Metagenome / Metatranscriptome Family F072510

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072510
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	105 residues
Representative Sequence	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK
Number of Associated Samples	102
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.50 %
% of genes near scaffold ends (potentially truncated)	23.97 %
% of genes from short scaffolds (< 2000 bps)	82.64 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.504 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.140 % of family members)
Environment Ontology (ENVO)	Unclassified (28.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.372 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.63% β-sheet: 0.00% Coil/Unstructured: 31.37%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13193	AMP-binding_C	4.13
PF10633	NPCBM_assoc	2.48
PF02585	PIG-L	1.65
PF04909	Amidohydro_2	1.65
PF13424	TPR_12	1.65
PF14280	DUF4365	1.65
PF13191	AAA_16	0.83
PF00078	RVT_1	0.83
PF14251	DUF4346	0.83
PF01909	NTP_transf_2	0.83
PF00005	ABC_tran	0.83
PF00528	BPD_transp_1	0.83
PF07592	DDE_Tnp_ISAZ013	0.83
PF13416	SBP_bac_8	0.83
PF02796	HTH_7	0.83
PF13751	DDE_Tnp_1_6	0.83
PF13358	DDE_3	0.83
PF02643	DUF192	0.83
PF04208	MtrA	0.83
PF02653	BPD_transp_2	0.83
PF07394	DUF1501	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.65
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.83
COG4063	Tetrahydromethanopterin S-methyltransferase, subunit A	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.50 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.50 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.50 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.48 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	5.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.31 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.48 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	2.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5.79 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2.48 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.48 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.48 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	5.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.48 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.65 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.65 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.83 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.48 %
Methylovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum	1.65 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.83 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.48 %
unclassified Methylovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → unclassified Methylovulum	1.65 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.65 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.48 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.65 %
Methylovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → unclassified Methylovulum → Methylovulum sp.	1.65 %
unclassified Aquisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.48 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.65 %
Methylovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → unclassified Methylovulum → Methylovulum sp.	1.65 %
Aquisphaera sp. JC669	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0435230	Not Available	645	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10708885	Not Available	594	Open in IMG/M
3300000787\|JGI11643J11755_11812669	Not Available	693	Open in IMG/M
3300000858\|JGI10213J12805_10009275	Not Available	519	Open in IMG/M
3300001431\|F14TB_100549116	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300004463\|Ga0063356_105062765	Not Available	566	Open in IMG/M
3300005174\|Ga0066680_10889571	Not Available	529	Open in IMG/M
3300005180\|Ga0066685_10939425	Not Available	575	Open in IMG/M
3300005294\|Ga0065705_10371828	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005332\|Ga0066388_100856435	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300005332\|Ga0066388_102964627	Not Available	867	Open in IMG/M
3300005332\|Ga0066388_107289615	Not Available	556	Open in IMG/M
3300005445\|Ga0070708_100137392	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300005451\|Ga0066681_10209417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	1169	Open in IMG/M
3300005457\|Ga0070662_100485244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300005468\|Ga0070707_100015841	All Organisms → cellular organisms → Bacteria	7078	Open in IMG/M
3300005552\|Ga0066701_10722008	Not Available	598	Open in IMG/M
3300005559\|Ga0066700_10518860	Not Available	831	Open in IMG/M
3300005576\|Ga0066708_10303124	Not Available	1023	Open in IMG/M
3300005719\|Ga0068861_101158969	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005981\|Ga0081538_10006219	All Organisms → cellular organisms → Bacteria	10565	Open in IMG/M
3300006049\|Ga0075417_10017748	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300006049\|Ga0075417_10170303	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1021	Open in IMG/M
3300006194\|Ga0075427_10038068	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300006196\|Ga0075422_10005971	All Organisms → cellular organisms → Bacteria	3836	Open in IMG/M
3300006844\|Ga0075428_100017547	All Organisms → cellular organisms → Bacteria → Proteobacteria	7907	Open in IMG/M
3300006844\|Ga0075428_102176027	Not Available	572	Open in IMG/M
3300006845\|Ga0075421_101245737	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006846\|Ga0075430_100201488	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300006846\|Ga0075430_101395963	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006847\|Ga0075431_100058867	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300006853\|Ga0075420_100045000	All Organisms → cellular organisms → Bacteria	3932	Open in IMG/M
3300006853\|Ga0075420_101136456	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006880\|Ga0075429_100984073	Not Available	737	Open in IMG/M
3300007255\|Ga0099791_10062090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1683	Open in IMG/M
3300007258\|Ga0099793_10048369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1867	Open in IMG/M
3300007265\|Ga0099794_10551937	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300009012\|Ga0066710_101926863	Not Available	883	Open in IMG/M
3300009038\|Ga0099829_11385941	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009038\|Ga0099829_11440349	Not Available	569	Open in IMG/M
3300009089\|Ga0099828_10898038	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300009090\|Ga0099827_10125482	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300009100\|Ga0075418_10015727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8365	Open in IMG/M
3300009137\|Ga0066709_102860743	Not Available	638	Open in IMG/M
3300009147\|Ga0114129_10670765	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300009444\|Ga0114945_10037472	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300009810\|Ga0105088_1094992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → unclassified Methylovulum → Methylovulum sp.	547	Open in IMG/M
3300009813\|Ga0105057_1048350	Not Available	696	Open in IMG/M
3300009823\|Ga0105078_1058059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → unclassified Methylovulum → Methylovulum sp.	527	Open in IMG/M
3300010043\|Ga0126380_10080307	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300010046\|Ga0126384_10099157	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300010047\|Ga0126382_11976004	Not Available	554	Open in IMG/M
3300010358\|Ga0126370_12196455	Not Available	544	Open in IMG/M
3300010359\|Ga0126376_11215518	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300010359\|Ga0126376_12938605	Not Available	526	Open in IMG/M
3300010360\|Ga0126372_11924988	Not Available	637	Open in IMG/M
3300010362\|Ga0126377_11865355	Not Available	677	Open in IMG/M
3300010366\|Ga0126379_10892352	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300010366\|Ga0126379_13418847	Not Available	532	Open in IMG/M
3300010397\|Ga0134124_12935670	Not Available	521	Open in IMG/M
3300010398\|Ga0126383_11911095	Not Available	681	Open in IMG/M
3300010398\|Ga0126383_13682519	Not Available	501	Open in IMG/M
3300012189\|Ga0137388_10341565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1379	Open in IMG/M
3300012199\|Ga0137383_10437178	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300012201\|Ga0137365_10874449	Not Available	656	Open in IMG/M
3300012204\|Ga0137374_10253306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1474	Open in IMG/M
3300012206\|Ga0137380_10179198	Not Available	1927	Open in IMG/M
3300012209\|Ga0137379_10588759	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1019	Open in IMG/M
3300012211\|Ga0137377_10626038	Not Available	1012	Open in IMG/M
3300012349\|Ga0137387_10295544	Not Available	1171	Open in IMG/M
3300012349\|Ga0137387_10634370	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012351\|Ga0137386_10937424	Not Available	619	Open in IMG/M
3300012354\|Ga0137366_10510983	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	867	Open in IMG/M
3300012356\|Ga0137371_11059101	Not Available	612	Open in IMG/M
3300012358\|Ga0137368_10022389	All Organisms → cellular organisms → Bacteria	5941	Open in IMG/M
3300012359\|Ga0137385_10537881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	986	Open in IMG/M
3300012362\|Ga0137361_10179256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1909	Open in IMG/M
3300012405\|Ga0134041_1047119	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012917\|Ga0137395_10130456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1703	Open in IMG/M
3300012929\|Ga0137404_10065150	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300012948\|Ga0126375_10504392	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300012948\|Ga0126375_10732689	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012971\|Ga0126369_10428541	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300013306\|Ga0163162_11659807	Not Available	729	Open in IMG/M
3300013306\|Ga0163162_12943054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300015371\|Ga0132258_11467990	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300015372\|Ga0132256_100898977	Not Available	1001	Open in IMG/M
3300015372\|Ga0132256_101043331	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300015374\|Ga0132255_103425531	Not Available	675	Open in IMG/M
3300018063\|Ga0184637_10013782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4858	Open in IMG/M
3300019249\|Ga0184648_1312965	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300021086\|Ga0179596_10289906	Not Available	815	Open in IMG/M
3300022563\|Ga0212128_10455963	Not Available	786	Open in IMG/M
3300025922\|Ga0207646_10019695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	6265	Open in IMG/M
3300025933\|Ga0207706_10842980	Not Available	777	Open in IMG/M
3300026118\|Ga0207675_101250955	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300027056\|Ga0209879_1042734	Not Available	742	Open in IMG/M
3300027068\|Ga0209898_1055595	Not Available	519	Open in IMG/M
3300027655\|Ga0209388_1076535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	964	Open in IMG/M
3300027846\|Ga0209180_10529994	Not Available	657	Open in IMG/M
3300027873\|Ga0209814_10017903	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300027873\|Ga0209814_10134874	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1056	Open in IMG/M
3300027874\|Ga0209465_10553795	Not Available	572	Open in IMG/M
3300027880\|Ga0209481_10140450	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1187	Open in IMG/M
3300027882\|Ga0209590_10086427	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300027907\|Ga0207428_10052655	All Organisms → cellular organisms → Bacteria	3250	Open in IMG/M
3300027907\|Ga0207428_10690223	Not Available	731	Open in IMG/M
3300027907\|Ga0207428_10717191	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300027909\|Ga0209382_10005633	All Organisms → cellular organisms → Bacteria	16280	Open in IMG/M
3300027909\|Ga0209382_10839223	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300028587\|Ga0247828_10374819	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300028592\|Ga0247822_10834828	Not Available	753	Open in IMG/M
3300031093\|Ga0308197_10007180	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300031547\|Ga0310887_10298633	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031562\|Ga0310886_10020710	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300031847\|Ga0310907_10099690	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300031908\|Ga0310900_10175476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1480	Open in IMG/M
3300034664\|Ga0314786_106116	Not Available	611	Open in IMG/M
3300034668\|Ga0314793_114146	Not Available	577	Open in IMG/M
3300034673\|Ga0314798_105075	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.07%
Host-Associated	Host-Associated	28.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.77%
Plants	Host-Associated → Plants	28.93%
Aquatic	Environmental → Aquatic	3.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.65%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.01%
Loam	Environmental → Terrestrial → Soil → Loam	6.61%
Sand	Environmental → Terrestrial → Soil → Sand	4.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.44%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.48%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.44%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_04352301	3300000033	Soil	MTKEQIITGLIDCLDHQLHSGMGHMQDKYYKGEFFXLXTEAXNHGFXADKSLXGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
ICChiseqgaiiFebDRAFT_107088851	3300000363	Soil	MGDERGGAIMTKEQIITGLIDCLDHQLHSGMGHMQDKYYKGEFFQLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKRKVKFLD*
JGI11643J11755_118126692	3300000787	Soil	MTKEQIITGLIDCLDHQLHSGMGHMQDKYYKGEFFQLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
JGI10213J12805_100092751	3300000858	Soil	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYRGEFFHLFTEAYNYGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWHYAWDHCHKKKF*
F14TB_1005491162	3300001431	Soil	MMTKEQIITGLIDCLEQQLHGGRGHTQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKRKVKFLD*
Ga0063356_1050627651	3300004463	Arabidopsis Thaliana Rhizosphere	MGEERGGAIMTKEQIITGLIDCLDHQLHSGMGHMQDKYYKGEFFQLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDIEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKC*
Ga0066680_108895711	3300005174	Soil	MMTKEQIITGIIDCLDRQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNFNS*
Ga0066685_109394251	3300005180	Soil	RDERGGAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0065705_103718282	3300005294	Switchgrass Rhizosphere	MMTKEQIITGIIDCLDHQLHGGTGHMQDKYYKGEFFHLFAEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0066388_1008564352	3300005332	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0066388_1029646272	3300005332	Tropical Forest Soil	MMTKEQIITGIIDCLDQQLHSGMGHMQDKYYKGEFFHLFAEAYNYGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLPNCWHEWQYAWDHCYKKKL*
Ga0066388_1072896151	3300005332	Tropical Forest Soil	TGIMGRDERGGAMMTKEQIITGIIDCLEHQLHSGMGHMQDKYYKGEFFHLFAEAYNYGFIADKSLTGSSLWDIIGERWIPSDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKC*
Ga0070708_1001373922	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGRDERGEAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0066681_102094173	3300005451	Soil	IDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0070662_1004852442	3300005457	Corn Rhizosphere	VGKSTCVGEIIRNLFWMGIGIMGRDERGGTMMTKEQIITGIIDCLDHQLHGGTGHMQDKYYKGEFFHLFAEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0070707_1000158419	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0066701_107220081	3300005552	Soil	MMTKEQIITGIIDCLDRQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCNKKKCNS*
Ga0066700_105188602	3300005559	Soil	MMTKEQIITGIIDCLDHQLHNGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCNKKKCNS*
Ga0066708_103031241	3300005576	Soil	AMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFAEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCNKKKCNS*
Ga0068861_1011589691	3300005719	Switchgrass Rhizosphere	MMTKEQIITGIIDCLDHQLHGGTGRMQDKYYKGEFFHLFAEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAW
Ga0081538_100062193	3300005981	Tabebuia Heterophylla Rhizosphere	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYRGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWHYAWDHCHKKKF*
Ga0075417_100177482	3300006049	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQGKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEQETAQIKLLYDLLNCWHEWQYAWDHCHKKKC*
Ga0075417_101703032	3300006049	Populus Rhizosphere	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIVGERWIPPDIEKEIAQIKLLYDLLNCWHEWQYAWDHCHKKKV*
Ga0075427_100380682	3300006194	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDTIGARWIPPDIEQETAQIKLLYNLLNCWHEWQYAWDHC
Ga0075422_100059712	3300006196	Populus Rhizosphere	MMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0075428_1000175477	3300006844	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDTIGARWIPPDIEQETAQIKLLYDLLNCWHEWQYAWDHCHKKKC*
Ga0075428_1021760271	3300006844	Populus Rhizosphere	MMTKEQIIAAIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0075421_1012457372	3300006845	Populus Rhizosphere	MMTKEQIITDLIDCLEQQLHSGMGRMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPAMEQETAQIKLLYDLLHCWQEWHYAWDHCHKKKC*
Ga0075430_1002014881	3300006846	Populus Rhizosphere	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIVGERWIPPDIEKEIAQIKLLYDLLNCWHEWQYAWDHC
Ga0075430_1013959631	3300006846	Populus Rhizosphere	MMTKEQIITDLIDCLEQQLHSGMGRMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPAMEQETAQIKLLYDLL
Ga0075431_1000588674	3300006847	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDTIGARWIPPDIEQETAQIKLLYNLLNCWHEWQYAWDHCHKKKC*
Ga0075420_1000450001	3300006853	Populus Rhizosphere	GIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0075420_1011364562	3300006853	Populus Rhizosphere	MMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0075429_1009840731	3300006880	Populus Rhizosphere	IAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0099791_100620903	3300007255	Vadose Zone Soil	MMTKEQIITGIIDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0099793_100483694	3300007258	Vadose Zone Soil	CLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0099794_105519371	3300007265	Vadose Zone Soil	MGRDERGGAMMTKEQIITGIIDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0066710_1019268631	3300009012	Grasslands Soil	AMMTKEQIITGIIDCLDRQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTVSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK
Ga0099829_113859412	3300009038	Vadose Zone Soil	GQDERGKAMMTKEQIITSIIDCLDHQLHGGLGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKEIAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0099829_114403492	3300009038	Vadose Zone Soil	MGRDERGEAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0099828_108980382	3300009089	Vadose Zone Soil	MIKALFWIGIGIMGQDERGGVMMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKEIAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0099827_101254824	3300009090	Vadose Zone Soil	MIKALFWIGIGIMGQDERGGVMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNYGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0075418_100157272	3300009100	Populus Rhizosphere	MGREERGEAMMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0066709_1028607431	3300009137	Grasslands Soil	MGQDERGGAMMTKEQIITGIIDCLDCQLHGGMGHMQDEYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0114129_106707652	3300009147	Populus Rhizosphere	MGREERGEAMMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0114945_100374722	3300009444	Thermal Springs	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFG*
Ga0105088_10949922	3300009810	Groundwater Sand	GAMMTKEQIIAGLIDCLEQRLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNF*
Ga0105057_10483502	3300009813	Groundwater Sand	MGRDERGEAMMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFG*
Ga0105078_10580592	3300009823	Groundwater Sand	AMMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNF*
Ga0126380_100803071	3300010043	Tropical Forest Soil	MTKEQIITGIIDCLEQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEQETAQIKLLYNLLNCWHEWQYAWDHCYKKKL*
Ga0126384_100991572	3300010046	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGMGHKQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0126382_119760041	3300010047	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEQETAQIKLLYDLLNCWHEWQYAWDHCHKKKC*
Ga0126370_121964551	3300010358	Tropical Forest Soil	MGRDERGGAMMTKEQIITGIIDCLEHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLHCWHEWQYAWD
Ga0126376_112155182	3300010359	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLNCWHEWQYAWDHCHKKKC*
Ga0126376_129386051	3300010359	Tropical Forest Soil	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYFKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFN*
Ga0126372_119249881	3300010360	Tropical Forest Soil	DERGGAMMTKEQIITGIIACLDQQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIVGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFFS*
Ga0126377_118653551	3300010362	Tropical Forest Soil	EQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLHCWHEWQYAWDHCYKKKL*
Ga0126379_108923522	3300010366	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGIGHMQNKYYKGEFFHLFTEAYNHGFIADRSLTGSSLWDIIGERWIPPDIEQETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0126379_134188471	3300010366	Tropical Forest Soil	MMTKEQIITGIIDCLDHQLHGGMRHMQDKYYKSEFFHLFTEAYNHGFIADQSLTGSSLWDIIGERWIPPAMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0134124_129356701	3300010397	Terrestrial Soil	MGQEGRGGAMMTKEQIITGIIDYLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFH
Ga0126383_119110951	3300010398	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGMGHKQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDILGERWIPPDIEQETAQIKLLYDLLTCWHEWQYAWDHCHKKKC*
Ga0126383_136825191	3300010398	Tropical Forest Soil	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKDEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNLCSATQVMLLL*
Ga0137388_103415652	3300012189	Vadose Zone Soil	MGQDERGKAMMTKEQIITSIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0137383_104371782	3300012199	Vadose Zone Soil	MGRDERGGAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0137365_108744491	3300012201	Vadose Zone Soil	MGRDERGEAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNFNS*
Ga0137374_102533062	3300012204	Vadose Zone Soil	MGIGIMGRDERGEAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHE*
Ga0137380_101791983	3300012206	Vadose Zone Soil	LLKHTLTGIIDCLDCQLHGGMGHMQDEYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0137379_105887593	3300012209	Vadose Zone Soil	MGRDERGGAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNFNS*
Ga0137377_106260381	3300012211	Vadose Zone Soil	MDIGIMGRDQRGGAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKDEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWHYAWDHCHKKNFNS*
Ga0137387_102955441	3300012349	Vadose Zone Soil	QDERGGAMMTKEQIITGIIDCLDHQLHGGMGHMQDEYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0137387_106343701	3300012349	Vadose Zone Soil	QDERGGAMMTKEQIITGIIDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0137386_109374241	3300012351	Vadose Zone Soil	MGRDERGEAMMTKEQIITGIIDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0137366_105109832	3300012354	Vadose Zone Soil	MGRDERGEAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHE*
Ga0137371_110591012	3300012356	Vadose Zone Soil	MGQDERGGAMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWHYAWDHCHKKNFNS*
Ga0137368_100223892	3300012358	Vadose Zone Soil	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0137385_105378812	3300012359	Vadose Zone Soil	MMTKEQIITGIIDCLDCQLHGGMGHMQDEYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK*
Ga0137361_101792563	3300012362	Vadose Zone Soil	MMTKEQIITGIIDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0134041_10471191	3300012405	Grasslands Soil	IDCLDCQLHGGMGHMQDEYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCNKKKCNS*
Ga0137395_101304562	3300012917	Vadose Zone Soil	MGQDERGKAMMTKEQIITSIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL*
Ga0137404_100651501	3300012929	Vadose Zone Soil	MMTKEQIITGIVDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF*
Ga0126375_105043923	3300012948	Tropical Forest Soil	MMTKEQIITGIIDCLDHQLHGGMRHMQDKYYKGEFFHLFTEAYNHGFIADQSLTGSTLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKIFS*
Ga0126375_107326892	3300012948	Tropical Forest Soil	MMTKEQIITGIIDCLEQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLHCWHEWQYAWDHCYKKKM*
Ga0126369_104285412	3300012971	Tropical Forest Soil	MMTKEQIITGLIDCLEQQLHSGIGHMQNKYYKGEFFHLFTEAYNHGFIADRSLTGSSLWDIIGERWIPPDIEQETAQIKLLYDLLNCWHEWQYAWDHYHKKSGM*
Ga0126369_123297311	3300012971	Tropical Forest Soil	HGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPSDMEQETAQIKLLYDLLHCWHEWQYAWDHCYKKKL*
Ga0163162_116598072	3300013306	Switchgrass Rhizosphere	MGEERGGAIMTKEQIITGLIDCLDHQLHSSMGHMQDKYYKGEFFQLFTEAYNHGFIADKSLIGSSLWDIIGERWIPPDIEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0163162_129430541	3300013306	Switchgrass Rhizosphere	MGIGIMGRDERGGTMMTKEQIITGIIDCLDHQLHGGTGHMQDKYYKGEFFHLFAEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNC
Ga0132258_114679902	3300015371	Arabidopsis Rhizosphere	MMMKEQIITGLIDCLEQQLHSGMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGARWIPPDIEQETAQIKLLYDLLNCWQEWQYAWDHCHKKKC*
Ga0132256_1008989772	3300015372	Arabidopsis Rhizosphere	EERGEAMMTKEQIIAGIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF*
Ga0132256_1010433311	3300015372	Arabidopsis Rhizosphere	MGREERGEAMMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGARWIPPDIEQETAQIKLLYDLLNCWQEWQYAWDHCHKKKC*
Ga0132255_1034255312	3300015374	Arabidopsis Rhizosphere	MGREERGEAMMTKEQIIAGIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKNF*
Ga0184637_100137825	3300018063	Groundwater Sediment	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFSEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFG
Ga0184648_13129652	3300019249	Groundwater Sediment	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKNF
Ga0179596_102899062	3300021086	Vadose Zone Soil	DERGKAMMTKEQIITSIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL
Ga0212128_104559631	3300022563	Thermal Springs	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKFG
Ga0207646_100196951	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKK
Ga0207706_108429801	3300025933	Corn Rhizosphere	MMTKEQIITGIIDCLDHQLHGGTGHMQDKYYKGEFFHLFAEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCYKKKL
Ga0207675_1012509552	3300026118	Switchgrass Rhizosphere	MMTKEQIITGIIDCLDHQLHGGTGRMQDKYYKGEFFHLFAEAYNHGFIADKSLIGSSLWDIIGERWIPPDMEKETAQIKLLYDLL
Ga0209879_10427341	3300027056	Groundwater Sand	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNF
Ga0209898_10555952	3300027068	Groundwater Sand	MGRDERGEAMMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKNF
Ga0209388_10765351	3300027655	Vadose Zone Soil	MMTKEQIITGIIDCLDHQLHGGMGQMQDKYYKGEFFHLFTEAYNHGFIVDKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF
Ga0209180_105299942	3300027846	Vadose Zone Soil	MMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF
Ga0209814_100179032	3300027873	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQEKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0209814_101348742	3300027873	Populus Rhizosphere	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIVGERWIPPDIEKEIAQIKLLYDLLNCWHEWQYAWDHCHKKKV
Ga0209465_105537951	3300027874	Tropical Forest Soil	MTKEQIITGLIDCLEQQLHSGIGHMQNKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIIGERWIPSDMEQETAQIKLLYDLLNCWHEWQYAWDHCHKKKC
Ga0209481_101404502	3300027880	Populus Rhizosphere	MMTKEQIITGIIDCLDQQLHGGLGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0209590_100864275	3300027882	Vadose Zone Soil	MIKALFWIGIGIMGQDERGGVMMTKEQIITGIIDCLDHQLHGGMGHMQDKYYKGEFFHLFTEAYNYGFIADKSLTGSSLWDIIGERWIPPDMEKETVQIKLLYDLLNCWHEWQYAWDHCHKKKF
Ga0207428_100526552	3300027907	Populus Rhizosphere	MMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0207428_106902232	3300027907	Populus Rhizosphere	MMTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLIGSSLWDIVGERWIPPDIEKEIAQIKLLYDLLNCWHEWQYAWDHCHKKKC
Ga0207428_107171912	3300027907	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDTIGARWIPPDIEQETAQIKLLYDLLNCWHEWQYAWDHCHKKKC
Ga0209382_100056335	3300027909	Populus Rhizosphere	MMTKEQIIAGLIDCLEQQLHSSMGHMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDTIGARWIPPDIEQETAQIKLLYNLLNCWHEWQYAWDHCHKKKC
Ga0209382_108392232	3300027909	Populus Rhizosphere	MMTKEQIITDLIDCLEQQLHSGMGRMQEKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPAMEQETAQIKLLYDLLHCWQEWHYAWDHCHKKKC
Ga0247828_103748191	3300028587	Soil	MMKKEQIIAAIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLN
Ga0247822_108348281	3300028592	Soil	IMGWEERGEAMMTKEQIIAAIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0308197_100071802	3300031093	Soil	VTKEQIITGIIDCLDHQLHSGMGHMQDKYYKGEFFHLFTEAYNHGFIADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYDLLNCWHEWQYAWDHCHKKKF
Ga0310887_102986331	3300031547	Soil	MMTKEQIIAGIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0310886_100207102	3300031562	Soil	MMTKEQIIAGIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0310907_100996901	3300031847	Soil	MMTKEQIIAAIIDCLDHLLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYA
Ga0310900_101754761	3300031908	Soil	MMTKEQIIAAIIDCLDHQLCSAMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0314786_106116_271_582	3300034664	Soil	MMTKEQIIAAIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETAQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0314793_114146_260_571	3300034668	Soil	MMTKEQIIAGIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMVDKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF
Ga0314798_105075_236_574	3300034673	Soil	MGREERGEAMMTKEQIIAGIIDCLDHQLCSGMGHMQDKYYKGEFFHLFTEAYNHGFMADKSLTGSSLWDIIGERWIPPDMEKETTQIKLLYELLNCWHEWQYAWDHCHKKKF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072510

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences