Metagenome / Metatranscriptome Family F071848

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	64 residues
Representative Sequence	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQAPKD
Number of Associated Samples	68
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.43 %
% of genes near scaffold ends (potentially truncated)	65.29 %
% of genes from short scaffolds (< 2000 bps)	79.34 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.893 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.884 % of family members)
Environment Ontology (ENVO)	Unclassified (66.942 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 53.73% Coil/Unstructured: 46.27%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00076	RRM_1	7.44
PF09723	Zn-ribbon_8	3.31
PF00313	CSD	1.65
PF08450	SGL	1.65
PF06723	MreB_Mbl	1.65
PF13683	rve_3	1.65
PF13502	AsmA_2	0.83
PF00118	Cpn60_TCP1	0.83
PF13155	Toprim_2	0.83
PF00884	Sulfatase	0.83
PF01329	Pterin_4a	0.83
PF08281	Sigma70_r4_2	0.83
PF08031	BBE	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	1.65
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.65
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.65
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.83
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.89 %
Unclassified	root	N/A	47.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.89 %
Unclassified	root	N/A	47.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.89 %
Unclassified	root	N/A	47.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.45 %
Candidatus Moduliflexus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Moduliflexus	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.45 %
Candidatus Moduliflexus flocculans	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Moduliflexus → Candidatus Moduliflexus flocculans	0.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Candidatus Moduliflexus flocculans	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Moduliflexus → Candidatus Moduliflexus flocculans	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.45 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.83 %
Candidatus Moduliflexus flocculans	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Moduliflexus → Candidatus Moduliflexus flocculans	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.45 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.83 %
Candidatus Moduliflexus flocculans	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Moduliflexus → Candidatus Moduliflexus flocculans	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10101247	Not Available	710	Open in IMG/M
3300004267\|Ga0066396_10056598	Not Available	643	Open in IMG/M
3300004633\|Ga0066395_10235119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300004633\|Ga0066395_10376319	Not Available	795	Open in IMG/M
3300005332\|Ga0066388_100494086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Moduliflexus → Candidatus Moduliflexus flocculans	1860	Open in IMG/M
3300005332\|Ga0066388_101131412	Not Available	1329	Open in IMG/M
3300005332\|Ga0066388_101782930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300005363\|Ga0008090_10045905	Not Available	890	Open in IMG/M
3300005363\|Ga0008090_15302454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005764\|Ga0066903_101821195	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300005764\|Ga0066903_104311232	Not Available	760	Open in IMG/M
3300010048\|Ga0126373_10167836	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300010048\|Ga0126373_10227932	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300010048\|Ga0126373_10367304	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300010048\|Ga0126373_10429507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1352	Open in IMG/M
3300010048\|Ga0126373_10969009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300010048\|Ga0126373_11555004	Not Available	726	Open in IMG/M
3300010048\|Ga0126373_12545548	Not Available	570	Open in IMG/M
3300010048\|Ga0126373_12625752	Not Available	562	Open in IMG/M
3300010360\|Ga0126372_12256339	Not Available	594	Open in IMG/M
3300010376\|Ga0126381_100794728	Not Available	1358	Open in IMG/M
3300010376\|Ga0126381_101027917	Not Available	1189	Open in IMG/M
3300010376\|Ga0126381_101812300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300010376\|Ga0126381_104261472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300010376\|Ga0126381_104411837	Not Available	544	Open in IMG/M
3300010398\|Ga0126383_10185922	Not Available	1980	Open in IMG/M
3300010398\|Ga0126383_11922150	Not Available	680	Open in IMG/M
3300010398\|Ga0126383_12243210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300010398\|Ga0126383_12992969	Not Available	552	Open in IMG/M
3300012971\|Ga0126369_10723470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300012971\|Ga0126369_11801562	Not Available	701	Open in IMG/M
3300016270\|Ga0182036_10055296	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300016270\|Ga0182036_10536527	Not Available	931	Open in IMG/M
3300016270\|Ga0182036_10547244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300016270\|Ga0182036_10639812	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300016270\|Ga0182036_11393533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300016294\|Ga0182041_10040679	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300016319\|Ga0182033_10003732	All Organisms → cellular organisms → Bacteria → Acidobacteria	7974	Open in IMG/M
3300016319\|Ga0182033_11633741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300016341\|Ga0182035_10055828	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300016341\|Ga0182035_10287069	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300016357\|Ga0182032_10888611	Not Available	757	Open in IMG/M
3300016387\|Ga0182040_10060093	All Organisms → cellular organisms → Bacteria → Acidobacteria	2413	Open in IMG/M
3300016387\|Ga0182040_10738443	Not Available	807	Open in IMG/M
3300016404\|Ga0182037_10633690	Not Available	910	Open in IMG/M
3300016404\|Ga0182037_10652053	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300016422\|Ga0182039_10054845	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300016422\|Ga0182039_10194503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1612	Open in IMG/M
3300016422\|Ga0182039_10694159	Not Available	897	Open in IMG/M
3300016422\|Ga0182039_11430040	Not Available	629	Open in IMG/M
3300021560\|Ga0126371_10046585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4134	Open in IMG/M
3300021560\|Ga0126371_10459028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1420	Open in IMG/M
3300021560\|Ga0126371_11564808	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300026824\|Ga0207723_100984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2560	Open in IMG/M
3300026895\|Ga0207758_1020318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300026909\|Ga0207858_1000781	All Organisms → cellular organisms → Bacteria → Acidobacteria	3471	Open in IMG/M
3300027703\|Ga0207862_1088868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300031543\|Ga0318516_10288940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300031545\|Ga0318541_10006139	All Organisms → cellular organisms → Bacteria → Acidobacteria	5111	Open in IMG/M
3300031545\|Ga0318541_10450146	Not Available	720	Open in IMG/M
3300031561\|Ga0318528_10312339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300031573\|Ga0310915_10089651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2060	Open in IMG/M
3300031573\|Ga0310915_10453321	Not Available	911	Open in IMG/M
3300031668\|Ga0318542_10203280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300031681\|Ga0318572_10133053	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300031713\|Ga0318496_10805154	Not Available	518	Open in IMG/M
3300031719\|Ga0306917_10017338	All Organisms → cellular organisms → Bacteria → Proteobacteria	4347	Open in IMG/M
3300031719\|Ga0306917_10616418	Not Available	853	Open in IMG/M
3300031747\|Ga0318502_10893914	Not Available	540	Open in IMG/M
3300031748\|Ga0318492_10394067	Not Available	728	Open in IMG/M
3300031751\|Ga0318494_10918347	Not Available	514	Open in IMG/M
3300031765\|Ga0318554_10378599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300031777\|Ga0318543_10161098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300031792\|Ga0318529_10358859	Not Available	679	Open in IMG/M
3300031793\|Ga0318548_10314341	Not Available	770	Open in IMG/M
3300031819\|Ga0318568_10851367	Not Available	565	Open in IMG/M
3300031833\|Ga0310917_10069903	Not Available	2200	Open in IMG/M
3300031833\|Ga0310917_10233239	Not Available	1236	Open in IMG/M
3300031835\|Ga0318517_10397228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031859\|Ga0318527_10036073	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300031879\|Ga0306919_10333417	Not Available	1156	Open in IMG/M
3300031890\|Ga0306925_11819822	Not Available	582	Open in IMG/M
3300031890\|Ga0306925_12029807	Not Available	541	Open in IMG/M
3300031893\|Ga0318536_10322675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300031897\|Ga0318520_10645897	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300031910\|Ga0306923_10177221	Not Available	2434	Open in IMG/M
3300031910\|Ga0306923_10987733	Not Available	915	Open in IMG/M
3300031910\|Ga0306923_12065982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300031910\|Ga0306923_12267442	Not Available	542	Open in IMG/M
3300031912\|Ga0306921_10060836	All Organisms → cellular organisms → Bacteria → Proteobacteria	4309	Open in IMG/M
3300031912\|Ga0306921_10206384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2302	Open in IMG/M
3300031912\|Ga0306921_11450048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300031912\|Ga0306921_11787853	Not Available	661	Open in IMG/M
3300031941\|Ga0310912_10220019	Not Available	1455	Open in IMG/M
3300031941\|Ga0310912_10557228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300031945\|Ga0310913_10926010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031947\|Ga0310909_10126284	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300031947\|Ga0310909_10341024	Not Available	1257	Open in IMG/M
3300031947\|Ga0310909_11681898	Not Available	501	Open in IMG/M
3300031954\|Ga0306926_12011301	Not Available	649	Open in IMG/M
3300031981\|Ga0318531_10346390	Not Available	672	Open in IMG/M
3300032001\|Ga0306922_10989583	Not Available	868	Open in IMG/M
3300032025\|Ga0318507_10322398	Not Available	672	Open in IMG/M
3300032035\|Ga0310911_10308338	Not Available	911	Open in IMG/M
3300032042\|Ga0318545_10112709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300032043\|Ga0318556_10053904	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300032051\|Ga0318532_10008083	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300032059\|Ga0318533_10190518	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300032059\|Ga0318533_10950090	Not Available	631	Open in IMG/M
3300032060\|Ga0318505_10352887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300032063\|Ga0318504_10404132	Not Available	651	Open in IMG/M
3300032076\|Ga0306924_10301080	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300032091\|Ga0318577_10142904	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300032261\|Ga0306920_100150061	All Organisms → cellular organisms → Bacteria → Acidobacteria	3472	Open in IMG/M
3300032261\|Ga0306920_100235880	All Organisms → cellular organisms → Bacteria	2729	Open in IMG/M
3300032261\|Ga0306920_100664066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1538	Open in IMG/M
3300032261\|Ga0306920_104010639	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.26%
Loam	Environmental → Terrestrial → Soil → Loam	10.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.74%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.74%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101012471	3300000597	Forest Soil	VAHVFEFVDMSGCVLHIINDPKNELPIPTSGQEITIGPSEMWVESVMTSSTNQNIYYVRVRTHATKNGLLRYGRGE*
Ga0066396_100565981	3300004267	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTRTPKD*
Ga0066395_102351192	3300004633	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRKMYYVRVQTKTPKD*
Ga0066395_103763191	3300004633	Tropical Forest Soil	VARIFKFVDMSGCELHTINDPVDQLPIPVHGQEITLGSDRMWVESVMASSTSPQTYYVRVQADTKD*
Ga0066388_1004940861	3300005332	Tropical Forest Soil	VAHIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMRVESVTVSSTNRQMYYVRVQTQAPKD*
Ga0066388_1011314122	3300005332	Tropical Forest Soil	VARVFKFVDMSGCVLHTINDPQDELPIPTYGQEISIGPSRMWVESVMLSSTSPQTYYVRVRNQAEKDLGC*
Ga0066388_1017829302	3300005332	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD*
Ga0008090_100459052	3300005363	Tropical Rainforest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD*
Ga0008090_153024542	3300005363	Tropical Rainforest Soil	VPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD*
Ga0066903_1018211952	3300005764	Tropical Forest Soil	TIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD*
Ga0066903_1043112322	3300005764	Tropical Forest Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRKMYYVRVQTQTPKD*
Ga0126373_101678362	3300010048	Tropical Forest Soil	VARIFEFVDMSGCVLHTINDPEDPLPIPAFGQEVTIGSGGMWVESVRLSSTSPQIYHLRVRTQAEQE*
Ga0126373_102279321	3300010048	Tropical Forest Soil	VPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD*
Ga0126373_103673043	3300010048	Tropical Forest Soil	FKFLDMAGSVLHTIDDPQDQLPIPVYRQEVTIGSDRMRVESVMVRSTGPQTYYVCVQTKAPKD*
Ga0126373_104295071	3300010048	Tropical Forest Soil	VARIFKFLDMSGFVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSANRQMYYVRVQTQAPKD*
Ga0126373_109690093	3300010048	Tropical Forest Soil	VLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTYYVCVETKAPKD*
Ga0126373_115550042	3300010048	Tropical Forest Soil	DMAGSVLHTIDDPEDQLPIPVYRQEITIGPDRMRVESVMVRSTGPQTYYVCVQTKAPKD*
Ga0126373_125455481	3300010048	Tropical Forest Soil	LTDSGYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMQVESVMVRSTGPQTCYVCVQTKAPKD*
Ga0126373_126257521	3300010048	Tropical Forest Soil	LHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQICYVCVQTKAPKD*
Ga0126372_122563391	3300010360	Tropical Forest Soil	TLRLRETEVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERKWVESVMVSSTNRQMYYVSVQTQTPKD*
Ga0126378_105326941	3300010361	Tropical Forest Soil	DPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD*
Ga0126381_1007947283	3300010376	Tropical Forest Soil	MAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTYYVCVQTKAPKD*
Ga0126381_1010279172	3300010376	Tropical Forest Soil	VARIFKFVDMSGCELHTINDPEDQLPIPVHGQEITLGSDKMWVESVVASSTSPQTYYVRVRTEAKD*
Ga0126381_1018123002	3300010376	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRKMYYVRVQTQTPKD*
Ga0126381_1042614721	3300010376	Tropical Forest Soil	VARIFKFLDMSGFVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSANRQMYYVRV
Ga0126381_1044118371	3300010376	Tropical Forest Soil	VPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDSMRVESVMVLSTGPQTCYVCVQTKAP
Ga0126383_101859223	3300010398	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVSVQTQTPKD*
Ga0126383_119221502	3300010398	Tropical Forest Soil	VARIFKFLDMFGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRKMYYVRVQTQTPKD*
Ga0126383_122432102	3300010398	Tropical Forest Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYV
Ga0126383_129929692	3300010398	Tropical Forest Soil	VARIFKFLDVSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSANRQMYYVRVQAQAPKD*
Ga0126369_107234701	3300012971	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSANRQMYYVRVQTQAPKD*
Ga0126369_118015622	3300012971	Tropical Forest Soil	GYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPIYRQEITIGSDRMRVESVMVHSTGPQTYSVCVQTKAPKD*
Ga0182036_100552961	3300016270	Soil	FLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPK
Ga0182036_105365271	3300016270	Soil	TEVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0182036_105472441	3300016270	Soil	ARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMCVESVMVSSTNRQMYYVRVQTQAPKD
Ga0182036_106398123	3300016270	Soil	FLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPK
Ga0182036_113935332	3300016270	Soil	VARIIKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGLERMWVESVMVSSTNRQ
Ga0182041_100406791	3300016294	Soil	TEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0182033_100037323	3300016319	Soil	VAHIFKFLDMSGCVLHTIDDPEDQLPIPVYSQEITIGSERMRVESVTVSSTNRQMYYVRVQTQAPKD
Ga0182033_116337412	3300016319	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMY
Ga0182035_100558281	3300016341	Soil	KTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0182035_102870692	3300016341	Soil	TDSGYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMQVESVMVRSTGPQTCYVCVQTKAPKD
Ga0182032_108886111	3300016357	Soil	FLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPK
Ga0182040_100600931	3300016387	Soil	SVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0182040_107384432	3300016387	Soil	DMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD
Ga0182037_106336902	3300016404	Soil	IFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0182037_106520532	3300016404	Soil	TQVPSNSRIFNFVDVSGCELHTINDPKDQLPIPVHSQEITLGSDRIRVESVMASSTSPQTYYVRVRTAAKP
Ga0182039_100548451	3300016422	Soil	VPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0182039_101945033	3300016422	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYY
Ga0182039_106941592	3300016422	Soil	LDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0182039_114300401	3300016422	Soil	RSTLTDSGYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPIYRQEITIGSDRMRVESVMVHSTGPQTYSVCVQTKAPKD
Ga0126371_100465855	3300021560	Tropical Forest Soil	VARIFKFVDMSGCELHTINDPVDQLPIPVHGQEITLGSDRMWVESVMASSTSPQTYYVRVQADTKD
Ga0126371_104590282	3300021560	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRKMYYVRVQTQTPKD
Ga0126371_115648082	3300021560	Tropical Forest Soil	LTDSGYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMQVESVMVRSTGPQTCYVCVQTKAPKD
Ga0207723_1009843	3300026824	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPKD
Ga0207758_10203182	3300026895	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYV
Ga0207858_10007817	3300026909	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTRTPKD
Ga0207860_10069495	3300026921	Tropical Forest Soil	RKTSFRFPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTRTPKD
Ga0207862_10888681	3300027703	Tropical Forest Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRV
Ga0318516_102889401	3300031543	Soil	KVARIIKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGLERMWVESVMVSSTNRQMYYVRVQTQTLKD
Ga0318541_100061396	3300031545	Soil	VAHIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMRVESVTVSSTNRQMYYVRVQTQAPKD
Ga0318541_104501461	3300031545	Soil	KTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVTVRSTGPQTCYVCVQTKAPKD
Ga0318528_103123392	3300031561	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQA
Ga0310915_100896511	3300031573	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0310915_104533211	3300031573	Soil	KFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0318542_102032802	3300031668	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0318572_101330531	3300031681	Soil	VAHIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMRVESVTVSSTNRQMY
Ga0318496_108051541	3300031713	Soil	DMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0306917_100173387	3300031719	Soil	GYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0306917_106164181	3300031719	Soil	FKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVTVRSTGPQTCYVCVQTKAPKD
Ga0318502_108939141	3300031747	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSLTNRQMY
Ga0318492_103940671	3300031748	Soil	VARIFRFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTLKD
Ga0318494_109183471	3300031751	Soil	RIFRFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQAPKD
Ga0318554_103785991	3300031765	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQAPKD
Ga0318543_101610981	3300031777	Soil	VLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0318529_103588592	3300031792	Soil	LRETEVKVARIFRFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0318548_103143412	3300031793	Soil	ETEVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0318568_108513672	3300031819	Soil	VKVARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPKD
Ga0310917_100699034	3300031833	Soil	LRETEVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMCVESVMVSSTNRQMYYVRVQTQAPKD
Ga0310917_102332391	3300031833	Soil	CVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPKD
Ga0318517_103972281	3300031835	Soil	VAHIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMRVESVTVSSTNRQMYYVRV
Ga0318527_100360734	3300031859	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMCVESVMVSSTNRQ
Ga0306919_103334172	3300031879	Soil	EVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPKD
Ga0306925_118198221	3300031890	Soil	KTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMQVESVMVRSTGPQTCYVCVQTKAPKD
Ga0306925_120298071	3300031890	Soil	VARIFKFLDMFGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYLRVQTQT
Ga0318536_103226752	3300031893	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTLKD
Ga0318520_106458971	3300031897	Soil	GSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0306923_101772215	3300031910	Soil	LHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPKD
Ga0306923_109877331	3300031910	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSDTMWVESVMVSSTNRQMYYVRVQTQ
Ga0306923_120659821	3300031910	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGLERMWVESVMVSSTNRQMYYVRVQTQTL
Ga0306923_122674421	3300031910	Soil	FKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQAPKD
Ga0306921_100608361	3300031912	Soil	FKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0306921_102063841	3300031912	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0306921_114500482	3300031912	Soil	VARIIKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGLERMWVESVMVSSTNRQMYYVRVQTQTLKD
Ga0306921_117878531	3300031912	Soil	FKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD
Ga0310912_102200191	3300031941	Soil	LRETEVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVRTETPKD
Ga0310912_105572281	3300031941	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSLTNRQMYYVCVQTETP
Ga0310913_109260101	3300031945	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPK
Ga0310909_101262841	3300031947	Soil	VFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVTVRSTGPQTCYVCVQTKAPKD
Ga0310909_103410242	3300031947	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSLTNRQMYYVCAQTETPKD
Ga0310909_116818982	3300031947	Soil	LTDSGYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTC
Ga0306926_110685851	3300031954	Soil	VARIFEFLDMFGCVLHTIDDPEDQLPIPVYRQEITIGSDRMWVESVMVSSTN
Ga0306926_120113011	3300031954	Soil	LHTIDDPEDQLPIPVYRQEITIGSDRMQVESVMVRSTGPQTCYVCVQTKAPKD
Ga0318531_103463901	3300031981	Soil	LDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVTVRSTGPQTCYVCVQTKAPKD
Ga0306922_109895832	3300032001	Soil	VARIFRFLDMSGCVLHTIDDPEDQLPIPVYRREITIGSERMCVESVMVSSTNRQMYYVRVQTQAPKD
Ga0318507_103223982	3300032025	Soil	FLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPK
Ga0310911_103083381	3300032035	Soil	FKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTPTPKD
Ga0318545_101127091	3300032042	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQAPKD
Ga0318556_100539044	3300032043	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD
Ga0318532_100080835	3300032051	Soil	LRETEVKVARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0318533_101905183	3300032059	Soil	RSTLTDSGYEKTEVKVPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD
Ga0318533_109500901	3300032059	Soil	VPRVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGPDRMRVESVTVRSTGPQTFYVCVQTKAPKD
Ga0318505_103528871	3300032060	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQT
Ga0318504_104041322	3300032063	Soil	TEVKVARIFEFLDMSGCVLHTIDDPEDQLPIPVCRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTPKD
Ga0306924_103010804	3300032076	Soil	AGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVMVRSTGPQTCYVCVQTKAPKD
Ga0318577_101429043	3300032091	Soil	VAHIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMRVESVTVSSTNRQMYY
Ga0306920_1001500617	3300032261	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSLTNRQMYYVCVQTETPKD
Ga0306920_1002358801	3300032261	Soil	RVFKFLDMAGSVLHTIDDPEDQLPIPVYRQEITIGSDRMRVESVRVRSTGPQTYYVCVQTKAPKD
Ga0306920_1006640663	3300032261	Soil	VARIFKFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMCVESVMVSSTNRQMYYVRVQTQAPKD
Ga0306920_1019257782	3300032261	Soil	PEDQLPIPVYRQEITIGPDRMRVESVTVRSTGPQTFYVCVQTKAPKD
Ga0306920_1040106391	3300032261	Soil	VARIFEFLDMSGCVLHTIDDPEDQLPIPVYRQEITIGSERMWVESVMVSSTNRQMYYVRVQTQTLKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences