEISNSQRDQAVRYLQAFTELMGNDNRTKVVNLCRLSRRLAKQLEKREKK
Ga0326514_1091607223300031853RumenMVVISNSQRDEAVRYLQRLADLTEGDGSIKAVNLRRLARRLARKLAEKQSQ
Ga0326514_1112638223300031853RumenMVLISNSMRDEAVRYLQALADQVSDNRNTRVVNLCRLARRLAKQLNKREKQ
Ga0326514_1120499423300031853RumenMVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLDKREKK
Ga0326514_1151484413300031853RumenMVTISNSQRDEAVRYLQAFAQLNASDDRTRVVNLCRLARRLAR
Ga0326511_10000446343300031867RumenMILISNSQRDEAVRYLQALADLESDNRDLKVVNLCRLARRLAKQLKKKQSL
Ga0326511_1000576683300031867RumenMVVISNRQRDEAVRYLQALTDLESDNRNTRVVNLCRLARRLARQLEQRDKK
Ga0326511_1012637753300031867RumenLISNSQRDEAVRYLQALADLESDNRNTRVVNLCRLARRLAKQLEKREKK
Ga0326511_1015294943300031867RumenMVVISNSQRDEAVRYLQRLADMTEGDGSIKAVNLRRLARRLARKLAEKQSQ
Ga0326511_1028203333300031867RumenMRDEAVRYLQALADQVSDNRNTRVVNLCRLARRLAKQLEKREKK
Ga0326511_1028415913300031867RumenMVEISNSQRDEAVRYLQALADLESDNRDLKVVNLVRLARRLAKQL
Ga0326511_1030271543300031867RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLEKREKK
Ga0326511_1032050433300031867RumenMVEISNSQRDQAVRYLQAFTELMGSDNRTKVVNLCRLSRRLAKQLERREKK
Ga0326511_1064918623300031867RumenMIEISNSQRDQAVRYLQAFTELMGSDNRTKVVNLCRLSRRLAKQLEKREKK
Ga0326511_1165367823300031867RumenMIEISNSQRDQAVRYLQAFTELMGNDNRTKVVNLCRLSRRLAKQLERREKK
Ga0326511_1185221223300031867RumenMVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQ
Ga0326511_1186238323300031867RumenMVEISNSQRDQAVRYLQALAKLMESDNRTKVVNLCRLSRRLAKQLEKREKK
Ga0326511_1187789423300031867RumenMVVISNAQRDQAVRYLQALADLESDNQSTRVVNLCRLSRRLARQLE
Ga0310694_1135289613300031992RumenISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKREKK
Ga0310694_1140408223300031992RumenRTAILMVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLEKRVKK
Ga0310691_1002457333300031994RumenMVTISNSQRDQAVRYLQALADQVSGNRDLRVVNLCRLARRLAKQLEKREKK
Ga0310697_1014978633300032030RumenMIEISNSQRDQAVRYLQAFTELMGNDNRLKVVNLCRLSRRLAKQLEKREKK
Ga0310697_1017679513300032030RumenMVTISNSQRDEAVRYLQALAQLMESDNRTKVVNLCRLSRRLAKQLEKREKK
Ga0310697_1027579323300032030RumenMVTISNSQRDEAVRYLHTFTALMGGDDRTKVKNLCRLARRLAK
Ga0326512_10002604233300032038RumenMVTISNEQRDQAVRYLQALADLESGNQSTRVANLVRLARKLAKQLEQRQKK
Ga0326512_1000272623300032038RumenMVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLDKREKK
Ga0326512_1000620473300032038RumenMVEISNSQRDQAVRYLQVFADMMDNNRDIKVVNICRLARRLAKQLEKREKK
Ga0326512_1002006273300032038RumenMVEISNSQRDEAVRYLQALADTLAGDDRTQVMNLCRLARRLAKQLEKREKK
Ga0326512_1004915943300032038RumenMITISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLARRLAKQLERREKK
Ga0326512_1006315893300032038RumenMIEISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLDKREKK
Ga0326512_1006930653300032038RumenMVTISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLSRRLAKQLEKRQKK
Ga0326512_1008129923300032038RumenMVTISNSQRDQAVRYLQAFTELESDNRDIKVVNLCRLARRLAKQLDKREKK
Ga0326512_1008348743300032038RumenMILISNNQRDEAVRYLQALADLESDNRDLKVVNLCRLARRLAKQLKKKQSL
Ga0326512_1012770433300032038RumenMIEISNSQRDQAVRYLQALSALMEGDDRTKVVNLCRLSRRLAKQLEKREKK
Ga0326512_1020385313300032038RumenMVLISNSQRDEAVRYLQALADLESDNRNTKVVNLCRLARRLAKQ
Ga0326512_1026723833300032038RumenISNSQRDQAVRYLQALAQLMESDNRTKVVNLCRLSRRLAKQLEKREKK
Ga0326512_1027164413300032038RumenMVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLA
Ga0326512_1030417123300032038RumenMVEISNAQRAEAVRYLQALSSLMDGDDRTRVMNLCRLARRLAKQLEKREVK
Ga0326512_1032604143300032038RumenMVTISNSQRDQAVRYLQALADLESDNRDIKVVNLCRLARRLAKQLEKRVKK
Ga0326512_1033711823300032038RumenMVTISNSQRDQAVRYLQALAKLMESDNRTKVVNLCRLSRRLAKQLEKRDKK
Ga0326512_1034814913300032038RumenMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAYQ
Ga0326512_1036241623300032038RumenMIEISNSQRDEAVRYLQRLADMTEGDGSLKAVNLRRLARRLAKQLEKREKK
Ga0326512_1073718733300032038RumenMIEISNSQRDEAVRYLQAFTELMGNDNRTKVVNLCRLSRRLAKQLEKRQKK
Ga0326512_1088871223300032038RumenTRTLEMVVISNRQRDEAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLEQRDKK


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