Basic Information | |
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Family ID | F071811 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 121 |
Average Sequence Length | 50 residues |
Representative Sequence | MVTISNSQRDQAVRYLQALTELESDNRDIKVVNLCRLARRLAKQLEKREKK |
Number of Associated Samples | 22 |
Number of Associated Scaffolds | 121 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 30.00 % |
% of genes near scaffold ends (potentially truncated) | 26.45 % |
% of genes from short scaffolds (< 2000 bps) | 65.29 % |
Associated GOLD sequencing projects | 19 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.38 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (47.107 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (78.512 % of family members) |
Environment Ontology (ENVO) | Unclassified (100.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut (56.198 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 50.63% β-sheet: 0.00% Coil/Unstructured: 49.37% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 121 Family Scaffolds |
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PF00436 | SSB | 24.79 |
PF12728 | HTH_17 | 2.48 |
PF13102 | Phage_int_SAM_5 | 2.48 |
PF13481 | AAA_25 | 1.65 |
PF11325 | DUF3127 | 1.65 |
PF01555 | N6_N4_Mtase | 1.65 |
PF02796 | HTH_7 | 1.65 |
PF13479 | AAA_24 | 1.65 |
PF09588 | YqaJ | 1.65 |
PF13730 | HTH_36 | 0.83 |
PF13392 | HNH_3 | 0.83 |
PF02384 | N6_Mtase | 0.83 |
PF09643 | YopX | 0.83 |
PF13545 | HTH_Crp_2 | 0.83 |
PF03237 | Terminase_6N | 0.83 |
PF08299 | Bac_DnaA_C | 0.83 |
PF01381 | HTH_3 | 0.83 |
PF00239 | Resolvase | 0.83 |
PF04448 | DUF551 | 0.83 |
PF00574 | CLP_protease | 0.83 |
PF13936 | HTH_38 | 0.83 |
PF08291 | Peptidase_M15_3 | 0.83 |
PF12844 | HTH_19 | 0.83 |
PF01507 | PAPS_reduct | 0.83 |
PF04218 | CENP-B_N | 0.83 |
PF01844 | HNH | 0.83 |
COG ID | Name | Functional Category | % Frequency in 121 Family Scaffolds |
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COG0629 | Single-stranded DNA-binding protein | Replication, recombination and repair [L] | 24.79 |
COG2965 | Primosomal replication protein N | Replication, recombination and repair [L] | 24.79 |
COG0616 | Periplasmic serine protease, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 1.65 |
COG0740 | ATP-dependent protease ClpP, protease subunit | Posttranslational modification, protein turnover, chaperones [O] | 1.65 |
COG0863 | DNA modification methylase | Replication, recombination and repair [L] | 1.65 |
COG1041 | tRNA G10 N-methylase Trm11 | Translation, ribosomal structure and biogenesis [J] | 1.65 |
COG2189 | Adenine specific DNA methylase Mod | Replication, recombination and repair [L] | 1.65 |
COG0593 | Chromosomal replication initiation ATPase DnaA | Replication, recombination and repair [L] | 0.83 |
COG1030 | Membrane-bound serine protease NfeD, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 0.83 |
COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 0.83 |
COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 0.83 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 52.89 % |
Unclassified | root | N/A | 47.11 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2077657009|BRPC3_GDEZLPW01CTGC3 | Not Available | 511 | Open in IMG/M |
3300021254|Ga0223824_10085925 | Not Available | 2874 | Open in IMG/M |
3300021254|Ga0223824_10144916 | All Organisms → Viruses → Predicted Viral | 2154 | Open in IMG/M |
3300021254|Ga0223824_10373830 | All Organisms → Viruses → Predicted Viral | 1217 | Open in IMG/M |
3300021254|Ga0223824_10572154 | Not Available | 913 | Open in IMG/M |
3300021254|Ga0223824_10754079 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 749 | Open in IMG/M |
3300021255|Ga0223825_10236884 | Not Available | 541 | Open in IMG/M |
3300021255|Ga0223825_10282583 | All Organisms → Viruses → Predicted Viral | 1636 | Open in IMG/M |
3300021255|Ga0223825_10440249 | Not Available | 648 | Open in IMG/M |
3300021255|Ga0223825_11114772 | Not Available | 836 | Open in IMG/M |
3300021255|Ga0223825_12313743 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 1160 | Open in IMG/M |
3300021255|Ga0223825_12507559 | Not Available | 1666 | Open in IMG/M |
3300021255|Ga0223825_13068618 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 1743 | Open in IMG/M |
3300021399|Ga0224415_10106451 | All Organisms → Viruses → Predicted Viral | 2592 | Open in IMG/M |
3300021399|Ga0224415_10266536 | All Organisms → cellular organisms → Bacteria | 1536 | Open in IMG/M |
3300021399|Ga0224415_10686957 | Not Available | 812 | Open in IMG/M |
3300021400|Ga0224422_11436680 | Not Available | 9541 | Open in IMG/M |
3300021400|Ga0224422_12599119 | Not Available | 8512 | Open in IMG/M |
3300021426|Ga0224482_10650860 | Not Available | 817 | Open in IMG/M |
3300021426|Ga0224482_10652038 | Not Available | 816 | Open in IMG/M |
3300021426|Ga0224482_10853894 | Not Available | 663 | Open in IMG/M |
3300021431|Ga0224423_10001192 | Not Available | 41750 | Open in IMG/M |
3300021431|Ga0224423_10362673 | Not Available | 1335 | Open in IMG/M |
3300021431|Ga0224423_10463136 | Not Available | 1134 | Open in IMG/M |
3300021431|Ga0224423_10627764 | Not Available | 914 | Open in IMG/M |
3300024337|Ga0255060_10429628 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 661 | Open in IMG/M |
3300024342|Ga0255061_10259934 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 899 | Open in IMG/M |
3300024342|Ga0255061_10542390 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 610 | Open in IMG/M |
3300024345|Ga0255062_10004357 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 4621 | Open in IMG/M |
3300024345|Ga0255062_10516529 | Not Available | 581 | Open in IMG/M |
3300024486|Ga0255059_10217513 | Not Available | 882 | Open in IMG/M |
3300028591|Ga0247611_10001688 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 38660 | Open in IMG/M |
3300028591|Ga0247611_10001880 | Not Available | 35954 | Open in IMG/M |
3300028591|Ga0247611_10024149 | Not Available | 6378 | Open in IMG/M |
3300028591|Ga0247611_10028087 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 5851 | Open in IMG/M |
3300028591|Ga0247611_10044798 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 4510 | Open in IMG/M |
3300028591|Ga0247611_10071635 | All Organisms → Viruses → Predicted Viral | 3544 | Open in IMG/M |
3300028591|Ga0247611_10096512 | All Organisms → Viruses → Predicted Viral | 3052 | Open in IMG/M |
3300028591|Ga0247611_10128465 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 2645 | Open in IMG/M |
3300028591|Ga0247611_10250579 | All Organisms → Viruses → Predicted Viral | 1894 | Open in IMG/M |
3300028591|Ga0247611_10864391 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 941 | Open in IMG/M |
3300028591|Ga0247611_11040825 | Not Available | 837 | Open in IMG/M |
3300028591|Ga0247611_11503320 | Not Available | 656 | Open in IMG/M |
3300028591|Ga0247611_11526199 | Not Available | 649 | Open in IMG/M |
3300028591|Ga0247611_11718924 | Not Available | 598 | Open in IMG/M |
3300028591|Ga0247611_11813306 | Not Available | 576 | Open in IMG/M |
3300028805|Ga0247608_10034920 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 4652 | Open in IMG/M |
3300028805|Ga0247608_10083529 | All Organisms → Viruses → Predicted Viral | 2993 | Open in IMG/M |
3300028805|Ga0247608_10616642 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 1054 | Open in IMG/M |
3300028805|Ga0247608_11015163 | Not Available | 767 | Open in IMG/M |
3300028833|Ga0247610_10001365 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 30503 | Open in IMG/M |
3300028833|Ga0247610_10015108 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 7687 | Open in IMG/M |
3300028833|Ga0247610_10971399 | Not Available | 860 | Open in IMG/M |
3300028833|Ga0247610_11372004 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 688 | Open in IMG/M |
3300028833|Ga0247610_11470397 | Not Available | 657 | Open in IMG/M |
3300028888|Ga0247609_10001204 | All Organisms → cellular organisms → Bacteria | 31900 | Open in IMG/M |
3300028888|Ga0247609_10013254 | Not Available | 7612 | Open in IMG/M |
3300028888|Ga0247609_10660528 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 1102 | Open in IMG/M |
3300028888|Ga0247609_10938078 | Not Available | 895 | Open in IMG/M |
3300028888|Ga0247609_11163758 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 782 | Open in IMG/M |
3300028888|Ga0247609_11208027 | Not Available | 763 | Open in IMG/M |
3300031760|Ga0326513_10010802 | Not Available | 6504 | Open in IMG/M |
3300031760|Ga0326513_10021008 | All Organisms → Viruses → Predicted Viral | 4792 | Open in IMG/M |
3300031760|Ga0326513_10144257 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 2013 | Open in IMG/M |
3300031760|Ga0326513_10244115 | All Organisms → Viruses → Predicted Viral | 1571 | Open in IMG/M |
3300031760|Ga0326513_10261982 | All Organisms → Viruses → Predicted Viral | 1519 | Open in IMG/M |
3300031760|Ga0326513_10263227 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 1516 | Open in IMG/M |
3300031760|Ga0326513_10494006 | Not Available | 1101 | Open in IMG/M |
3300031760|Ga0326513_10644252 | Not Available | 953 | Open in IMG/M |
3300031760|Ga0326513_10652492 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 947 | Open in IMG/M |
3300031760|Ga0326513_10657044 | Not Available | 943 | Open in IMG/M |
3300031760|Ga0326513_10874673 | Not Available | 801 | Open in IMG/M |
3300031760|Ga0326513_11043478 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 721 | Open in IMG/M |
3300031760|Ga0326513_11618141 | Not Available | 548 | Open in IMG/M |
3300031760|Ga0326513_11832503 | Not Available | 505 | Open in IMG/M |
3300031853|Ga0326514_10568222 | All Organisms → Viruses → Predicted Viral | 1005 | Open in IMG/M |
3300031853|Ga0326514_10822900 | Not Available | 814 | Open in IMG/M |
3300031853|Ga0326514_10916072 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 763 | Open in IMG/M |
3300031853|Ga0326514_11126382 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 672 | Open in IMG/M |
3300031853|Ga0326514_11204994 | Not Available | 645 | Open in IMG/M |
3300031853|Ga0326514_11514844 | Not Available | 556 | Open in IMG/M |
3300031867|Ga0326511_10000446 | Not Available | 36032 | Open in IMG/M |
3300031867|Ga0326511_10005766 | Not Available | 9765 | Open in IMG/M |
3300031867|Ga0326511_10126377 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 2363 | Open in IMG/M |
3300031867|Ga0326511_10152949 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 2164 | Open in IMG/M |
3300031867|Ga0326511_10282033 | Not Available | 1619 | Open in IMG/M |
3300031867|Ga0326511_10284159 | All Organisms → Viruses → Predicted Viral | 1613 | Open in IMG/M |
3300031867|Ga0326511_10302715 | All Organisms → Viruses → Predicted Viral | 1564 | Open in IMG/M |
3300031867|Ga0326511_10320504 | All Organisms → Viruses → Predicted Viral | 1520 | Open in IMG/M |
3300031867|Ga0326511_10649186 | All Organisms → Viruses → Predicted Viral | 1049 | Open in IMG/M |
3300031867|Ga0326511_11653678 | Not Available | 592 | Open in IMG/M |
3300031867|Ga0326511_11852212 | Not Available | 548 | Open in IMG/M |
3300031867|Ga0326511_11862383 | Not Available | 546 | Open in IMG/M |
3300031867|Ga0326511_11877894 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → unclassified Porphyromonadaceae → Porphyromonadaceae bacterium | 543 | Open in IMG/M |
3300031992|Ga0310694_11352896 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 663 | Open in IMG/M |
3300031992|Ga0310694_11404082 | Not Available | 646 | Open in IMG/M |
3300031994|Ga0310691_10024573 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 5980 | Open in IMG/M |
3300032030|Ga0310697_10149786 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 2320 | Open in IMG/M |
3300032030|Ga0310697_10176795 | Not Available | 2145 | Open in IMG/M |
3300032030|Ga0310697_10275793 | Not Available | 1729 | Open in IMG/M |
3300032038|Ga0326512_10002604 | Not Available | 13334 | Open in IMG/M |
3300032038|Ga0326512_10002726 | All Organisms → cellular organisms → Bacteria | 13071 | Open in IMG/M |
3300032038|Ga0326512_10006204 | All Organisms → cellular organisms → Bacteria | 8637 | Open in IMG/M |
3300032038|Ga0326512_10020062 | All Organisms → Viruses → Predicted Viral | 4929 | Open in IMG/M |
3300032038|Ga0326512_10049159 | Not Available | 3210 | Open in IMG/M |
3300032038|Ga0326512_10063158 | All Organisms → Viruses → Predicted Viral | 2850 | Open in IMG/M |
3300032038|Ga0326512_10069306 | All Organisms → Viruses → Predicted Viral | 2725 | Open in IMG/M |
3300032038|Ga0326512_10081299 | All Organisms → Viruses → Predicted Viral | 2522 | Open in IMG/M |
3300032038|Ga0326512_10083487 | All Organisms → cellular organisms → Bacteria | 2490 | Open in IMG/M |
3300032038|Ga0326512_10127704 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 2022 | Open in IMG/M |
3300032038|Ga0326512_10203853 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 1589 | Open in IMG/M |
3300032038|Ga0326512_10267238 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → Nostoc linckia | 1375 | Open in IMG/M |
3300032038|Ga0326512_10271644 | All Organisms → Viruses → Predicted Viral | 1363 | Open in IMG/M |
3300032038|Ga0326512_10304171 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus | 1281 | Open in IMG/M |
3300032038|Ga0326512_10326041 | All Organisms → Viruses → Predicted Viral | 1232 | Open in IMG/M |
3300032038|Ga0326512_10337118 | All Organisms → Viruses → Predicted Viral | 1209 | Open in IMG/M |
3300032038|Ga0326512_10348149 | All Organisms → Viruses → Predicted Viral | 1187 | Open in IMG/M |
3300032038|Ga0326512_10362416 | Not Available | 1160 | Open in IMG/M |
3300032038|Ga0326512_10737187 | Not Available | 756 | Open in IMG/M |
3300032038|Ga0326512_10888712 | Not Available | 670 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen | 78.51% |
Cattle And Sheep Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen | 20.66% |
Bovine Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen | 0.83% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2077657009 | Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 6993 | Host-Associated | Open in IMG/M |
3300021254 | Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly | Host-Associated | Open in IMG/M |
3300021255 | Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly | Host-Associated | Open in IMG/M |
3300021399 | Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly | Host-Associated | Open in IMG/M |
3300021400 | Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly | Host-Associated | Open in IMG/M |
3300021426 | Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly | Host-Associated | Open in IMG/M |
3300021431 | Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly | Host-Associated | Open in IMG/M |
3300024337 | Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300024342 | Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300024345 | Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300024486 | Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300028591 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2 | Host-Associated | Open in IMG/M |
3300028805 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 | Host-Associated | Open in IMG/M |
3300028833 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 | Host-Associated | Open in IMG/M |
3300028888 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 | Host-Associated | Open in IMG/M |
3300031760 | Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518 | Host-Associated | Open in IMG/M |
3300031853 | Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518 | Host-Associated | Open in IMG/M |
3300031867 | Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518 | Host-Associated | Open in IMG/M |
3300031992 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2) | Host-Associated | Open in IMG/M |
3300031994 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2) | Host-Associated | Open in IMG/M |
3300032030 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2) | Host-Associated | Open in IMG/M |
3300032038 | Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
BRPC3_00614920 | 2077657009 | Bovine Rumen | MVTISNSQRDEAVRYLQALADTLAGDDRTQVMNLCRLARRLAKQLEKREKK |
Ga0223824_100859254 | 3300021254 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLERREKK |
Ga0223824_101449162 | 3300021254 | Cattle And Sheep Rumen | MVTISNSQRDEAVRYLQRLADMTEGDGSLKAVNLRRLARRLAKQLEKRDKK |
Ga0223824_103738303 | 3300021254 | Cattle And Sheep Rumen | MIVISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLERKEKK |
Ga0223824_105721542 | 3300021254 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQALADMESDNQDLRVVNLCRLARRLAKQLERKEKK |
Ga0223824_107540791 | 3300021254 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQALTELESDNRDIKVVNLCRLARRLAKQLDKREKK |
Ga0223825_102368841 | 3300021255 | Cattle And Sheep Rumen | PSQQMVLISNSQRDEAVRYLQALADLESDNRNTRVVNLCRLARRLAKQLEKREKQ |
Ga0223825_102825834 | 3300021255 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKREKK |
Ga0223825_104402492 | 3300021255 | Cattle And Sheep Rumen | QRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLEKREKK |
Ga0223825_111147722 | 3300021255 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLEKREKK |
Ga0223825_123137433 | 3300021255 | Cattle And Sheep Rumen | VTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKREKK |
Ga0223825_125075595 | 3300021255 | Cattle And Sheep Rumen | MIIISNKQRNDVVRYLQRLSDMTEDNGSIKAVNLRRLARRLAKQLEKKQSL |
Ga0223825_130686182 | 3300021255 | Cattle And Sheep Rumen | MVLISNSQRDEAVRYLQALADLESDNRNTRVVNLCRLARRLAKQLEKREKK |
Ga0224415_101064516 | 3300021399 | Cattle And Sheep Rumen | MIVISNSQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLERKEKK |
Ga0224415_102665361 | 3300021399 | Cattle And Sheep Rumen | MIEISNSQRDQAVRYLQALADMESDNRDIKVVNLCRLARRLAKQLERKEKK |
Ga0224415_106869572 | 3300021399 | Cattle And Sheep Rumen | MIVISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLEKRDKK |
Ga0224422_1143668017 | 3300021400 | Cattle And Sheep Rumen | MVEISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLEKRDKK |
Ga0224422_125991196 | 3300021400 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLERREKK |
Ga0224482_106508602 | 3300021426 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQALADLGSDNRDLRVVNLCRLARRLAKQLERKEKK |
Ga0224482_106520383 | 3300021426 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLNKREQQ |
Ga0224482_108538941 | 3300021426 | Cattle And Sheep Rumen | MIVISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLSRRLAKQLERKEKK |
Ga0224482_110092091 | 3300021426 | Cattle And Sheep Rumen | VRYLQPLADLGSDNRDLRVVNLCRLARRLAKQLEKREKK |
Ga0224423_1000119251 | 3300021431 | Cattle And Sheep Rumen | MVTISNSQRDQAVRYLQALAELENDNRDLRVVNLCRLARRLAKQLEKRDKK |
Ga0224423_103626732 | 3300021431 | Cattle And Sheep Rumen | MVLISNSQRDEAVRYLQALADLESDNPNTRVVNLCRLARRLAKQLEKREKQ |
Ga0224423_104631363 | 3300021431 | Cattle And Sheep Rumen | MIVISNSQRDQAVRYLQALADMESDNQDLRVVNLCRLARRLAKQLERKEKK |
Ga0224423_106277642 | 3300021431 | Cattle And Sheep Rumen | MIEISNSQRDQAVRYLQALADMESDNRDLRVVNLCRLARRLAKQLERKEKK |
Ga0255060_104296282 | 3300024337 | Rumen | MVEISNAQRDQAVRYLQALADLESDNRDMKVVNLCRLSRRLAKQLEKRVKK |
Ga0255061_102599343 | 3300024342 | Rumen | MVTISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLARRLAKQLE |
Ga0255061_105423902 | 3300024342 | Rumen | MVVISNAQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQL |
Ga0255062_100043573 | 3300024345 | Rumen | MVTISNSQRDQAVRYLQALAKLMESDNRTKVVNLCRLSRRLAKQLERREKK |
Ga0255062_105165293 | 3300024345 | Rumen | MVTISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLNKRE |
Ga0255059_102175132 | 3300024486 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARKLAKQLEKREKK |
Ga0247611_1000168829 | 3300028591 | Rumen | MVTISNSQRDQAVRYLQALAELESDNREIKVVNLCRLARRLAKQLEKREKK |
Ga0247611_1000188028 | 3300028591 | Rumen | MVLISNSQRDEAVRYLQALADLESDNRDLKVVNLCRLSRRLAKQLKKKQSL |
Ga0247611_100241497 | 3300028591 | Rumen | VAEEPSQQMVTISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLNKREKQ |
Ga0247611_100280872 | 3300028591 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKRDKK |
Ga0247611_100447985 | 3300028591 | Rumen | MVTISNSQRDQAVRYLQALADMMESDNRTKVVNLCRLSRRLAKQLAKRETR |
Ga0247611_100716352 | 3300028591 | Rumen | MVVISNAQRDQAVRYLQALADLESDNQSTRVVNLCRLSRRLAKQLEKREKR |
Ga0247611_100965124 | 3300028591 | Rumen | MVTISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLARRLAKQLEKREKR |
Ga0247611_101284652 | 3300028591 | Rumen | MVTISNSQRDQAVRYLQALAELESDNLEIKVVNLVRLSRRLAKQLAKREKK |
Ga0247611_102505791 | 3300028591 | Rumen | QRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ |
Ga0247611_108643913 | 3300028591 | Rumen | MVTISNSQRDQAVRYLQALTELESDNRDIKVVNLCRLARRLAKQLEKREKK |
Ga0247611_110408252 | 3300028591 | Rumen | MVEISNSQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLEKRVKK |
Ga0247611_115033201 | 3300028591 | Rumen | TEERTPRVAEEPSQQMVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLNKREKK |
Ga0247611_115261991 | 3300028591 | Rumen | MVEISNAQLDQAVRYLQALADLESDNRDMKVVNLCRLSRRLAKQLEKREKR |
Ga0247611_117189242 | 3300028591 | Rumen | MVVISNSQRDQAVRYLQALIELESDNRDIKVVNLCRLARRLAKQLDKREKK |
Ga0247611_118133061 | 3300028591 | Rumen | MVEISNSQRDEAVRYLQALADLESDNRDLRVVNLCRLARRLAKQLE |
Ga0247608_100349202 | 3300028805 | Rumen | MVEISNSQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLERREKK |
Ga0247608_100835291 | 3300028805 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLNKRE |
Ga0247608_106166422 | 3300028805 | Rumen | MVEISNAQRDQAVRYLQALADLESDNRDMKVVNLCRLSRRLAKQLEKREKR |
Ga0247608_110151631 | 3300028805 | Rumen | SQQMVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLEKREKK |
Ga0247610_1000136532 | 3300028833 | Rumen | MVTISNSQRDQAVRYLQAFTELENGNRDIKVVNLCRLARRLAKQLEKRDKK |
Ga0247610_100151083 | 3300028833 | Rumen | MVVISNAQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ |
Ga0247610_109713992 | 3300028833 | Rumen | MVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLEKRVKK |
Ga0247610_113720042 | 3300028833 | Rumen | QGDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ |
Ga0247610_114703972 | 3300028833 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLSRRLAKQLERREKK |
Ga0247609_1000120439 | 3300028888 | Rumen | MIEISNSQRDQAVRYLQALAQLMESDDRTKVVNLCRLSRRLARQLEKREKK |
Ga0247609_1001325410 | 3300028888 | Rumen | MILISNSQRDEAVRYLQALADLESDNRDLKVVNLCRLSRRLAKQLKKKQSL |
Ga0247609_106605282 | 3300028888 | Rumen | MVTISNSQRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLERREKK |
Ga0247609_109380782 | 3300028888 | Rumen | MVTISNSQRDQAVRYLQALAQLMESDNLTKVVNLCRLSRRLAKQLEKREKK |
Ga0247609_111637582 | 3300028888 | Rumen | QRDQAVRYLQALADLESDNQDLKVVNLCRLSRRLAKQLEKREKR |
Ga0247609_112080272 | 3300028888 | Rumen | LPGGFRRLMVTISNSQRDEAVRYLHTFTALMGGDDRTKVKNLCRLARRLAK |
Ga0326513_100108024 | 3300031760 | Rumen | MVEISNAQRDEAVRYLQALSSLMDGDDRTRVINLCRLARRLAKQLEKREKK |
Ga0326513_100210083 | 3300031760 | Rumen | MRDEAVRYLQALADQVSDNRNTRVVNLCRLARRLAKQLNKREKQ |
Ga0326513_101442573 | 3300031760 | Rumen | QTTSKTLLFELMIEISNSQRDQAVRYLQAFTELMGSDNRTKVVNLCRLSRRLAKQLERREKK |
Ga0326513_102441151 | 3300031760 | Rumen | MVEISNRMRDEAVKYLQALADISSSDDRTQVMNLCRLARRLAKQLS |
Ga0326513_102619824 | 3300031760 | Rumen | MVLISNSQRDEAVRYLQALADLESDNRNTKVVNLCRLARRLAKQLEKREKK |
Ga0326513_102632272 | 3300031760 | Rumen | MVEISNKQRDEAVRYLQHLCSLVQGDDLRVVNLRRLAMRLADKLAKKEKR |
Ga0326513_104940062 | 3300031760 | Rumen | MVEISNAQRAEAVRYLQALSSLMDGDDRTRVINLCRLARRLAKQLERRETK |
Ga0326513_106442521 | 3300031760 | Rumen | TILSMVVISNAQRDQAVRYLQALADLESDNQSTKVVNLCRLSRRLARQLEKREKQ |
Ga0326513_106524921 | 3300031760 | Rumen | MILISNSQRDEAVRYLQRFADLTESVTENDGNLKVVNLCRLSRRLAKQLKKKQSL |
Ga0326513_106570441 | 3300031760 | Rumen | QTASKTLLFELMIEISNSQRDQAVRYLQAFTELMGNDNRLKVVNLCRLSRRLAKQLEKREKK |
Ga0326513_108746732 | 3300031760 | Rumen | MIEISNSQRDQAVRYLQALAHLMESDNRTKVVNLCRLSRRLAKQLERREKK |
Ga0326513_110434782 | 3300031760 | Rumen | MVEISNSQRDEAVRYLQAFAQLNASDDRTRVVNLCRLARRLARQLAKRKKTT |
Ga0326513_116181412 | 3300031760 | Rumen | MVTISNSQRDEAVRYLQALADTLAGDDRTQVMNLCRLARRLAKQLQRREKK |
Ga0326513_118325032 | 3300031760 | Rumen | MVVISNSQRDQAVRYLQALADLESDNREIKVVNLVRLSRKLAKQLAKREKK |
Ga0326514_105682222 | 3300031853 | Rumen | MVTISNSQRDEAVRYLQALADLESDNRDLKVVNLVRLARRLAKQLEKRVKK |
Ga0326514_108229002 | 3300031853 | Rumen | MIEISNSQRDQAVRYLQAFTELMGNDNRTKVVNLCRLSRRLAKQLEKREKK |
Ga0326514_109160722 | 3300031853 | Rumen | MVVISNSQRDEAVRYLQRLADLTEGDGSIKAVNLRRLARRLARKLAEKQSQ |
Ga0326514_111263822 | 3300031853 | Rumen | MVLISNSMRDEAVRYLQALADQVSDNRNTRVVNLCRLARRLAKQLNKREKQ |
Ga0326514_112049942 | 3300031853 | Rumen | MVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLDKREKK |
Ga0326514_115148441 | 3300031853 | Rumen | MVTISNSQRDEAVRYLQAFAQLNASDDRTRVVNLCRLARRLAR |
Ga0326511_1000044634 | 3300031867 | Rumen | MILISNSQRDEAVRYLQALADLESDNRDLKVVNLCRLARRLAKQLKKKQSL |
Ga0326511_100057668 | 3300031867 | Rumen | MVVISNRQRDEAVRYLQALTDLESDNRNTRVVNLCRLARRLARQLEQRDKK |
Ga0326511_101263775 | 3300031867 | Rumen | LISNSQRDEAVRYLQALADLESDNRNTRVVNLCRLARRLAKQLEKREKK |
Ga0326511_101529494 | 3300031867 | Rumen | MVVISNSQRDEAVRYLQRLADMTEGDGSIKAVNLRRLARRLARKLAEKQSQ |
Ga0326511_102820333 | 3300031867 | Rumen | MRDEAVRYLQALADQVSDNRNTRVVNLCRLARRLAKQLEKREKK |
Ga0326511_102841591 | 3300031867 | Rumen | MVEISNSQRDEAVRYLQALADLESDNRDLKVVNLVRLARRLAKQL |
Ga0326511_103027154 | 3300031867 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLEKREKK |
Ga0326511_103205043 | 3300031867 | Rumen | MVEISNSQRDQAVRYLQAFTELMGSDNRTKVVNLCRLSRRLAKQLERREKK |
Ga0326511_106491862 | 3300031867 | Rumen | MIEISNSQRDQAVRYLQAFTELMGSDNRTKVVNLCRLSRRLAKQLEKREKK |
Ga0326511_116536782 | 3300031867 | Rumen | MIEISNSQRDQAVRYLQAFTELMGNDNRTKVVNLCRLSRRLAKQLERREKK |
Ga0326511_118522122 | 3300031867 | Rumen | MVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQ |
Ga0326511_118623832 | 3300031867 | Rumen | MVEISNSQRDQAVRYLQALAKLMESDNRTKVVNLCRLSRRLAKQLEKREKK |
Ga0326511_118778942 | 3300031867 | Rumen | MVVISNAQRDQAVRYLQALADLESDNQSTRVVNLCRLSRRLARQLE |
Ga0310694_113528961 | 3300031992 | Rumen | ISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLEKREKK |
Ga0310694_114040822 | 3300031992 | Rumen | RTAILMVEISNSQRDEAVRYLQALADLESDNRSLKVVNLVRLARRLAKQLEKRVKK |
Ga0310691_100245733 | 3300031994 | Rumen | MVTISNSQRDQAVRYLQALADQVSGNRDLRVVNLCRLARRLAKQLEKREKK |
Ga0310697_101497863 | 3300032030 | Rumen | MIEISNSQRDQAVRYLQAFTELMGNDNRLKVVNLCRLSRRLAKQLEKREKK |
Ga0310697_101767951 | 3300032030 | Rumen | MVTISNSQRDEAVRYLQALAQLMESDNRTKVVNLCRLSRRLAKQLEKREKK |
Ga0310697_102757932 | 3300032030 | Rumen | MVTISNSQRDEAVRYLHTFTALMGGDDRTKVKNLCRLARRLAK |
Ga0326512_1000260423 | 3300032038 | Rumen | MVTISNEQRDQAVRYLQALADLESGNQSTRVANLVRLARKLAKQLEQRQKK |
Ga0326512_100027262 | 3300032038 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLAKQLDKREKK |
Ga0326512_100062047 | 3300032038 | Rumen | MVEISNSQRDQAVRYLQVFADMMDNNRDIKVVNICRLARRLAKQLEKREKK |
Ga0326512_100200627 | 3300032038 | Rumen | MVEISNSQRDEAVRYLQALADTLAGDDRTQVMNLCRLARRLAKQLEKREKK |
Ga0326512_100491594 | 3300032038 | Rumen | MITISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLARRLAKQLERREKK |
Ga0326512_100631589 | 3300032038 | Rumen | MIEISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLDKREKK |
Ga0326512_100693065 | 3300032038 | Rumen | MVTISNSQRDEAVRYLQALANLESDNHDIKVVNLCRLSRRLAKQLEKRQKK |
Ga0326512_100812992 | 3300032038 | Rumen | MVTISNSQRDQAVRYLQAFTELESDNRDIKVVNLCRLARRLAKQLDKREKK |
Ga0326512_100834874 | 3300032038 | Rumen | MILISNNQRDEAVRYLQALADLESDNRDLKVVNLCRLARRLAKQLKKKQSL |
Ga0326512_101277043 | 3300032038 | Rumen | MIEISNSQRDQAVRYLQALSALMEGDDRTKVVNLCRLSRRLAKQLEKREKK |
Ga0326512_102038531 | 3300032038 | Rumen | MVLISNSQRDEAVRYLQALADLESDNRNTKVVNLCRLARRLAKQ |
Ga0326512_102672383 | 3300032038 | Rumen | ISNSQRDQAVRYLQALAQLMESDNRTKVVNLCRLSRRLAKQLEKREKK |
Ga0326512_102716441 | 3300032038 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDIKVVNLCRLARRLA |
Ga0326512_103041712 | 3300032038 | Rumen | MVEISNAQRAEAVRYLQALSSLMDGDDRTRVMNLCRLARRLAKQLEKREVK |
Ga0326512_103260414 | 3300032038 | Rumen | MVTISNSQRDQAVRYLQALADLESDNRDIKVVNLCRLARRLAKQLEKRVKK |
Ga0326512_103371182 | 3300032038 | Rumen | MVTISNSQRDQAVRYLQALAKLMESDNRTKVVNLCRLSRRLAKQLEKRDKK |
Ga0326512_103481491 | 3300032038 | Rumen | MVTISNSQRDQAVRYLQAFTELENDNRDLRVVNLCRLARRLAYQ |
Ga0326512_103624162 | 3300032038 | Rumen | MIEISNSQRDEAVRYLQRLADMTEGDGSLKAVNLRRLARRLAKQLEKREKK |
Ga0326512_107371873 | 3300032038 | Rumen | MIEISNSQRDEAVRYLQAFTELMGNDNRTKVVNLCRLSRRLAKQLEKRQKK |
Ga0326512_108887122 | 3300032038 | Rumen | TRTLEMVVISNRQRDEAVRYLQAFTELENDNRDLRVVNLCRLARRLAKQLEQRDKK |
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