Metagenome / Metatranscriptome Family F072190

Basic Information
Family ID	F072190
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	94 residues
Representative Sequence	FAVVFYGYHDLIRSGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK
Number of Associated Samples	105
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.50 %
% of genes near scaffold ends (potentially truncated)	32.23 %
% of genes from short scaffolds (< 2000 bps)	29.75 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (66.942 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.529 % of family members)
Environment Ontology (ENVO)	Unclassified (23.140 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.587 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122. 1GPICC_00218360 2FW301_10131962 3INPhiseqgaiiFebDRAFT_1016584481 4INPhiseqgaiiFebDRAFT_1050307251 5F14TC_1008759891 6JGI1027J11758_117163531 7JGI1027J12803_1006570381 8Ga0055489_101897962 9Ga0063356_1032093252 10Ga0066395_102984411 11Ga0062591_1029440832 12Ga0066685_109249072 13Ga0066676_102886451 14Ga0066675_109256321 15Ga0070690_1010799552 16Ga0066388_1015491071 17Ga0066388_1015495541 18Ga0066388_1085822651 19Ga0070677_107831061 20Ga0068869_1010841901 21Ga0070689_1005479811 22Ga0070673_1009619232 23Ga0070705_1015799002 24Ga0068867_1006164551 25Ga0066701_109271372 26Ga0066705_103134121 27Ga0066691_102679402 28Ga0066706_113402991 29Ga0066706_114457672 30Ga0068859_1019390232 31Ga0066903_1005806952 32Ga0068862_1020222641 33Ga0066651_106566851 34Ga0066656_101650192 35Ga0075417_106996352 36Ga0066658_100485552 37Ga0066659_108829242 38Ga0079220_106691582 39Ga0075428_1004600332 40Ga0075421_1002165921 41Ga0075421_1013002762 42Ga0075431_1003164312 43Ga0075433_110048332 44Ga0075420_1007500911 45Ga0075434_1000292251 46Ga0075429_1000347171 47Ga0075419_108903252 48Ga0075435_1014626921 49Ga0066710_1004741082 50Ga0105245_112252182 51Ga0075418_100883253 52Ga0075418_105568252 53Ga0114129_106989501 54Ga0105242_128526371 55Ga0126380_108986372 56Ga0126380_119159941 57Ga0126382_105128631 58Ga0134084_100910471 59Ga0126376_107739312 60Ga0126376_123786311 61Ga0126372_116912222 62Ga0126379_111137251 63Ga0126381_1019390201 64Ga0126383_115195942 65Ga0126383_129659662 66Ga0126383_131673811 67Ga0134122_111270432 68Ga0134121_118984881 69Ga0137313_10639902 70Ga0137314_11226492 71Ga0137452_11386212 72Ga0137421_12029282 73Ga0137319_10617982 74Ga0150985_1023302812 75Ga0134056_12743592 76Ga0134059_12774022 77Ga0137396_102845272 78Ga0137394_101663012 79Ga0126369_123157002 80Ga0134077_101612312 81Ga0134081_101113421 82Ga0134075_103290801 83Ga0134073_102018631 84Ga0134089_102210582 85Ga0132258_115365362 86Ga0132258_136986271 87Ga0132255_1019924441 88Ga0132255_1025112061 89Ga0132255_1035228901 90Ga0182032_119853912 91Ga0182040_109802962 92Ga0182039_102370362 93Ga0134112_103814942 94Ga0184640_103684221 95Ga0210408_113243112 96Ga0193719_102466191 97Ga0222622_111437091 98Ga0247784_10300941 99Ga0207700_118635241 100Ga0207701_105078071 101Ga0207690_110221832 102Ga0207686_103406741 103Ga0207689_104730581 104Ga0209350_10850931 105Ga0209235_10841213 106Ga0209468_11414942 107Ga0209472_12604702 108Ga0209376_10852722 109Ga0207428_104160002 110Ga0207428_110017652 111Ga0209382_110490882 112Ga0310813_103599411 113Ga0310813_115429901 114Ga0307469_110054482 115Ga0307469_125421331 116Ga0310917_106193012 117Ga0310909_113453791 118Ga0307472_1013550902 119Ga0306920_1029228921 120Ga0310812_101169901 121Ga0364929_0346876_3_266
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122. 1GPICC_00218360 2FW301_10131962 3INPhiseqgaiiFebDRAFT_1016584481 4F14TC_1008759891 5Ga0055489_101897962 6Ga0063356_1032093252 7Ga0066395_102984411 8Ga0066685_109249072 9Ga0066676_102886451 10Ga0066675_109256321 11Ga0070690_1010799552 12Ga0066388_1015495541 13Ga0066388_1085822651 14Ga0070677_107831061 15Ga0070689_1005479811 16Ga0070673_1009619232 17Ga0070705_1015799002 18Ga0068867_1006164551 19Ga0066706_113402991 20Ga0068862_1020222641 21Ga0066656_101650192 22Ga0066659_108829242 23Ga0079220_106691582 24Ga0075420_1007500911 25Ga0075435_1014626921 26Ga0105245_112252182 27Ga0126380_108986372 28Ga0126383_129659662 29Ga0134122_111270432 30Ga0134121_118984881 31Ga0137313_10639902 32Ga0137314_11226492 33Ga0132255_1035228901 34Ga0182040_109802962 35Ga0134112_103814942 36Ga0247784_10300941 37Ga0207700_118635241 38Ga0207689_104730581 39Ga0307469_125421331
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1Ga0126379_111137251 2GPICC_00218360 3FW301_10131962 4JGI1027J12803_1006570381 5Ga0055489_101897962 6Ga0063356_1032093252 7Ga0066395_102984411 8Ga0066676_102886451 9Ga0070677_107831061 10Ga0070689_1005479811 11Ga0070673_1009619232 12Ga0070705_1015799002 13Ga0068867_1006164551 14Ga0066691_102679402 15Ga0066706_114457672 16Ga0068862_1020222641 17Ga0066656_101650192 18Ga0066658_100485552 19Ga0066659_108829242 20Ga0075420_1007500911 21Ga0105245_112252182 22Ga0126380_108986372 23Ga0126376_107739312 24Ga0126372_116912222 25Ga0126383_129659662 26Ga0134122_111270432 27Ga0134121_118984881 28Ga0137313_10639902 29Ga0137319_10617982 30Ga0137394_101663012 31Ga0126369_123157002 32Ga0134073_102018631 33Ga0132258_115365362 34Ga0132255_1035228901 35Ga0182032_119853912 36Ga0182040_109802962 37Ga0182039_102370362 38Ga0134112_103814942 39Ga0184640_103684221 40Ga0247784_10300941 41Ga0207686_103406741 42Ga0307469_125421331 43Ga0310909_113453791 44Ga0310812_101169901 45Ga0364929_0346876_3_266
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.68% β-sheet: 0.00% Coil/Unstructured: 47.32%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
a.250.1.1: IpaD-like	d3nfta_	3nft	0.68228
a.2.7.0: automated matches	d6p24c1	6p24	0.67811
a.238.1.0: automated matches	d3ok8a_	3ok8	0.66747
a.7.1.1: Spectrin repeat	d1cuna2	1cun	0.66363
a.24.8.1: Proteasome activator	d1yaro_	1yar	0.66026

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02142	MGS	91.74
PF08281	Sigma70_r4_2	1.65
PF13414	TPR_11	0.83
PF03841	SelA	0.83
PF04542	Sigma70_r2	0.83
PF00069	Pkinase	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.31
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	33.06 %
Unclassified	root	N/A	66.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	33.06 %
Unclassified	root	N/A	66.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.06 %
Unclassified	root	N/A	66.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	66.94 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Unclassified	root	N/A	66.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Unclassified	root	N/A	66.94 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105030725	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300004633\|Ga0066395_10298441	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300005332\|Ga0066388_101549554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300005332\|Ga0066388_108582265	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300005340\|Ga0070689_100547981	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300005440\|Ga0070705_101579900	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300005598\|Ga0066706_11340299	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005598\|Ga0066706_11445767	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300005764\|Ga0066903_100580695	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300006049\|Ga0075417_10699635	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.07%
Host-Associated	Host-Associated	28.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	7.44%
Plants	Host-Associated → Plants	28.93%
Terrestrial	Environmental → Terrestrial	63.64%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Marine	Environmental → Aquatic → Marine	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.01%
Sediment	Environmental → Aquatic → Sediment	5.79%
Soil	Environmental → Terrestrial → Soil	61.98%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.05%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.53%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.65%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000178	Pristine groundwater from Oak Ridge Integrated Field Research Center, Tennessee (resequenced)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M

Showing 1 to 10 of 105 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_00218360	2067725002	Soil	CAAAAMSDPKLDSFIASQANSFAVVFYGYHELIRKATSTDFLKVRSEESRRLLVRLQRSSELPNRTTAIETSPQYGIASIAFSHAVTDVANVWFHIWKTVNGDLR
FW301_10131962	3300000178	Groundwater	REGNLPGFLRVRADERERLLNRLRRSSELPDKTPAIEMSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLR*
INPhiseqgaiiFebDRAFT_1016584481	3300000364	Soil	YGHHDLIRMGDLAGFLKVRSAEREQLFRRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
INPhiseqgaiiFebDRAFT_1050307251	3300000364	Soil	AIRDAGCAVAAMSDPKLDPLIASQAKNFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLNRSSELPDRTNAIEVSPQYGIASIAFSHAVTDVANVWFHIWKAVNGDLR*
F14TC_1008759891	3300000559	Soil	HDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFYIWKAADGDIK*
JGI1027J11758_117163531	3300000789	Soil	AAAAMSDPRLDSLIGSQANKFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLNRSSELPDRTNAIEVSPQYGIASIAFSHAVTDVANVWFHIWKAVNGDLR*
JGI1027J12803_1006570381	3300000955	Soil	NRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK*
Ga0055489_101897962	3300004145	Natural And Restored Wetlands	PDLDSIAASNASKFVVVFYGFHPEIEKGDLAAYLRTRTEEHERLLRRLRRSSELPDRLESIENSPQFGIAAIAFSHAVTDVANVWLHIWKSVNGASN*
Ga0063356_1032093252	3300004463	Arabidopsis Thaliana Rhizosphere	LIRARNLSGFLAARNEERRRLSARFQRSAELPDRNDVVETSPRFGIASVAYSHAVTDVTNVWYLIWQTANGDSK*
Ga0066395_102984411	3300004633	Tropical Forest Soil	VAALNDPNLDSLVDANAAKFSVVFYGYHERILAGDLAGFLQIRTQERQQLLRRLNRSSELPDRNSNVETSPNYGIASIAFSHAATDVVNVWFHIWKESHGDLQ*
Ga0062591_1029440832	3300004643	Soil	AAMSDPRLDPLIASQADKFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLNRSSELPDRTTAIETSPQYGIASIAFSHAVTDVANVWFHIWKTVNGDLR*
Ga0066685_109249072	3300005180	Soil	GYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH*
Ga0066676_102886451	3300005186	Soil	AALNDPRLDSVVSSQVNAFAVVFYGYHDLIRDGDLAGFLRVRAEERERLFRRLRRSSELPDRTNEIELSPQFGIASIAFSHAVTDVANIWFHIWRTVNGDLR*
Ga0066675_109256321	3300005187	Soil	GDLAGFLNARREEREHLFNRLRRSSELPDLNSVIETSPRFGIASIAYSHAVTDVANVWFHIWKAVNGDLN*
Ga0070690_1010799552	3300005330	Switchgrass Rhizosphere	YDEQIRAGNLANFLKTRADERQRLFTRLRRSSELPDRNTAVETSPQYGIAAIALSHAVTDVANVWFHIWRTANGEVK*
Ga0066388_1015491071	3300005332	Tropical Forest Soil	AAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0066388_1015495541	3300005332	Tropical Forest Soil	ASIAAMRDAACAVAMLNDPQLDSLVSAQAKNFAVVFYGYHDLIRAGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0066388_1085822651	3300005332	Tropical Forest Soil	RGADLSAAVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRQGDLTGFLKVRSAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLAFSHAVTDVANVWVYIWKAANTNPK*
Ga0070677_107831061	3300005333	Miscanthus Rhizosphere	NMDALVNTNAPKFEVVFYGYHDRILAGDLAGFLRIRAQERDQLRRRLNRSSELPNRNNTVETSPDFGIASIAFSHAATDVVNVWFHIWKQSRGDLR*
Ga0068869_1010841901	3300005334	Miscanthus Rhizosphere	EVVFYGYHDLIQAGNLSDFLKSRSEERERLFSRLRRSSELPDRSDSIETSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0070689_1005479811	3300005340	Switchgrass Rhizosphere	IRDAGCAAAVLNDPQLDSLIAAQVNNFTLVFYGYDEQIRAGNLANFLKTRADERQRLFTRLRRSSELPDRNTAVETSPQYGIAAIALSHAVTDVANVWFHIWRTANGEVK*
Ga0070673_1009619232	3300005364	Switchgrass Rhizosphere	GFDERIVKGDLKGFLKARTEESERLLQRLRRYSELPDKTTAIETSPQYGIASIAFSHAVTDVANVWYHIWKQAQGDLRQE*
Ga0070705_1015799002	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ASIRDAGCAVAALNDPQLDSLVAAQANKFAVVFYGYHDSIRAGNLPAFLKVRSEERERLFRRLHRSSELPDRNDVVETSSQFGIASIAISHAVTDVANIWFHIWNTANKR*
Ga0068867_1006164551	3300005459	Miscanthus Rhizosphere	ANRFAVVFYGYHDLIQTGNLGDFLKTRAEERERLFARLRRSSELPDRSDSIETSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0066701_109271372	3300005552	Soil	SLVAGQAEKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH*
Ga0066705_103134121	3300005569	Soil	LTARREERDRLFTRLRRSSELPDRNNVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0066691_102679402	3300005586	Soil	FAVVFYGYHQLITDGDLAGFLNARREERERLFTRLRRSSELPDRNNVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0066706_113402991	3300005598	Soil	AAAALNDPQLDSLVAAQAEKFTVVFYGYHELITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0066706_114457672	3300005598	Soil	ASVAAIRDAACAAAALNDPKLDSLVSAQASKFSVVFYGYHDLILAGDLTGFLKVRSEERDRLFSRLRRSSELPDRYDAIETSPQFGIASIAFSHAVTDVANIWFHIWKQVNGDLK*
Ga0068859_1019390232	3300005617	Switchgrass Rhizosphere	DSLIASQADNFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLDRLQRSSNLPDRTNAIETSPKYGIASIAFSHAVTDVANVWFHIWKTVNGDLR*
Ga0066903_1005806952	3300005764	Tropical Forest Soil	AALNDPQLDSFVAAQSSKFEVVFYGHHDLIRAGDLAGFLKARAAERERLFSRLRRSSELPNRNDTVENSPQFGIASIALSHAVTDVANVWSYIWKATNADLK*
Ga0068862_1020222641	3300005844	Switchgrass Rhizosphere	LSDPQIDSFVAAQANKFEVVFYGFHDLIRAGRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR*
Ga0066651_106566851	3300006031	Soil	LITNGDLAGFLTARREERDRLFTRLRRSSELPDRSSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0066656_101650192	3300006034	Soil	YHDLIRAGNFAGFLKARAEERERLFSRLKRSSELPNRNDAVETSPQFGIASIALSHAATDVANVWFHIWKSANGDLR*
Ga0075417_106996352	3300006049	Populus Rhizosphere	ALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0066658_100485552	3300006794	Soil	AGCATAALNDPQLDSLVAAQAGKFSVVFYGYHQLIRTGDLAGFLNARQEEREHLFNRLRRSSELPDLNSVIETSPQFGIASIAYSHAVTDVANVWFHIWKAVNGDLN*
Ga0066659_108829242	3300006797	Soil	AAMRDAGCAAAALNDPQLDSLVATQSGKFSVVFYGYHDLIRTGDLPGFLNTRSTERERLFNRLRRSSELPNRNNVIETSPQFGIAAIAYSHAVTDVANVWFHIWKAVNGDLR*
Ga0079220_106691582	3300006806	Agricultural Soil	SKFAAVFYGYHELIRTGDLPGYLNVRREERERLLSRLRRSAELPDRDSAIERSSQFGIASIAYSHAVTDVANIWFHIWKTANGDLN*
Ga0075428_1004600332	3300006844	Populus Rhizosphere	NDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075421_1002165921	3300006845	Populus Rhizosphere	VRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075421_1013002762	3300006845	Populus Rhizosphere	AALNDPHLDSLVAAQVNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK*
Ga0075431_1003164312	3300006847	Populus Rhizosphere	HDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075433_110048332	3300006852	Populus Rhizosphere	GDLSAAVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075420_1007500911	3300006853	Populus Rhizosphere	AMRDAGCAIAEMSDPRLDSLVSAQSSRFAVVFYGYHPTIQAGNLAEFVKVRKEESERLLRRLRRSSELPDRYTDVETSPQFGIASIAFSHAVTDVANVWYYIWKSVNGDLKE*
Ga0075434_1000292251	3300006871	Populus Rhizosphere	AGCAAAALNDPQLDSLVATQSGNFSVVFYGYHDLIRTGDLPGFLNARSTERERLFNRLRRSSELPNRNNVIETSPQFGIAAIAYSHAVTDVANVWFHIWKAVNGDLR*
Ga0075429_1000347171	3300006880	Populus Rhizosphere	QLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075419_108903252	3300006969	Populus Rhizosphere	DSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFRRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075435_1014626921	3300007076	Populus Rhizosphere	GFLTTRAEERERLLARLRRSSELPDRTDAVETSPNFGIASIAISHAVTDVTNIWFHIWSSANGDLK*
Ga0066710_1004741082	3300009012	Grasslands Soil	MAASVTAIRDAGCAVAVLNDPQLDSLVGAQADKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH
Ga0105245_112252182	3300009098	Miscanthus Rhizosphere	SLVASQASAFAVVFYGYHDLIQSGDLPGFLKVRSEERERLFSRLRRSSELPDRDNKVETSPKFGIASIAFSHAVTDVANVWFHIWKTAGGGSQ*
Ga0075418_100883253	3300009100	Populus Rhizosphere	AVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075418_105568252	3300009100	Populus Rhizosphere	AVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0114129_106989501	3300009147	Populus Rhizosphere	AVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0105242_128526371	3300009176	Miscanthus Rhizosphere	VSVAAIRDAGCAAAALNDPQLDALVSTQANKFEVVFYGYHDLIHAGDLAGFLRTRAEERDRLFGRLRRSSELPDRYNALETSSQFGIAAIAFSHAVTDVANVWLHIWKIANGDLK*
Ga0126380_108986372	3300010043	Tropical Forest Soil	AGDLAGFLKVRNAERERLFSRLRRSSELPDRNDTVENSPQFGIASIALSHAVTDVANVWTYIWKTTNTGTK*
Ga0126380_119159941	3300010043	Tropical Forest Soil	SQADNFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLHRSSELPDRTNAIEISPQYGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126382_105128631	3300010047	Tropical Forest Soil	NDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLAFSHAVTDVANVWVYIWKAANTNPK*
Ga0134084_100910471	3300010322	Grasslands Soil	GCAAAALNDPQLDSLVAAQAGKFTVVFYGYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0126376_107739312	3300010359	Tropical Forest Soil	LVAAQSNKFAVVFYGHHDLIRMGDLAGFLKVRSEEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANSNPK*
Ga0126376_123786311	3300010359	Tropical Forest Soil	ARNFAVVFYGYHDLIRAGNLDGFLKARAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126372_116912222	3300010360	Tropical Forest Soil	AVAKLNDPQLDGLVAAQAGKFAVVFYGYHDLIRSGDLAGFLKARRDERERLFSRLRRSAELPDRDTAVEKSSQFGIASIAYSHAVTDVANVWFHIWKTVNGDLK*
Ga0126379_111137251	3300010366	Tropical Forest Soil	FAVVFYGYHDLIRSGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126381_1019390201	3300010376	Tropical Forest Soil	AVAAVRDAGCAVAALNDPQLDSLVAAQSNKFAVVFYGHHDLIRMGDLAGFLKVRSEEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0126383_115195942	3300010398	Tropical Forest Soil	ANNFAVVFYGYHDLIRAGNLDGFLKTRADEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126383_129659662	3300010398	Tropical Forest Soil	AQSSKFEVVFYGHHDLIRAGDLAGFLKARAAERERLFSRLRRSSELPNRNDTVENSPQFGIASIALSHAVTDVANVWSYIWKATNADLK*
Ga0126383_131673811	3300010398	Tropical Forest Soil	GLVAAQAAKFAVVFYGYHDLIRNGDLAGFLKIRREERERLFSRLRRSAELPDRDDAIEKSSQFGIASIAYSHAVTDVANVWFHIWKTANGDLR*
Ga0134122_111270432	3300010400	Terrestrial Soil	SLIATQANNYAVVFYGYHDLIRKGDLNGFLRIRSDESRRLLNRLHRSSELPERTTAIELSPQYGIASIAFSHAVTDVTNVWFHIWKTVNGDLR*
Ga0134121_118984881	3300010401	Terrestrial Soil	KKGDLNGFLKVRSEESRRLFDRLQRSSDLPDRTTAIETSPKYGIASIAFSHAVTDVANVWFHIWKTATADVK*
Ga0137313_10639902	3300011403	Soil	AAHANRFSVVFYGYHESILAKNLPVFLKVRAEERERLINRLRRSSELPDRETAVETSPQFGIASIALSHAVTDVANVWFLIWSSANGDVK*
Ga0137314_11226492	3300011420	Soil	NLAEFLKIRRDESQRLLQRLRRSSELPDRIEGVENSPQFGIASIAFSHAVTDVANVWYHIWKSSNGDLGN*
Ga0137452_11386212	3300011441	Soil	YGYHESILARNLPAFLKVRAEERERLINRLRRSSELPDRETAVETSPQFGIASIALSHAVTDVANVWFLIWSSANGDVK*
Ga0137421_12029282	3300012039	Soil	DSLVAAHANRFSVVFYGYHESILAKNLPVFLKVRAEERERLINRLRRSSELPDRETAVETSPQFGIASIALSHAVTDVANVWFLIWSSANGDVK*
Ga0137319_10617982	3300012167	Soil	AGCAVASMNDPQLDTLVAAQSARFAVVFYGYHSTIQSGNLAEFLKIRRDESQRLLQRLRRSSELPDRIEGVENSPQFGIASIAFSHAVTDVANVWYHIWKSSNGDLGN*
Ga0150985_1023302812	3300012212	Avena Fatua Rhizosphere	MRDTACAVAALNDPQLDSLVSIQANNFAVVFYGYHDLIRAGNLEGFLKARAEERDHLFNRLRRSSELPDRFSAIELSPQFGIASIAFSHAVTDVANV
Ga0134056_12743592	3300012397	Grasslands Soil	LAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0134059_12774022	3300012402	Grasslands Soil	YHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNNVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0137396_102845272	3300012918	Vadose Zone Soil	YGYHPLIRTGDLAGFLNARREEREHLFNRLRRSSELPDLNSVIETSPKFGIASIAYSHAVTDVANVWFHIWKAVNGDLN*
Ga0137394_101663012	3300012922	Vadose Zone Soil	NDPQLDSLVAGQAEKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH*
Ga0126369_123157002	3300012971	Tropical Forest Soil	PQLDSLIAAQSNKFVVVFYGYHDLIRSGDLASFLKVRTEERERLFRRLRRSSELPNRNDVVENSPEFGIASIALSHAATDVANVWFYIWKTANGDLK*
Ga0134077_101612312	3300012972	Grasslands Soil	VFYGYHELITNGDLTGFLNARRDERERLFKRLRRFSELPDRTDVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0134081_101113421	3300014150	Grasslands Soil	LAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0134075_103290801	3300014154	Grasslands Soil	AGCAVAVLNDPQLDSLVGAQADKFTVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLH*
Ga0134073_102018631	3300015356	Grasslands Soil	QLDSLVAAQAGKFTVVFYGYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0134089_102210582	3300015358	Grasslands Soil	DAGCAAATLNDPQLDSLVAAQMTKFAVVFYGYHELITNGDLTGFLNARRDERERLFKRLRRFSELPDRTDVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0132258_115365362	3300015371	Arabidopsis Rhizosphere	ASKFAAVFYGYHELIRTGDLPGYLNVRREERERLFSRLRRSAELPDRDSAIERSSQFGIASIAYSHAVTDVANIWFHIWKTANGDLN*
Ga0132258_136986271	3300015371	Arabidopsis Rhizosphere	DAGCAVAEMSDPRLDTLVSANSSKFAIVFYGYHPTIQAGNLTEFVKIRKDESERLLRRLRRSSELPDRYKEVETSPDFGIASIAFSHAVTDVANVWYYIWKSVNGDLREY*
Ga0132255_1019924441	3300015374	Arabidopsis Rhizosphere	FALVFYGYDEQIRAGNLANFLKTRADERQRLFTRLRRSSELPDRNTAVETSPQYGIAAIALSHAVTDVANVWFHIWRTANGEVK*
Ga0132255_1025112061	3300015374	Arabidopsis Rhizosphere	IRKGDLNGFLRVRSDESQRLLNRLHRSSELPERTTAIELSPQYGIASIAFSHAVTDVANVWFHIWKAVNGDLR*
Ga0132255_1035228901	3300015374	Arabidopsis Rhizosphere	FVAGQLDRFAVVFYGYHDLIQAGNLSAFIKTRNEERIRLNDRLQRSSELPNRSDDVETSPQFGIASIALSHAATDVANVWFYIWKTATGDVK*
Ga0182032_119853912	3300016357	Soil	RDAGCATAALNDPQLGYLVAAQSGKFAVVFYGYHELIRTGDFSGFLKVRLEACERLFSRLRRSAELPDRDTAIEKSPQFGIASIAYSHAVTDVANVWFHIWKTANGDLQ
Ga0182040_109802962	3300016387	Soil	HLDSLVAAQANKFAIVFYGYHDLIRAGNLNGFLTTRAEERERLFARLRRSSELPDRSDAVETSPNFGIASIAISHAVTDVTNIWFHIWSSANGDLK
Ga0182039_102370362	3300016422	Soil	DAAMRDAGCAAAALNDPQLDSLVATQAGNFSVVFYGYHDLIRSGDLPGFLNSRREEREHLFNRLRRSSELPDRNNVIETSPQYGIASIAYSHAVTDVANVWFHIWKEVNGDLK
Ga0134112_103814942	3300017656	Grasslands Soil	AVAAIRDAGCAAAALDDPELDPLVAANNGRFQVVFYGYHDRIQSGDLNGFLSVRAEERKRLFDRLRRSSELPDRFDAVETSPQFGIASIAFSHAVTDVVNVWFHIWKQSNGDLQ
Ga0184640_103684221	3300018074	Groundwater Sediment	VVFYGYHDLIQKGDLPGFLKIRAEESQRLLNRLNRSSELPDLTTAIETSPQYGIASIAFSHAVTDVANVWFHIWKTVNGDQR
Ga0210408_113243112	3300021178	Soil	YGYHDLIRAGNLDGFLKTRADEREHLFNRLRRSSELPDRFTTVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK
Ga0193719_102466191	3300021344	Soil	AALNDPKLDSLVSAQASKFSVVFYGYHDLILAGDLTGFLKVRSEERDRLFSRLRRSSELPDRYDAIETSPQFGIASIAFSHAVTDVANVWFHIWKQVNGDLK
Ga0222622_111437091	3300022756	Groundwater Sediment	DLSGFLKVRSEESRRLLARLQRSSDLPDRTNAIETSPKYGIASIAFSHAVTDVANVWFHIWKTVNGDLR
Ga0247784_10300941	3300023270	Plant Litter	FVVVFYGYHDRILAGDLAGFLRARSQERELLNRRLNRSSQLPDRTTAVETSPNFGIASIAFSHAATDVVNVWFHIWKESHGDLR
Ga0207700_118635241	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRDAACAVATLNDPKLDALVAAQANNFAVVFYGYHDLIRAGNLDGFLKTRADEREHLFNRLRRSSELPDRFTTVELSPQFGIASIAFSHAVTDV
Ga0207701_105078071	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EVVFYGFHDLIRAGRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR
Ga0207690_110221832	3300025932	Corn Rhizosphere	LDTLVSAQSSKFAVVFYGYHPTIQAGNLTEFVKVRKEESERLLRRLRRSSELPDRFSEIETSPQFGIASIAFSHAVTDVANVWYYIWKSVNGDLKE
Ga0207686_103406741	3300025934	Miscanthus Rhizosphere	SVSVAAIRDAGCAAAALNDPQLDALVSTQANKFEVVFYGYHDLIHAGDLAGFLRTRAEERDRLFGRLRRSSELPDRYNALETSSQFGIAAIAFSHAVTDVANVWLHIWKIANGDLK
Ga0207689_104730581	3300025942	Miscanthus Rhizosphere	RLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR
Ga0209350_10850931	3300026277	Grasslands Soil	VAAEAAKFAVVFYGYHQLITDGDLAGFLNARREERERLFTRLRRSSELPDRNNVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK
Ga0209235_10841213	3300026296	Grasslands Soil	LNDPQLDSLVGAQADKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH
Ga0209468_11414942	3300026306	Soil	GKFTVVFYGYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK
Ga0209472_12604702	3300026323	Soil	YGYHDLIRTGDLSGFLNARSTERERLFNRLRRSSELPNRNNVIETSPQFGIAAIAYSHAVTDVANVWFHIWKAVNGDLR
Ga0209376_10852722	3300026540	Soil	AVATLNDPQLDSLVAAEAAKFAVVFYGYHQLITDGDLAGFLNARREERERLFTRLRRSSELPDRNNVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK
Ga0207428_104160002	3300027907	Populus Rhizosphere	LVAGQVNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK
Ga0207428_110017652	3300027907	Populus Rhizosphere	ALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK
Ga0209382_110490882	3300027909	Populus Rhizosphere	VAAQVNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK
Ga0310813_103599411	3300031716	Soil	YGYHDQIRAGNLTGFLTTRADERERLFARLRRSAELPDRTDAVETSSQFGIASIALSHAVTDVSNIWFHIWKSANGDQQ
Ga0310813_115429901	3300031716	Soil	AQLSDPQIDSFVAAQANKFEVVFYGFHDLIRAGRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR
Ga0307469_110054482	3300031720	Hardwood Forest Soil	VVFYGYHERITNGDLAGFLTTRREERDRLFTRLRRSSELPDRNSEIEMSPQFGIASIAYSHAVTDVANIWFHIWKTANGDLN
Ga0307469_125421331	3300031720	Hardwood Forest Soil	DPQLDGLVAAQASKFAVVFYGYHDSIRNGDLTGFLNVRREERERLLRRLRRSAELPDRDNKVETSSQFGIASIAYSHAVTDVANIWFHIWKTVNGDLK
Ga0310917_106193012	3300031833	Soil	VGCAVAALNDPQLDALVTAQSKNFAVVFYGYHDLIQAGDLDGFLKARAVEREHLFNRLRRSSELPDKTTAVELSPQFGIASIAFSHAVTDVANVWYHIWKTVNGDLK
Ga0310909_113453791	3300031947	Soil	GCAVALLNDPQMDAFVTAQSKNFAVVFYGYHDLIQAGNLDGFLKARAAEREHLFNRLRRSSELPDKTTAVELSPQFGIASIAFSHAVTDVANVWYHIWKTANGDLR
Ga0307472_1013550902	3300032205	Hardwood Forest Soil	SVAAIRDAGCAAAELNDPQLDSLVAAQAEKFTVVFYGYHELITNGDLAGFLTVRREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK
Ga0306920_1029228921	3300032261	Soil	VLNDPQLDSLVSAQAKNFAVVFYGYHDLIRAGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAIELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK
Ga0310812_101169901	3300032421	Soil	FYGYHDQIRAGNLTGFLTTRADERERLFARLRRSAELPDRTDAVETSSQFGIASIALSHAVTDVSNIWFHIWKSANGDQQ
Ga0364929_0346876_3_266	3300034149	Sediment	AANFAVVFYGYHDLIRKGDLSGFLKVRSEESRRLLARLQRSSDLPDRTNAIETSPKYGIASIAFSHAVTDVANVWFHIWKTVNGDLR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072190

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences