Metagenome Family F072230

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072230
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	98 residues
Representative Sequence	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDAAQSGEKVVATSDTALIQSLSPKVVDRLQSVQGYIIMADI
Number of Associated Samples	111
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.35 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	92.56 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.512 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.355 % of family members)
Environment Ontology (ENVO)	Unclassified (30.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.372 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.61% β-sheet: 0.00% Coil/Unstructured: 48.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00486	Trans_reg_C	96.69
PF00512	HisKA	1.65
PF03544	TonB_C	0.83
PF12019	GspH	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.51 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.51 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.51 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	72.73 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	72.73 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	52.07 %
Unclassified	root	N/A	21.49 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	17.36 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	52.07 %
Unclassified	root	N/A	21.49 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	17.36 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	52.07 %
Unclassified	root	N/A	21.49 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.61 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	52.07 %
Unclassified	root	N/A	21.49 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	2.48 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.65 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.65 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	52.07 %
Unclassified	root	N/A	21.49 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	2.48 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.65 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig190871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	727	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig212051	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300000880\|AL20A1W_1458908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300000891\|JGI10214J12806_10775799	Not Available	1196	Open in IMG/M
3300001305\|C688J14111_10159362	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	695	Open in IMG/M
3300001333\|A21PFW6_1123521	Not Available	942	Open in IMG/M
3300001536\|A1565W1_11478325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	772	Open in IMG/M
3300002568\|C688J35102_119385989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	685	Open in IMG/M
3300002915\|JGI25387J43893_1015637	Not Available	1041	Open in IMG/M
3300004114\|Ga0062593_102239164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300004114\|Ga0062593_103285877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300004153\|Ga0063455_101672354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300004156\|Ga0062589_100253783	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300004479\|Ga0062595_100188373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1259	Open in IMG/M
3300005171\|Ga0066677_10599798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300005179\|Ga0066684_10224874	Not Available	1223	Open in IMG/M
3300005184\|Ga0066671_10446549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	830	Open in IMG/M
3300005330\|Ga0070690_101688472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300005336\|Ga0070680_101154344	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005338\|Ga0068868_101380553	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	656	Open in IMG/M
3300005355\|Ga0070671_101539369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300005366\|Ga0070659_101206671	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300005434\|Ga0070709_11641994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300005456\|Ga0070678_100518156	Not Available	1054	Open in IMG/M
3300005535\|Ga0070684_100165749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2005	Open in IMG/M
3300005547\|Ga0070693_101488774	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005547\|Ga0070693_101557411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300005549\|Ga0070704_102019591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300005566\|Ga0066693_10027295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1778	Open in IMG/M
3300005569\|Ga0066705_10183885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1301	Open in IMG/M
3300005575\|Ga0066702_10693151	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300005718\|Ga0068866_10427884	Not Available	860	Open in IMG/M
3300005938\|Ga0066795_10019634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1914	Open in IMG/M
3300005938\|Ga0066795_10121105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	780	Open in IMG/M
3300006755\|Ga0079222_10074134	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300006864\|Ga0066797_1113676	Not Available	948	Open in IMG/M
3300006918\|Ga0079216_11761966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300006954\|Ga0079219_10727594	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300009090\|Ga0099827_11804614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300009098\|Ga0105245_11195175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	808	Open in IMG/M
3300009137\|Ga0066709_103245869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300009147\|Ga0114129_10190146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2788	Open in IMG/M
3300009176\|Ga0105242_12888714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300009551\|Ga0105238_11603511	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	681	Open in IMG/M
3300010304\|Ga0134088_10695753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300010326\|Ga0134065_10508244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300010333\|Ga0134080_10612742	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300010373\|Ga0134128_12625542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300010397\|Ga0134124_11639268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300010399\|Ga0134127_12516249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300010399\|Ga0134127_13009859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300010403\|Ga0134123_10546358	Not Available	1101	Open in IMG/M
3300011119\|Ga0105246_11921564	Not Available	569	Open in IMG/M
3300011444\|Ga0137463_1221876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	707	Open in IMG/M
3300012205\|Ga0137362_10791219	Not Available	813	Open in IMG/M
3300012207\|Ga0137381_11343595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300012208\|Ga0137376_10584726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	967	Open in IMG/M
3300012212\|Ga0150985_101098213	Not Available	1305	Open in IMG/M
3300012285\|Ga0137370_10907130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M
3300012349\|Ga0137387_10801934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300012357\|Ga0137384_11504975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300012960\|Ga0164301_11745262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300012961\|Ga0164302_11716471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300013102\|Ga0157371_10546928	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300013501\|Ga0120154_1122877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300013758\|Ga0120147_1017058	Not Available	1444	Open in IMG/M
3300013764\|Ga0120111_1017276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2077	Open in IMG/M
3300013831\|Ga0120126_1025702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300014823\|Ga0120170_1084626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	655	Open in IMG/M
3300015051\|Ga0137414_1218125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4375	Open in IMG/M
3300015190\|Ga0167651_1004505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3244	Open in IMG/M
3300015245\|Ga0137409_11362265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300017659\|Ga0134083_10252433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	738	Open in IMG/M
3300018071\|Ga0184618_10025903	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1973	Open in IMG/M
3300018433\|Ga0066667_10438726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1064	Open in IMG/M
3300019875\|Ga0193701_1053952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	810	Open in IMG/M
3300019888\|Ga0193751_1194243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	686	Open in IMG/M
3300019999\|Ga0193718_1091952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300020008\|Ga0193757_1010330	Not Available	901	Open in IMG/M
3300020015\|Ga0193734_1016219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1406	Open in IMG/M
3300020059\|Ga0193745_1020133	Not Available	1454	Open in IMG/M
3300020059\|Ga0193745_1125879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300021073\|Ga0210378_10162226	Not Available	861	Open in IMG/M
3300021408\|Ga0193708_1045589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	904	Open in IMG/M
3300021968\|Ga0193698_1000563	All Organisms → cellular organisms → Bacteria	4812	Open in IMG/M
3300022756\|Ga0222622_11100967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	584	Open in IMG/M
3300022756\|Ga0222622_11277530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300024279\|Ga0247692_1054877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300025857\|Ga0209014_10238807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300025899\|Ga0207642_10329126	Not Available	895	Open in IMG/M
3300025910\|Ga0207684_10338846	Not Available	1295	Open in IMG/M
3300025918\|Ga0207662_10578930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	779	Open in IMG/M
3300025920\|Ga0207649_10127082	Not Available	1727	Open in IMG/M
3300025931\|Ga0207644_11299224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300025934\|Ga0207686_10802122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	755	Open in IMG/M
3300026116\|Ga0207674_10056733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3974	Open in IMG/M
3300026300\|Ga0209027_1034066	Not Available	1924	Open in IMG/M
3300026331\|Ga0209267_1120933	Not Available	1103	Open in IMG/M
3300026331\|Ga0209267_1281608	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300026529\|Ga0209806_1202190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	692	Open in IMG/M
3300026548\|Ga0209161_10139334	Not Available	1413	Open in IMG/M
3300027651\|Ga0209217_1001260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7986	Open in IMG/M
3300027681\|Ga0208991_1205691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300027682\|Ga0209971_1039426	Not Available	1137	Open in IMG/M
3300027738\|Ga0208989_10208135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	646	Open in IMG/M
3300027765\|Ga0209073_10036301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1556	Open in IMG/M
3300027775\|Ga0209177_10161663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	768	Open in IMG/M
3300028047\|Ga0209526_10041370	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3242	Open in IMG/M
3300028719\|Ga0307301_10248701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300028799\|Ga0307284_10457498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300028814\|Ga0307302_10583430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300028828\|Ga0307312_10185949	Not Available	1330	Open in IMG/M
3300028828\|Ga0307312_10403264	Not Available	898	Open in IMG/M
3300028828\|Ga0307312_11187357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300028876\|Ga0307286_10169728	Not Available	786	Open in IMG/M
3300028881\|Ga0307277_10080812	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1360	Open in IMG/M
3300028884\|Ga0307308_10318742	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	745	Open in IMG/M
3300028885\|Ga0307304_10154239	Not Available	959	Open in IMG/M
3300031720\|Ga0307469_12172780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300032002\|Ga0307416_101513041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	777	Open in IMG/M
3300032174\|Ga0307470_11379993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.30%
Host-Associated	Host-Associated	15.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.17%
Plants	Host-Associated → Plants	15.70%
Aquatic	Environmental → Aquatic	4.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Sediment	Environmental → Aquatic → Sediment	3.31%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	14.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021408	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_03783880	2124908032	Soil	VVSTRVKLTAAFVAGMIAVAITLFLAVLTARNNAVYHDIAQYAAAQGELAARVIGDAAQSGENVFATSDTALIPLLSPKVVDRLQVVPGYIVVVDSGGRAVYRSS
Perma_A_C_01977020	2124908032	Soil	MLSTRVKLTATFVAGLIAVTVTLFLSLLTARNAAVYHDIAQYAATQGDLAGRVIIEAAQSGEELVATDDTALVQRLSPGLAARLNAIPGYLNIVDTK
AL20A1W_14589082	3300000880	Permafrost	MIAVAITLFLAVLTARNNAVYHDIAQYAAAQGELAARVITAAAQSGGKVLAAGDTALIPLLSPEIVDRLQAVPGYIVVVDTAGR
JGI10214J12806_107757991	3300000891	Soil	MFSTRVKLTAAFLAGLITVTIILFLAVLAARSDAVYNDIAQYAAAQGELAAGVITDAAQAGENVFATSDTALIARLAPRVVSRLRTVPGYIVVVDTTGRAVYRSDDVLRLQGTDMATLQGQL
C688J14111_101593621	3300001305	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVITDAEQSGERVFASDDTALIQALSPKVVDRLQSIPGYIVVVDNQGRAVYRSSDVMRLQGGDMV
A21PFW6_11235211	3300001333	Permafrost	MIAVAITLFLAVLTARNNAVYHDIAQYAAAQGELAARVITDAAQSGGKVLAAGDTALIPLLS
A1565W1_114783251	3300001536	Permafrost	VVSTRVKLTLAFVAGMVAVTVTLFLALLTARNNTVYHDIAQYAAAQGDLAARVITDASQSGEKVVAASDTALISLLSPKVVERLQAVPGYIV
C688J35102_1193859891	3300002568	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVITDAEQSGERVFASDDTALIQALSPKVVDRLQSIPGYIVVVDNQGRAVYRSSDVMRLQGGDM
JGI25387J43893_10156372	3300002915	Grasslands Soil	MLSTRIKLTAAFVAGLIAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDAAQSGETVVATGDTALIQLLSPRLVDRLQSIPGYIV
Ga0062593_1022391641	3300004114	Soil	VVSTRIKLTAAFVAGMITVAVTLFLAVLTARNNAVYHDIAQYAAAQGDLAARVITEAARAGDSIVATRDTALIQRLTYKVVDRLQ
Ga0062593_1032858772	3300004114	Soil	LVSTRVKLTAAFVLGLVAVTITLFLALLTARNDAVYHDIAQYAATQGDLAARIIADEARTGERVIATDDTALVPQLARRIVERLDAIPGYLVVVDTAGRAVYRSPDVIRLKNGDTQ
Ga0063455_1016723541	3300004153	Soil	VFSTRVKLTAAFVAGLIAITVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDASQSGENVMATSDTALVPLLSPLLAEHLQSIPGYIVVVDTAGRAVYRSADVMRLQG
Ga0062589_1002537833	3300004156	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAERNNGVYNDIALYAASQGDLAARIITDAAQSGQTVVATADTALIQSLAPDIVDR
Ga0062595_1001883731	3300004479	Soil	MITVAVTLFLAVLTARNNAVYHDIAQYAAAEGDLAARVITDASRAGDSIVATRDTALIQRLTYKVVDRLQAVPGYIVVVDTLGRAVYRS
Ga0066677_105997981	3300005171	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARKNAVYHDIAQYAAAQGDLAARIITDAAQSGQKVVVPSNTALVPSLSPKIVERLQSVPGYVVVVDTAGRAVYRS
Ga0066684_102248741	3300005179	Soil	MLSTRLKLTAAFVAGLIGVTITLFLAILAARNNAVYHDIAQYAAAQGDLAGRIIGDAEHAGEKVVATSDTALIQRLSPKIVDRLQVVPGYIVVVDTAGRAVYRS
Ga0066671_104465491	3300005184	Soil	MISTRVKLTAAFIVGLVAVTITLFLALLAARNNAVYHDIAQYAAAQADLAARVIAEAAQSGQNVVARGDTATIPLLSPKIVERLQSVPGYIVVVDTAGRAVYRSSEVMRLQGSDMNTLQTQL
Ga0070690_1016884722	3300005330	Switchgrass Rhizosphere	MLSTRVKLTAAFVAGLAAVTITLFLAVLAARNDAVYHDIALYAAAQGDLAARIITDAEQSGERVVATTDTALVQSLSP
Ga0070680_1011543441	3300005336	Corn Rhizosphere	MLSTRVKLTVAFVAGLIAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARIITDAQQAGETVVATADTALIQRLSPRL
Ga0068868_1013805531	3300005338	Miscanthus Rhizosphere	MFSTRVKLTAAFVAGLIAITITLFLAILAARSNAVYHDIAQYAAAQGDLAARVITDADQAGEAVMATSDTALIPLLTPRLANRLQSVPGYIVVVDTAGR
Ga0070671_1015393691	3300005355	Switchgrass Rhizosphere	MLSTRVKLTAAFVAGLAAVTITLFLAVLAARNDAVYHDIALYAAAQGDLAARIITDAEQSGERVVATSDTALVQSLSPKI
Ga0070659_1012066712	3300005366	Corn Rhizosphere	VVSTRVKLTAAFVAGMITVAVTLFLAVLTARNNAVYHDIAQYAAAEGDLAARVITDASRAGDSIVATRDTALIQRLTYKVVDRLQAVPGYIVVVDTLGRAVYRSSDVMRLKTDDMA
Ga0070709_116419941	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNNAVYHDIALYAAAQGDLAARVITDAYQSGEKVVATSDTALIQRMSPKVVDRLQAIPGYIVVVDTLGRAVYRSSDVMRLQGTDMATLQ
Ga0070678_1005181561	3300005456	Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVIAEAEQTGQRVVATSDTALIQSLSPKIVDRLQSIPGYIVVVDNRGRAVYRSNDVLRL
Ga0070684_1001657491	3300005535	Corn Rhizosphere	VVSTRVKLTAAFVAGMITVAVTLFLAVLTARNNAVYHDIAQYAAAQGDLAARVITEAARAGDSIVATRDTALIQRLTYKVVDRLQGVPGYIVVVDTLGRAV
Ga0070693_1014887742	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTRVKLTVAFVAGLIAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARIITDAQQAGETVVATADTALIQRLSPRLVDRLQSVPGYIVVV
Ga0070693_1015574111	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MFSTRVKLTAAFVAGLVAITITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVINEAAQSGEKVMGSSDTALVLALSPKLVDRLQSIPGYVVVVDTAGREVYRSADVMRLQGTDLQT
Ga0070704_1020195911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MISTRVTLTAAFVAGLVAVTVTLFLAVLAARNDAVYHDIALYAAAQGDLAARVITDAERSEGKVMATSDTALIALLSPNVV
Ga0066693_100272953	3300005566	Soil	MLSTRLKLTAAFVAGLIGVTITLFLAILAARNNAVYHDIAQYAAAQGDLAGRIIGDAEHAGEKVVATSDTALIQRLSPKIVDRLQVVPGYIVVVDT
Ga0066705_101838851	3300005569	Soil	MLSTRLKLTAAFVAGLIGVTITLFLAILAARNNAVYHDIAQYAAAQGDLAGRIIGDAEHAGEKVVATSDTALIQRLSPKIVDRLQ
Ga0066702_106931512	3300005575	Soil	MISTRVKLTAAFVAGLIAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARIITDASQSGQGVMATRDTALIQQLSSRIVDRLQSVPGYIVVVDTAGRAVYRSPEVMRLQG
Ga0068866_104278841	3300005718	Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVIAEAEQTGQRVVATSDTALIQSLSPKIVDRLQS
Ga0066795_100196341	3300005938	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAVRNNAVYHDIAQYAAAQGDLAARVITDAEQSGEKVVATSDTALIARLELKVVDRLQSVPGYIVVVDTLGRA
Ga0066795_101211052	3300005938	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLALLAARNNAVYHDVAQYAAAQGDLAARVITEAEQSGEKVMATSDTALIALLAPKVVERLQSVPGYIVVVDT
Ga0079222_100741343	3300006755	Agricultural Soil	MFSTRVKLTAAFVVGLITVTITLFLALLAARSNAVYHDVAQYAAAQGDLAARVIGDAAQSGESVLATTDTALIPLLSPKIIDRLQSIPGYLVVVDTAGRAVY
Ga0066797_11136762	3300006864	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDAEQSGEKVVATSDTALIALLKPKVIDRLQSVPGYIVVVDTVGRAVYRSN
Ga0079216_117619661	3300006918	Agricultural Soil	VLSTRVKLTAAFVAGLVAVTATLFLAVLTARNNAVYNDIAQYAAAQGNLAARVILDAAESGEKLLTTSDTAIIPLLAPKVAGRLEALPGY
Ga0079219_107275941	3300006954	Agricultural Soil	MISTRVKLTAAFVVGLVTVTVTLFLALLAARSNAVYHDIAQYAAAQADLAAHVIVGAQQSGENVMATSDTALVPALSPRIIDRLQLIPGYIVVVDTAGRAVYRSSDVMRLQ
Ga0099827_118046142	3300009090	Vadose Zone Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNNAVYHDIALYAAAQGDLAARVITDAVQSNEKVLATSDTALIPLLSPK
Ga0105245_111951751	3300009098	Miscanthus Rhizosphere	MISTRVTLTAAFVAGLVAVTVTLFLAVLAARNDAVYHDIALYAAAQGDLAARVITDAERSEGKVMATSDTALIALLSPNVVNRLQALPGYIVVVDTMG
Ga0066709_1032458692	3300009137	Grasslands Soil	MFSTRVKLTAAFVAGLIAVTVTLFLAVLAARNDAVYHDIAQYAAAQGDLAARVIADAGQSGESVMVKSDTAPIPLLNPIIADRLQSVPGYIVVVDTAGRAVYSSSEVTRLQGTDMNTLKT
Ga0114129_101901464	3300009147	Populus Rhizosphere	MSTRVKLTAAFVLGLIAVTVTLFLALLAARSNAVYHDIALYAAAQGDLAARVITDAAQAGEKVVVTDDTALIPALSP
Ga0105242_128887142	3300009176	Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLIAVTIALFLAVLAERNNGVYNDIALYAASQGDLAARVITDAAQSGETVVATADTALIQSLAPSLVDRLQAVPGYIVVVDTLGRAVYRSPDVMRLQTG
Ga0105238_116035112	3300009551	Corn Rhizosphere	VVSTRVKLTAAFVAGMITVAVTLFLAVLTARNNAVYHDIAQYAAAEGDLAARVITDASRAGDSIVATRDTALIQRLTYKVVDRLQA
Ga0134088_106957532	3300010304	Grasslands Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIAQDAATQGDLAARVITDAAQSGEKVVVPSDKALVASVSPKIAERLQSVPGYIVVVDTA
Ga0134065_105082442	3300010326	Grasslands Soil	MLSTRIKLTAAFVAGLIAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVIGDAAQSGETVVATRDTALMQLLSPRIVDRLQSIPGYIVVVDTL
Ga0134080_106127421	3300010333	Grasslands Soil	MLSTRLKLTAAFVAGLIGVTITLFLAILAARNNAVYHDIAQYAAAQGDLAGRIIGDAEHAGEKVVVTSDTALIQRLSPKLVDRLQVVPGYIVVVDTAGRAVYRSPDVMRLQGNDMATLQTQL
Ga0134128_126255422	3300010373	Terrestrial Soil	MISTRVTLTAAFVAGLVAVTVTLFLAVLAARNDAVYHDIALYAAAQGDLAARVITDAERSEGKVMATSDTALIALLSPNVVNRLQALP
Ga0134124_116392682	3300010397	Terrestrial Soil	MFSTRVKLTAAFVVGLITVTITLFLALLAARSNAVYHDVAQYAAAQGDLAARVIGDAAQSGESVLATTDTALIPLLSPKIIDRLQSIPGYLVVVDTAGRAVYRSADVMRLQGSDMNTLQ
Ga0134127_125162491	3300010399	Terrestrial Soil	MFSTRVKLTAAFVAGLVAITITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVINEAAQSGEKVMGSSDTALVLALSPKLVDRLQSIPGYVVVVDTAGREVYRSADVMRLQGTDLQTLQS
Ga0134127_130098591	3300010399	Terrestrial Soil	MFSTRVKLTAAFVAGLIAITITLFLAILAARSNAVYHDIAQYAAAQGDLAARVITDADQAGESVMGTSDTALIQLLAPNLARRLQSVPG
Ga0134123_105463581	3300010403	Terrestrial Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAGRVIAEAEQSGQTVLATSDTALIQSLSPKIVDRLQSIPGYIVVVDNQGRAVYRSSDVL
Ga0105246_119215641	3300011119	Miscanthus Rhizosphere	MFSTRVKLTAAFVAGLVAITITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVINEAAQSGEKVMGSSDTALVLALSPKLVDRLQSIPGYVVVVDTAGREVYRS
Ga0137463_12218761	3300011444	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIALYAAAQGDLAARAIMDAEKSGEKVMASSDTALIALLSPKVVDRLQSVPGFIVVVDTTG
Ga0137362_107912191	3300012205	Vadose Zone Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARKNAVYHDISLYAAAQGDLAARVITDAVQSKENVFVTSDTALIPRLSPKVADRLQ
Ga0137381_113435952	3300012207	Vadose Zone Soil	MLSTRVKLTAAFVAGLAAVTITLFLAVLAARNNAVYHDIALYAAAQGDLAARVITDAVQSKENVFVTSDTALIPLLSPKVAYRLQSVPG
Ga0137376_105847262	3300012208	Vadose Zone Soil	MLSTRVKLTVAFVAGLVAVTVTLFLAVLAARNNAVYHDVAQYAAAQGDLAARIITDAAQSDEKVVSTSDTALVQSLYRKVIERLQ*
Ga0150985_1010982133	3300012212	Avena Fatua Rhizosphere	MLSTRVKLTAAFVSGLVAVTITLFLAILAARNDAVYHDIAQYAAAQGDLAARVITDAEQSGERVFASDDTALIQSLSPK
Ga0137370_109071301	3300012285	Vadose Zone Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDAAQSGEKVVATSDTALIQSLSPKVVDRLQSVQGYIIMADI
Ga0137387_108019341	3300012349	Vadose Zone Soil	VVSTRVKLTAAFVAGLIAVTVTLFLAVLTARNNAVYHDIAQYAAAQGDLAARIITDAAQSGESVVATKDTALIPLLSPKLVERLQAVPGYIVVVDTGGRAVYRSNDVMRLKAQDMTTLQT
Ga0137384_115049752	3300012357	Vadose Zone Soil	MLSTRVKLTAAVVAGLATVTITLFLAVLAARNNAVYHDIALYAAAQGDLAARVITDAVQSKENVFVTSDTALIPLLSPKVAYRLQS
Ga0164301_117452622	3300012960	Soil	MLSTRVKLTAAFVAGLAAVTLTLFLAVLAARNDAVYHDIALYAAAQGDLAARIITDAEQSGERVVATSDTALVQSLSPKIVDRLQSVPGFIVVVDNRGRAVYRSSDVMRLQGGDMGTLQT
Ga0164302_117164711	3300012961	Soil	MLSTRVKLTVAFVLGLIAITATLFLAVLAARNNAVYHDIAQYAAAQGDLAARVILDAAQSDSSVFATSDTALIAKLSPKVVDRLQAVPGYL
Ga0157371_105469282	3300013102	Corn Rhizosphere	MFSTRVKLTAAFVVGLITVTITLFLALLAARSNAVYHDVAQYAAAQGDLAARVIGDAAQSGESVLATTDTALIPLLSPKIIDRLQSIPGYLVVGDTAGRAVYRSADVMRLQGSDMNTLQT
Ga0120154_11228772	3300013501	Permafrost	VVSTRVKLTAAFVTGMIAVAITLFLAVLTARNSAVYHDIAQYAAAQGDLAARVITDAAQAGGKVLAADDTALIPLLSSKVVDRLQAVPGYIVVVDTAGRAVYRSSDVM
Ga0120147_10170583	3300013758	Permafrost	MIAVAITLFLAVLTARNNAVYHDIAQYAAAQGDLAARVIADAAQSGGKVLAAGDTALIPLLSSKVVDRLQAVPGYIVVVDTAGRAVYRSSDVMRLRDQDM
Ga0120111_10172761	3300013764	Permafrost	MIAVAITLFLAVLTARNSAVYHDIAQYAAAQGDLAARVITDAAQAGGKVLAADDTALIPLLSSKVVDRLQAVPGYIVVVDTAGRAVYRSSDVMRLKDEDMT
Ga0120126_10257022	3300013831	Permafrost	VVSTRVKLTAAFVAGMITVAVTLFLAVLTARNNAVYHDIAQYAAAEGDLAARVITDASRAGDSIVATRDTALIQRLTYKVVDRLQAVPGYI
Ga0120170_10846261	3300014823	Permafrost	MIAVAITLFLAVLTARNNAVYHDIAQYAAAQGELAARVITDAAQSGGKVLAAGDTALIPLLSPEIVDRLQAVPG
Ga0137414_12181255	3300015051	Vadose Zone Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLARETIAVYHDIALYAAAQGDLAARVITDAVQSKENVVTSDTALIPRLSPKVATGSSRSLDT*
Ga0167651_10045053	3300015190	Glacier Forefield Soil	VVSTRAKLTIAFVAGMIAVAITLFLAVLTARNDAVYHDIAQYAAAQGDLAARVITDAAHSGEKVLANGDTALIPLLAPRLVDRLQAVPGYIVVVDTARTTSCA*
Ga0137409_113622651	3300015245	Vadose Zone Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNNAVYHDIALYAAAQGDLAARVITDAVQSKENVFVTSDTALIPRLSQKVADRLQSVPGYIVVVDTAGRAVYR
Ga0134083_102524332	3300017659	Grasslands Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNNAVYHDIAQYAATQGDLAARIITDAAQSGEKVVVPSDKALVASVSPKIAERLQSVPGYIV
Ga0184618_100259033	3300018071	Groundwater Sediment	MLSTRVKLTAAFVAGLIAVTATLVLAVLTARNNAVYHDIALYAAAQGDLAARVITDAAKSGDSVLATSDTALIQRLSPKVVSRLQSVPGFIVVLDTAGRAV
Ga0066667_104387261	3300018433	Grasslands Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNNAVYHDIAQYAATQGDLAARIITDAAQSGEKVVVPSDTALVASVSPKIAERLQSIPGYIVVVDTAGRAVYRSADVMRLQGTDMNT
Ga0193701_10539521	3300019875	Soil	MLSTRVKLTAAFVAGLIAVTATLVLAVLTARNNAVYHDIALYAAAQGDLAARVITDAAKSGDSVLATSDTALIQRLSPKVVSRLQSVPGYIVVVDTAGRAVYRSNDVMALQ
Ga0193751_11942432	3300019888	Soil	VVSTRAKLTAAFVAGMVVVTVTLFLAVLTARNNAVYHDIAQYAAAQGDLAARVITDAVQSDQKVVATADTALIPRLSTKVVDRLQAVPGYIVVVDTAG
Ga0193718_10919521	3300019999	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDAEQSGEKVMATSDTALIALLAPKVAERLQSVPGFIVV
Ga0193757_10103301	3300020008	Soil	MLSTRVKLTVAFVAGLIAVTGTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVILDAAQSDSSVFATSDTALIAKLSPKVVDRLQAVPGYLVVIDSTGRAVYRSPDVM
Ga0193734_10162191	3300020015	Soil	MLSTRVKLTAAFVAGLIAVTATLVLAVLTARNNAVYHDIALYAAAQGDLAARVITDAAKSGDSVLATGDTALIQRLSPRVVSRLQSVPGSIVVVDTA
Ga0193745_10201331	3300020059	Soil	VVSTRVKLTAAFVAGMITVAVTLFLAVLTARNNAVYHDIAQYAAAEGDLAARVITDASRAGDSIVATRDTALIQRLTY
Ga0193745_11258791	3300020059	Soil	MISTRVTLTAAFVAGLVAVTVTLFLAVLAARNDAVYHDIALYAAAQGDLAARVITDAEKAEGNVMATSDTALIALLSPNVVNRLQALPGYIVVVDT
Ga0210378_101622261	3300021073	Groundwater Sediment	MLSTRVKLTAAFVAGLVTVTITLFLAVLAARNDAVYHDIAQYAAAQGELAARIITDAAKSGDSVVATSDTALIQRLTRRIVDRLQSVP
Ga0193708_10455891	3300021408	Soil	MFSTRVKLTAAFLAGLVAVTVTLFLAVLAARNNAVYHDIALYAAAQGDLAASVITDAEQANEKVMATSDTALIALLSPKVIERLQLVPGYIVIVDTTGRAVYRSPDVMRHA
Ga0193698_10005638	3300021968	Soil	MLSTRVKLTVVFVAGLIAVTGTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVILDAAQSDSSVFATSDTALIASLSPKVVDRLQAVPGYLVVVDTTG
Ga0222622_111009672	3300022756	Groundwater Sediment	MLSTRVKLTAAFVLALIAVTATLFLAVLTARNDAVYHDIAQYAAAQGDLAARIITDAVQSGDSVLATSDTALIQRLSPRVAARLQLVPGYIVIVDTTGREVY
Ga0222622_112775301	3300022756	Groundwater Sediment	MLSTRVQLTAAFVAGLVAVTVTLFLAVLASRNNAVYHDIALYAAAQGDLAARVITDAEQSGEKVMATKDTALIVSVTPEIADRLQSVPGFMVVVDTL
Ga0247692_10548771	3300024279	Soil	MISTRVTLTAAFVAGLVAVTVTLFLAVLAARNDAVYHDIALYAAAQGDLAARVITDAERSEGKVMATSDTALIALLSPNVVNRLQAL
Ga0209014_102388071	3300025857	Arctic Peat Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITEAEQSGEKVMATSDTALIALLSPRVVERLQSVPGFIVVVDTTGRAVYRSGD
Ga0207642_103291262	3300025899	Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVIAEAEQTGQRVVATSDTALIQSLSPKIVDRLQSI
Ga0207684_103388461	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAAKVITDAAQSGEKVVATADTALIQYLSPKIVDRLQAIPGYIVVVDTLGRAVYRSPDVMR
Ga0207662_105789301	3300025918	Switchgrass Rhizosphere	MFSTRVKLTAAFVAGLIAITITLFLAILAARSNAVYHDIAQYAAAQGDLAARVITDADQDGEAVMATSDTALIPLLTPRLANRLQSVPGYIVVV
Ga0207649_101270821	3300025920	Corn Rhizosphere	MFSTRVKLTAVFVAGLVAITITLFLAVLAARNNAVYHDIAQYAAAQGDLAAREITEASQSGERVMANGDTALVAVLAPRLVERLQSIPGYIVVVDTAGRAVYRSSDVMRLQGTDLQTLQS
Ga0207644_112992242	3300025931	Switchgrass Rhizosphere	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVIAEAEQTGQRVVATSDTALIQSLSPKIVDRLQ
Ga0207686_108021221	3300025934	Miscanthus Rhizosphere	MLSTRVKLTAAFVAGLIAVTIALFLAVLAERNNGVYNDIALYAASQGDLAARVITDAAQSGETVVATADTALIQSLAPSLVDRL
Ga0207674_100567336	3300026116	Corn Rhizosphere	MFSTRVKLTAVFVAGLVAITITLFLAVLAARNNAVYHDIAQYAAAQGDLAAREITEASQSGERVMANGDTALVAVLAPRL
Ga0209027_10340663	3300026300	Grasslands Soil	MLSTRVKLTAAFVAGLLAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDAAQSGGNVMASSDTALIPQLAPKIVDRLQS
Ga0209267_11209331	3300026331	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIAQYAATQGDLAARIITDAAQSGEKVVVPSDKALVASVSPKIAERLQSVPGYIVVVDTAGRAL
Ga0209267_12816082	3300026331	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVITDAAQSDEKIVATRDTALIQYLSTKIVDRLQVIPGYIVVVDTLGR
Ga0209806_12021901	3300026529	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNDAVYHDIAQYAAAQGDLAARVITDAAQSDEKIVATRDTALIQYLSTKIVDRLQVIPGYIVV
Ga0209161_101393341	3300026548	Soil	MLSTRVKLTAAFVAGLIAVTITLFLAVLAARNNAVYHDIAQYAATQGDLAARIITDAAQSGEKVVVPSDTALVASVSPKIAERLQSIPGYI
Ga0209217_100126013	3300027651	Forest Soil	VVSTRVKLTVAFVAGMIAVAITLFLAVLTARNNAVYHDIAQYAAAQGDLATRVITDAAQSGQKVLANGDTALIPVLSSKIVDRLQSVPGYIVV
Ga0208991_12056912	3300027681	Forest Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNNAVYHDIALYAAAQGDLAARVITDAVQSNEKVFVTSDTALIPRLSPK
Ga0209971_10394261	3300027682	Arabidopsis Thaliana Rhizosphere	MFSTRVKLTAAFLAGLITVTIILFLAVLAARSDAVYNDIAQYAAAQGELAAGVITDAAQAGENVFATSDTALIARLAPRVVSRLRTVPGYIVVVDTTGRAVYRSDDVLR
Ga0208989_102081352	3300027738	Forest Soil	VVSTRAKLTIAFVAGMIAVAITLFLAVLTARNNAVYHDIAQYAAAQGDLGARVINDAAQSGAKVLANGDTALIPLLAPKVVDRLQAVPGYIVVVDTAG
Ga0209073_100363011	3300027765	Agricultural Soil	MISTRVKLTAAFVVGLAAVTLTLFLALLAARNNAVYHDIAQYAAAQGDLVAHVIADAAQSGENVMATSDTAIVPLLSPKIVDRLQSIPGYIVVV
Ga0209177_101616632	3300027775	Agricultural Soil	MISTRVKLTAAFVVGLVTVTVTLFLALLAARSNAVYHDIAQYAAAQADLAAHVIVGAQQSGENVMATSDTALVPALSPRIIDRLQLIPGYIVVVDTAGR
Ga0209526_100413705	3300028047	Forest Soil	MLSMRVKLAAAFVAGLVAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVINDAAKSGEKGVATSDTALISLLSPKVVDRLPAVPGYIVVVD
Ga0307301_102487012	3300028719	Soil	MLSTRVKLTAAFVAGLIAVTATLVLAVLTARNNAVYHDIALYAAAQGDLAARVITDAAKSGDSVLATSDTALIQRLSPKVVSRLQSVPGYIVVVDTAGRAVYRSNDVMALQGSDMATLQS
Ga0307284_104574981	3300028799	Soil	VVSTRAKLTVAFVSGMIAVAITLFLAVLTARNNAVYHDIAQYAAAQGDLAARVITEAAQSGGKVLATGDTALIPLLAPKLVERLQSVPGY
Ga0307302_105834301	3300028814	Soil	MLSTRVKLTAAFVAGLITVTITLFLAVLAARNDAVYHDIAQYAAAQGELAARVITEAAQTGDSVMEAGDTALIARLAPKIVQRLQWVPGYLVVVDTAGRAVYRSDDVLRLQGHDMATL
Ga0307312_101859491	3300028828	Soil	MLSTRVKLTVAFVLGLIAVTATLFLAVLAARNNAVYHDIAQYAAAQGDLAARVIIDAAQSEESVFATSDTALIAQLSPKIVDRLQALPGYIVVVDTSG
Ga0307312_104032641	3300028828	Soil	MLSTRVKLTAAFVAGLVAVTVTLFLAVLAARNNAVYHDIAQYAAAQGDLAARVITDADQSGEKVMATSDTALIALLAPKVAERLQSVPGFIVVVDTIGRA
Ga0307312_111873572	3300028828	Soil	MLSMRVKLTAAFLAGLVAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVINDAAKSGEKVVATSDTALISLLSPKVVDRLQAVPGYIVVVDTAGRAVYRSSDVMRLDGND
Ga0307286_101697282	3300028876	Soil	MLSTRVKLTAAFVAGLIAVTATLVLAVLTARNNAVYHDIALYAAAQGDLAARVITDAAKSGDSVLATSDTALIQRLSPKVVSRLQSVPGYIVVVDT
Ga0307277_100808121	3300028881	Soil	MLSTRVKLTAAFVAGLIAVTATLVLAVLTARNNAVYHDIALYAAAQGDLAARVITDAAKSGDSVLATSDTALIQRLSPR
Ga0307308_103187422	3300028884	Soil	MLSMRVKLTAAFLAGLVAVTITLFLAVLAARNNAVYHDIAQYAAAQGDLAARVINDAAKSGEKVVATSDTALISLLSPKVVDRLQAVPGYIVVVDTAGRAVYRSSDVMRLDDNDMA
Ga0307304_101542391	3300028885	Soil	MLSTRAKLTAAFVAGLIAVTLTLFLGVLTARNNAVYHDIAQYAAAQGDLAARVIVDAAESGEKILVKSDTTFAPQLSPKLVQRLQVVPGYLVVVDS
Ga0307469_121727801	3300031720	Hardwood Forest Soil	MLSTRVKLTLAFVAGLLAITLTLFLGLLAARNNAVYHDIAQYAAAQGELAARVITDAQQRGEKIVATSDTALIQVMSPSVADRLQSVPGYIVIVDTLG
Ga0307416_1015130411	3300032002	Rhizosphere	MLSTRVKLTAAFLAGLATVTIILFLAVLAARSDAVYNDIAQYAAAQGELVAGVITDAARAGENVFATSDTALIASLNPR
Ga0307470_113799932	3300032174	Hardwood Forest Soil	MLSTRVKLTAAFVAGLVAVTITLFLAVLAARNDAVYHDIAQYAATQGDLAARVIAEAEQTGQRVVATSDTALIQSLSPKIVDRLQSIPGYIVVVDNRGRAVYRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072230

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences