Metagenome Family F072582

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072582
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	97 residues
Representative Sequence	QLGRESTSVSYGFKGTAVEDIKKIALEYRNAVALKADVAQVEMKQNLLDYHLAQDSFNDYLQYACPVDLARKDAEVCRTHPQYFTWPSDRFFIHYRPQ
Number of Associated Samples	103
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	97.52 %
% of genes from short scaffolds (< 2000 bps)	97.52 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.851 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.529 % of family members)
Environment Ontology (ENVO)	Unclassified (32.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.75% β-sheet: 4.76% Coil/Unstructured: 63.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03781	FGE-sulfatase	29.75
PF14707	Sulfatase_C	2.48
PF00884	Sulfatase	1.65
PF00999	Na_H_Exchanger	1.65
PF13620	CarboxypepD_reg	0.83
PF12710	HAD	0.83
PF14023	DUF4239	0.83
PF00583	Acetyltransf_1	0.83
PF06202	GDE_C	0.83
PF11104	PilM_2	0.83
PF11453	DUF2950	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	29.75
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.65
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.65
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.65
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.65
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.65
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.85 %
Unclassified	root	N/A	42.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.85 %
Unclassified	root	N/A	42.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.85 %
Unclassified	root	N/A	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Angulomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium	3.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Angulomicrobium tetraedrale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	3.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Angulomicrobium tetraedrale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	3.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.83 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Angulomicrobium tetraedrale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	3.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.83 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01EAQ65	Not Available	507	Open in IMG/M
2199352024\|deeps__Contig_159866	Not Available	501	Open in IMG/M
2228664022\|INPgaii200_c0415889	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101747840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2590	Open in IMG/M
3300004091\|Ga0062387_101617177	Not Available	523	Open in IMG/M
3300004092\|Ga0062389_104075663	Not Available	549	Open in IMG/M
3300004114\|Ga0062593_101980103	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300004633\|Ga0066395_10530520	Not Available	682	Open in IMG/M
3300004633\|Ga0066395_10825597	Not Available	558	Open in IMG/M
3300005295\|Ga0065707_10482114	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300005332\|Ga0066388_100877866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300005332\|Ga0066388_102359487	Not Available	964	Open in IMG/M
3300005332\|Ga0066388_103828996	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005332\|Ga0066388_108626599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	507	Open in IMG/M
3300005435\|Ga0070714_101231499	Not Available	730	Open in IMG/M
3300005437\|Ga0070710_10643944	Not Available	742	Open in IMG/M
3300005518\|Ga0070699_100127128	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300005544\|Ga0070686_100667359	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300005574\|Ga0066694_10166625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300005577\|Ga0068857_101352149	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005614\|Ga0068856_100927476	Not Available	889	Open in IMG/M
3300005614\|Ga0068856_102344819	Not Available	541	Open in IMG/M
3300005617\|Ga0068859_101000947	Not Available	918	Open in IMG/M
3300005764\|Ga0066903_104722201	Not Available	725	Open in IMG/M
3300005764\|Ga0066903_107288598	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005764\|Ga0066903_108290407	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006175\|Ga0070712_101516583	Not Available	586	Open in IMG/M
3300006237\|Ga0097621_100384594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300006237\|Ga0097621_100562852	Not Available	1039	Open in IMG/M
3300006806\|Ga0079220_10972949	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006844\|Ga0075428_101760365	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300006854\|Ga0075425_100796724	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300006904\|Ga0075424_102196489	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009012\|Ga0066710_103449885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	599	Open in IMG/M
3300009162\|Ga0075423_13195294	Not Available	502	Open in IMG/M
3300009176\|Ga0105242_11605619	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300009177\|Ga0105248_11784802	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300009545\|Ga0105237_11851190	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009553\|Ga0105249_11367182	Not Available	780	Open in IMG/M
3300009792\|Ga0126374_10744552	Not Available	742	Open in IMG/M
3300010043\|Ga0126380_12272252	Not Available	503	Open in IMG/M
3300010046\|Ga0126384_11303025	Not Available	674	Open in IMG/M
3300010047\|Ga0126382_10361799	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300010047\|Ga0126382_12013018	Not Available	550	Open in IMG/M
3300010048\|Ga0126373_11031964	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010048\|Ga0126373_13099853	Not Available	518	Open in IMG/M
3300010360\|Ga0126372_12760477	Not Available	543	Open in IMG/M
3300010361\|Ga0126378_10363634	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300010361\|Ga0126378_12280508	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010366\|Ga0126379_10536277	Not Available	1248	Open in IMG/M
3300010398\|Ga0126383_12497296	Not Available	601	Open in IMG/M
3300010398\|Ga0126383_13308623	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010399\|Ga0134127_11875395	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300010401\|Ga0134121_11525429	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300011434\|Ga0137464_1185718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	633	Open in IMG/M
3300011442\|Ga0137437_1229378	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300012202\|Ga0137363_11586473	Not Available	546	Open in IMG/M
3300012212\|Ga0150985_108398738	Not Available	985	Open in IMG/M
3300012212\|Ga0150985_114888156	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012469\|Ga0150984_114499938	Not Available	514	Open in IMG/M
3300012960\|Ga0164301_11624069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	537	Open in IMG/M
3300012971\|Ga0126369_10635750	Not Available	1140	Open in IMG/M
3300012971\|Ga0126369_11174518	Not Available	857	Open in IMG/M
3300012989\|Ga0164305_10544901	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300013306\|Ga0163162_12207325	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300014166\|Ga0134079_10452683	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300014325\|Ga0163163_12983701	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300014968\|Ga0157379_12104478	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300015371\|Ga0132258_11254582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1873	Open in IMG/M
3300016357\|Ga0182032_11850492	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300016387\|Ga0182040_11730046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	534	Open in IMG/M
3300017943\|Ga0187819_10685906	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300017955\|Ga0187817_10472054	Not Available	800	Open in IMG/M
3300018433\|Ga0066667_10071439	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300020579\|Ga0210407_10542093	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300020580\|Ga0210403_10413827	All Organisms → cellular organisms → Bacteria → Acidobacteria	1100	Open in IMG/M
3300020581\|Ga0210399_11591637	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300020583\|Ga0210401_11087033	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300021168\|Ga0210406_11364517	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300021170\|Ga0210400_10508204	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300021181\|Ga0210388_11371043	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300021401\|Ga0210393_10563236	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300021401\|Ga0210393_11533006	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300021478\|Ga0210402_11365529	Not Available	636	Open in IMG/M
3300021560\|Ga0126371_11354819	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300021560\|Ga0126371_12411858	Not Available	636	Open in IMG/M
3300021560\|Ga0126371_13019303	Not Available	570	Open in IMG/M
3300021560\|Ga0126371_13206550	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300025903\|Ga0207680_11000583	Not Available	599	Open in IMG/M
3300025911\|Ga0207654_10268926	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300025915\|Ga0207693_10907405	Not Available	676	Open in IMG/M
3300025916\|Ga0207663_10594876	Not Available	869	Open in IMG/M
3300025929\|Ga0207664_10903776	Not Available	793	Open in IMG/M
3300025945\|Ga0207679_12120626	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027829\|Ga0209773_10333414	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027874\|Ga0209465_10461021	Not Available	635	Open in IMG/M
3300031247\|Ga0265340_10272153	Not Available	753	Open in IMG/M
3300031474\|Ga0170818_110480667	Not Available	668	Open in IMG/M
3300031538\|Ga0310888_11049827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Angulomicrobium → Angulomicrobium tetraedrale	514	Open in IMG/M
3300031712\|Ga0265342_10441466	Not Available	669	Open in IMG/M
3300031716\|Ga0310813_11556337	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031720\|Ga0307469_12361641	Not Available	519	Open in IMG/M
3300031751\|Ga0318494_10680103	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031770\|Ga0318521_10205761	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300031890\|Ga0306925_11537833	Not Available	650	Open in IMG/M
3300031910\|Ga0306923_12387664	Not Available	525	Open in IMG/M
3300031942\|Ga0310916_10309304	Not Available	1339	Open in IMG/M
3300031945\|Ga0310913_10807630	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031959\|Ga0318530_10298081	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300032044\|Ga0318558_10365835	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300032055\|Ga0318575_10266550	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300032066\|Ga0318514_10655049	Not Available	559	Open in IMG/M
3300032091\|Ga0318577_10623645	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300032094\|Ga0318540_10333372	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300032179\|Ga0310889_10621629	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032261\|Ga0306920_103233306	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300032783\|Ga0335079_10739745	Not Available	1024	Open in IMG/M
3300032828\|Ga0335080_11682079	Not Available	623	Open in IMG/M
3300032955\|Ga0335076_11100623	Not Available	677	Open in IMG/M
3300033004\|Ga0335084_11329612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	715	Open in IMG/M
3300034090\|Ga0326723_0610102	Not Available	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.51%
Host-Associated	Host-Associated	21.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.73%
Plants	Host-Associated → Plants	21.49%
Aquatic	Environmental → Aquatic	5.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.61%
Freshwater	Environmental → Aquatic → Freshwater	4.13%
Roots	Host-Associated → Plants → Roots	2.48%
Sediment	Environmental → Aquatic → Sediment	1.65%
Peat	Environmental → Terrestrial → Peat	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.72%
Loam	Environmental → Terrestrial → Soil → Loam	14.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_08695850	2170459010	Grass Soil	SEDANLPVEFRVMQLGKEGTTVSYGFKGTAVEDVKKLALEYRNAVALKTDVAQIEMRQSLLDYRLAQDSFNDYLRYACPVDLARKDAEACRTHPQYFIWPSDRFFIHYRPQ
deeps_02942280	2199352024	Soil	NPSLAVEFRVMQLGAESTIVSYGFKNAAVQEVQKVALQYRTAVALKADVAQIEMRQNLLDYHLAQDSFNDYLQYACPVDLARKDAEVCRTHPQYFTWPSDRFFIHYRPQ
INPgaii200_04158891	2228664022	Soil	SSTVYREDPRLTFEFRILQSGEEDTIVSYGFKRSALAEIRNLAMEYRSAVALKADVAPIELKQNLLDYHLAQDSFNDYLRHVCPGDPSGDDTGVCRTHPQYFTWPSDRFFIHYRPQ
INPhiseqgaiiFebDRAFT_1017478401	3300000364	Soil	MFPSHDDFGAAGLLSSTVYREDPRLTFEFRILQSGEEDTIVSYGFKRSALAEIRNLAMEYRSAVALKADVAPIELKQNLLDYHLAQDSFNDYLRHVCPGDPSGDDTGVCRTHPQYFTWPSDRFFIHYRPQ*
Ga0062387_1016171771	3300004091	Bog Forest Soil	QLGKEITTVSYGFKGTAVDDIKKVALENRNAVALKADVAQIEMRQNILDYHLAQDSFNDYLQFACPVDLARKDGEVCQTHPQYFIWPSERSFIHYRPQ*
Ga0062389_1040756631	3300004092	Bog Forest Soil	SLSVEFRVMQLGKEITTVSYGFKGTAVDDIKKVALENRNAVALKADVAQIEMRQNILDYHLAQDSFNDYLQFACPVDLARKDGEVCQTHPQYFIWPSERSFIHYRPQ*
Ga0062593_1019801032	3300004114	Soil	SIVSYGFKGPTLKAIKESALEYRTAIARNADMAQIEARQNRFNYQLAQASFNEYLQYACPVDLARKDAEICTTHPQYFIWPSDRFFIHYRPQ*
Ga0066395_105305202	3300004633	Tropical Forest Soil	KGTAAQEIKKVALAYRSASPQTDLPTEAERDRLDIHLAQECFSDYLQYACPVDLSRKDAEVCRTHPQYFLWPSERFFIHYRPQ*
Ga0066395_108255971	3300004633	Tropical Forest Soil	RSAVNQSDVAAIELERDRLDLHLAQECFNDYLQYACPVDLGRKDPEVCRTHPQYFLWPSDRFFIHNRPQ*
Ga0065707_104821142	3300005295	Switchgrass Rhizosphere	ALKDIKTVALEFRNATARKADVSEIEKRQSLLDYHLAQDSFNDYLQYVCPVDLGRNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0066388_1008778661	3300005332	Tropical Forest Soil	QLGGKNSVVSYGFRGTALEEIRKIAQEYQTAVAGNSDPARIETSQSILDYHLDRESFNDYLQYACPVDLARPGAEECQTHPQYFLWPSDRFFIHARPQ*
Ga0066388_1023594871	3300005332	Tropical Forest Soil	GAALEEIKKVALEYRNAAVRKEDVAPIEVRQGILDYHLAQDSFNDYLQYACPADLARKNAEICRTHPQYFLWPSNRFFIHYRPQ*
Ga0066388_1038289962	3300005332	Tropical Forest Soil	FRIMQLGQESAVVSYGFKGTAIDDIKKVALEYRDATAHQADVAPIEMRQGLLDYHLAQDAFNQYLQYACPVDLARKDAEVCRTHPEYFLWPSDRFFIHYRPQ*
Ga0066388_1086265992	3300005332	Tropical Forest Soil	FKGTALEDIKKAALEYRNAIVREADVAQIEMRQNLLDHHLAQDSFSDYLQYACPVDLARKDAEICRTHPQYFIWPSDRFFIHYRPE*
Ga0070714_1012314991	3300005435	Agricultural Soil	AVDFRVVQLGKADDTIVSYGFEGTARAEIQKLALEYRSAVAVKADVAGIELRRGLLDSRLANESFNEYLEFACPVDLARRDAEVCRTHPQYFIWPSERFFVHNRPR*
Ga0070710_106439442	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VEEIKEIASEYRSAMARQADVAQIEERQNLLDYRLARESFTEYLQYACPVDLARKDAEVCKTHPQYFLWPSDRFFVHYRPQ*
Ga0070699_1001271283	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PSLGVEFRVMQLGKESTSVSYGFKGTAVEDIRRAALEYRNAVALKADVALIEMRQSLLDYHLARESFNDYLQYACAVDLARKDAEVCKTHPQYFIWPSDRFFIHYRPQ*
Ga0070686_1006673591	3300005544	Switchgrass Rhizosphere	RENPSLAVEFRVVQLGEERTSVSYGFKGTALKDIKTVALEYRDATAREADVSEIEKRQSLLDYRLAQDSFNDYLQYACPVDLARNDSEVCRTHPQYFIWPSDRFFIHYRPE*
Ga0066694_101666251	3300005574	Soil	ALKDIKKVALEYRNATARKADVAEIEKRQSLLDYHLAQDSFNDYLQYACPVDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0068857_1013521492	3300005577	Corn Rhizosphere	DLRKIAREYRDALALHADVAQIERKQSLLDYHLAQESFNDYLQYACPVDLSRRDAEICRTHPQYFTWPSERFFIHYRPQ*
Ga0068856_1009274762	3300005614	Corn Rhizosphere	GFKGSALADIQRLAVAYRGAAAVDAAVAGIERRRDLLEARLADESFIDYLQHACPVDLSRDDAEVCKTHPRYFIWPSDRFFIHDRP*
Ga0068856_1023448192	3300005614	Corn Rhizosphere	GFKGSALADIQRLAVAYRGAAAVDAAVAGIERRRDLLEAQLADESFIEYLQHACPVDLARDDAEVCKTHPRYFIWPSDRFFVHDRP*
Ga0068859_1010009471	3300005617	Switchgrass Rhizosphere	TAEFRIIQPGKEGTIVSYGFKGSALEEIRNLALEYRSVVALKADVAPIEMKQSLLDYHLAQDSYHEYLQYACPLDLTPKDRVACSTHPQYFTWPSDRFFIHHRPQ*
Ga0066903_1047222012	3300005764	Tropical Forest Soil	EEIKKVALEYRSASPQTDLPTEAERDRLDIHLAQECFSDYLQYACPVDLSRKDAEVCRTHPQYFLWPSERFFIHYRPQ*
Ga0066903_1072885981	3300005764	Tropical Forest Soil	AVEFRVMQIGQESTTVSYGFKGTAMEEIRQIALEYHDALVLQADVGPIEMKQKLLDYHLTQDSFNDYLQYACPVDLARKDAEVCRTHPQNFLWPSDRFFVHYRPQ*
Ga0066903_1082904071	3300005764	Tropical Forest Soil	PGKENSSVSYGFKGPAIEDIRKIASEYRKAVAAGADPAPIELRQKLLDYHLAQDSFHDYLQYACPVDLDRRDPEVCRTHPQYFIWPSGRFFLRYRAE*
Ga0070712_1015165831	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGLFSFMVYRENPSLAVEFRVMQLGAERTIVSYGFKGTAVDDIKKIALEYRQAVASKADVAQIEMRQGLLDYHLAQDSFNDYLQHACPVDLDRKDAEVCRTHPQYFIWPSDRFFIHHRPQ
Ga0097621_1003845942	3300006237	Miscanthus Rhizosphere	IIQPGEEGTIVSYGFKGSALEDIRNLAREYRSATALKADVAPLEMKQNLLDYHLAQDSYHEYLQYACPLDFTPKDRVVCRTHPQYFTWPSDRFFIHYRPQ*
Ga0097621_1005628522	3300006237	Miscanthus Rhizosphere	FRVMQLGAESTIVSYGFKEAAVQEVQKVALEYRNAVALKADVAQIEMRQNLLDYHLAQDSFNDYLQYACPVDLARKDAEVCRTHPKYFTWPSDRFFIHYRPQ*
Ga0079220_109729492	3300006806	Agricultural Soil	VSYGFKGIALEEIRNMALEYRSAVAVKADVAPIERRLNLIDDHLAQDSFNEYLRHVCPADPARKDATVCGTHPQYFTWPSDRFFIHYRPK*
Ga0075428_1017603652	3300006844	Populus Rhizosphere	GKERTIVSYGFKGTALKDIKKVALEYRNATARKADVSEIEKRQSLLDYHLAQDSFNDYLQYACPVDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0075425_1007967241	3300006854	Populus Rhizosphere	GFKGAAMQEIRQIALEYRKALGLQADVGPIEMKQKLLDYHLAQDSFSDYLQYACPVDLSRKDAEVCRTHPKNFLWPSDRFFVHYRPQ*
Ga0075424_1021964892	3300006904	Populus Rhizosphere	ENPSLSIEFRVMQLSEGSTIVSYGFKGPALKAIKESALEYRTAIARNADMAQIEAQQNRFNYQLAQASFNEYLQYACPVDLARKDAEICTTHPQYFIWPSDRFFIHYRPQ*
Ga0066710_1034498852	3300009012	Grasslands Soil	FKGTALKDIKKVALEYRNATARKADVSEIEKRQSLLDYHLAQDSFNDYLQHACPVDLARNEAEVCRTHPQYFIWPSDRFFIHYRPQ
Ga0075423_131952942	3300009162	Populus Rhizosphere	LAVEFRVVQLGEERTIVSYGFKGTALEEIKKVALESGNASARKADLAQIEMRQKLLDSYLARESFNDYLQYACPVDLDRKDAEGCRTHPQYFIWPSDRFFIHYRPQ*
Ga0105242_116056191	3300009176	Miscanthus Rhizosphere	KGNALAEIRNVAQEYRSAAALKGDVAPIEMKQHLIDYHLAQDSYNDYLRHVCPADPARQDPQVCTTHPQYFTWPSDRFFIHYRPR*
Ga0105248_117848021	3300009177	Switchgrass Rhizosphere	EDIRNAALEYRNAVAVQADVAPIEMRQNLLDYHLAQDSFNDYLQYACPVDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0105237_118511902	3300009545	Corn Rhizosphere	RFRVEFRILQSGKEDTIVSYGFKGSALAEIRDLAQEYRSAAALKADVAPIEMKQHLIDYHLAQDSYNDYLRHVCPADPARQDPQVCTTHPQYFTWPSDRFFIRYRPR*
Ga0105249_113671822	3300009553	Switchgrass Rhizosphere	AIQEIKKVALEYRNAVALKADVAPIEKKQGILNYQLAQDSFNDYLQYACPVDLAREDADVCKTHPQNFIWPSDRFFLHYRPQ*
Ga0126374_107445521	3300009792	Tropical Forest Soil	FSFLVYRERPQLPVEFRVVQVTDESTVVSYGFKGTALEAIRKNAQEHRTASDRKADTAPIEIRQSILNYHLAQESFAGYLQYACPVDLTRADAEVCKTHPQYFLWPSDRFFIH*
Ga0126380_122722521	3300010043	Tropical Forest Soil	STIVSHGFKGTALDEIKKAALEYRNAAARKEDVPQIETRQPLLDDHLAQDSFNEYLQYACPVDLTRSDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0126384_113030252	3300010046	Tropical Forest Soil	VVSYGFKEPVVEDIKKLASEYRDAAARHGATASIELKQNLLDYHLAQDAFNQYLQYVCPVDLTRKDAEVCRTHPEYFIWPSDRFFVHYRPQQPGFPGRVDASGQ*
Ga0126382_103617991	3300010047	Tropical Forest Soil	STIVAYGPKGSAVEEIRKLASEYRNAASLHADVAQIEMKQKILDYHLAQESFNDFLQYACPVDFTRKAAEVCRTHPQYFLWPSDRFFVHYRPQQPGFPGRVDASGQ*
Ga0126382_120130181	3300010047	Tropical Forest Soil	MVYKANPALKVEFRVMQLNKDVTSVAYGFKGTAMAEIKSVALGYRSAVNQSDVAAIELERDRLDLHLAQECFNDYLQYACPVDLGRKDPEVCRTHPQYFLWPSDRFFIHNRPQ*
Ga0126373_110319641	3300010048	Tropical Forest Soil	AENRNLPVEFRVVQLGDKRTVVSYGFKGTAVEDIKKLAQEYRNAVALNADVAPIEMRQNILDYRLAQESFNDYLQYACPMDLARQDAEVCRTHPQYFIWPSDRFFLHHRPQ*
Ga0126373_130998531	3300010048	Tropical Forest Soil	FIVYAENPNLPVEFRVMQSGQESTSVSYGFRETAVDEIKRVALEYRRAVELNADIVQIEMRRDLLDYHLAQDSFTDYLQYACPVDPAHKNMDACRTHPQYFIWPSDRFFIHYRPQRSRP*
Ga0126372_127604771	3300010360	Tropical Forest Soil	KAVEDIKKMALEYRQAIASKADVAQIEMRQGLLDYHLAQDCFHEYLKYACPVDLARKDAEVCRTHPQNFIWPSDRFFIHYRPQ*
Ga0126378_103636343	3300010361	Tropical Forest Soil	SFLVYRQDPDLTVEFRVVQLGQETTIVSYGFKGTAVEDIKRIALEYRNESARGTDVAQIEMRQNLLDYHLAQDSFNDYLQHACPVDLAREDAEVCTTHPQYFISPSDRFFVHYRP*
Ga0126378_122805082	3300010361	Tropical Forest Soil	KGTALDDIKEIALEYRNAVALGTDPSQIEMGQNILDYHLAQESFNDYLKHVCPGGPARSTELCRTHPQFFLWPSDRFFVHYRPQ*
Ga0126379_105362772	3300010366	Tropical Forest Soil	YRERPQLPVEFRVVQVTDESTVVSYGFKGTALEAIRKNAQEHRTASDRKADTAPIEIRQSILNYHLAQESFAGYLQYACPVDLTRADAEVCKTHPQYFLWPSDRFFLHDRPQ*
Ga0126383_124972961	3300010398	Tropical Forest Soil	KKLALEYRSASTQDNLAEIEAERDRLDVHLAQESFHDYLQYACPVDLSRKDAEVCRTHPQYFLWPSERFFIHYRPQ*
Ga0126383_133086231	3300010398	Tropical Forest Soil	FRVMQLGKENAVVSYGFKGTALEEIRNKAEEYRTAIAANADLARIEMSQNILDYHLDQESFNDYLQYACPVDLGRSDAEVCRTRPQYFIWPSDRFFIHDRPE*
Ga0134127_118753951	3300010399	Terrestrial Soil	LEYRNATARKGDVSDIEKRQSLLVHRLAQDSFNDYLQYACPVDPARNDAEVCRTHPQYFIWPSDRFFIHYRPE*
Ga0134121_115254291	3300010401	Terrestrial Soil	NPDLAVEFRVMQIGQESTTVSYGFKGSAMQEIRQIALEYRNALGLQADVGPIEMKQKLLDYHLAQDSFSDYLQYACPVDLARKDAEVCRTHPQYFIWPSDRFFIHYRPE*
Ga0137464_11857182	3300011434	Soil	YGFKGSALKDIKTAALEYRNATAREVDVSEIEKRQSLLDYHLAQDSFSDYLQYACPGDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0137437_12293782	3300011442	Soil	ALKDIKTVALEHRDATARKADVTEIEIRQNLLDYHLAQDSFKDYLQYACPVDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0137363_115864731	3300012202	Vadose Zone Soil	ENPGLAVEFRVMQLGTERTIVSYGFKGTAVDDIKKIALEYRQAVASKADVAQIEMRQGLLDYHLAQDSFNDYLQYACPVDLARKDAEVCTTHPQYFTWPSDRFFIHYRPQ*
Ga0150985_1083987382	3300012212	Avena Fatua Rhizosphere	NAVARKADVAPIEVKQNLLDYHLAQDSFNDYLRHVCPADPAREETDGCQTHPQYFTWPSDRFFVHYRPQ*
Ga0150985_1148881562	3300012212	Avena Fatua Rhizosphere	GDFGAAGLLSFLVYREDPSRTVEFRILQTGKENTIVSYGFKGSALSEIRDLAGEYRSALALKTDLAPIEMKQNLLDYHLAQDSYNEYLQYACPLVLASKDGVACRTHPQYFTWPSERFFIHYRPQ*
Ga0150984_1144999381	3300012469	Avena Fatua Rhizosphere	VAGLFSFMVYREDPRLTVDFRVLQPGEQGAIVSYGLKGSALDEIRNVALEYRNAVALKADVAPIELKQNLIDYHLAQDSFNDYLRHVCPADPAREETDDCQTHPQYFTWPSDRFFVHYRPQ*
Ga0164301_116240691	3300012960	Soil	NVAVEYRNAIVREADVGQIEMRQNLLDYHLAQDSFNDYLQYACPVDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ*
Ga0126369_106357503	3300012971	Tropical Forest Soil	PDLKVEFRVLQLNKEVTSVSYGFKGTAAEEIKKVALEYRSASPQTDLPTEAERDRLDIHLAQECFSDYLQYACPVDLSRKDAEVCRTHPQYFLWPSERFFIHYRPQ*
Ga0126369_111745181	3300012971	Tropical Forest Soil	TALEDIKKAALEYRNATARKEDVAQIEMRQTLLDDHLAQDSFNDYLQYACPVDLARNDAEACRTHPQYFIWPSDRFFIHNRPQ*
Ga0164305_105449012	3300012989	Soil	QLGRESTSVSYGFKGTAVEDIKKIALEYRNAVALKADVAQVEMKQNLLDYHLAQDSFNDYLQYACPVDLARKDAEVCRTHPQYFTWPSDRFFIHYRPQ*
Ga0163162_122073251	3300013306	Switchgrass Rhizosphere	FMVYREDPSLAAEFRIMQPGKEGTIVSYGFKGSALEGIRNLALEYRSAAALKKDVTAIEMKQNLLDYHLAQDSYHEYPQYACPLDLTPKDRAVCRTHPQYFTWPSNRFFIHDRPQ*
Ga0134079_104526832	3300014166	Grasslands Soil	VALEYRDATAREADVSEIEKRQSLLDSDLARDSFNNYLQYACPVDLSRNDAEVCRTHPQYFIWPSDRFFTHDRPQ*
Ga0163163_129837012	3300014325	Switchgrass Rhizosphere	VYREDPGLTVEFRIVQPGKDGAIVAYGFKGSALEDVRNLALEYRSAAALKKDVTAIEMKQNLLDYHLAQDSYHEYLQYACPLDLTPKDRAVCRTHPQYFTWPSDRFFIHDRPQ*
Ga0157379_121044781	3300014968	Switchgrass Rhizosphere	MVYREDPSLAAEFRIMQPGKEGTIVSYGFKGSALEGIRNLALEYRSAAALKADVAPIEMKQNLLDYHLAQDSYHEYLQYACPLDLTPKDRAVCRTHPQYFTWPSDRFFIHDRPQ*
Ga0132258_112545821	3300015371	Arabidopsis Rhizosphere	LFSFMVYAENPDLAVEFRVMQIGQESTTVSYGFKGAAMQEIRQIALEYRKALGLQADVGPIEMKQKLLDYHLAQDSFSDYLQYACPVDLSRKDAEVCRTHPKNFLWPSDRFFVHYRPQ*
Ga0182032_118504922	3300016357	Soil	FMVYSEDPNLPVEFRVIKVGEESTIVSYGFKGTALDDIKKIALEYRNAVALGTNPSQIEMGQNILDYHLAQESFNDYLKHVCPGDPTRSTELCRTHPQFFLWPSDRFFIHYRPQ
Ga0182040_117300461	3300016387	Soil	EFRVIQLGGDNGVVSYGFKGSAAEEIRNIAQEYRAAVARNADVAPIEVKQSVLDYHLAQGSFHEYLQCACPADLSRPDAEVCRTHPQYFIWPSDRFFIHYRPQ
Ga0187819_106859061	3300017943	Freshwater Sediment	KGTAVEDIKKVALEHRNAVALKADVAEIEMRQSLLDYQLAQDSFNEYLQYACPVDLSRQDAEVCRTHPQYFIWPSDKFFIHYRPQ
Ga0187817_104720541	3300017955	Freshwater Sediment	ALTVEFRVVQPGKESAIVAYGFKAAAVEDIKKLALEYRDALAHKADVAQIEMKQNLLDYHLAQDSFNDYLQYACPVDLASKDAGVCRTHPQYFIWPSDRFFIHYRPQ
Ga0066667_100714391	3300018433	Grasslands Soil	LEYRSAVALNADVTQIELRQNLLDYHLAEESFRDYLQYACPVDLARKDAEVCRTHPQYFIWPSDRFFIHYRPQ
Ga0210407_105420931	3300020579	Soil	GKEGTTVSYGFKGTAVEDIKRLALEYRNAVALKTDVAQIEIKQNILDYHLAQDSFNDYLQHACPVDLARKDAEICRTHPQYFIWPSDRFFIHYRPQ
Ga0210403_104138272	3300020580	Soil	MEYRQAAASKADVSQIEMRQRVLDYNLAQDSFNEYLQYACPVDLARKDAEVCRTHPQYFIWPSDRFFIHYRLQ
Ga0210399_115916372	3300020581	Soil	RVDFRIIQPGKEDTIVSYGFKRNVVDDIRNLALEYRSAVALKKDVAQIEMRQQLLDYHLAQDSFNDYLRYVCSVDPARKDPGICRTHPQYFIWPSDRFFIHYRPQ
Ga0210401_110870331	3300020583	Soil	ALEYRNAVALKGDVAQIETKQDILDYHLAQDSFNDYLQYACPVDLARKDAEVCKTHPEYFIWPSDRFFIHYRPQ
Ga0210406_113645172	3300021168	Soil	VENPGVAPEFRVVQPGPECTIVSYGFKGRTVEDIKKIALEYRNAVALKADLVQIERRETALNYQLAQDSFNDYLQYACPVDLARKDAEVCKTHPQYFTWPSDRFFIHYRPQ
Ga0210400_105082042	3300021170	Soil	CVCRLVGESGERRKMEYRQAAASKADVSQIEMRQRVLDYNLAQDSFNEYLQYACPVDLARKDAEVCRTHPQYFIWPSDRFFIHYRLQ
Ga0210388_113710432	3300021181	Soil	GLYSFMVYREDPSLAVEFRVMQLGEESTIVSYGFKGTAVEEIKKVAREYRNAVALKADVAQIEMKQDLLDYNLAQESFNDYLQYVCPVDLAREDAEVCRTHPQYFIWPSDRFFLHYRPQ
Ga0210393_105632361	3300021401	Soil	VSYGFKGTALQDIKKVALEYRNAVALKADVAQIEMRWDLLDHHLAQDSFNDYLRNACPVDLARRDAEVCTTHPQYFIWPSDRFFVHYRPR
Ga0210393_115330061	3300021401	Soil	ERTIVSYGFKGTAIEDIKTVAREYRNAVALKADVAQIETKQDILDYQLAQDSFNDYLQHACPMDLASEGAAVCRTHPQYFIWPSDRFFIHYRPQ
Ga0210402_113655291	3300021478	Soil	ESAIVSYGFKKAAVEEIKKVALEYRNAVALKADLAEIETRQNLLDYRLAQDSFNDYLQYACPVDLARKDAEVCRTHPQYFTWPSDRFFIHYRPQ
Ga0126371_113548191	3300021560	Tropical Forest Soil	IVSYGFKGTAVEDIMKVALEYRQAVALRRDVAQIETKQNLLDYRLAQESFNDYLQYACPVDLNRKDAEICRTHPQYFIWPSDRFFVHYRPQ
Ga0126371_124118581	3300021560	Tropical Forest Soil	LGKDVTSVAYGFKGTAVEEIKKLALEYRSASTQDNLAEIEAKRDRLDVHLAQESFHDYLQYACPVDLSRKDAEVCRTHPQYFLWPSERFFIHYRPQ
Ga0126371_130193031	3300021560	Tropical Forest Soil	AVAGLFSFMVYQQNSRLQVEFRVMLPDREVTSVSYGFKRTAVEEIKKVALEYRSVVHQPDLATIEQKRDRLDAQLALECFNDYLQYVCPVDLSRKDAEVCRTHPQYFLWPSARFFIHYRA
Ga0126371_132065502	3300021560	Tropical Forest Soil	FSFLVYKEDPSIPVEFRVVQLNKENTIVSYGLKGTARDDIRQAALAYRNAVGRHEDVAPIETRQTLLDDRLAQDSFNEYLQYACPVDLARSDAEVCRTHPQYFIWPSDRFFIHYRAIIQTPSDNNL
Ga0207680_110005832	3300025903	Switchgrass Rhizosphere	AGQLSFMAYRENPGLSAEFRIMHPGQEGTVVSYGFKGSALEDIRNLALNYRSAVALKADVAPIEMKQNLLDYHLAQDSYHDYLKYACPLDLTPKDRLVCSTHPQYFTWPSDRFFIHYRPQ
Ga0207654_102689261	3300025911	Corn Rhizosphere	FMVYREDPSLAAEFRIMQPGKEGTIVSYGFKGSALEGIRNLALEYRSAAALKKDVTAIEMKQNLLDYHLAQDSYHEYLQYACPLDLTPKTRVVCRTHPQYFTWPSDRFFIHYRPQ
Ga0207693_109074052	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALEGIRNLALEYRSAAALKKDVAPIEMKQNLLDYHLAQDSYNDYLQYACPLDLTPRDRAVCRTHPQYFTWPSDRFFIHYRPQ
Ga0207663_105948761	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AESTIVSYGFKEAAVQEVQKVALEYRNAVALKADVAQIEMRQNLLDYHLAQDSFNDYLQYACPLDFTPKDRKVCRTHPQYFTWPSDRFFIHYRPQ
Ga0207664_109037761	3300025929	Agricultural Soil	LSFMVYREHPDLAVDFRVVQLGKADDTIVSYGFEGTARAEIQKLALEYRSAVAVKADVAGIELRRGLLDSRLANESFNEYLEFACPVDLARRDAEVCRTHPQYFIWPSERFFVHNRPR
Ga0207679_121206262	3300025945	Corn Rhizosphere	KTVALEYRNATAREAGVSEIEKRQSLLDDHLAQDSFRDYLQYACPVDLARNDAEVCRTHPQYFIWPSDRFFIHYRPQ
Ga0209773_103334141	3300027829	Bog Forest Soil	AVEFRVMQLGKENTIVSYGFKGTAVEDIKKVALEYQNAVALKADVAQIEMRQNLLDYHLAQDSYNDYLQYACPVNLARKDAEECRTHPRYFTWPSDRFFIHYRPQ
Ga0209465_104610212	3300027874	Tropical Forest Soil	KGTAAQEIKKVALAYRSASPQTDLPTEAERDRLDIHLAQECFSDYLQYACPVDLSRKDAEVCRTHPQYFLWPSERFFIHYRPQ
Ga0265340_102721532	3300031247	Rhizosphere	AVEYRSAAASKADVAGLAMRRDLLDAQLADESFSDYLQYACPVDLARHDFEVCRTHPRYFIWPSDRFFIHDRP
Ga0170818_1104806671	3300031474	Forest Soil	KENAMVSYGFKGPALEEIKNLALEYRNAAAQKADVAPIEMRQTLLDYRLAQDSFNGYLQYACPVDLARKDAEVCRTHPQYFIWPSDRFFVHYRPQ
Ga0310888_110498272	3300031538	Soil	KTVALEYRIATAGKADVSEIEKRQSLLDYRLAQDSFNHYLQYACPVDLARSDAEVCRTHPQYFIWPSDNFFLHYRPQ
Ga0265342_104414662	3300031712	Rhizosphere	TLAVDFRVVELGKEDTVVSYGFRGTALTDIQRLAVEYRSAAASKADVAGLAMRRDLLDAQLADESFSDYLQYACPVDLARRDFEVCRTHPRYFIWPSDRFFIHDRP
Ga0310813_115563371	3300031716	Soil	ALEDIKKVALEYRDAIVREADVAEIELRQSLLDYHLAQDSFNDYLQYACPVDLARKDAEVCHTHPQYFTWPSDRFFIHYRPQ
Ga0307469_123616412	3300031720	Hardwood Forest Soil	FSFMVYRENPSLGVEFRVIQLGNESTIVSYGFKGIAVEDIKNVALEYRNAVALKADVAQIEMRQSLLDYHLAQDSFNDYLQYVCPVDLSRKEGEVCRTHPQYFIWPSDRFLIHYRPQ
Ga0318494_106801031	3300031751	Soil	VSYGFKGSAAEEIRELAKEYRVAAARNADLAQIEVKQGVLDYHLAQDSFHEYLQYACPVDLSRPDAEVCRTHPQFFIWPSDRFFLHYRPQ
Ga0318521_102057612	3300031770	Soil	MQSGQESSSVSYGFRETAVEEIKKVALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAHKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0306925_115378332	3300031890	Soil	SAAEEIRNIAQEYRAAVARNADVAPIEVKQSVLDYHLAQESFHEYLQCACPADLSRPDAEVCRTHPQYFIWPSDRFFIHYRPQ
Ga0306923_123876641	3300031910	Soil	VEDIKRVAMGYRNAVEGKSDLKQIEMRWDLLDYHLTQDSFNEYLQYACPGGLGRKDAEVCRTHPQYFIWPSERFFIRYRPQS
Ga0310916_103093042	3300031942	Soil	LFSFMVYAENPSLPVEFRVMQSGQESTSVSYGFRETAVEEIKKVALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAHKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0310913_108076301	3300031945	Soil	PVEFRLMQSGQEGTSVSYGFRETAVEEIKKIALEYRRAVDLNADVAQIEMRRDLLDYHLAQDSFTDYLQHACPVNLAHKGIDACRTHPQYFIWPSDRFFIHYRPQ
Ga0318530_102980811	3300031959	Soil	YGFRETAVEEIKKIALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAHKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0318558_103658352	3300032044	Soil	MIYAENPSLPVEFRVMQSGQESTSVSYGFRETAVEEIKKVALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAHKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0318575_102665502	3300032055	Soil	LFTFMIYAENPSLPVEFRVMQSGQESTSVSYGFRETAVEEIKKVALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAYKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0318514_106550491	3300032066	Soil	SGQESTSVSYGFRETAVEEIKKVALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAHKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0318577_106236452	3300032091	Soil	IRNVALEYRNAIARKADVSRIEKEQSLLNYRLARDSFDDYLQYACPVDLDREDAEVCRTHPQYFTWPSDRYFIHYRPQ
Ga0318540_103333721	3300032094	Soil	PVEFRVMQSGQESTSVSYGFRETAVEEIKKVALEYRRAVDLNADVAQIEMRRDLLDYHLARDSFTDYLQHACPVDLAHKDMDACRTHPQYFIWPSDRFFIHYRPQ
Ga0310889_106216292	3300032179	Soil	AIARNADMAQIEARQNRFNYQLAQASFNEYLQYACPVDLARKDAEICTTHPQYFIWPSDRFFIHYRPQ
Ga0306920_1032333062	3300032261	Soil	AVEFRVMQLRGENAVVAYGFRGTALAEIRKLAEEYRSALARSADLAQIEVKQGILDYHLGQESFNDYLQYACPVDLGRRDAEVCRTHPQYFIWPSDRFFIHYRPQ
Ga0335079_107397452	3300032783	Soil	EFRVVQPGKESSIVSYGFKGPAIEDIKTIALEYRRAVASNIDVAPIELRQQLLDYHLAQDSFNDYLQHACPVDFGRTDAEVCRTHPQYFVWPSDRFFVHYRPQ
Ga0335080_116820791	3300032828	Soil	MAYKEDPSLSVEFRVVHLDKESTIVSYGFKGQALDDIRKAALEYRNAATRKEDAARIDTRQTLLDDRLAQDSFNEYLQYACPVDLARSDAEVCRTDPQYFIWPNDRFFIHYRPQ
Ga0335076_111006232	3300032955	Soil	RLAVDFRVLQPGKDDTVVSYGFKGTAVADIQRLAAEYRGAAAVKADVAGIEMRRDLLDSRLADESFNDYLRYACPVDLARHDAEVCKTHPQYFIWPSERFFVHNRPR
Ga0335084_113296122	3300033004	Soil	IQRLAAEYRDATAIGADVAGIEMRRALLASRLADEGFNDYVQHACPVDLARHDAEVCKTHPQYFIWPSDRFFIHNRPR
Ga0326723_0610102_1_267	3300034090	Peat Soil	YGFKGTALEDIRNVALEYRNALALHQDVAHIEMRQKILDYHLAQESFNDYLQYACPVDLTRKDAEVCRTHPQYFLWPSDRFFVHYRPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072582

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences