Metagenome / Metatranscriptome Family F072158

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072158
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	111 residues
Representative Sequence	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGATGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Number of Associated Samples	93
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.01 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.140 % of family members)
Environment Ontology (ENVO)	Unclassified (30.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.240 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.43% β-sheet: 19.29% Coil/Unstructured: 54.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00494	SQS_PSY	34.71
PF13488	Gly-zipper_Omp	16.53
PF01977	UbiD	7.44
PF00994	MoCF_biosynth	2.48
PF00717	Peptidase_S24	2.48
PF01925	TauE	1.65
PF00589	Phage_integrase	1.65
PF13441	Gly-zipper_YMGG	1.65
PF01541	GIY-YIG	0.83
PF03190	Thioredox_DsbH	0.83
PF13419	HAD_2	0.83
PF10502	Peptidase_S26	0.83
PF13673	Acetyltransf_10	0.83
PF01740	STAS	0.83
PF02423	OCD_Mu_crystall	0.83
PF02575	YbaB_DNA_bd	0.83
PF13469	Sulfotransfer_3	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	34.71
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	7.44
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.65
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	0.83
COG1331	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains	General function prediction only [R]	0.83
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	78.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	78.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	57.02 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	10.74 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.02 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	9.92 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.02 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	9.92 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.02 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.79 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	4.13 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.02 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.96 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4.13 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.02 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.96 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4.13 %
Verrucomicrobium sp. 3C	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10035065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1344	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10087561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300002914\|JGI25617J43924_10068823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1294	Open in IMG/M
3300002914\|JGI25617J43924_10182956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300005167\|Ga0066672_10019233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3537	Open in IMG/M
3300005167\|Ga0066672_10564280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300005179\|Ga0066684_10623956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300005180\|Ga0066685_10782991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300005181\|Ga0066678_10085720	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300005184\|Ga0066671_10040391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2278	Open in IMG/M
3300005332\|Ga0066388_100014000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C	6534	Open in IMG/M
3300005332\|Ga0066388_100062183	All Organisms → cellular organisms → Bacteria	3969	Open in IMG/M
3300005332\|Ga0066388_100099735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3364	Open in IMG/M
3300005332\|Ga0066388_101070415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300005332\|Ga0066388_107468857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300005364\|Ga0070673_100721982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	916	Open in IMG/M
3300005435\|Ga0070714_100319664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1451	Open in IMG/M
3300005440\|Ga0070705_100105854	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300005446\|Ga0066686_10017158	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300005467\|Ga0070706_100199441	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005471\|Ga0070698_100008773	All Organisms → cellular organisms → Bacteria	10883	Open in IMG/M
3300005529\|Ga0070741_10026114	All Organisms → cellular organisms → Bacteria	8583	Open in IMG/M
3300005536\|Ga0070697_100828033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M
3300005540\|Ga0066697_10203525	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300005552\|Ga0066701_10035492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2633	Open in IMG/M
3300005555\|Ga0066692_10360817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	921	Open in IMG/M
3300005559\|Ga0066700_11134797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005560\|Ga0066670_10215373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1158	Open in IMG/M
3300005586\|Ga0066691_10805679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300005764\|Ga0066903_100019805	All Organisms → cellular organisms → Bacteria	7100	Open in IMG/M
3300005764\|Ga0066903_100069211	All Organisms → cellular organisms → Bacteria	4498	Open in IMG/M
3300005764\|Ga0066903_100411369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2233	Open in IMG/M
3300005764\|Ga0066903_101568147	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300006796\|Ga0066665_10587656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	898	Open in IMG/M
3300006800\|Ga0066660_10013589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	4504	Open in IMG/M
3300006854\|Ga0075425_100364348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1664	Open in IMG/M
3300006893\|Ga0073928_10003329	All Organisms → cellular organisms → Bacteria	25607	Open in IMG/M
3300006893\|Ga0073928_10350844	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300006893\|Ga0073928_10672302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300006903\|Ga0075426_10033158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3691	Open in IMG/M
3300006903\|Ga0075426_10387344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300006914\|Ga0075436_100054301	All Organisms → cellular organisms → Bacteria	2766	Open in IMG/M
3300006914\|Ga0075436_100244537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1277	Open in IMG/M
3300007258\|Ga0099793_10490155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300009143\|Ga0099792_10620999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300010048\|Ga0126373_13071010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300010303\|Ga0134082_10058930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1482	Open in IMG/M
3300010333\|Ga0134080_10341550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300010865\|Ga0126346_1245367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300011271\|Ga0137393_11263403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012096\|Ga0137389_11108717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300012181\|Ga0153922_1078205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300012189\|Ga0137388_10667648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	966	Open in IMG/M
3300012202\|Ga0137363_11101364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300012205\|Ga0137362_10887419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300012206\|Ga0137380_10405170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1210	Open in IMG/M
3300012209\|Ga0137379_10584024	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300012212\|Ga0150985_116533286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012361\|Ga0137360_10634930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300012361\|Ga0137360_11812931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300012362\|Ga0137361_10455690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1175	Open in IMG/M
3300012363\|Ga0137390_10741319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	943	Open in IMG/M
3300012363\|Ga0137390_11377375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300012582\|Ga0137358_10305574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1080	Open in IMG/M
3300012917\|Ga0137395_10576631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300012917\|Ga0137395_10830500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300012923\|Ga0137359_10003029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	13555	Open in IMG/M
3300012923\|Ga0137359_11311084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300012927\|Ga0137416_10921373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300012976\|Ga0134076_10033152	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300016294\|Ga0182041_10196702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1602	Open in IMG/M
3300016357\|Ga0182032_11526685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300016371\|Ga0182034_10016120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4336	Open in IMG/M
3300018431\|Ga0066655_11041204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300018433\|Ga0066667_11786200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300018468\|Ga0066662_11749580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300021171\|Ga0210405_10001486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	26600	Open in IMG/M
3300021171\|Ga0210405_10476780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	979	Open in IMG/M
3300021478\|Ga0210402_11080003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300021560\|Ga0126371_10048124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4072	Open in IMG/M
3300022557\|Ga0212123_10000043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	392406	Open in IMG/M
3300022557\|Ga0212123_10137126	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300022557\|Ga0212123_10643090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300025910\|Ga0207684_10018458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	5972	Open in IMG/M
3300025910\|Ga0207684_10533003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300025922\|Ga0207646_10632761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300025922\|Ga0207646_11281177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300025929\|Ga0207664_10470732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1123	Open in IMG/M
3300025960\|Ga0207651_11415352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300026315\|Ga0209686_1004244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	6454	Open in IMG/M
3300026322\|Ga0209687_1001078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	8914	Open in IMG/M
3300026326\|Ga0209801_1178827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300026330\|Ga0209473_1101462	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300026332\|Ga0209803_1081273	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300026342\|Ga0209057_1168321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300026524\|Ga0209690_1031675	All Organisms → cellular organisms → Bacteria	2531	Open in IMG/M
3300026524\|Ga0209690_1064600	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300026528\|Ga0209378_1013188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4876	Open in IMG/M
3300026528\|Ga0209378_1111893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1188	Open in IMG/M
3300026528\|Ga0209378_1195062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300026532\|Ga0209160_1022527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4174	Open in IMG/M
3300026551\|Ga0209648_10128875	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300026552\|Ga0209577_10480469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	842	Open in IMG/M
3300027651\|Ga0209217_1000020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	34168	Open in IMG/M
3300027748\|Ga0209689_1000503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26997	Open in IMG/M
3300027846\|Ga0209180_10073117	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300031545\|Ga0318541_10080670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1721	Open in IMG/M
3300031573\|Ga0310915_10000607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17350	Open in IMG/M
3300031715\|Ga0307476_10382540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
3300031720\|Ga0307469_11693037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300031754\|Ga0307475_10698425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	809	Open in IMG/M
3300031820\|Ga0307473_10778292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300031823\|Ga0307478_11478627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300031896\|Ga0318551_10570256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300031912\|Ga0306921_11310078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300031942\|Ga0310916_10004355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	8943	Open in IMG/M
3300031962\|Ga0307479_10120062	All Organisms → cellular organisms → Bacteria	2563	Open in IMG/M
3300031962\|Ga0307479_10637844	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300032076\|Ga0306924_12223809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300032180\|Ga0307471_102761299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300032180\|Ga0307471_103109884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.56%
Host-Associated	Host-Associated	7.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.60%
Plants	Host-Associated → Plants	6.61%
Aquatic	Environmental → Aquatic	4.96%
Fungi	Host-Associated → Fungi	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Mycelium	Host-Associated → Fungi → Mycelium	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.25%
Loam	Environmental → Terrestrial → Soil → Loam	17.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100350651	3300000597	Forest Soil	VEGAIRLSYDNRNSLDMKRYSELIAGLVLTCLLVGPLVSAWAQDTRNAKEPKIISKEEAAKKYPPPNGKFYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRRGKAHVGDLILDESVNKVFVRPP*
AF_2010_repII_A1DRAFT_100875612	3300000597	Forest Soil	MKKYSGLIAVLIVSCFALAPLTALRAQDTRSAKDPKIIPREEALKKYPPPAGKDYPQGSDLAVLTGGATGGGTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFARPR*
JGI25617J43924_100688232	3300002914	Grasslands Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKVHVGDLILDESANKVFVRPQ*
JGI25617J43924_101829562	3300002914	Grasslands Soil	MKTYSRLVAALVVGCFALGPLAYSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0066672_100192334	3300005167	Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR*
Ga0066672_105642802	3300005167	Soil	CFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLSGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0066684_106239561	3300005179	Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLTVLSGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0066685_107829912	3300005180	Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIVSKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDE
Ga0066678_100857202	3300005181	Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIVSKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR*
Ga0066671_100403913	3300005184	Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLSGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0066388_1000140004	3300005332	Tropical Forest Soil	MKTYSRLVAALVVGCFALGPLASSWAQDTRNAKDPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0066388_1000621833	3300005332	Tropical Forest Soil	MKTYSGLVVALIVAYLTLAPLAALRAQDTRNARDPKIIPREEALKKYPPPAGKDYPQGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFARPR*
Ga0066388_1000997353	3300005332	Tropical Forest Soil	MKNYSGLLITLIVGCFALAPVTALRAQDTRNARDPKIIPRQEALKKYPPPAGKDYPSGSDLAVLSGGATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFLRPR*
Ga0066388_1010704152	3300005332	Tropical Forest Soil	MKKYLGVIAALVVTCVGISPFVQLYAQDTSSAKDPKIITKEEAAKKYPPPNGKSYPPGSDLAVLTGAATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVKKVFVRPP*
Ga0066388_1074688571	3300005332	Tropical Forest Soil	KKYSGLIAVLIVSCFALAPLTASRAQDTRNAKEPKIISPEEAAKKYPPPNGKSYPPGSDLAVLTGGAGGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPK*
Ga0070673_1007219821	3300005364	Switchgrass Rhizosphere	MKRYSTVVAALILGCFALAPLANSLAQDTRNAKEPKIISPQDAAKKYPPPSGKSYPEGSDLAIISGGASGGSTWGYIKSPYSSNVYDCRRGKAHAGDLILDESVNKLFVRPK*
Ga0070714_1003196641	3300005435	Agricultural Soil	MALTCLLLSPLANSWAQDTRNAREPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGASGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0070705_1001058542	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKTYSRLVAALVVGCFALGPLASSWAQDTRNAKDPKIISKEEAAKKYPPPNGKSYPPGSDLALLTGGASGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0066686_100171585	3300005446	Soil	MKTYSRLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGAGGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFERPR*
Ga0070706_1001994412	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGATGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0070698_1000087732	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKTYSGLVAALVLTCFALGPLANSWAQDTRNAKEPKIISKEEATKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0070741_100261145	3300005529	Surface Soil	MKRYSTVVAALILGCFALAPLANSLAQDTRNAKDPKIISPQDAAKKYPPQAGKSYPEGSDLAIISGGASGGSTWGYIKSPYSSNVYDCRRGKAHAGDLILDESVNKVFVRPK*
Ga0070697_1008280331	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKTYSRLVVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0066697_102035251	3300005540	Soil	IGIVTILYMKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0066701_100354922	3300005552	Soil	MKTYSRLVAALVLACFAFGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESANKVFVRPP*
Ga0066692_103608171	3300005555	Soil	MKTYSRLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKA
Ga0066700_111347972	3300005559	Soil	ALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAMLSGGATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESANKVFVRPP*
Ga0066670_102153731	3300005560	Soil	MKRYSGLVAALIIGCFALAPLAISRAQDTRSAKVPKIIPKEEAMKKYPPPNGKQWPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGRSDAHVGDLILDESVNKVFVRPP*
Ga0066691_108056792	3300005586	Soil	ILYMKTYSRLVAALVLACFAFGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0066903_1000198051	3300005764	Tropical Forest Soil	MKKYLSVISALVVACVGLSPFVQVCAQDTGNAKDPKIISKEEAAKKYPPPAGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0066903_1000692114	3300005764	Tropical Forest Soil	MKKYSALVTALVLGCFTLGPLANSWAQDTRNAKDPKIISPEEAAKKYPPPSGKSYPPGSDLAVLTGGASGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPK*
Ga0066903_1004113693	3300005764	Tropical Forest Soil	MKHYSRLIVALVLGCFALGPLATSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0066903_1015681471	3300005764	Tropical Forest Soil	VISALVVAYVVFSPFVQVCAQDTHNAKDPKIISKEEAAKKYPPPNGKSYPPGGDLAVITGGATGGSSWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPP*
Ga0066665_105876561	3300006796	Soil	KTYSRLVAALVVGCFALGPLANSWAQDTRNAREPKIISKEEAAKKYPPPNGKSYPPGSDLAVLNGGATGGSTWAYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0066660_100135895	3300006800	Soil	MKTYSRLVAALVVDCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR*
Ga0075425_1003643483	3300006854	Populus Rhizosphere	MKKYSGLVAALVIGCFALAPLAISRAQDTRSAKEPKIIPKEEAMKKYPPPQGKDWPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDL
Ga0073928_100033297	3300006893	Iron-Sulfur Acid Spring	MKKYLGLISALVVAAFVFIPLVQVRAQDTRDAKDPKIISKEEATKKYPPPSGKDYPMGSDLALISGGAGGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPR*
Ga0073928_103508441	3300006893	Iron-Sulfur Acid Spring	MKKYSGLVAALILGCFALAPLAQSWAQDTRNAKEPKVISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSNAHTGDLILDESVNKVFVRPP*
Ga0073928_106723022	3300006893	Iron-Sulfur Acid Spring	MKKYSGLVAALIVGCFALAPLANSWAQDTRDAKDPKIITQEEAAKKYPPQNGKPYPPGSDLALISGGATGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVN
Ga0075426_100331584	3300006903	Populus Rhizosphere	MNKYSGLVAALIVGCFALAPLAISRAQDTRNAKEPKIIPREEALKKYPPPPGKDYPAGGDLALLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFARPR*
Ga0075426_103873442	3300006903	Populus Rhizosphere	MKKYSGLVAALVIGCFALAPLAISRAQDTRSAKEPKIIPKEEAMKKYPPPQGKDWPSGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0075436_1000543013	3300006914	Populus Rhizosphere	MNKYSGLVAALIVGCFALAPLAISRAQDTRNAKEPKIIPREEALKKYPPPPGKDYPAGGDLALLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0075436_1002445372	3300006914	Populus Rhizosphere	LVIGCFALAPLAISRAQDTRSAKEPKIIPKEEAMKKYPPPQGKDWPSGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0099793_104901552	3300007258	Vadose Zone Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSGNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0099792_106209992	3300009143	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLNGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0126373_130710101	3300010048	Tropical Forest Soil	KYLSVISALVVACVGLSPFVQVCAQDTGNAKDPKIISKEEAAKKYPPPAGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0134082_100589302	3300010303	Grasslands Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAREPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR*
Ga0134080_103415501	3300010333	Grasslands Soil	MKTYSRLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR*
Ga0126346_12453672	3300010865	Boreal Forest Soil	SCFALGPLTNSWAQDTRNAKTPKVISKDEAAKKYPPPNGKSYPAGGDLAILSGGAGGGSTWGYIKSPYSGNVYDCRKGAAKPGDLILDDSVHKLFVRP*
Ga0137393_112634032	3300011271	Vadose Zone Soil	ATAQAFLNEQKPPSVSTMKAVTTYMKRYSGLVVALIFGCFALGPLTSSWAQDTRNAKEPKIISKEEAAKKYPPPNGKPYPPGTDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0137389_111087171	3300012096	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLAYSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGFIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVR
Ga0153922_10782052	3300012181	Attine Ant Fungus Gardens	MKKYLGLISALVLAAFVFIPLVQVRAQDTRDAKDPKIISKEEAAKKYPPPQGKDYPMGSDLALLSGGAGGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKLFVRPR*
Ga0137388_106676483	3300012189	Vadose Zone Soil	LGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGASGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0137363_111013641	3300012202	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0137362_108874192	3300012205	Vadose Zone Soil	MGCFALGPLANSWAQDTRNAREPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0137380_104051701	3300012206	Vadose Zone Soil	MKTYSGLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLVLDESVNKVFVRPP*
Ga0137379_105840242	3300012209	Vadose Zone Soil	MKTYSGLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSSNVYDCRKGKGKAHVGDLILDESVNKVFVRPP*
Ga0150985_1165332861	3300012212	Avena Fatua Rhizosphere	KGRADRGPIAQTYLNEQKIPSVLAIETEINNMNKYRGLVAALIVGWFALAPLANLQAQDTSNAKQPKIIPKEEALKKYPPQKGKDYPPGSDLTVINGGAGHGGTWGYIKSPYSSNVYDCRKGKAHVGDLILDEAANKVFVRPP*
Ga0137360_106349302	3300012361	Vadose Zone Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKFYPPGSDLTVLNGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0137360_118129312	3300012361	Vadose Zone Soil	MKKYLSLISALVVGCVVFSPCVQVSAQDTRDAKDPKIIGKEEAAKKYPPPNGKSYPSGSDLAVLTGGASGGSTWGYIKSPYSSNVYNCRKGKAH
Ga0137361_104556902	3300012362	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0137390_107413192	3300012363	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0137390_113773752	3300012363	Vadose Zone Soil	MKTYSRLVAALILGCFALGPLANSWAQDTRNAKDAKIITKEEAAKKYPPPNGKSYPPGTDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP*
Ga0137358_103055741	3300012582	Vadose Zone Soil	MKKYSGLVAALVIGCFALAPLAISRAQDTRSAKVPKIIPKEEAMKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSNAHVGDLILDE
Ga0137395_105766312	3300012917	Vadose Zone Soil	MKTYSRLVAALALACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0137395_108305002	3300012917	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGASGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPQ*
Ga0137359_1000302916	3300012923	Vadose Zone Soil	MKKYSGLVAALVIGCFALAPLAISRAQDTRSAKVPKIIPKEEAMKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSNAHVGDLILDESVNKVFVRPP*
Ga0137359_113110842	3300012923	Vadose Zone Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP*
Ga0137416_109213732	3300012927	Vadose Zone Soil	MKTCSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKSKSHVGDLILDESVNKVFVRPP*
Ga0134076_100331522	3300012976	Grasslands Soil	MKTYSRLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGTDLAILSGGAGGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFERPR*
Ga0182041_101967021	3300016294	Soil	MKRYLTLVAALVVGCLALSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGADLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKANVGDLILDESANKVFVRPPVK
Ga0182032_115266851	3300016357	Soil	VEGAIRLSYDNRNFLDMKRYSRLIAGLVVTCLLAGPLVSAWAQDTTNAKQPKIISKEEAAKKYPPPKGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRRGKAHVGDLILDESVNKVF
Ga0182034_100161205	3300016371	Soil	MKRYLTLVAALVVGCLALSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKPYPPGTDLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKANVGDLILDESANKVFVRPPVK
Ga0066655_110412041	3300018431	Grasslands Soil	IVTILYMKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIVSKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0066667_117862001	3300018433	Grasslands Soil	MKRYSGLVAALIIGCFALAPLAISRAQDTRSAKVPKIIPKEEAMKKYPPPNGKQWPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGRSDAHVGDLILDESVNKVFVRPP
Ga0066662_117495802	3300018468	Grasslands Soil	MKRYSGLVAALIIGCFALAPLAISRAQDTRSAKVPKIIPKEEAMKKYPPPNGKQWPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGRSDAHVGDLILDERVNKVFVRPP
Ga0210405_1000148625	3300021171	Soil	MKKYLGLISALVVAAFVLIPLVQVRAQDTRDAKDPKIITKEEAVKKYPPPSGKDYPMGSDLALLSGGAGGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPR
Ga0210405_104767802	3300021171	Soil	MKKYSGLVAALIVGCFALAPLANLWAQDTRDAKDPKIISQEEAAKKYPPQNGKPYPPGNDLALISGGASGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPR
Ga0210402_110800031	3300021478	Soil	MKKYLSLISALVVAAFVFSPVLQVRAQDTRDAKDPKIISKEEAAKKYPLPAGKSYPPGSDLALLTGGAGGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKLFTRPH
Ga0126371_100481246	3300021560	Tropical Forest Soil	MKKYLSVISALVVACVGLSPFVQVCAQDTGNAKDPKIISKEEAAKKYPPPAGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP
Ga0212123_10000043356	3300022557	Iron-Sulfur Acid Spring	MKKYLGLISALVVAAFVFIPLVQVRAQDTRDAKDPKIISKEEATKKYPPPSGKDYPMGSDLALISGGAGGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPR
Ga0212123_101371263	3300022557	Iron-Sulfur Acid Spring	MKKYSGLVAALIVGCFALAPLANSWAQDTRDAKDPKIITQEEAAKKYPPQNGKPYPPGSDLALISGGATGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPR
Ga0212123_106430901	3300022557	Iron-Sulfur Acid Spring	MKKYSGLVAALILGCFALAPLAQSWAQDTRNAKEPKVISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSNAHTGDLILDESVNKVFVRPP
Ga0207684_100184582	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGATGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0207684_105330032	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKTYSRLVAALVVGCFALGPLASSWAQDTRNAKDPKIISKEEAAKKYPPPNGKSYPPGSDLALLTGGASGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0207646_106327611	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTINMKTYSRLVAALVVGCFALGPLASSWAQDTRNAKDPKIISKEEAAKKYPPPNGKSYPPGSDLALLTGGASGGSSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0207646_112811772	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	KYLGLISALVVGCVVFSPCVQVSAQDTRNARDPKIISKEEAAKKYPPPNGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFVRPQ
Ga0207664_104707322	3300025929	Agricultural Soil	MALTCLLLSPLANSWAQDTRNAREPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGASGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPQ
Ga0207651_114153522	3300025960	Switchgrass Rhizosphere	MKRYSTVVAALILGCFALAPLANSLAQDTRNAKEPKIISPQDAAKKYPPPSGKSYPEGSDLAIISGGASGGSTWGYIKSPYSSNVYDCRRGKAHAGDLILDESVNKLFVRPK
Ga0209686_10042444	3300026315	Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209687_100107810	3300026322	Soil	VGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209801_11788272	3300026326	Soil	LVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209473_11014623	3300026330	Soil	VTILYMKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209803_10812732	3300026332	Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIVSKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209057_11683211	3300026342	Soil	NNMKTYSRLVAALVVGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209690_10316753	3300026524	Soil	MKTYSRLVAALVLACFAFGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESANKVFVRPP
Ga0209690_10646002	3300026524	Soil	MKTYSRLVAALVLGCFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGTDLAILSGGAGGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFERPR
Ga0209378_10131881	3300026528	Soil	MKTYSRLVAALVVGCFALGPLANSWAQDTRNAREPKIISKEEAAKKYPPPNGKSYPPGSDLAVLNGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ
Ga0209378_11118933	3300026528	Soil	PLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209378_11950621	3300026528	Soil	MKTYSRLVAALVLACFAFGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLTGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESANK
Ga0209160_10225272	3300026532	Soil	MKTYSRLVAALVLACFAFGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209648_101288753	3300026551	Grasslands Soil	MKTYSRLVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKVHVGDLILDESANKVFVRPQ
Ga0209577_104804692	3300026552	Soil	MKTYSRLVAALVLGCFALGPLANSWAQDTRNAKPAKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP
Ga0209217_100002021	3300027651	Forest Soil	MKKYSGLVAALVFSCFALGPLANSWAQDTRNAKAPKIISKEEAAKKYPPPNGKSYPPGSDLAILTGGAGGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPQ
Ga0209689_100050324	3300027748	Soil	VGCFALGPLANSWAQDTRNAKEPKIVSKEEAAKKYPPPNGKSYPSGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKARVGDLILDESVNKVFVRPR
Ga0209180_100731172	3300027846	Vadose Zone Soil	MKTYSRLVAALVVGCFALGPLAYSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLAILSGGATGGSTWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPQ
Ga0318541_100806703	3300031545	Soil	MKRYLTLVAALVVGCLALSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKPYPPGTDLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVN
Ga0310915_1000060711	3300031573	Soil	MKRYLTLVAALVVGCLALSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKPYPPGTDLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0307476_103825402	3300031715	Hardwood Forest Soil	MKKYKGLISALVVAAFVFIPLVQVRAQDTRDAKDPKIISKEEAAKKYPPPSGKDYPSGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNKVFLRPR
Ga0307469_116930371	3300031720	Hardwood Forest Soil	MKKYSGLVAAFVIGCFALAPLAISRAQDTRSAKVPKVIPKEEAMKKYPPPNGKQWPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGRSDAHVGDLILDESVNKVFVRPP
Ga0307475_106984252	3300031754	Hardwood Forest Soil	MKKYSGLVAALVIGCFALAPLAISRAQDTRNAKEPKIIPKEEAMKKYPPPNGKNWPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESANKVFVRPP
Ga0307473_107782922	3300031820	Hardwood Forest Soil	MKKYSGLVAALVIGCFALAPLAISRAQDTRSAKEPKIIPKEEAMKKYPPPQGKDWPSGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0307478_114786271	3300031823	Hardwood Forest Soil	MKKYKGLISALVVAAFVFIPLVQVRAQDTRDAKDPKIISKEEAAKKYPPPSGKDYPSGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRKGKAHPGDLILDESVNK
Ga0318551_105702561	3300031896	Soil	VVGCLALSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGADLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0306921_113100782	3300031912	Soil	VEGAIRLSYDNRNSLDMKRYSRLIAGLVVTCLLAGPLVSAWAQDTTNAKQPKIISKEEAAKKYPPPKGKSYPPGSDLAVLTGGATGGSTWGYIKSPYSSNVYDCRRGKAHVGDLILDESVNKVFVRPP
Ga0310916_100043552	3300031942	Soil	LSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKPYPPGTDLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPR
Ga0307479_101200622	3300031962	Hardwood Forest Soil	MALTCLLLSPLANTWAQDTRNAKEPKIISKEEAAKKYPPQNGKPYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKAHVGDLILDESANKVFVRPP
Ga0307479_106378442	3300031962	Hardwood Forest Soil	MVLTCFVLGPLANSWAQDTRNAKDPKIISKEEAAKKYPAPNGKSYPPGTDLTVLNGGATGGGSWGYIKSPYSGNVYDCRKGKAHVGDLILDESVNKVFVRPP
Ga0306924_122238092	3300032076	Soil	MKRYLTLVAALVVGCLALSPFAKSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGADLAVLTGGASGGSTWGYIKSPYSSNVYDCRKGKAHVGDLILDESANKVFVRPPVK
Ga0307471_1027612991	3300032180	Hardwood Forest Soil	LVIGCFALAPLAISRAQDTRSAKEPKIIPKEEAMKKYPPPQGKDWPSGSDLTVLNGGATGGGSWGSIKSPYSSNVYDCRKGKAHVGDLILDESVNKVFVRPP
Ga0307471_1031098842	3300032180	Hardwood Forest Soil	MKTYSRLVVAALVLACFALGPLANSWAQDTRNAKEPKIISKEEAAKKYPPPNGKSYPPGSDLTVLNGGATGGGSWGYIKSPYSSNVYDCRKGKSKAHVGDLILDESANKVFVRPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072158

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences