NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072163

Metagenome / Metatranscriptome Family F072163

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072163
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 48 residues
Representative Sequence RDGMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI
Number of Associated Samples 91
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 10.74 %
% of genes near scaffold ends (potentially truncated) 77.69 %
% of genes from short scaffolds (< 2000 bps) 90.08 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.215 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(33.884 % of family members)
Environment Ontology (ENVO) Unclassified
(57.025 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.678 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.00%    β-sheet: 0.00%    Coil/Unstructured: 64.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00563EAL 3.31
PF00166Cpn10 2.48
PF00144Beta-lactamase 1.65
PF00989PAS 0.83
PF00118Cpn60_TCP1 0.83
PF00011HSP20 0.83
PF00196GerE 0.83
PF13426PAS_9 0.83
PF13560HTH_31 0.83
PF08447PAS_3 0.83
PF14499DUF4437 0.83
PF03448MgtE_N 0.83
PF09723Zn-ribbon_8 0.83
PF10609ParA 0.83
PF00589Phage_integrase 0.83
PF01545Cation_efflux 0.83
PF00990GGDEF 0.83
PF00753Lactamase_B 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 3.31
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 3.31
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 3.31
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 3.31
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 2.48
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.65
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.65
COG2367Beta-lactamase class ADefense mechanisms [V] 1.65
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.83
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.83
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.83
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.83
COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)Inorganic ion transport and metabolism [P] 0.83
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.83

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.21 %
UnclassifiedrootN/A5.79 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10021131All Organisms → cellular organisms → Bacteria2322Open in IMG/M
3300005166|Ga0066674_10146359All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1113Open in IMG/M
3300005166|Ga0066674_10202840All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes943Open in IMG/M
3300005166|Ga0066674_10214201All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300005167|Ga0066672_10661587All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium673Open in IMG/M
3300005172|Ga0066683_10315498All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium971Open in IMG/M
3300005172|Ga0066683_10520188All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium726Open in IMG/M
3300005174|Ga0066680_10058593All Organisms → cellular organisms → Bacteria2281Open in IMG/M
3300005174|Ga0066680_10246034All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300005174|Ga0066680_10308676All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1009Open in IMG/M
3300005174|Ga0066680_10695921All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes624Open in IMG/M
3300005177|Ga0066690_10478623All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium840Open in IMG/M
3300005187|Ga0066675_10494672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium913Open in IMG/M
3300005440|Ga0070705_100584480All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium861Open in IMG/M
3300005446|Ga0066686_10638629All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium723Open in IMG/M
3300005450|Ga0066682_10555918All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium725Open in IMG/M
3300005471|Ga0070698_100997831Not Available784Open in IMG/M
3300005536|Ga0070697_101278268All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300005552|Ga0066701_10393421All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium858Open in IMG/M
3300005552|Ga0066701_10604355All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300005552|Ga0066701_10656571All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium633Open in IMG/M
3300005576|Ga0066708_10617072All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium693Open in IMG/M
3300005586|Ga0066691_10003050All Organisms → cellular organisms → Bacteria7000Open in IMG/M
3300005586|Ga0066691_10333238All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium897Open in IMG/M
3300006796|Ga0066665_10243375All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1419Open in IMG/M
3300006800|Ga0066660_10606662All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium914Open in IMG/M
3300006800|Ga0066660_10986360All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium678Open in IMG/M
3300007255|Ga0099791_10478014All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300007265|Ga0099794_10751494All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300009012|Ga0066710_103431900All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium601Open in IMG/M
3300009012|Ga0066710_104179198All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium540Open in IMG/M
3300009038|Ga0099829_10991311All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium697Open in IMG/M
3300009088|Ga0099830_10207056All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1537Open in IMG/M
3300009089|Ga0099828_11245694All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium659Open in IMG/M
3300009137|Ga0066709_102733672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium657Open in IMG/M
3300009814|Ga0105082_1035783All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium803Open in IMG/M
3300010130|Ga0127493_1000687All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1364Open in IMG/M
3300010301|Ga0134070_10080650All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1119Open in IMG/M
3300010301|Ga0134070_10206863All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300010304|Ga0134088_10608215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium544Open in IMG/M
3300010333|Ga0134080_10422480All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium620Open in IMG/M
3300010336|Ga0134071_10477394All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300010337|Ga0134062_10109688All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1193Open in IMG/M
3300010396|Ga0134126_10273652Not Available1991Open in IMG/M
3300011269|Ga0137392_11015719All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium681Open in IMG/M
3300011271|Ga0137393_10147726All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1960Open in IMG/M
3300011271|Ga0137393_11580984All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium545Open in IMG/M
3300012039|Ga0137421_1159134All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium667Open in IMG/M
3300012096|Ga0137389_11526378All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012189|Ga0137388_10072811All Organisms → cellular organisms → Bacteria2869Open in IMG/M
3300012189|Ga0137388_10393797All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1282Open in IMG/M
3300012201|Ga0137365_10224362Not Available1401Open in IMG/M
3300012203|Ga0137399_10445836All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1083Open in IMG/M
3300012205|Ga0137362_11434790All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300012206|Ga0137380_11126037Not Available668Open in IMG/M
3300012206|Ga0137380_11200436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes644Open in IMG/M
3300012207|Ga0137381_11264100All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium631Open in IMG/M
3300012208|Ga0137376_10942711All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium740Open in IMG/M
3300012208|Ga0137376_10977544All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium725Open in IMG/M
3300012208|Ga0137376_11193281All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium650Open in IMG/M
3300012209|Ga0137379_11395200All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300012349|Ga0137387_10624493All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300012349|Ga0137387_10951599All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300012351|Ga0137386_10307993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1140Open in IMG/M
3300012351|Ga0137386_10394315All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes997Open in IMG/M
3300012351|Ga0137386_10431694All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes949Open in IMG/M
3300012356|Ga0137371_10510279All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium927Open in IMG/M
3300012360|Ga0137375_10204435All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1865Open in IMG/M
3300012363|Ga0137390_11392309All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012392|Ga0134043_1090561All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium596Open in IMG/M
3300012401|Ga0134055_1016401All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium635Open in IMG/M
3300012403|Ga0134049_1114368All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium778Open in IMG/M
3300012407|Ga0134050_1400272All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium713Open in IMG/M
3300012972|Ga0134077_10537135All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes522Open in IMG/M
3300012976|Ga0134076_10178146All Organisms → cellular organisms → Bacteria → Proteobacteria883Open in IMG/M
3300014150|Ga0134081_10183558All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium703Open in IMG/M
3300014879|Ga0180062_1164183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium510Open in IMG/M
3300015054|Ga0137420_1032333All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300015054|Ga0137420_1169613All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300015356|Ga0134073_10209381All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300015358|Ga0134089_10112751All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1051Open in IMG/M
3300015358|Ga0134089_10237537All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium742Open in IMG/M
3300017654|Ga0134069_1389635All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium503Open in IMG/M
3300018074|Ga0184640_10026658All Organisms → cellular organisms → Bacteria2258Open in IMG/M
3300018431|Ga0066655_11385612All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium509Open in IMG/M
3300018468|Ga0066662_10993256All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium831Open in IMG/M
3300019257|Ga0180115_1046163All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300019789|Ga0137408_1390611All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300021086|Ga0179596_10645336All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300024330|Ga0137417_1273960Not Available1070Open in IMG/M
3300024330|Ga0137417_1496044All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1505Open in IMG/M
3300026296|Ga0209235_1165333All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium848Open in IMG/M
3300026297|Ga0209237_1044898All Organisms → cellular organisms → Bacteria2273Open in IMG/M
3300026297|Ga0209237_1192525All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium670Open in IMG/M
3300026298|Ga0209236_1249173All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium587Open in IMG/M
3300026301|Ga0209238_1259435All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium519Open in IMG/M
3300026306|Ga0209468_1151295All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium606Open in IMG/M
3300026306|Ga0209468_1155470All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300026313|Ga0209761_1019076All Organisms → cellular organisms → Bacteria4320Open in IMG/M
3300026315|Ga0209686_1120105All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300026317|Ga0209154_1103515All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1212Open in IMG/M
3300026317|Ga0209154_1228077All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium687Open in IMG/M
3300026324|Ga0209470_1077696All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1526Open in IMG/M
3300026325|Ga0209152_10298098All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium603Open in IMG/M
3300026328|Ga0209802_1143010All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1021Open in IMG/M
3300026328|Ga0209802_1228975All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium671Open in IMG/M
3300026524|Ga0209690_1013714All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4253Open in IMG/M
3300026524|Ga0209690_1033231All Organisms → cellular organisms → Bacteria2454Open in IMG/M
3300026529|Ga0209806_1096188All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300026537|Ga0209157_1033539All Organisms → cellular organisms → Bacteria2934Open in IMG/M
3300026540|Ga0209376_1367908All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium540Open in IMG/M
3300026542|Ga0209805_1183667All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium922Open in IMG/M
3300026548|Ga0209161_10051331All Organisms → cellular organisms → Bacteria2695Open in IMG/M
3300027643|Ga0209076_1167513All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300027655|Ga0209388_1123220Not Available739Open in IMG/M
3300027748|Ga0209689_1205664All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium857Open in IMG/M
3300027862|Ga0209701_10265055All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium999Open in IMG/M
3300027862|Ga0209701_10537219All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium630Open in IMG/M
3300027882|Ga0209590_10507670Not Available779Open in IMG/M
3300027882|Ga0209590_10984284All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium527Open in IMG/M
3300031820|Ga0307473_11087655All Organisms → cellular organisms → Bacteria589Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil33.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil32.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.48%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.65%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.83%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014879Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10DEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1002113133300002558Grasslands SoilVWSSRDGMKDYEMDEVAARHLVGELVEMPQFDSEREVEDWLLERGFKVEWI*
Ga0066674_1014635923300005166SoilMKTLRWSSRDGMKDYEMDELAARHLVGELAEMPQFDSEREVEAWFLERGFKLEWI*
Ga0066674_1020284043300005166SoilDPNTGEIVWSSRDGMKDYEIDQLAARHLVGELVEMPQFDSERDVEDWLLERGFKVEWI*
Ga0066674_1021420123300005166SoilMKDYEMDELAARHLVGELVEMPQCESEREVEAWFLERGVKIEWI*
Ga0066672_1066158713300005167SoilAGEIVWSSRDGMKDYEMEELAARHLVGELVEMPPCESEQEIEAWFLKRGFKVEWI*
Ga0066683_1031549813300005172SoilIVWSSRDGMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0066683_1052018823300005172SoilMKDFEMDELAARHLVGELVEMPQFDRERDVEDWLLQRGFKVEWI*
Ga0066680_1005859333300005174SoilMKDYEIEEVVARHLVGELVEMPQCESEREVEDWFLERGFRVEWI*
Ga0066680_1024603433300005174SoilAGEIVWSSRDGMKDYEMEELAARHLAGELVEMPQFESEGEVDDWLLERGFKVEWI*
Ga0066680_1030867613300005174SoilRAFFDPNTSEIAWSSRDGMKDYEIDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI*
Ga0066680_1069592113300005174SoilRDGMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0066690_1047862313300005177SoilMKDYEMDEVAARHLVGELVEMPQFDSEREVEDWLLERGFKVEWI*
Ga0066675_1049467223300005187SoilMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKLEWI*
Ga0070705_10058448023300005440Corn, Switchgrass And Miscanthus RhizosphereYEMDELAARHLAGELVEMPQFESEREVEAWFLARGFNIEWI*
Ga0066686_1063862913300005446SoilKDYEMDELAARHLVGELVEMPQCESEREVEAWLLERGFKVEWI*
Ga0066682_1055591813300005450SoilMKTLRWSSRDGMKDYEMDELAARHLVGELVEMPQFESERDVEAWLLERGFKVEWI*
Ga0070698_10099783113300005471Corn, Switchgrass And Miscanthus RhizosphereFFDPNTSEIVWSSRDGMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLARGVTIEWI
Ga0070697_10127826813300005536Corn, Switchgrass And Miscanthus RhizosphereWSSRDGMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGLKIEWI*
Ga0066701_1039342133300005552SoilEMDQLAARHLAGELEEMPQCKSEREVETWFLERGFKVEWI*
Ga0066701_1060435523300005552SoilGEIVWSSRDGMKDYEMEELAARHLAGELVEMPQFESEQEVEDWFLEHGFKVEWI*
Ga0066701_1065657133300005552SoilSRDGMKDYEMEELAARHLAGELVEMPQCESEREVEDWFLERGFRVEWI*
Ga0066708_1061707233300005576SoilTGEIVWSSRDGMKDYELDDLAARHLVGELVEMPQFDSERDVEDWLLERGFKVEWI*
Ga0066691_1000305053300005586SoilGMKDYEMDELAARHLAGELVEMPQFESEREVEGWFLERGFKVEWI*
Ga0066691_1033323833300005586SoilGEIVWSSRDGMKDYEMEELAARHLAGELVEMPQCESEREVEDWFLERGFRVEWI*
Ga0066665_1024337543300006796SoilMKDYEIDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI*
Ga0066660_1060666213300006800SoilKAGEIVWSSRDGMKDYEMEELAARHLVGELVEMPPCESEQEVEAWFLKRGFKVEWI*
Ga0066660_1098636013300006800SoilKAGEIVWSSRDGMKDYEMEELAARHLVGELVEMPPCESEQEIEAWFLKRGFKVEWI*
Ga0099791_1047801423300007255Vadose Zone SoilDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI*
Ga0099794_1075149423300007265Vadose Zone SoilDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI*
Ga0066710_10343190013300009012Grasslands SoilEIVWSSRDGMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI
Ga0066710_10417919823300009012Grasslands SoilDIVWSSRDGMKDYEMDEVAARHLIGELMEMPQFESEREVEDWFVERGFKVEWI
Ga0099829_1099131113300009038Vadose Zone SoilNAGDIVWSSRDGMKDYEMDEVAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0099830_1020705643300009088Vadose Zone SoilSRDGMKDYEMDELAARHLAGELVEMPQFESERDVEDWLLQRGFKVEWI*
Ga0099828_1124569413300009089Vadose Zone SoilAFFDPNTSEIVWSSRDGMKDYEMDELAARHLVGELVEMPQCESEREVEAWFLERGFKIEWI*
Ga0066709_10273367223300009137Grasslands SoilMKDYEMDELVEMPQFDSERDVEDWLLQRGFKVEWI*
Ga0105082_103578323300009814Groundwater SandMKDYEMEELVARHLAGELVEMPQFEGEREVENWFLKRGFKVEWI*
Ga0127493_100068733300010130Grasslands SoilLAARHLVGELVELPQFDSARDVEDWLLERGFKVEWI*
Ga0134070_1008065023300010301Grasslands SoilMRDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0134070_1020686313300010301Grasslands SoilDPNTGEIVWSSRDGMKDYEMDQFAARHLVGELVEMPQFESEREVEDWLLERGFQVEWI*
Ga0134088_1060821523300010304Grasslands SoilDGMKDYEMEELAARHLAGELVEMPQFESEQEVEDWFLEHGFKVEWI*
Ga0134080_1042248013300010333Grasslands SoilMKDFEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKLEWI*
Ga0134071_1047739413300010336Grasslands SoilNRDGMKDYEMEELAARHLVGELVEMPQFESEREVEDWFLERGFQVEWI*
Ga0134062_1010968833300010337Grasslands SoilKDYEMDELAARHLVGELVEMPQCESERQVEDWFLERGFKVEWI*
Ga0134126_1027365213300010396Terrestrial SoilEMDELAARHLAGELVEMPQFESEREVEAWFLERGLKIEWI*
Ga0137392_1101571913300011269Vadose Zone SoilLAARHLAGELVEMPQFESEGEVDDWLLERGFKVEWI*
Ga0137393_1014772623300011271Vadose Zone SoilVWSSRDGMKDYERDEVAARHLVGELVEMPQFESEREVEDWLFERGFQVEWI*
Ga0137393_1158098423300011271Vadose Zone SoilEIVWSSRDGMKDYEMEELAARHLVGELVEMPQFEGEREVEDWFLKRGFEVEWI*
Ga0137421_115913413300012039SoilIVWSSRDGMKDYEMEELEARHLVGELVEIPQFESEREVEDWFLERGFKVEWI*
Ga0137389_1152637823300012096Vadose Zone SoilYEMDDVAARHLVGELVEMPQFESEREVDDWFLERGFKVEWI*
Ga0137388_1007281113300012189Vadose Zone SoilSRDGMKDYERDEVAARHLVGELVEMPQFESEREVEDWLRKRGFQVEWI*
Ga0137388_1039379743300012189Vadose Zone SoilPNTSEIVWSSRDGMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKIEWI*
Ga0137365_1022436233300012201Vadose Zone SoilFFDPNTGEIVWSSRDGMKDYEMDQLAARHLAGELEEMPQCKSEREVETWFLERGFKVEWI
Ga0137399_1044583623300012203Vadose Zone SoilMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI*
Ga0137362_1143479023300012205Vadose Zone SoilLAARHLAGELVEMPQFESEREVEAWLLERGFKVEWI*
Ga0137380_1112603723300012206Vadose Zone SoilEELAARHLAGELVEMPQFEREREVENWLLERGFKVEWI*
Ga0137380_1120043623300012206Vadose Zone SoilNTGEIVWSSRDGMKDYEMDELAARHLAGELVEMPQFESERDVEAWFLERGFKVEWI*
Ga0137381_1126410013300012207Vadose Zone SoilELAARHLVGELVEMPQFDSERDVEDWLLGRGFKVEWI*
Ga0137376_1094271123300012208Vadose Zone SoilMKDYEMEELAARHLAGELVEMPQFESEREIENWFLKRGFNVEWI*
Ga0137376_1097754433300012208Vadose Zone SoilAARHLVGELVEMPQFDSERDVEDWLLERGFKVEWI*
Ga0137376_1119328113300012208Vadose Zone SoilMKDYEMDEVAARHLVGELAEMPQFESERDVEDWLLERGFKVEW
Ga0137379_1139520023300012209Vadose Zone SoilSRDGMKDYEMDEVAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0137387_1062449313300012349Vadose Zone SoilIVWSSRDGMKDYEMDQLAARHLAGELEEMPQCKSEREVETWFLERGFKVEWI*
Ga0137387_1095159923300012349Vadose Zone SoilFLDPNAGEIVWSSRDGMKDYEMEELAARHLAGELVEMPHFESEREVETWFLKRGFEVEWI
Ga0137386_1030799343300012351Vadose Zone SoilSSRDGMKDYEMEELAARHLVGELVEMPQFDSERDVEDWLLERGFKVEWI*
Ga0137386_1039431543300012351Vadose Zone SoilEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI*
Ga0137386_1043169413300012351Vadose Zone SoilSSRDGMKDYEMDELAARHLAGELVEMPQFESERDVEAWFLERGFKVEWI*
Ga0137371_1051027923300012356Vadose Zone SoilMKDYEMDGLAARHLVGELAEMPQFESEREVEDWFLERGFKVEWI*
Ga0137375_1020443513300012360Vadose Zone SoilAGEIVWSSRDGMKDHEMDELVARHLVGELVEMPPFESEREVEDWFLKRGFKVEWV*
Ga0137390_1139230923300012363Vadose Zone SoilMKDYEMEELAARHLVGELVEMPQFESEREVDDWFLERGFKVEWI*
Ga0134043_109056113300012392Grasslands SoilSMKTLRWSSRDGMKDYEMDELAARHLVGELAEMPQFDSEREVEAWFLERGFKVEWI*
Ga0134055_101640113300012401Grasslands SoilMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0134049_111436813300012403Grasslands SoilSRDGMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0134050_140027223300012407Grasslands SoilMKDYEMEELAARHLVGELVEMPQCESEREVEDWFLERGFK
Ga0134077_1053713513300012972Grasslands SoilIVWSSRDGMKDYEMEELAARHLVGELVEMPQFDSEREVEDWFLERGFKVEWI*
Ga0134076_1017814633300012976Grasslands SoilMKDYEMEELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0134081_1018355823300014150Grasslands SoilMKDYEMEQLAARHLAGELVEMPQCESEREVEDWFLERGF
Ga0180062_116418313300014879SoilIVWSSRAGMKDYEMEELEARHLVGELVEMPQFESEREVEDWFLERGFKVEWI*
Ga0137420_103233313300015054Vadose Zone SoilDGMKDMKDYELDELAARHLAGELVEMPQCETEREVEAWLLERGFKVEWI*
Ga0137420_116961323300015054Vadose Zone SoilWSNRDGMKDYELDELAARHLAGELVEMPQFESEREVEAWLLERGFKVEWI*
Ga0134073_1020938123300015356Grasslands SoilMKTLRWSSRDGMKDYEMDELAARHLVGELAEMPQFNSEREVEAWFLERGFKLEWI*
Ga0134089_1011275113300015358Grasslands SoilDGMKDYEMDELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI*
Ga0134089_1023753723300015358Grasslands SoilMKDYEIDQLAARHLVGELVELPQFDSARDVEDWLLERGFKV
Ga0134069_138963513300017654Grasslands SoilIVWSSRDGMKDYEMEGLAARHLVGELVEMPQCESERQVEDWFLERGFKVEWI
Ga0184640_1002665813300018074Groundwater SedimentEMEELAARHLVGELVEMPQFESEREVEDWFLERGFKVEWV
Ga0066655_1138561223300018431Grasslands SoilMKTLRWSSRDGMKDYEMDELAARHLVGELAEMPQFDSEREVEAWFLERGFKLEWI
Ga0066662_1099325613300018468Grasslands SoilSRDGMKDYEMDQLAARHLAGELEEMPQCKSEREVETWFLERGFKVEWI
Ga0180115_104616313300019257Groundwater SedimentGMKDYEMEELEARHLVGELVEMPQFESEREVEEWFLERGFKVEWI
Ga0137408_139061153300019789Vadose Zone SoilSSRDGMKDYEMDEVAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI
Ga0179596_1064533623300021086Vadose Zone SoilFFDPNTSEIVWSSRDGMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKIEWI
Ga0137417_127396013300024330Vadose Zone SoilVWSNRDGMKDYEMEDLAARHLAGELVEMPQCESEREVEDWFLGRGFRVEWI
Ga0137417_149604413300024330Vadose Zone SoilMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI
Ga0209235_116533323300026296Grasslands SoilMKDYEMDELVEMPQFDSEREVEDWLLERGFKVEWI
Ga0209237_104489823300026297Grasslands SoilVWSSRDGMKDYEMDQLAARHLAGELEEMPQCKSEREVETWFLERGFKVEWI
Ga0209237_119252533300026297Grasslands SoilYEMDEVAARHLVGELVEMPQFDSEREVEDWLLERGFKVEWI
Ga0209236_124917323300026298Grasslands SoilVEELAARHLAGELVEMPQFESEQEVEDWFLEHGFKVEWI
Ga0209238_125943513300026301Grasslands SoilLAARHLAGELEEMPQCKSEREVETWFLERGFKVEWI
Ga0209468_115129513300026306SoilSSDGMKDYEIDQLAARHLVGELVEMPQFDSERDVEDWLFERGFKVEWI
Ga0209468_115547023300026306SoilMKTLRWSSRDGMKDYEMDELAARHLVGELVEMPQFESERDVEAWLLERGFKVEWI
Ga0209761_101907613300026313Grasslands SoilVWSSRDGMKDYEMDEVAARHLVGELVEMPQFEGERDVEDWFLKRGFNVEWI
Ga0209686_112010523300026315SoilSNRDGMKDYEMEELAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI
Ga0209154_110351513300026317SoilPKAGEIVWSSRDGMKDYEMEELAARHLVGELVEMPPCESEQDVEAWFLKRGFKVEWI
Ga0209154_122807713300026317SoilPKAGEIVWSSRDGMKDYEMEELAARHLVGELVEMPPCESEQEIEAWFLKRGFKVEWI
Ga0209470_107769613300026324SoilDYEMDELAARHLVGELAEMPQFDSEREVEAWFLERGFKLEWI
Ga0209152_1029809813300026325SoilDGMKDYEMDELVEMPQFDSERDVEDWLLQRGFKVEWI
Ga0209802_114301013300026328SoilMWSSRDGMKDYEMEELAARHLVGELVEMPQFESEQEVEDWFLERGFKVEWV
Ga0209802_122897523300026328SoilLAARHLAGELVEMPQFESEGEVDDWLLERGFKVEWI
Ga0209690_101371443300026524SoilMKDYEIDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI
Ga0209690_103323153300026524SoilEMDEVAARHLVGELVEMPQFDSEREVEDWLLERGFKVEWI
Ga0209806_109618813300026529SoilDRDGMKDYEMEELAARHLVGELVEMPQFESEREVEDWFLERGFKVEWI
Ga0209157_103353923300026537SoilMDQFAARHLVGELVEMPQFESEREVEDWLLERGFQVEWI
Ga0209376_136790813300026540SoilDGMKDYEMDELAARHLVGELVEMPPCESEQEVEAWFLKRGFKVEWI
Ga0209805_118366713300026542SoilPKAGEIVWSSRDGMKDYEMEELAARHLVGELVEMPPCESEQEVEAWFLKRGFKVEWI
Ga0209161_1005133133300026548SoilEELAARHLVGELVEMPQFESEREVEDWFLERGFKVEWI
Ga0209076_116751323300027643Vadose Zone SoilDPNTGEIVWSNRDGMKDYELDELAARHLAGELVEMPQFESEREVEAWFLERGFKIEWI
Ga0209388_112322023300027655Vadose Zone SoilDELAARHLAGELVEMPQFESEREVEAWFLERGFKVEWI
Ga0209689_120566423300027748SoilFFDPNAGDIVWSSRDGMKDYEMDEVAARHLVGELVEMPQCESEREVEDWFLERGFKVEWI
Ga0209701_1026505513300027862Vadose Zone SoilIVWSSRDGMKDYEMDDVAARHLVGELVEMPQFESEREVEAWFLERGFKVEWI
Ga0209701_1053721913300027862Vadose Zone SoilSSRDGMKDYERDEVAARHLVGELVEMPQFESEREVEDWLLKRGFQVEWI
Ga0209590_1050767023300027882Vadose Zone SoilSEIVWSSRDGMKDYEMDELAARHLAGELVEMPQFESEREVEAWFLERGFKIEWI
Ga0209590_1098428413300027882Vadose Zone SoilELAARHLAGELVEMPQFESEREVEGWFLERGFKVEWI
Ga0307473_1108765513300031820Hardwood Forest SoilELAARHLAGELVEMPQFESEQEVEAWFLGRGVKIEWI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.