NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F072220

Metagenome Family F072220

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072220
Family Type Metagenome
Number of Sequences 121
Average Sequence Length 73 residues
Representative Sequence MTQATAKQRLTALLVERRGRNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG
Number of Associated Samples 96
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.20 %
% of genes near scaffold ends (potentially truncated) 25.62 %
% of genes from short scaffolds (< 2000 bps) 72.73 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.347 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(33.058 % of family members)
Environment Ontology (ENVO) Unclassified
(58.678 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.289 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.00%    β-sheet: 16.00%    Coil/Unstructured: 54.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.4.5.19: Z-DNA binding domaind1sfua_1sfu0.74474
a.4.5.19: Z-DNA binding domaind1qbja_1qbj0.72576
a.4.5.0: automated matchesd3mwma_3mwm0.71276
a.4.5.50: TrmB-liked2d1ha12d1h0.71085
a.4.5.0: automated matchesd2fe3a_2fe30.70982

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF02954HTH_8 21.49
PF01520Amidase_3 14.88
PF14532Sigma54_activ_2 7.44
PF00196GerE 4.96
PF02397Bac_transf 4.13
PF07833Cu_amine_oxidN1 3.31
PF02738MoCoBD_1 2.48
PF01138RNase_PH 1.65
PF03725RNase_PH_C 1.65
PF01725Ham1p_like 0.83
PF13754Big_3_4 0.83
PF01380SIS 0.83
PF13185GAF_2 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0860N-acetylmuramoyl-L-alanine amidaseCell wall/membrane/envelope biogenesis [M] 14.88
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 4.13
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 3.31
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 3.31
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 3.31
COG0127Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase familyNucleotide transport and metabolism [F] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.35 %
UnclassifiedrootN/A1.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10039553All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1628Open in IMG/M
3300002558|JGI25385J37094_10072224All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1097Open in IMG/M
3300002560|JGI25383J37093_10026227All Organisms → cellular organisms → Bacteria1954Open in IMG/M
3300002561|JGI25384J37096_10053113All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300002562|JGI25382J37095_10002663All Organisms → cellular organisms → Bacteria5859Open in IMG/M
3300002908|JGI25382J43887_10022082All Organisms → cellular organisms → Bacteria3396Open in IMG/M
3300002912|JGI25386J43895_10026068All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1722Open in IMG/M
3300005167|Ga0066672_10575779All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium730Open in IMG/M
3300005171|Ga0066677_10013183All Organisms → cellular organisms → Bacteria3652Open in IMG/M
3300005171|Ga0066677_10143157All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300005171|Ga0066677_10156824All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300005174|Ga0066680_10470153All Organisms → cellular organisms → Bacteria → Proteobacteria792Open in IMG/M
3300005175|Ga0066673_10010400All Organisms → cellular organisms → Bacteria3960Open in IMG/M
3300005175|Ga0066673_10149391All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300005176|Ga0066679_10087138All Organisms → cellular organisms → Bacteria1876Open in IMG/M
3300005176|Ga0066679_10134676All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1534Open in IMG/M
3300005176|Ga0066679_10258045All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300005180|Ga0066685_10085528All Organisms → cellular organisms → Bacteria2087Open in IMG/M
3300005184|Ga0066671_10684847All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium664Open in IMG/M
3300005184|Ga0066671_10906293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. UNC305MFCol5.2558Open in IMG/M
3300005186|Ga0066676_10044335All Organisms → cellular organisms → Bacteria → Proteobacteria2498Open in IMG/M
3300005445|Ga0070708_100428385All Organisms → cellular organisms → Bacteria → Proteobacteria1248Open in IMG/M
3300005446|Ga0066686_10052710All Organisms → cellular organisms → Bacteria2489Open in IMG/M
3300005446|Ga0066686_10212810All Organisms → cellular organisms → Bacteria → Proteobacteria1298Open in IMG/M
3300005536|Ga0070697_101429331All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300005549|Ga0070704_101068875All Organisms → cellular organisms → Bacteria → Proteobacteria732Open in IMG/M
3300005554|Ga0066661_10426989All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300005556|Ga0066707_10141331All Organisms → cellular organisms → Bacteria → Proteobacteria1519Open in IMG/M
3300005557|Ga0066704_10082331All Organisms → cellular organisms → Bacteria → Proteobacteria2089Open in IMG/M
3300005558|Ga0066698_11083281All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005559|Ga0066700_10207223All Organisms → cellular organisms → Bacteria → Proteobacteria1357Open in IMG/M
3300005560|Ga0066670_10017821All Organisms → cellular organisms → Bacteria3233Open in IMG/M
3300005560|Ga0066670_10203120All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1190Open in IMG/M
3300005561|Ga0066699_10257421All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300005561|Ga0066699_10290890All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1161Open in IMG/M
3300005568|Ga0066703_10230922All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300005575|Ga0066702_10883600All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005586|Ga0066691_10332556All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300005587|Ga0066654_10236959All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium959Open in IMG/M
3300006032|Ga0066696_10843030All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium584Open in IMG/M
3300006034|Ga0066656_10920048All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300006049|Ga0075417_10177344All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300006755|Ga0079222_10660447All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300006791|Ga0066653_10230820All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300006794|Ga0066658_10256038All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300006796|Ga0066665_10383397All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300006796|Ga0066665_10432763All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300006800|Ga0066660_11149392All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300006853|Ga0075420_101147376All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium668Open in IMG/M
3300007255|Ga0099791_10008634All Organisms → cellular organisms → Bacteria4227Open in IMG/M
3300007258|Ga0099793_10558222All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300007265|Ga0099794_10091521All Organisms → cellular organisms → Bacteria1509Open in IMG/M
3300009012|Ga0066710_100159199All Organisms → cellular organisms → Bacteria3154Open in IMG/M
3300009012|Ga0066710_100797813All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300009137|Ga0066709_102752849All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium654Open in IMG/M
3300009147|Ga0114129_10456618All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1675Open in IMG/M
3300010303|Ga0134082_10202400All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium813Open in IMG/M
3300010320|Ga0134109_10108675All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium971Open in IMG/M
3300010320|Ga0134109_10250731All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300010322|Ga0134084_10441658All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium516Open in IMG/M
3300010335|Ga0134063_10747122All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300010337|Ga0134062_10614218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium561Open in IMG/M
3300012200|Ga0137382_10126227All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1714Open in IMG/M
3300012203|Ga0137399_10561934All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium958Open in IMG/M
3300012203|Ga0137399_10662266All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium878Open in IMG/M
3300012203|Ga0137399_11489986All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012361|Ga0137360_10822474All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium800Open in IMG/M
3300012362|Ga0137361_10574492All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1034Open in IMG/M
3300012582|Ga0137358_10064953All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2444Open in IMG/M
3300012685|Ga0137397_10013732All Organisms → cellular organisms → Bacteria → Proteobacteria5669Open in IMG/M
3300012918|Ga0137396_10074965All Organisms → cellular organisms → Bacteria2372Open in IMG/M
3300012918|Ga0137396_10300097All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1188Open in IMG/M
3300012918|Ga0137396_10848538All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium671Open in IMG/M
3300012922|Ga0137394_10339830Not Available1282Open in IMG/M
3300012925|Ga0137419_10963443All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium705Open in IMG/M
3300012925|Ga0137419_11976358All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012927|Ga0137416_10224078All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300012927|Ga0137416_10820212All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium823Open in IMG/M
3300012930|Ga0137407_10129465All Organisms → cellular organisms → Bacteria2203Open in IMG/M
3300012930|Ga0137407_10493764All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1142Open in IMG/M
3300014166|Ga0134079_10086456All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1173Open in IMG/M
3300015053|Ga0137405_1353651All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4685Open in IMG/M
3300015245|Ga0137409_10007185All Organisms → cellular organisms → Bacteria11465Open in IMG/M
3300015245|Ga0137409_10601374All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium929Open in IMG/M
3300015264|Ga0137403_10239137All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1731Open in IMG/M
3300015357|Ga0134072_10333572All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300015371|Ga0132258_10153734All Organisms → cellular organisms → Bacteria5522Open in IMG/M
3300015372|Ga0132256_102636272All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300018431|Ga0066655_10020561All Organisms → cellular organisms → Bacteria3067Open in IMG/M
3300018431|Ga0066655_11131840All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300018433|Ga0066667_10006115All Organisms → cellular organisms → Bacteria5324Open in IMG/M
3300018433|Ga0066667_10046242All Organisms → cellular organisms → Bacteria2591Open in IMG/M
3300018433|Ga0066667_10475297All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1025Open in IMG/M
3300018468|Ga0066662_10052775All Organisms → cellular organisms → Bacteria2604Open in IMG/M
3300018482|Ga0066669_10086985All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2124Open in IMG/M
3300020170|Ga0179594_10034534All Organisms → cellular organisms → Bacteria → Proteobacteria1634Open in IMG/M
3300024330|Ga0137417_1455945All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1395Open in IMG/M
3300026295|Ga0209234_1021187All Organisms → cellular organisms → Bacteria2459Open in IMG/M
3300026296|Ga0209235_1024465Not Available3192Open in IMG/M
3300026297|Ga0209237_1022617All Organisms → cellular organisms → Bacteria3559Open in IMG/M
3300026298|Ga0209236_1010524All Organisms → cellular organisms → Bacteria5435Open in IMG/M
3300026309|Ga0209055_1091050All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1241Open in IMG/M
3300026310|Ga0209239_1018977All Organisms → cellular organisms → Bacteria3447Open in IMG/M
3300026312|Ga0209153_1275747All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300026313|Ga0209761_1004151All Organisms → cellular organisms → Bacteria → Proteobacteria9595Open in IMG/M
3300026316|Ga0209155_1004932All Organisms → cellular organisms → Bacteria5984Open in IMG/M
3300026318|Ga0209471_1041330All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2187Open in IMG/M
3300026324|Ga0209470_1281833All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium634Open in IMG/M
3300026328|Ga0209802_1047735All Organisms → cellular organisms → Bacteria2138Open in IMG/M
3300026342|Ga0209057_1049195All Organisms → cellular organisms → Bacteria2003Open in IMG/M
3300026529|Ga0209806_1158808All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium852Open in IMG/M
3300026552|Ga0209577_10156301All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWA2_73_351788Open in IMG/M
3300026557|Ga0179587_10116910All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1632Open in IMG/M
3300027671|Ga0209588_1097897All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300027671|Ga0209588_1220762All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium586Open in IMG/M
3300027748|Ga0209689_1195204All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium895Open in IMG/M
3300027787|Ga0209074_10136756All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300027873|Ga0209814_10144877All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1018Open in IMG/M
3300031716|Ga0310813_10215316All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1582Open in IMG/M
3300031820|Ga0307473_10493490All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium825Open in IMG/M
3300032180|Ga0307471_101436690All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium849Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil33.06%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil24.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil19.01%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.48%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1003955323300002558Grasslands SoilMTPATAKERLAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG*
JGI25385J37094_1007222413300002558Grasslands SoilMMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTQVVGFVREYALCSDCGASRLVTRAGG*
JGI25383J37093_1002622723300002560Grasslands SoilMTPATAKERLAAFLVARGGHNYCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG*
JGI25384J37096_1005311323300002561Grasslands SoilMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTQVVGFVREYALCSDCGASRLVTRAAG*
JGI25382J37095_1000266363300002562Grasslands SoilMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTQVVGFVREYALCSDCGASRLVTRAGG*
JGI25382J43887_1002208223300002908Grasslands SoilMTAKDRVAAFLVTRGGKNFCDACVAKALGIDPSTAYRAAMKMTNAVGFVREYAICSDCGASRLITRSSG*
JGI25386J43895_1002606823300002912Grasslands SoilAAFLVTRGGKNFCDACVAKALGIDPSTAYRAAMKMTNAVGFVREYAICSDCGASRLITRSSG*
Ga0066672_1057577923300005167SoilMTPTATAKQRLTALLIERRGRNFCDACAARAIGVDPSTAYRAAAKTMQATGFVREYALCSDCGVSRLITRATG*
Ga0066677_1001318343300005171SoilVTAGTARQRLGDFLSERRGRNFCDACAARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0066677_1014315713300005171SoilMTTGTARERLAAYLVARAGRNFCDACVARALDIDPSTAYRAATRTTRAMGFVREYALCSDCGASRLV
Ga0066677_1015682423300005171SoilMTPTATAKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066680_1047015313300005174SoilMMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTHVVGFVREYALCSDCGASRLVTRAGG*
Ga0066673_1001040033300005175SoilMTPTATAKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATR*
Ga0066673_1014939123300005175SoilMTAGTARERLAAYLIERAGRNFCDACAARALSIDPSTAYRAATRTTRAAGFVREYALCSDCGASRLVTRAIR*
Ga0066679_1008713823300005176SoilMTPPTARERLAAFLTARRGHNFCDACAARTIGIDPSTAYRAAARMVQAGGAVREYAICSDCGASRLITRATG*
Ga0066679_1013467623300005176SoilMTPPTARERLAAFLTARSGDNFCDACAARALGVDPSTAYRAAAKTAQVGGAVRQYALCSDCGASRLITRATG*
Ga0066679_1025804523300005176SoilMTQATAKQRLTALLVERRGRNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATG*
Ga0066685_1008552833300005180SoilMTAATARERLTGFLAARAGRSFCDACAAKELGIDPSTAYRAATRATRAAGFVREYALCSDCGASRLVTRATG*
Ga0066671_1068484713300005184SoilMAQATAKQRLTAFLVERRGRNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATR*
Ga0066671_1090629313300005184SoilVTAGTARERLGDFLSEHRGRNFCDACAARALGIDPSTAYRAAAKLTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0066676_1004433523300005186SoilMTTGTARERLAAYLVARAGRNFCDACVARALDIDPSTAYRAATRTTRAMGFVREYALCSDCGASRLVTRATG*
Ga0070708_10042838513300005445Corn, Switchgrass And Miscanthus RhizosphereMTPATARERLAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRAAG*
Ga0066686_1005271023300005446SoilVTASTARQRLGDFLSERRGRNFCDACAARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0066686_1021281023300005446SoilMTAGTARERLAAFLVARAGRNFCDACAARALDIDPSTAYRAATRTTRAMGFVREYALCSDCGASRLVTRVVG*
Ga0070697_10142933123300005536Corn, Switchgrass And Miscanthus RhizosphereMTQATAKQRLTALLVERRGHNFCDACAARAIGVDPSTAYRAAAKTMQAAGFVREYAICSDCGASRLITRATG*
Ga0070704_10106887523300005549Corn, Switchgrass And Miscanthus RhizosphereMMTAGTARQRLTAFLVARHERNFCDACAAKALGIDPSTAYRAAMRATRGPGFVREYALCSDCGASRLVTRATG*
Ga0066661_1042698923300005554SoilMTPTATAKQRLTRFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066707_1014133113300005556SoilPERDMTPTATAKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066704_1008233123300005557SoilLSAPVPPSSPDEAAPVEARERRVMTQATAKQRLTALLVERRGHNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066698_1108328123300005558SoilMTQATAKQRLTALLVERRGRNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066700_1020722333300005559SoilMTQATAKQRLTALLVERRGHNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGA
Ga0066670_1001782143300005560SoilEARAPRVMTQATAKQRLTALLVERRGRNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066670_1020312023300005560SoilRRQHGMTTGTARERLAAYLVARAGRNFCDACVARALDIDPSTAYRAATRTTRAMGFVREYALCSDCGASRLVTRATG*
Ga0066699_1025742123300005561SoilVTAGTARQRLGDFLSERRGRNFCDACVARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0066699_1029089023300005561SoilLSAPVPPSSPDEAAHVETRAPRVMTQATAKQRLTALLVERRGHNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATR*
Ga0066703_1023092223300005568SoilMTQATAKQRLTALLVERRGRNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATG*
Ga0066702_1088360023300005575SoilAGTARQRLGDFLSERRGRNFCDACVARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0066691_1033255623300005586SoilMTPTATAKQRLTTFLSERRGHNFCDACAGRAIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLISRAAG*
Ga0066654_1023695923300005587SoilMTPTATAKQRLTMFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066696_1084303013300006032SoilMTPPTARERLAAFLTARSGHNFCDACAARALGVDPSTAYRAAAKTSQAGGAVRQYALCSDCGASRLI
Ga0066656_1092004823300006034SoilMTAGTARERLAAYLIERAGRNFCDACAARALSIDPSTANRAATRTTRAAGFVREYALCSDCGASRLVTRAIR*
Ga0075417_1017734423300006049Populus RhizosphereMTAGTARERLTAFLVAQADRNFCDACLARAVGIDPSTAYRAATRAPRVARFVREYGLCSDCGASRLVTRATLL*
Ga0079222_1066044723300006755Agricultural SoilMMLGTARQRLTIFLAERPGSNFCDACAAKAVGIDPSTAYRAATRVGPGSGFVREYALCSGCGASRLVTRASA*
Ga0066653_1023082013300006791SoilVTAGTARQRLGDFLSERRSRNFCDACAARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0066658_1025603823300006794SoilMTQATAKQRLTALLVERRGHNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066665_1038339723300006796SoilATSKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0066665_1043276323300006796SoilAMTPATAKERLAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG*
Ga0066660_1114939223300006800SoilMTQATAKQRLTALLVERRGRNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATR*
Ga0075420_10114737613300006853Populus RhizosphereMTAGTARERLTAFLVAQADRNFCDACLARAVGIDPSTAYRAATRAPRVAGFVREYGLCSDCGASRLVTRATLL*
Ga0099791_1000863433300007255Vadose Zone SoilMTQATAKQRLTTLLGERRGDNFCDACAASAIGVDPSTAYRAAAKTMQATGFVREYAICSECGASRLITRATG*
Ga0099793_1055822223300007258Vadose Zone SoilVPPSSPDEAAPVEARAPRVVTQATAKQRLTALLVERRGRNFCDACAARAIGVDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRAAG*
Ga0099794_1009152123300007265Vadose Zone SoilMSILMTAKDRVAAFLVTRSGKNFCDACVAKALGIDPSTAYRAAMKMTIAVGFVREYALCSDCGASRLITRSSG*
Ga0066710_10015919933300009012Grasslands SoilMTAGTARERLAAFLVARAGRNFCDACAARALDIDPSTAYRAATRTTRAMGFVREYALCSDCGASRLVTRVVG
Ga0066710_10079781323300009012Grasslands SoilVTAGTARQRLGDFLSERRGRNFCDACVARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG
Ga0066709_10275284923300009137Grasslands SoilMTQATAKQRLTALLIEHRGRNFCDACAARSIGVDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0114129_1045661823300009147Populus RhizosphereMTVGTARERLADFLSERRGRNFCDACVARALAIDPSTAYRAAAKMTRAAGFIREYALCSDCGASRLVTRANG*
Ga0134082_1020240013300010303Grasslands SoilHEVCRHANRWWVVTAGTARQRLGDFLSERRGRNFCDACVARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0134109_1010867533300010320Grasslands SoilAGTARQRLGDFLSERRSRNFCDACAARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0134109_1025073113300010320Grasslands SoilVTAGTARQRLGDFLSERRGRNFCDACVARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRL
Ga0134084_1044165813300010322Grasslands SoilPATAKERLAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG*
Ga0134063_1074712213300010335Grasslands SoilMTPTATAKQRLTTFLIERRGHNFCDACAARSIGVDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0134062_1061421813300010337Grasslands SoilCNRPERDMTPTATAKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0137382_1012622713300012200Vadose Zone SoilMTPTATAKQRLTTFLIERRGHNFCDACAARGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG*
Ga0137399_1056193413300012203Vadose Zone SoilVPPSSPDEAAPVEARAPRVVTQATAKQRLTALLVERRGRNFCDACAARAIGVDPSTAYRAAAKTMQATGFVREYA
Ga0137399_1066226623300012203Vadose Zone SoilMTQASAKQRLTAHLAERRGHNFCDACAARAIGVDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRAAG*
Ga0137399_1148998613300012203Vadose Zone SoilMTPTATAKQRLTTFLVERRGHNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRAAG*
Ga0137360_1082247423300012361Vadose Zone SoilMTQATAKQRLTTLLGERRGDNFCDACAASAIGVDPSTAYRAAAKTMQATGFVREYAICSDCGASRLISRATG*
Ga0137361_1057449223300012362Vadose Zone SoilMTPPTARERLAAFLTARSGDNFCDACAARALGVDPSTAYRAAAKTAQAGGAVRQYALCSDCGASRLITRATG*
Ga0137358_1006495323300012582Vadose Zone SoilMTPTATAKQRLTTFLVERRGHNFCDACAARAIGFDPSTAYRAAAKTMQATGFVREYALCSDCGASRLISRATD*
Ga0137397_1001373223300012685Vadose Zone SoilMTPATAKERLAAFLVARDGSSFCDACAARALGIDPSTAYRAAAKTTQARGFVREYALCSDCGASRLITRSAG*
Ga0137396_1007496523300012918Vadose Zone SoilMTPVIAKDRVAAFLVTRSAHNFCDACMAKALGIDPSTAYRAAMKMTNAVGFAREYAICSDCGASRLITRALG*
Ga0137396_1030009723300012918Vadose Zone SoilMTPAPAKERLAAFLVTRSGRNFCDACAARALGIDPSTAYRAAMKTTQARSFVREYALCSDCGASRLVTRSTG*
Ga0137396_1084853813300012918Vadose Zone SoilVPPSSPDEAAPVEARAPRVVTQATAKQRLTALLVERRGRNFCDACAARAIGVDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATG*
Ga0137394_1033983023300012922Vadose Zone SoilMTQATAKQRLTALLAERRGHNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRAAG*
Ga0137419_1096344313300012925Vadose Zone SoilMTQATAKQRLTALLAERRGHNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLISRATG*
Ga0137419_1197635823300012925Vadose Zone SoilTQATAKQRLTALLAERRGHNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLISRATG*
Ga0137416_1022407813300012927Vadose Zone SoilMTPAPAKERLAAFLVTRSGRNFCDACAARALGIDPSTAYRAAMKTTQARSFVREYALCSD
Ga0137416_1082021223300012927Vadose Zone SoilMTQATAKQRLTALLVERRGRNFCDACAARAIGVDPSTAYRAAAKTMQATGFVREYAICSD
Ga0137407_1012946523300012930Vadose Zone SoilMTAATARERLTGFLAARAGRNFCDACAAKELGIDPSTAYRAATRSTRATGFVREYALCSDCGASRLVTRAGA*
Ga0137407_1049376423300012930Vadose Zone SoilMTPPTARERLAAFLTARSGDNFCDACAACALGVDPSTAYRAAAKTAQVGGAVRQYALCSDCGASRLITRATG*
Ga0134079_1008645613300014166Grasslands SoilVTAGTARQRLGDFLSERRGSNFCDACAARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG*
Ga0137405_135365173300015053Vadose Zone SoilMTPATAKERLAAFLVARDGSSFCDACAARALGIDPSTAYSCRGEDDAGPRFVREYALCSDCGASRLITRSAG*
Ga0137409_1000718573300015245Vadose Zone SoilMTQATAKQRLTALLAERRGHNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSECGASRLITRATG*
Ga0137409_1060137413300015245Vadose Zone SoilMTQATAKQRLTTLLGERRGDNFCDACAASAIGVDPSTAYRAAAKTMQATGFVREYAICS
Ga0137403_1023913723300015264Vadose Zone SoilMTAATARERLTGFLAARAGRNFCDACAAKELGIDPSTAYRAATRSTRATGFVREYALCSDCGASRLVTRAGG*
Ga0134072_1033357223300015357Grasslands SoilMTPTATATQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATR*
Ga0132258_1015373463300015371Arabidopsis RhizosphereLAGNVLLSRSMTVMTARQRLSDFLLAHAGRNFCDACAARAIGIDPSTAYRAATRSTRLTGFVREYALCSDCGASRLITRAAI*
Ga0132256_10263627213300015372Arabidopsis RhizosphereMTVMTARQRLSDFLLAHAGRNFCDACAARAIGIDPSTAYRAATRSTRLTGFVREYALCSDCGASRLITRAAI*
Ga0066655_1002056143300018431Grasslands SoilMTPATAKERLAAFLVAHGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG
Ga0066655_1113184023300018431Grasslands SoilATAKQRLTMFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG
Ga0066667_1000611533300018433Grasslands SoilMTPATAKERLAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG
Ga0066667_1004624213300018433Grasslands SoilMTPTATAKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG
Ga0066667_1047529723300018433Grasslands SoilMTAGTARERLAAYLIERAGRNFCDACAARALSIDPSTAYRAATRTTRAAGFVREYALCSDCGASRLVTRAIR
Ga0066662_1005277533300018468Grasslands SoilEYEHRRRAMTPATAKERLAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG
Ga0066669_1008698523300018482Grasslands SoilVTAGTARQRLGDFLSERRGRNFCDACAARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG
Ga0179594_1003453423300020170Vadose Zone SoilMTAATARERLTGFLAARAGRNFCDACAAKELGIDPSTAYRAATRSTRATGFVREYALCSDCGASRLVTRAGA
Ga0137417_145594523300024330Vadose Zone SoilMTQATAKQRLTALLAERRGHNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLISRATG
Ga0209234_102118723300026295Grasslands SoilMTPTATAKQRLTTFLIERRGHNFCDACAARGIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATG
Ga0209235_102446513300026296Grasslands SoilMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTQVVGFVREYALCSDCGASRLVTRA
Ga0209237_102261733300026297Grasslands SoilMTAKDRVAAFLVTRGGKNFCDACVAKALGIDPSTAYRAAMKMTNAVGFVREYAICSDCGASRLITRSSG
Ga0209236_101052443300026298Grasslands SoilMMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTHVVGFVREYALCSDCGASRLVTRAGG
Ga0209055_109105023300026309SoilMTPPTARERLAAFLTARRGHNFCDACAARTIGIDPSTAYRAAARMVQAGGAVREYAICSDCGASRLITRATG
Ga0209239_101897743300026310Grasslands SoilMMTPATAKERLAAFLVARGGYNYCDACAARAIGIDPSTAYRAAAKTTQVVGFVREYALCSDCGASRLVTRAGG
Ga0209153_127574723300026312SoilMAQATAKQRLTAFLVERRGRNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATR
Ga0209761_100415173300026313Grasslands SoilMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTQVVGFVREYALCSDCGASRLVTRAGG
Ga0209155_100493283300026316SoilMTPTATAKQRLTTFLIERRGHNFCDACAGRGIGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATR
Ga0209471_104133023300026318SoilMTQATAKQRLTALLVERRGRNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRATG
Ga0209470_128183323300026324SoilRLTGFLAARAGRSFCDACAAKELGIDPSTAYRAATRATRAAGFVREYALCSDCGASRLVTRAGA
Ga0209802_104773533300026328SoilAAFLVARGGHNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG
Ga0209057_104919523300026342SoilMTTGTARERLAAYLVARAGRNFCDACVARALDIDPSTAYRAATRTTRAMGFVREYALCSDCGASRLVTRATG
Ga0209806_115880823300026529SoilMMTPATAKERLAAFLVARGGYNFCDACAARAIGIDPSTAYRAAAKTTQAVGFVREYALCSDCGASRLVTRAAG
Ga0209577_1015630123300026552SoilWWVVTAGTARQRLGDFLSERGGRNFCDACVARALGIDPSTAYRAAAKMTRAAGFVREYALCSDCGASRLVTRAGG
Ga0179587_1011691023300026557Vadose Zone SoilMTQATAKQRLTTLLGERRGDNFCDACAASAIGVDPSTAYRAAAKTMQATGFVREYAICSECGASRLITRATG
Ga0209588_109789723300027671Vadose Zone SoilMSILMTAKDRVAAFLVTRSGKNFCDACVAKALGIDPSTAYRAAMKMTIAVGFVREYALCSDCGASRLITRSSG
Ga0209588_122076213300027671Vadose Zone SoilAPVEARAPRVMTQATAKQRLTTLLGERRGDNFCDACAASAIGVDPSTAYRAAAKTMQATGFVREYAICSECGASRLITRATG
Ga0209689_119520423300027748SoilMTPPTARERLAAFLTARSGDNFCDACAARALGVDPSTAYRAAAKTAQVGGAVRQYALCSDCGASRLITRATG
Ga0209074_1013675623300027787Agricultural SoilMMLGTARQRLTIFLAERPGSNFCDACAAKAVGIDPSTAYRAATRVGPGSGFVREYALCSGCGASRLVTRASA
Ga0209814_1014487723300027873Populus RhizosphereMTAGTARERLTAFLVAQADRNFCDACLARAVGIDPSTAYRAATRAPRVARFVREYGLCSDCGASRLVTRATLL
Ga0310813_1021531623300031716SoilMTVMTARQRLSDFLLAHAGRNFCDACAARAIGIDPSTAYRAATRATRLTGFVREYALCSDCGASRLITRAAI
Ga0307473_1049349023300031820Hardwood Forest SoilTAFLVERRGDNFCDACAARAVGIDPSTAYRAAAKTMQATGFVREYALCSDCGASRLITRATG
Ga0307471_10143669023300032180Hardwood Forest SoilMTPTATAKQRLTAFLVEQRGRNFCDACAARAIGIDPSTAYRAAAKTMQATGFVREYAICSDCGASRLITRAAG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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