NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072190

Metagenome / Metatranscriptome Family F072190

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072190
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 94 residues
Representative Sequence FAVVFYGYHDLIRSGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK
Number of Associated Samples 105
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.50 %
% of genes near scaffold ends (potentially truncated) 32.23 %
% of genes from short scaffolds (< 2000 bps) 29.75 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.942 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(16.529 % of family members)
Environment Ontology (ENVO) Unclassified
(23.140 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.587 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.
1GPICC_00218360
2FW301_10131962
3INPhiseqgaiiFebDRAFT_1016584481
4INPhiseqgaiiFebDRAFT_1050307251
5F14TC_1008759891
6JGI1027J11758_117163531
7JGI1027J12803_1006570381
8Ga0055489_101897962
9Ga0063356_1032093252
10Ga0066395_102984411
11Ga0062591_1029440832
12Ga0066685_109249072
13Ga0066676_102886451
14Ga0066675_109256321
15Ga0070690_1010799552
16Ga0066388_1015491071
17Ga0066388_1015495541
18Ga0066388_1085822651
19Ga0070677_107831061
20Ga0068869_1010841901
21Ga0070689_1005479811
22Ga0070673_1009619232
23Ga0070705_1015799002
24Ga0068867_1006164551
25Ga0066701_109271372
26Ga0066705_103134121
27Ga0066691_102679402
28Ga0066706_113402991
29Ga0066706_114457672
30Ga0068859_1019390232
31Ga0066903_1005806952
32Ga0068862_1020222641
33Ga0066651_106566851
34Ga0066656_101650192
35Ga0075417_106996352
36Ga0066658_100485552
37Ga0066659_108829242
38Ga0079220_106691582
39Ga0075428_1004600332
40Ga0075421_1002165921
41Ga0075421_1013002762
42Ga0075431_1003164312
43Ga0075433_110048332
44Ga0075420_1007500911
45Ga0075434_1000292251
46Ga0075429_1000347171
47Ga0075419_108903252
48Ga0075435_1014626921
49Ga0066710_1004741082
50Ga0105245_112252182
51Ga0075418_100883253
52Ga0075418_105568252
53Ga0114129_106989501
54Ga0105242_128526371
55Ga0126380_108986372
56Ga0126380_119159941
57Ga0126382_105128631
58Ga0134084_100910471
59Ga0126376_107739312
60Ga0126376_123786311
61Ga0126372_116912222
62Ga0126379_111137251
63Ga0126381_1019390201
64Ga0126383_115195942
65Ga0126383_129659662
66Ga0126383_131673811
67Ga0134122_111270432
68Ga0134121_118984881
69Ga0137313_10639902
70Ga0137314_11226492
71Ga0137452_11386212
72Ga0137421_12029282
73Ga0137319_10617982
74Ga0150985_1023302812
75Ga0134056_12743592
76Ga0134059_12774022
77Ga0137396_102845272
78Ga0137394_101663012
79Ga0126369_123157002
80Ga0134077_101612312
81Ga0134081_101113421
82Ga0134075_103290801
83Ga0134073_102018631
84Ga0134089_102210582
85Ga0132258_115365362
86Ga0132258_136986271
87Ga0132255_1019924441
88Ga0132255_1025112061
89Ga0132255_1035228901
90Ga0182032_119853912
91Ga0182040_109802962
92Ga0182039_102370362
93Ga0134112_103814942
94Ga0184640_103684221
95Ga0210408_113243112
96Ga0193719_102466191
97Ga0222622_111437091
98Ga0247784_10300941
99Ga0207700_118635241
100Ga0207701_105078071
101Ga0207690_110221832
102Ga0207686_103406741
103Ga0207689_104730581
104Ga0209350_10850931
105Ga0209235_10841213
106Ga0209468_11414942
107Ga0209472_12604702
108Ga0209376_10852722
109Ga0207428_104160002
110Ga0207428_110017652
111Ga0209382_110490882
112Ga0310813_103599411
113Ga0310813_115429901
114Ga0307469_110054482
115Ga0307469_125421331
116Ga0310917_106193012
117Ga0310909_113453791
118Ga0307472_1013550902
119Ga0306920_1029228921
120Ga0310812_101169901
121Ga0364929_0346876_3_266
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.68%    β-sheet: 0.00%    Coil/Unstructured: 47.32%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080FAVVFYGYHDLIRSGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLKSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
33.1%66.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater
Natural And Restored Wetlands
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Plant Litter
Sediment
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
4.1%3.3%9.9%7.4%16.5%3.3%4.1%4.1%14.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICC_002183602067725002SoilCAAAAMSDPKLDSFIASQANSFAVVFYGYHELIRKATSTDFLKVRSEESRRLLVRLQRSSELPNRTTAIETSPQYGIASIAFSHAVTDVANVWFHIWKTVNGDLR
FW301_101319623300000178GroundwaterREGNLPGFLRVRADERERLLNRLRRSSELPDKTPAIEMSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLR*
INPhiseqgaiiFebDRAFT_10165844813300000364SoilYGHHDLIRMGDLAGFLKVRSAEREQLFRRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
INPhiseqgaiiFebDRAFT_10503072513300000364SoilAIRDAGCAVAAMSDPKLDPLIASQAKNFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLNRSSELPDRTNAIEVSPQYGIASIAFSHAVTDVANVWFHIWKAVNGDLR*
F14TC_10087598913300000559SoilHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFYIWKAADGDIK*
JGI1027J11758_1171635313300000789SoilAAAAMSDPRLDSLIGSQANKFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLNRSSELPDRTNAIEVSPQYGIASIAFSHAVTDVANVWFHIWKAVNGDLR*
JGI1027J12803_10065703813300000955SoilNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK*
Ga0055489_1018979623300004145Natural And Restored WetlandsPDLDSIAASNASKFVVVFYGFHPEIEKGDLAAYLRTRTEEHERLLRRLRRSSELPDRLESIENSPQFGIAAIAFSHAVTDVANVWLHIWKSVNGASN*
Ga0063356_10320932523300004463Arabidopsis Thaliana RhizosphereLIRARNLSGFLAARNEERRRLSARFQRSAELPDRNDVVETSPRFGIASVAYSHAVTDVTNVWYLIWQTANGDSK*
Ga0066395_1029844113300004633Tropical Forest SoilVAALNDPNLDSLVDANAAKFSVVFYGYHERILAGDLAGFLQIRTQERQQLLRRLNRSSELPDRNSNVETSPNYGIASIAFSHAATDVVNVWFHIWKESHGDLQ*
Ga0062591_10294408323300004643SoilAAMSDPRLDPLIASQADKFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLNRSSELPDRTTAIETSPQYGIASIAFSHAVTDVANVWFHIWKTVNGDLR*
Ga0066685_1092490723300005180SoilGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH*
Ga0066676_1028864513300005186SoilAALNDPRLDSVVSSQVNAFAVVFYGYHDLIRDGDLAGFLRVRAEERERLFRRLRRSSELPDRTNEIELSPQFGIASIAFSHAVTDVANIWFHIWRTVNGDLR*
Ga0066675_1092563213300005187SoilGDLAGFLNARREEREHLFNRLRRSSELPDLNSVIETSPRFGIASIAYSHAVTDVANVWFHIWKAVNGDLN*
Ga0070690_10107995523300005330Switchgrass RhizosphereYDEQIRAGNLANFLKTRADERQRLFTRLRRSSELPDRNTAVETSPQYGIAAIALSHAVTDVANVWFHIWRTANGEVK*
Ga0066388_10154910713300005332Tropical Forest SoilAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0066388_10154955413300005332Tropical Forest SoilASIAAMRDAACAVAMLNDPQLDSLVSAQAKNFAVVFYGYHDLIRAGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0066388_10858226513300005332Tropical Forest SoilRGADLSAAVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRQGDLTGFLKVRSAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLAFSHAVTDVANVWVYIWKAANTNPK*
Ga0070677_1078310613300005333Miscanthus RhizosphereNMDALVNTNAPKFEVVFYGYHDRILAGDLAGFLRIRAQERDQLRRRLNRSSELPNRNNTVETSPDFGIASIAFSHAATDVVNVWFHIWKQSRGDLR*
Ga0068869_10108419013300005334Miscanthus RhizosphereEVVFYGYHDLIQAGNLSDFLKSRSEERERLFSRLRRSSELPDRSDSIETSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0070689_10054798113300005340Switchgrass RhizosphereIRDAGCAAAVLNDPQLDSLIAAQVNNFTLVFYGYDEQIRAGNLANFLKTRADERQRLFTRLRRSSELPDRNTAVETSPQYGIAAIALSHAVTDVANVWFHIWRTANGEVK*
Ga0070673_10096192323300005364Switchgrass RhizosphereGFDERIVKGDLKGFLKARTEESERLLQRLRRYSELPDKTTAIETSPQYGIASIAFSHAVTDVANVWYHIWKQAQGDLRQE*
Ga0070705_10157990023300005440Corn, Switchgrass And Miscanthus RhizosphereASIRDAGCAVAALNDPQLDSLVAAQANKFAVVFYGYHDSIRAGNLPAFLKVRSEERERLFRRLHRSSELPDRNDVVETSSQFGIASIAISHAVTDVANIWFHIWNTANKR*
Ga0068867_10061645513300005459Miscanthus RhizosphereANRFAVVFYGYHDLIQTGNLGDFLKTRAEERERLFARLRRSSELPDRSDSIETSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0066701_1092713723300005552SoilSLVAGQAEKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH*
Ga0066705_1031341213300005569SoilLTARREERDRLFTRLRRSSELPDRNNVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0066691_1026794023300005586SoilFAVVFYGYHQLITDGDLAGFLNARREERERLFTRLRRSSELPDRNNVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0066706_1134029913300005598SoilAAAALNDPQLDSLVAAQAEKFTVVFYGYHELITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0066706_1144576723300005598SoilASVAAIRDAACAAAALNDPKLDSLVSAQASKFSVVFYGYHDLILAGDLTGFLKVRSEERDRLFSRLRRSSELPDRYDAIETSPQFGIASIAFSHAVTDVANIWFHIWKQVNGDLK*
Ga0068859_10193902323300005617Switchgrass RhizosphereDSLIASQADNFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLDRLQRSSNLPDRTNAIETSPKYGIASIAFSHAVTDVANVWFHIWKTVNGDLR*
Ga0066903_10058069523300005764Tropical Forest SoilAALNDPQLDSFVAAQSSKFEVVFYGHHDLIRAGDLAGFLKARAAERERLFSRLRRSSELPNRNDTVENSPQFGIASIALSHAVTDVANVWSYIWKATNADLK*
Ga0068862_10202226413300005844Switchgrass RhizosphereLSDPQIDSFVAAQANKFEVVFYGFHDLIRAGRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR*
Ga0066651_1065668513300006031SoilLITNGDLAGFLTARREERDRLFTRLRRSSELPDRSSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0066656_1016501923300006034SoilYHDLIRAGNFAGFLKARAEERERLFSRLKRSSELPNRNDAVETSPQFGIASIALSHAATDVANVWFHIWKSANGDLR*
Ga0075417_1069963523300006049Populus RhizosphereALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0066658_1004855523300006794SoilAGCATAALNDPQLDSLVAAQAGKFSVVFYGYHQLIRTGDLAGFLNARQEEREHLFNRLRRSSELPDLNSVIETSPQFGIASIAYSHAVTDVANVWFHIWKAVNGDLN*
Ga0066659_1088292423300006797SoilAAMRDAGCAAAALNDPQLDSLVATQSGKFSVVFYGYHDLIRTGDLPGFLNTRSTERERLFNRLRRSSELPNRNNVIETSPQFGIAAIAYSHAVTDVANVWFHIWKAVNGDLR*
Ga0079220_1066915823300006806Agricultural SoilSKFAAVFYGYHELIRTGDLPGYLNVRREERERLLSRLRRSAELPDRDSAIERSSQFGIASIAYSHAVTDVANIWFHIWKTANGDLN*
Ga0075428_10046003323300006844Populus RhizosphereNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075421_10021659213300006845Populus RhizosphereVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075421_10130027623300006845Populus RhizosphereAALNDPHLDSLVAAQVNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK*
Ga0075431_10031643123300006847Populus RhizosphereHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075433_1100483323300006852Populus RhizosphereGDLSAAVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075420_10075009113300006853Populus RhizosphereAMRDAGCAIAEMSDPRLDSLVSAQSSRFAVVFYGYHPTIQAGNLAEFVKVRKEESERLLRRLRRSSELPDRYTDVETSPQFGIASIAFSHAVTDVANVWYYIWKSVNGDLKE*
Ga0075434_10002922513300006871Populus RhizosphereAGCAAAALNDPQLDSLVATQSGNFSVVFYGYHDLIRTGDLPGFLNARSTERERLFNRLRRSSELPNRNNVIETSPQFGIAAIAYSHAVTDVANVWFHIWKAVNGDLR*
Ga0075429_10003471713300006880Populus RhizosphereQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075419_1089032523300006969Populus RhizosphereDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFRRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075435_10146269213300007076Populus RhizosphereGFLTTRAEERERLLARLRRSSELPDRTDAVETSPNFGIASIAISHAVTDVTNIWFHIWSSANGDLK*
Ga0066710_10047410823300009012Grasslands SoilMAASVTAIRDAGCAVAVLNDPQLDSLVGAQADKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH
Ga0105245_1122521823300009098Miscanthus RhizosphereSLVASQASAFAVVFYGYHDLIQSGDLPGFLKVRSEERERLFSRLRRSSELPDRDNKVETSPKFGIASIAFSHAVTDVANVWFHIWKTAGGGSQ*
Ga0075418_1008832533300009100Populus RhizosphereAVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGPVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0075418_1055682523300009100Populus RhizosphereAVAAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0114129_1069895013300009147Populus RhizosphereAVRDAGCAVAALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0105242_1285263713300009176Miscanthus RhizosphereVSVAAIRDAGCAAAALNDPQLDALVSTQANKFEVVFYGYHDLIHAGDLAGFLRTRAEERDRLFGRLRRSSELPDRYNALETSSQFGIAAIAFSHAVTDVANVWLHIWKIANGDLK*
Ga0126380_1089863723300010043Tropical Forest SoilAGDLAGFLKVRNAERERLFSRLRRSSELPDRNDTVENSPQFGIASIALSHAVTDVANVWTYIWKTTNTGTK*
Ga0126380_1191599413300010043Tropical Forest SoilSQADNFAVVFYGYHDLIRKGDLNGFLKVRSEESRRLLNRLHRSSELPDRTNAIEISPQYGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126382_1051286313300010047Tropical Forest SoilNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRSAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLAFSHAVTDVANVWVYIWKAANTNPK*
Ga0134084_1009104713300010322Grasslands SoilGCAAAALNDPQLDSLVAAQAGKFTVVFYGYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0126376_1077393123300010359Tropical Forest SoilLVAAQSNKFAVVFYGHHDLIRMGDLAGFLKVRSEEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANSNPK*
Ga0126376_1237863113300010359Tropical Forest SoilARNFAVVFYGYHDLIRAGNLDGFLKARAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126372_1169122223300010360Tropical Forest SoilAVAKLNDPQLDGLVAAQAGKFAVVFYGYHDLIRSGDLAGFLKARRDERERLFSRLRRSAELPDRDTAVEKSSQFGIASIAYSHAVTDVANVWFHIWKTVNGDLK*
Ga0126379_1111372513300010366Tropical Forest SoilFAVVFYGYHDLIRSGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126381_10193902013300010376Tropical Forest SoilAVAAVRDAGCAVAALNDPQLDSLVAAQSNKFAVVFYGHHDLIRMGDLAGFLKVRSEEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK*
Ga0126383_1151959423300010398Tropical Forest SoilANNFAVVFYGYHDLIRAGNLDGFLKTRADEREHLFNRLRRSSELPDRFSAVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK*
Ga0126383_1296596623300010398Tropical Forest SoilAQSSKFEVVFYGHHDLIRAGDLAGFLKARAAERERLFSRLRRSSELPNRNDTVENSPQFGIASIALSHAVTDVANVWSYIWKATNADLK*
Ga0126383_1316738113300010398Tropical Forest SoilGLVAAQAAKFAVVFYGYHDLIRNGDLAGFLKIRREERERLFSRLRRSAELPDRDDAIEKSSQFGIASIAYSHAVTDVANVWFHIWKTANGDLR*
Ga0134122_1112704323300010400Terrestrial SoilSLIATQANNYAVVFYGYHDLIRKGDLNGFLRIRSDESRRLLNRLHRSSELPERTTAIELSPQYGIASIAFSHAVTDVTNVWFHIWKTVNGDLR*
Ga0134121_1189848813300010401Terrestrial SoilKKGDLNGFLKVRSEESRRLFDRLQRSSDLPDRTTAIETSPKYGIASIAFSHAVTDVANVWFHIWKTATADVK*
Ga0137313_106399023300011403SoilAAHANRFSVVFYGYHESILAKNLPVFLKVRAEERERLINRLRRSSELPDRETAVETSPQFGIASIALSHAVTDVANVWFLIWSSANGDVK*
Ga0137314_112264923300011420SoilNLAEFLKIRRDESQRLLQRLRRSSELPDRIEGVENSPQFGIASIAFSHAVTDVANVWYHIWKSSNGDLGN*
Ga0137452_113862123300011441SoilYGYHESILARNLPAFLKVRAEERERLINRLRRSSELPDRETAVETSPQFGIASIALSHAVTDVANVWFLIWSSANGDVK*
Ga0137421_120292823300012039SoilDSLVAAHANRFSVVFYGYHESILAKNLPVFLKVRAEERERLINRLRRSSELPDRETAVETSPQFGIASIALSHAVTDVANVWFLIWSSANGDVK*
Ga0137319_106179823300012167SoilAGCAVASMNDPQLDTLVAAQSARFAVVFYGYHSTIQSGNLAEFLKIRRDESQRLLQRLRRSSELPDRIEGVENSPQFGIASIAFSHAVTDVANVWYHIWKSSNGDLGN*
Ga0150985_10233028123300012212Avena Fatua RhizosphereMRDTACAVAALNDPQLDSLVSIQANNFAVVFYGYHDLIRAGNLEGFLKARAEERDHLFNRLRRSSELPDRFSAIELSPQFGIASIAFSHAVTDVANV
Ga0134056_127435923300012397Grasslands SoilLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0134059_127740223300012402Grasslands SoilYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNNVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0137396_1028452723300012918Vadose Zone SoilYGYHPLIRTGDLAGFLNARREEREHLFNRLRRSSELPDLNSVIETSPKFGIASIAYSHAVTDVANVWFHIWKAVNGDLN*
Ga0137394_1016630123300012922Vadose Zone SoilNDPQLDSLVAGQAEKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH*
Ga0126369_1231570023300012971Tropical Forest SoilPQLDSLIAAQSNKFVVVFYGYHDLIRSGDLASFLKVRTEERERLFRRLRRSSELPNRNDVVENSPEFGIASIALSHAATDVANVWFYIWKTANGDLK*
Ga0134077_1016123123300012972Grasslands SoilVFYGYHELITNGDLTGFLNARRDERERLFKRLRRFSELPDRTDVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0134081_1011134213300014150Grasslands SoilLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0134075_1032908013300014154Grasslands SoilAGCAVAVLNDPQLDSLVGAQADKFTVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLH*
Ga0134073_1020186313300015356Grasslands SoilQLDSLVAAQAGKFTVVFYGYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK*
Ga0134089_1022105823300015358Grasslands SoilDAGCAAATLNDPQLDSLVAAQMTKFAVVFYGYHELITNGDLTGFLNARRDERERLFKRLRRFSELPDRTDVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK*
Ga0132258_1153653623300015371Arabidopsis RhizosphereASKFAAVFYGYHELIRTGDLPGYLNVRREERERLFSRLRRSAELPDRDSAIERSSQFGIASIAYSHAVTDVANIWFHIWKTANGDLN*
Ga0132258_1369862713300015371Arabidopsis RhizosphereDAGCAVAEMSDPRLDTLVSANSSKFAIVFYGYHPTIQAGNLTEFVKIRKDESERLLRRLRRSSELPDRYKEVETSPDFGIASIAFSHAVTDVANVWYYIWKSVNGDLREY*
Ga0132255_10199244413300015374Arabidopsis RhizosphereFALVFYGYDEQIRAGNLANFLKTRADERQRLFTRLRRSSELPDRNTAVETSPQYGIAAIALSHAVTDVANVWFHIWRTANGEVK*
Ga0132255_10251120613300015374Arabidopsis RhizosphereIRKGDLNGFLRVRSDESQRLLNRLHRSSELPERTTAIELSPQYGIASIAFSHAVTDVANVWFHIWKAVNGDLR*
Ga0132255_10352289013300015374Arabidopsis RhizosphereFVAGQLDRFAVVFYGYHDLIQAGNLSAFIKTRNEERIRLNDRLQRSSELPNRSDDVETSPQFGIASIALSHAATDVANVWFYIWKTATGDVK*
Ga0182032_1198539123300016357SoilRDAGCATAALNDPQLGYLVAAQSGKFAVVFYGYHELIRTGDFSGFLKVRLEACERLFSRLRRSAELPDRDTAIEKSPQFGIASIAYSHAVTDVANVWFHIWKTANGDLQ
Ga0182040_1098029623300016387SoilHLDSLVAAQANKFAIVFYGYHDLIRAGNLNGFLTTRAEERERLFARLRRSSELPDRSDAVETSPNFGIASIAISHAVTDVTNIWFHIWSSANGDLK
Ga0182039_1023703623300016422SoilDAAMRDAGCAAAALNDPQLDSLVATQAGNFSVVFYGYHDLIRSGDLPGFLNSRREEREHLFNRLRRSSELPDRNNVIETSPQYGIASIAYSHAVTDVANVWFHIWKEVNGDLK
Ga0134112_1038149423300017656Grasslands SoilAVAAIRDAGCAAAALDDPELDPLVAANNGRFQVVFYGYHDRIQSGDLNGFLSVRAEERKRLFDRLRRSSELPDRFDAVETSPQFGIASIAFSHAVTDVVNVWFHIWKQSNGDLQ
Ga0184640_1036842213300018074Groundwater SedimentVVFYGYHDLIQKGDLPGFLKIRAEESQRLLNRLNRSSELPDLTTAIETSPQYGIASIAFSHAVTDVANVWFHIWKTVNGDQR
Ga0210408_1132431123300021178SoilYGYHDLIRAGNLDGFLKTRADEREHLFNRLRRSSELPDRFTTVELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK
Ga0193719_1024661913300021344SoilAALNDPKLDSLVSAQASKFSVVFYGYHDLILAGDLTGFLKVRSEERDRLFSRLRRSSELPDRYDAIETSPQFGIASIAFSHAVTDVANVWFHIWKQVNGDLK
Ga0222622_1114370913300022756Groundwater SedimentDLSGFLKVRSEESRRLLARLQRSSDLPDRTNAIETSPKYGIASIAFSHAVTDVANVWFHIWKTVNGDLR
Ga0247784_103009413300023270Plant LitterFVVVFYGYHDRILAGDLAGFLRARSQERELLNRRLNRSSQLPDRTTAVETSPNFGIASIAFSHAATDVVNVWFHIWKESHGDLR
Ga0207700_1186352413300025928Corn, Switchgrass And Miscanthus RhizosphereMRDAACAVATLNDPKLDALVAAQANNFAVVFYGYHDLIRAGNLDGFLKTRADEREHLFNRLRRSSELPDRFTTVELSPQFGIASIAFSHAVTDV
Ga0207701_1050780713300025930Corn, Switchgrass And Miscanthus RhizosphereEVVFYGFHDLIRAGRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR
Ga0207690_1102218323300025932Corn RhizosphereLDTLVSAQSSKFAVVFYGYHPTIQAGNLTEFVKVRKEESERLLRRLRRSSELPDRFSEIETSPQFGIASIAFSHAVTDVANVWYYIWKSVNGDLKE
Ga0207686_1034067413300025934Miscanthus RhizosphereSVSVAAIRDAGCAAAALNDPQLDALVSTQANKFEVVFYGYHDLIHAGDLAGFLRTRAEERDRLFGRLRRSSELPDRYNALETSSQFGIAAIAFSHAVTDVANVWLHIWKIANGDLK
Ga0207689_1047305813300025942Miscanthus RhizosphereRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR
Ga0209350_108509313300026277Grasslands SoilVAAEAAKFAVVFYGYHQLITDGDLAGFLNARREERERLFTRLRRSSELPDRNNVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK
Ga0209235_108412133300026296Grasslands SoilLNDPQLDSLVGAQADKFAVVFYGYHDLILTGNLAGFLNLRAEERERLMKRLRRSSELPDRTNVIENSPQFGIASIAFSHAVTDVANVWLHIWKTVNGDLH
Ga0209468_114149423300026306SoilGKFTVVFYGYHERITNGDLAGFLTARREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK
Ga0209472_126047023300026323SoilYGYHDLIRTGDLSGFLNARSTERERLFNRLRRSSELPNRNNVIETSPQFGIAAIAYSHAVTDVANVWFHIWKAVNGDLR
Ga0209376_108527223300026540SoilAVATLNDPQLDSLVAAEAAKFAVVFYGYHQLITDGDLAGFLNARREERERLFTRLRRSSELPDRNNVIETSSQFGIASIAYSHAVTDVANVWYLIWKTVNGDLK
Ga0207428_1041600023300027907Populus RhizosphereLVAGQVNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK
Ga0207428_1100176523300027907Populus RhizosphereALNDPQLDSLVAAQSSKFEVVFYGHHDLIRMGDLAGFLKVRGAEREQLFKRLRRSSELPDRGGAVENSPQFGIASLALSHAVTDVANVWVYIWKAANTNPK
Ga0209382_1104908823300027909Populus RhizosphereVAAQVNRFEVVFYGYHDMIRAGDLPGFLNVRSEERDRLFRRLRRSSELPDLYQAIETSPVFGIASIAFSHAVTDVANVWFHIWKAADGDIK
Ga0310813_1035994113300031716SoilYGYHDQIRAGNLTGFLTTRADERERLFARLRRSAELPDRTDAVETSSQFGIASIALSHAVTDVSNIWFHIWKSANGDQQ
Ga0310813_1154299013300031716SoilAQLSDPQIDSFVAAQANKFEVVFYGFHDLIRAGRLDAFIKTRTEESTRLLNRLRRSSELPDRSNVVETSPQFGIAAIALSHAVTDVANVWFHIWKTANGDLR
Ga0307469_1100544823300031720Hardwood Forest SoilVVFYGYHERITNGDLAGFLTTRREERDRLFTRLRRSSELPDRNSEIEMSPQFGIASIAYSHAVTDVANIWFHIWKTANGDLN
Ga0307469_1254213313300031720Hardwood Forest SoilDPQLDGLVAAQASKFAVVFYGYHDSIRNGDLTGFLNVRREERERLLRRLRRSAELPDRDNKVETSSQFGIASIAYSHAVTDVANIWFHIWKTVNGDLK
Ga0310917_1061930123300031833SoilVGCAVAALNDPQLDALVTAQSKNFAVVFYGYHDLIQAGDLDGFLKARAVEREHLFNRLRRSSELPDKTTAVELSPQFGIASIAFSHAVTDVANVWYHIWKTVNGDLK
Ga0310909_1134537913300031947SoilGCAVALLNDPQMDAFVTAQSKNFAVVFYGYHDLIQAGNLDGFLKARAAEREHLFNRLRRSSELPDKTTAVELSPQFGIASIAFSHAVTDVANVWYHIWKTANGDLR
Ga0307472_10135509023300032205Hardwood Forest SoilSVAAIRDAGCAAAELNDPQLDSLVAAQAEKFTVVFYGYHELITNGDLAGFLTVRREERDRLFTRLRRSSELPDRNSVIEMSPQFGIASIAYSHAVTDVANVWFLIWKTVNGDLK
Ga0306920_10292289213300032261SoilVLNDPQLDSLVSAQAKNFAVVFYGYHDLIRAGNLDGFLKTRAEEREHLFNRLRRSSELPDRFSAIELSPQFGIASIAFSHAVTDVANVWFHIWKTVNGDLK
Ga0310812_1011699013300032421SoilFYGYHDQIRAGNLTGFLTTRADERERLFARLRRSAELPDRTDAVETSSQFGIASIALSHAVTDVSNIWFHIWKSANGDQQ
Ga0364929_0346876_3_2663300034149SedimentAANFAVVFYGYHDLIRKGDLSGFLKVRSEESRRLLARLQRSSDLPDRTNAIETSPKYGIASIAFSHAVTDVANVWFHIWKTVNGDLR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.