Metagenome / Metatranscriptome Family F072057

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072057
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	47 residues
Representative Sequence	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Number of Associated Samples	60
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.34 %
% of genes near scaffold ends (potentially truncated)	31.40 %
% of genes from short scaffolds (< 2000 bps)	80.99 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.678 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat (46.281 % of family members)
Environment Ontology (ENVO)	Unclassified (92.562 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.67% β-sheet: 0.00% Coil/Unstructured: 61.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02486	Rep_trans	20.00
PF01507	PAPS_reduct	5.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2946	DNA relaxase NicK	Replication, recombination and repair [L]	20.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.68 %
Unclassified	root	N/A	34.71 %
Viruses	superkingdom	All Organisms → Viruses	6.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.68 %
Unclassified	root	N/A	34.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.07 %
Unclassified	root	N/A	34.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	52.07 %
Unclassified	root	N/A	34.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.31 %

Name	Rank	Taxonomy	Distribution
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	52.07 %
Unclassified	root	N/A	34.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.31 %

Name	Rank	Taxonomy	Distribution
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	52.07 %
Unclassified	root	N/A	34.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.31 %

Name	Rank	Taxonomy	Distribution
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	52.07 %
Unclassified	root	N/A	34.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.31 %

Name	Rank	Taxonomy	Distribution
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	52.07 %
Unclassified	root	N/A	34.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.31 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2010170002\|BISONQ_C11480	Not Available	1417	Open in IMG/M
2015219002\|YNP15_C8825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1157	Open in IMG/M
2016842003\|YNP16_C4421	Not Available	863	Open in IMG/M
3300002493\|JGI24185J35167_1029155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1363	Open in IMG/M
3300002493\|JGI24185J35167_1045611	Not Available	926	Open in IMG/M
3300002493\|JGI24185J35167_1046653	Not Available	908	Open in IMG/M
3300002493\|JGI24185J35167_1067931	Not Available	660	Open in IMG/M
3300002493\|JGI24185J35167_1072255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	628	Open in IMG/M
3300002510\|JGI24186J35511_1007488	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2576	Open in IMG/M
3300002510\|JGI24186J35511_1008978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2273	Open in IMG/M
3300002510\|JGI24186J35511_1022360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1126	Open in IMG/M
3300002510\|JGI24186J35511_1027022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	963	Open in IMG/M
3300003688\|Ga0061020_1037994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1258	Open in IMG/M
3300003688\|Ga0061020_1040681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1192	Open in IMG/M
3300005240\|Ga0068641_101321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	803	Open in IMG/M
3300005240\|Ga0068641_101620	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1982	Open in IMG/M
3300005240\|Ga0068641_101910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	789	Open in IMG/M
3300005241\|Ga0068642_101157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	633	Open in IMG/M
3300005242\|Ga0068639_102728	Not Available	851	Open in IMG/M
3300005246\|Ga0068638_196531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1130	Open in IMG/M
3300005247\|Ga0068637_1002412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	792	Open in IMG/M
3300005247\|Ga0068637_1015504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	834	Open in IMG/M
3300005248\|Ga0068636_1007888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	861	Open in IMG/M
3300005248\|Ga0068636_1063042	Not Available	856	Open in IMG/M
3300005249\|Ga0068645_1139836	Not Available	662	Open in IMG/M
3300005251\|Ga0068634_1007464	Not Available	973	Open in IMG/M
3300005390\|Ga0068657_167390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	832	Open in IMG/M
3300005411\|Ga0068647_1104766	Not Available	834	Open in IMG/M
3300005411\|Ga0068647_1117510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	799	Open in IMG/M
3300005414\|Ga0068646_1004503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	803	Open in IMG/M
3300005452\|Ga0068706_1020049	Not Available	1506	Open in IMG/M
3300005452\|Ga0068706_1027873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1175	Open in IMG/M
3300005452\|Ga0068706_1059727	Not Available	684	Open in IMG/M
3300005452\|Ga0068706_1067411	Not Available	634	Open in IMG/M
3300005453\|Ga0068705_10029203	All Organisms → Viruses → Predicted Viral	2025	Open in IMG/M
3300005453\|Ga0068705_10049526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1351	Open in IMG/M
3300005501\|Ga0068650_1015446	Not Available	909	Open in IMG/M
3300005638\|Ga0068669_1293439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	774	Open in IMG/M
3300006068\|Ga0081428_113080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	651	Open in IMG/M
3300006068\|Ga0081428_121380	Not Available	716	Open in IMG/M
3300006849\|Ga0102029_1004417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	991	Open in IMG/M
3300006849\|Ga0102029_1020935	Not Available	895	Open in IMG/M
3300007000\|Ga0102499_1119796	Not Available	549	Open in IMG/M
3300007885\|Ga0111098_10036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	4367	Open in IMG/M
3300007885\|Ga0111098_10796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	996	Open in IMG/M
3300010023\|Ga0130028_102349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	933	Open in IMG/M
3300010184\|Ga0124920_1123423	Not Available	550	Open in IMG/M
3300010189\|Ga0124915_1142954	Not Available	581	Open in IMG/M
3300010190\|Ga0124925_1035987	Not Available	865	Open in IMG/M
3300010190\|Ga0124925_1062903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	816	Open in IMG/M
3300010191\|Ga0124914_1042203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	746	Open in IMG/M
3300010191\|Ga0124914_1077370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	778	Open in IMG/M
3300010194\|Ga0124921_1021168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	889	Open in IMG/M
3300010256\|Ga0124939_1004771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	808	Open in IMG/M
3300010256\|Ga0124939_1152038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	836	Open in IMG/M
3300026237\|Ga0209750_1005800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	3410	Open in IMG/M
3300026237\|Ga0209750_1015515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1730	Open in IMG/M
3300026237\|Ga0209750_1018337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1538	Open in IMG/M
3300026278\|Ga0209018_1093865	Not Available	583	Open in IMG/M
3300026280\|Ga0209017_10041774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1093	Open in IMG/M
3300026280\|Ga0209017_10084600	Not Available	623	Open in IMG/M
3300026509\|Ga0209809_1061858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1087	Open in IMG/M
3300026509\|Ga0209809_1107232	Not Available	698	Open in IMG/M
3300027279\|Ga0209691_1011522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2702	Open in IMG/M
3300027279\|Ga0209691_1028135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1251	Open in IMG/M
3300031245\|Ga0308395_1053940	Not Available	1039	Open in IMG/M
3300031508\|Ga0308394_1036725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1240	Open in IMG/M
3300031509\|Ga0308399_1091149	Not Available	614	Open in IMG/M
3300031513\|Ga0308412_1011889	All Organisms → Viruses → Predicted Viral	4044	Open in IMG/M
3300031513\|Ga0308412_1020496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2763	Open in IMG/M
3300031513\|Ga0308412_1027775	All Organisms → Viruses → Predicted Viral	2230	Open in IMG/M
3300031513\|Ga0308412_1036699	Not Available	1818	Open in IMG/M
3300031513\|Ga0308412_1038232	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1764	Open in IMG/M
3300031513\|Ga0308412_1054265	Not Available	1366	Open in IMG/M
3300031513\|Ga0308412_1062265	Not Available	1233	Open in IMG/M
3300031513\|Ga0308412_1071324	All Organisms → Viruses → Predicted Viral	1114	Open in IMG/M
3300031513\|Ga0308412_1085973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	971	Open in IMG/M
3300031513\|Ga0308412_1103531	Not Available	850	Open in IMG/M
3300031516\|Ga0308398_1061340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	896	Open in IMG/M
3300031517\|Ga0308392_1019035	Not Available	1897	Open in IMG/M
3300031568\|Ga0308393_1067524	Not Available	800	Open in IMG/M
3300031767\|Ga0308401_1007470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2727	Open in IMG/M
3300031783\|Ga0308418_1036794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1280	Open in IMG/M
3300031812\|Ga0308411_10033779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2573	Open in IMG/M
3300031812\|Ga0308411_10052413	All Organisms → Viruses → Predicted Viral	1838	Open in IMG/M
3300031812\|Ga0308411_10056413	All Organisms → Viruses → Predicted Viral	1735	Open in IMG/M
3300031812\|Ga0308411_10114593	Not Available	1007	Open in IMG/M
3300031875\|Ga0308405_1051141	Not Available	1136	Open in IMG/M
3300031875\|Ga0308405_1065442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	953	Open in IMG/M
3300031875\|Ga0308405_1119558	Not Available	624	Open in IMG/M
3300031878\|Ga0308404_1007105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2807	Open in IMG/M
3300031878\|Ga0308404_1011504	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2093	Open in IMG/M
3300031950\|Ga0308417_1014266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	4217	Open in IMG/M
3300031950\|Ga0308417_1035336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2245	Open in IMG/M
3300031950\|Ga0308417_1035353	All Organisms → Viruses → Predicted Viral	2244	Open in IMG/M
3300031950\|Ga0308417_1035353	All Organisms → Viruses → Predicted Viral	2244	Open in IMG/M
3300031950\|Ga0308417_1069087	Not Available	1361	Open in IMG/M
3300031950\|Ga0308417_1079303	Not Available	1228	Open in IMG/M
3300031950\|Ga0308417_1239623	Not Available	550	Open in IMG/M
3300031958\|Ga0308410_1018528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2914	Open in IMG/M
3300031958\|Ga0308410_1060878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1175	Open in IMG/M
3300031958\|Ga0308410_1096412	Not Available	835	Open in IMG/M
3300031958\|Ga0308410_1180089	Not Available	539	Open in IMG/M
3300031980\|Ga0308403_1027040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1292	Open in IMG/M
3300032049\|Ga0308416_1007794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2991	Open in IMG/M
3300032049\|Ga0308416_1010984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2418	Open in IMG/M
3300032056\|Ga0308310_1043376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1308	Open in IMG/M
3300032057\|Ga0308421_1014421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2798	Open in IMG/M
3300032058\|Ga0308419_1040993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1723	Open in IMG/M
3300032058\|Ga0308419_1128116	Not Available	686	Open in IMG/M
3300032356\|Ga0308414_1038235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2149	Open in IMG/M
3300032356\|Ga0308414_1088154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1132	Open in IMG/M
3300032356\|Ga0308414_1095421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1063	Open in IMG/M
3300033886\|Ga0308413_013533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	3087	Open in IMG/M
3300033886\|Ga0308413_034586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1571	Open in IMG/M
3300033886\|Ga0308413_034587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1571	Open in IMG/M
3300033886\|Ga0308413_043211	Not Available	1332	Open in IMG/M
3300033886\|Ga0308413_057039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1086	Open in IMG/M
3300033886\|Ga0308413_068275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	953	Open in IMG/M
3300034646\|Ga0372965_029399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	781	Open in IMG/M
3300034649\|Ga0372972_037712	Not Available	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Thermal Springs	Environmental → Aquatic → Thermal Springs	100.00%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	95.87%
Alkaline	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Alkaline	2.48%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	1.65%

Habitat	Taxonomy	Distribution
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	46.28%
Anoxygenic And Chlorotrophic Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat	38.84%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	8.26%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	2.48%
Hotsprings	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hotsprings	1.65%
Planktonic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Alkaline → Planktonic	1.65%
Terrestrial Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Alkaline → Terrestrial Hot Spring Microbial Mat	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2010170002	4_050719Q	Environmental	Open in IMG/M
2015219002	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP15 Mushroom Spring	Environmental	Open in IMG/M
2016842003	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP16 Fairy Spring Red Layer	Environmental	Open in IMG/M
3300002493	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS undermat 2012	Environmental	Open in IMG/M
3300002510	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300003688	Coassembly of YNP Bryant MS undermat 2012 and YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300005240	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0700_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005241	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0800_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005242	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0300_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005246	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005247	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2000_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005248	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1900_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005249	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1200_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005251	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005390	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_B MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005411	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005414	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300(2)_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005452	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG	Environmental	Open in IMG/M
3300005453	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG	Environmental	Open in IMG/M
3300005501	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005638	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_B MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006068	Hotspring Microbial Communities from Mammoth Norris Corridor Bijah Spring, Yellowstone National Park, Wyoming, USA ? Sample 4, Mini-Metagenomics	Environmental	Open in IMG/M
3300006849	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007000	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007885	Spring water viral communities from Black Pool hot spring in the West Thumb Geyser Basin, Yellowstone National Park, WY, USA	Environmental	Open in IMG/M
3300010023	Terrestrial hot spring microbial mat viral communities from Octopus Spring, Yellowstone National Park, Wyoming (2009) spADES assembly	Environmental	Open in IMG/M
3300010184	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0800_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010189	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2000_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010190	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010191	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1900_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010194	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0900_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010256	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500(2)_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300026237	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012 (SPAdes)	Environmental	Open in IMG/M
3300026278	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012 (SPAdes)	Environmental	Open in IMG/M
3300026280	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS undermat 2012 (SPAdes)	Environmental	Open in IMG/M
3300026509	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG (SPAdes)	Environmental	Open in IMG/M
3300027279	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG (SPAdes)	Environmental	Open in IMG/M
3300031245	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4	Environmental	Open in IMG/M
3300031508	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2	Environmental	Open in IMG/M
3300031509	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-60	Environmental	Open in IMG/M
3300031513	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayer	Environmental	Open in IMG/M
3300031516	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9	Environmental	Open in IMG/M
3300031517	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050624_m2	Environmental	Open in IMG/M
3300031568	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2	Environmental	Open in IMG/M
3300031767	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1	Environmental	Open in IMG/M
3300031783	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cd	Environmental	Open in IMG/M
3300031812	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer	Environmental	Open in IMG/M
3300031875	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13	Environmental	Open in IMG/M
3300031878	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4	Environmental	Open in IMG/M
3300031950	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65	Environmental	Open in IMG/M
3300031958	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCore	Environmental	Open in IMG/M
3300031980	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M3	Environmental	Open in IMG/M
3300032049	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS60	Environmental	Open in IMG/M
3300032056	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS65	Environmental	Open in IMG/M
3300032057	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS60	Environmental	Open in IMG/M
3300032058	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50	Environmental	Open in IMG/M
3300032356	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50	Environmental	Open in IMG/M
3300033886	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090729_t10cd	Environmental	Open in IMG/M
3300034646	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_0000_MSt4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034649	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1400_MSt11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BISONQ_272640	2010170002	Hot Spring	MAAEKGRIERNGSNGNGQADMFCRTVMAAVVAVLALRLCQLIRRWLAE
YNP15172740	2015219002	Hot Spring	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQYVRRWLQG
YNP16_111340	2016842003	Hot Spring	MNERRNGQLGHSGPGSDGQADMFCRSVVAAIAAMLALRLCQYIRKWLQG
JGI24185J35167_10291553	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIXXNGSNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG*
JGI24185J35167_10456113	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	MRAQRNGQLGHSEPGGNGQADMFCRTVIAAVAAMLALRLCQWVRKWLNG*
JGI24185J35167_10466533	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	NGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG*
JGI24185J35167_10679311	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	MSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRLL
JGI24185J35167_10722552	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWL
JGI24186J35511_10074883	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	MKRGNGQIGQGNGNGSDVFCKSVVAAVAAMLALRLCXLLRRWLQG*
JGI24186J35511_10089783	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	MSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQWVRKWLNG*
JGI24186J35511_10223603	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	VNEXRNGQLGSGXPXGDGQADMFCRTFVAAVAAMLALRLCQYVRRWLQW*
JGI24186J35511_10270224	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWL
Ga0061020_10379943	3300003688	Anoxygenic And Chlorotrophic Microbial Mat	VNERRNGQLGSGGPIGDGQADMFCRTFVAAVAAMLALRLCQYVRRWLQX*
Ga0061020_10406811	3300003688	Anoxygenic And Chlorotrophic Microbial Mat	VVDMSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0068641_1013211	3300005240	Anoxygenic And Chlorotrophic Microbial Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRR
Ga0068641_1016203	3300005240	Anoxygenic And Chlorotrophic Microbial Mat	MSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0068641_1019102	3300005240	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLR
Ga0068642_1011572	3300005241	Anoxygenic And Chlorotrophic Microbial Mat	MSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRR
Ga0068639_1027282	3300005242	Anoxygenic And Chlorotrophic Microbial Mat	MSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRR
Ga0068638_1965313	3300005246	Anoxygenic And Chlorotrophic Microbial Mat	MSEHRNGRLGSGGSIGDGQADMFCRTVIAALAAMLALRLCQYIRRLLQG*
Ga0068637_10024121	3300005247	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQ
Ga0068637_10155041	3300005247	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG*
Ga0068636_10078882	3300005248	Anoxygenic And Chlorotrophic Microbial Mat	VVDMSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG*
Ga0068636_10630422	3300005248	Anoxygenic And Chlorotrophic Microbial Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0068645_11398361	3300005249	Anoxygenic And Chlorotrophic Microbial Mat	MSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQ
Ga0068634_10074641	3300005251	Anoxygenic And Chlorotrophic Microbial Mat	VDAMERGNGQIGQGNGNGSDVFCKSVVAAVAAMLALRLCQLLRRLLQG*
Ga0068657_1673902	3300005390	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0068647_11047661	3300005411	Anoxygenic And Chlorotrophic Microbial Mat	MERGNGQIGQGNGNGSDVFCKSVVAAVAAMLALRLCRILRRWLQG*
Ga0068647_11175102	3300005411	Anoxygenic And Chlorotrophic Microbial Mat	MSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLR
Ga0068646_10045031	3300005414	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRR
Ga0068706_10200492	3300005452	Anoxygenic And Chlorotrophic	LTVNREGVDMSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQWVRKWLNG*
Ga0068706_10278731	3300005452	Anoxygenic And Chlorotrophic	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG*
Ga0068706_10597271	3300005452	Anoxygenic And Chlorotrophic	KERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0068706_10674111	3300005452	Anoxygenic And Chlorotrophic	NMGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0068705_100292032	3300005453	Anoxygenic And Chlorotrophic	VNKRRNGQLGHSGPDGDGQQDMFCRTVIAALAAMLALRLCQYVRRWLQW*
Ga0068705_100495263	3300005453	Anoxygenic And Chlorotrophic	MPILTVNREGVDMSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQWVRKWLNG*
Ga0068650_10154463	3300005501	Anoxygenic And Chlorotrophic Microbial Mat	MERGNGQIGQGNGNGSDVFCKSVVAAVAAMLALRLCQLLRRLLQG*
Ga0068669_12934392	3300005638	Anoxygenic And Chlorotrophic Microbial Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLAL
Ga0081428_1130801	3300006068	Hotsprings	MSERRNGQLGHSSTGSEGQADMFCRSVVAALAAMLALRLC
Ga0081428_1213803	3300006068	Hotsprings	LGHSSTGSEGQADMFCRSVVAALAAMLALRLCQYIRKWLQG*
Ga0102029_10044172	3300006849	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG*
Ga0102029_10209352	3300006849	Anoxygenic And Chlorotrophic Microbial Mat	MKRGNGQIGQGNGNGSDVFCKSVVAAVAAMLALRLCQLLRRLLQG*
Ga0102499_11197961	3300007000	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKSGSNGNGQEDMFCRTVIAAVAAMLALRLCQLLRRLLQG*
Ga0111098_100362	3300007885	Planktonic	MGGKGQIGQNGSNGNGQADMFCRTVIAAVAAMLALRLCQYLRRLLQG*
Ga0111098_107961	3300007885	Planktonic	MVGRIGPGSDAKNGQGDTFCRTVIAALAAMLALKLCEYIRKW
Ga0130028_1023493	3300010023	Terrestrial Hot Spring Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRW
Ga0124920_11234231	3300010184	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRR
Ga0124915_11429541	3300010189	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG*
Ga0124925_10359871	3300010190	Anoxygenic And Chlorotrophic Microbial Mat	VVDMSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG*
Ga0124925_10629032	3300010190	Anoxygenic And Chlorotrophic Microbial Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQ
Ga0124914_10422031	3300010191	Anoxygenic And Chlorotrophic Microbial Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALRLCQYVR
Ga0124914_10773701	3300010191	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQYVRRWLQG*
Ga0124921_10211682	3300010194	Anoxygenic And Chlorotrophic Microbial Mat	VNEHRNGQLGSGDPIGDGQADMFCRTFVAAVAAMLALRLCQYVRRWLQW*
Ga0124939_10047711	3300010256	Anoxygenic And Chlorotrophic Microbial Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG*
Ga0124939_11520381	3300010256	Anoxygenic And Chlorotrophic Microbial Mat	MSEHRNGRLGSGGSIGDGQADMFCRTVIAALAAMLALRLCQYIRRLLQG
Ga0209750_10058003	3300026237	Anoxygenic And Chlorotrophic Microbial Mat	MRAQRNGQLGHSEPGGNGQADMFCRTVIAAVAAMLALRLCQWVRKWLNG
Ga0209750_10155153	3300026237	Anoxygenic And Chlorotrophic Microbial Mat	VVDMSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG
Ga0209750_10183373	3300026237	Anoxygenic And Chlorotrophic Microbial Mat	VVDMSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG
Ga0209018_10938652	3300026278	Anoxygenic And Chlorotrophic Microbial Mat	MSNRNGQLGHSGPGKGNGQEDMFCRSVIAAIAAMLALRLCQYVRSWLAGM
Ga0209017_100417741	3300026280	Anoxygenic And Chlorotrophic Microbial Mat	MSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRW
Ga0209017_100846001	3300026280	Anoxygenic And Chlorotrophic Microbial Mat	GGHNMGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQYVRRWLQG
Ga0209809_10618583	3300026509	Anoxygenic And Chlorotrophic	VVDMSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0209809_11072321	3300026509	Anoxygenic And Chlorotrophic	AGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0209691_10115224	3300027279	Anoxygenic And Chlorotrophic	MGDKGQIGKSGSNGNGQEDMFCRTVIAAVAAMLALRLCQLLRRLLQG
Ga0209691_10281353	3300027279	Anoxygenic And Chlorotrophic	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG
Ga0308395_10539402	3300031245	Hot Spring Phototrophic Mat	MSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308394_10367251	3300031508	Hot Spring Phototrophic Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG
Ga0308399_10911492	3300031509	Hot Spring Phototrophic Mat	VVDMSDRNGQQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308412_10118895	3300031513	Hot Spring Phototrophic Mat	LTVNRKGVDMSERRNGQLGHNGSGSDGQGDMFCRSVIAAVAAMLALRLCQYLRKLLQG
Ga0308412_10204963	3300031513	Hot Spring Phototrophic Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQYLRHLLQG
Ga0308412_10277754	3300031513	Hot Spring Phototrophic Mat	MNERRNGQLGHSGPGDDGQADMFCRTVIAAVAAMLALRLCQWVRKWLQG
Ga0308412_10366992	3300031513	Hot Spring Phototrophic Mat	LTVNRKGVDMSERRNGQLGHNGSGSDGQADMFCRSVIAAVAAMLALRLCQYVRKWLNG
Ga0308412_10382322	3300031513	Hot Spring Phototrophic Mat	VVDMSDRDGQQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308412_10542651	3300031513	Hot Spring Phototrophic Mat	VVDMSERNGQQTGRSSSVNGNGQADMFCRTVVAAVAAMLALRLCQLLRRWLQG
Ga0308412_10622653	3300031513	Hot Spring Phototrophic Mat	VVDMSKRNNGQIGQSDSINGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308412_10713242	3300031513	Hot Spring Phototrophic Mat	MSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQYIRKWLNG
Ga0308412_10859731	3300031513	Hot Spring Phototrophic Mat	MAAEKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308412_11035312	3300031513	Hot Spring Phototrophic Mat	MAAEKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308398_10613403	3300031516	Hot Spring Phototrophic Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLL
Ga0308392_10190353	3300031517	Hot Spring Phototrophic Mat	VVDMSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308393_10675242	3300031568	Hot Spring Phototrophic Mat	MGDKGQIGKSGSNGNGQEDMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308401_10074702	3300031767	Hot Spring Phototrophic Mat	VVDMSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQYLRRLLQG
Ga0308418_10367941	3300031783	Hot Spring Phototrophic Mat	VVDMSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG
Ga0308411_100337794	3300031812	Hot Spring Phototrophic Mat	MGDKGQIRQNGSNGNGQADMFCRTVVAAVAAMLALRLCQLVRRWLQG
Ga0308411_100524131	3300031812	Hot Spring Phototrophic Mat	MSEHRNGRLGSGGSIGDGQADMFCRTVIAALAAMLALRLCQWVRKWLHG
Ga0308411_100564132	3300031812	Hot Spring Phototrophic Mat	MSERRNGQLGHNGSGSDGQADMFCRSVIAAVAAMLALRLCQYLRKLLQG
Ga0308411_101145932	3300031812	Hot Spring Phototrophic Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLQG
Ga0308405_10511412	3300031875	Hot Spring Phototrophic Mat	RNGQLGSGGPVGDGQADMFCRTFVAAVAAMLALRLCQYVRRWLQG
Ga0308405_10654423	3300031875	Hot Spring Phototrophic Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQ
Ga0308405_11195582	3300031875	Hot Spring Phototrophic Mat	QIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQYVRRWLQG
Ga0308404_10071053	3300031878	Hot Spring Phototrophic Mat	VVDMSERNGQQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308404_10115044	3300031878	Hot Spring Phototrophic Mat	MSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308417_10142665	3300031950	Hot Spring Phototrophic Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308417_10353363	3300031950	Hot Spring Phototrophic Mat	MSERRNGQLGHSDPGGDGQADMFCRTVIAALAAMLALRLCQYIRKWLNG
Ga0308417_10353531	3300031950	Hot Spring Phototrophic Mat	MSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLC
Ga0308417_10353535	3300031950	Hot Spring Phototrophic Mat	DMSERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQYIRKWLNG
Ga0308417_10690872	3300031950	Hot Spring Phototrophic Mat	MREQRNGQLGHSEPGGNGQADMFCRTVIAALAAMLALRLCQWARKWLHG
Ga0308417_10793033	3300031950	Hot Spring Phototrophic Mat	MRAQRNGQLGHSETGGNGQADMFCRTVIAALAAMLALRLCQWARKWLHG
Ga0308417_12396231	3300031950	Hot Spring Phototrophic Mat	SKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308410_10185284	3300031958	Hot Spring Phototrophic Mat	MSERRNGQLGHNGSGSDGQADMFCRSVIAAVAAMLALRLCQYVRKWLNG
Ga0308410_10608782	3300031958	Hot Spring Phototrophic Mat	MGERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQWVRKWLNG
Ga0308410_10964123	3300031958	Hot Spring Phototrophic Mat	MGDKGQIRQNGSNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308410_11800891	3300031958	Hot Spring Phototrophic Mat	MNERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQWVRKWLHG
Ga0308403_10270402	3300031980	Hot Spring Phototrophic Mat	GQRDSINGNGQADMFCRTVIAAVAAMLALRLCQYLRRLLQG
Ga0308416_10077941	3300032049	Hot Spring Phototrophic Mat	MSEHRNGRLGSGGSISDGQADMFCRTVIAALAAMLALRLCQYIRRLLQG
Ga0308416_10109844	3300032049	Hot Spring Phototrophic Mat	VVDMSKRNNGQIGQRDSIGGNGQADTFCRTVVAALAAMLALRLCQWVRKWLQG
Ga0308310_10433763	3300032056	Hot Spring Phototrophic Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLA
Ga0308421_10144213	3300032057	Hot Spring Phototrophic Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308419_10409931	3300032058	Hot Spring Phototrophic Mat	DMADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG
Ga0308419_11281161	3300032058	Hot Spring Phototrophic Mat	MSERNNGQTGRSSSVNGNGQADMFCRTVIAAVAAMLALKLCRIIRHWLQG
Ga0308414_10382353	3300032356	Hot Spring Phototrophic Mat	MADKGRIGQNGSNGNGQADMFCRTVIAAVAAMLALKLCQFLKRWLQG
Ga0308414_10881541	3300032356	Hot Spring Phototrophic Mat	MGDKGQIGKNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308414_10954212	3300032356	Hot Spring Phototrophic Mat	MNERRNGQLGHSGPGGDGQADMFCRTVIAALAAMLALRLCQWVRKWLQG
Ga0308413_013533_2634_2786	3300033886	Hot Spring Phototrophic Mat	MSDRNGQQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLVRRWLQG
Ga0308413_034586_1349_1501	3300033886	Hot Spring Phototrophic Mat	MSERNGQQTGRSSSVNGNGQADMFCRTVVAAVAAMLALRLCQYLRRLLQG
Ga0308413_034587_71_223	3300033886	Hot Spring Phototrophic Mat	MSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQYLRRLLQG
Ga0308413_043211_1020_1166	3300033886	Hot Spring Phototrophic Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308413_057039_918_1070	3300033886	Hot Spring Phototrophic Mat	MSDRDGQQTGRSSSVNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWLQG
Ga0308413_068275_816_953	3300033886	Hot Spring Phototrophic Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALRLCQLLRRWL
Ga0372965_029399_1_111	3300034646	Hot Spring Phototrophic Mat	MAAGKERIERNGSNGNGQADMFCRTVIAAVAAMLALR
Ga0372972_037712_498_650	3300034649	Hot Spring Phototrophic Mat	MSKRNNGQIGQRDSINGNGQADMFCRTVIAAVAAMLALRLCQLLRRLLQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences