Metagenome Family F072674

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072674
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	102 residues
Representative Sequence	MLISTTIFLFFLFLTYALFLLASRKSDARQERLQQRVAEALQESSNRSLDDSIQITREDSIGGNPAINRLLSSLDFVKKLDQMINQADVQITVSRLLAFSFV
Number of Associated Samples	98
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.35 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.471 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.355 % of family members)
Environment Ontology (ENVO)	Unclassified (43.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.62% β-sheet: 0.00% Coil/Unstructured: 35.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00437	T2SSE	55.37
PF07811	TadE	1.65
PF01656	CbiA	0.83
PF07940	Hepar_II_III	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG5360	Uncharacterized conserved protein, heparinase superfamily	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.47 %
Unclassified	root	N/A	16.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.47 %
Unclassified	root	N/A	16.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.47 %
Unclassified	root	N/A	16.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.93 %
Unclassified	root	N/A	16.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.92 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	27.27 %
Unclassified	root	N/A	16.53 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	27.27 %
Unclassified	root	N/A	16.53 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	27.27 %
Unclassified	root	N/A	16.53 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.48 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	27.27 %
Unclassified	root	N/A	16.53 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	1.65 %
Pandoraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	27.27 %
Unclassified	root	N/A	16.53 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	1.65 %
unclassified Pandoraea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → unclassified Pandoraea	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	27.27 %
Unclassified	root	N/A	16.53 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	1.65 %
Pandoraea sp. B-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → unclassified Pandoraea → Pandoraea sp. B-6	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1712744	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300000559\|F14TC_100309159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	677	Open in IMG/M
3300000891\|JGI10214J12806_10846112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3412	Open in IMG/M
3300004156\|Ga0062589_100670897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	914	Open in IMG/M
3300004156\|Ga0062589_100850053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	833	Open in IMG/M
3300004463\|Ga0063356_100275692	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300004480\|Ga0062592_102649926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	506	Open in IMG/M
3300004779\|Ga0062380_10582555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	503	Open in IMG/M
3300004782\|Ga0062382_10622356	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005289\|Ga0065704_10235526	Not Available	1030	Open in IMG/M
3300005293\|Ga0065715_10782335	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005295\|Ga0065707_10035926	Not Available	1098	Open in IMG/M
3300005328\|Ga0070676_10917373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	653	Open in IMG/M
3300005330\|Ga0070690_101001599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	658	Open in IMG/M
3300005406\|Ga0070703_10587092	Not Available	512	Open in IMG/M
3300005440\|Ga0070705_101042079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	666	Open in IMG/M
3300005445\|Ga0070708_100878731	Not Available	842	Open in IMG/M
3300005468\|Ga0070707_101223760	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005468\|Ga0070707_101332656	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005468\|Ga0070707_101347257	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005468\|Ga0070707_102316619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	504	Open in IMG/M
3300005471\|Ga0070698_100159731	All Organisms → cellular organisms → Bacteria → Proteobacteria	2198	Open in IMG/M
3300005471\|Ga0070698_101492910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005471\|Ga0070698_101681819	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005518\|Ga0070699_100584603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1018	Open in IMG/M
3300005518\|Ga0070699_101764150	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005536\|Ga0070697_101679723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	568	Open in IMG/M
3300005543\|Ga0070672_101862014	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005546\|Ga0070696_100018585	All Organisms → cellular organisms → Bacteria → Proteobacteria	4700	Open in IMG/M
3300005546\|Ga0070696_100533566	Not Available	938	Open in IMG/M
3300005546\|Ga0070696_101837136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Pandoraea → unclassified Pandoraea → Pandoraea sp. B-6	524	Open in IMG/M
3300005546\|Ga0070696_102014979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	501	Open in IMG/M
3300005549\|Ga0070704_101102940	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005552\|Ga0066701_10529911	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005564\|Ga0070664_101360225	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005615\|Ga0070702_100889256	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005617\|Ga0068859_102918803	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300005618\|Ga0068864_101820162	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005618\|Ga0068864_102706870	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005719\|Ga0068861_100132877	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300005719\|Ga0068861_100793447	Not Available	888	Open in IMG/M
3300005844\|Ga0068862_100424863	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300006173\|Ga0070716_100425155	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006844\|Ga0075428_102002475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	600	Open in IMG/M
3300007076\|Ga0075435_101798288	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300007265\|Ga0099794_10756498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	519	Open in IMG/M
3300009088\|Ga0099830_11251137	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009098\|Ga0105245_12476230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	572	Open in IMG/M
3300009147\|Ga0114129_11510486	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300009148\|Ga0105243_12548563	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009156\|Ga0111538_10878466	Not Available	1135	Open in IMG/M
3300009162\|Ga0075423_11776630	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300009840\|Ga0126313_10949825	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300010046\|Ga0126384_11478049	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300010396\|Ga0134126_11983660	Not Available	636	Open in IMG/M
3300010399\|Ga0134127_12851470	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010399\|Ga0134127_13543510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	512	Open in IMG/M
3300010399\|Ga0134127_13627796	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300010400\|Ga0134122_11356442	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300010403\|Ga0134123_13408807	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300011271\|Ga0137393_11116410	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300011444\|Ga0137463_1135087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	928	Open in IMG/M
3300011444\|Ga0137463_1197446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	754	Open in IMG/M
3300012201\|Ga0137365_10622584	Not Available	790	Open in IMG/M
3300012202\|Ga0137363_10546864	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300012203\|Ga0137399_11658915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	527	Open in IMG/M
3300012208\|Ga0137376_10528030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1023	Open in IMG/M
3300012212\|Ga0150985_112677355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1183	Open in IMG/M
3300012361\|Ga0137360_11235949	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300012361\|Ga0137360_11568279	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012362\|Ga0137361_10763840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	881	Open in IMG/M
3300012362\|Ga0137361_11339272	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300012363\|Ga0137390_11145333	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012469\|Ga0150984_101636387	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012918\|Ga0137396_10615081	Not Available	803	Open in IMG/M
3300012923\|Ga0137359_10054456	All Organisms → cellular organisms → Bacteria → Proteobacteria	3480	Open in IMG/M
3300012923\|Ga0137359_11575011	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012925\|Ga0137419_11356663	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012927\|Ga0137416_11499002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	612	Open in IMG/M
3300012929\|Ga0137404_10755551	Not Available	882	Open in IMG/M
3300012930\|Ga0137407_10415594	Not Available	1247	Open in IMG/M
3300012930\|Ga0137407_11224338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	713	Open in IMG/M
3300012960\|Ga0164301_10619126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	802	Open in IMG/M
3300013294\|Ga0120150_1047790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	829	Open in IMG/M
3300014326\|Ga0157380_11283042	Not Available	779	Open in IMG/M
3300015264\|Ga0137403_10198534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1940	Open in IMG/M
3300015373\|Ga0132257_104620842	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300016357\|Ga0182032_11023313	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300017789\|Ga0136617_11155926	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300018027\|Ga0184605_10028052	All Organisms → cellular organisms → Bacteria → Proteobacteria	2306	Open in IMG/M
3300018077\|Ga0184633_10168361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1135	Open in IMG/M
3300018079\|Ga0184627_10159619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1194	Open in IMG/M
3300018476\|Ga0190274_11100854	Not Available	874	Open in IMG/M
3300018476\|Ga0190274_12064497	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300020003\|Ga0193739_1039952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1214	Open in IMG/M
3300021445\|Ga0182009_10657466	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300025917\|Ga0207660_11075984	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300025922\|Ga0207646_11038883	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025925\|Ga0207650_10533870	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300025934\|Ga0207686_11491817	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300025981\|Ga0207640_10968132	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300026089\|Ga0207648_10063964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3206	Open in IMG/M
3300026089\|Ga0207648_11890744	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300026118\|Ga0207675_100873034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	915	Open in IMG/M
3300026118\|Ga0207675_102627424	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300026320\|Ga0209131_1324962	Not Available	571	Open in IMG/M
3300027778\|Ga0209464_10398079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	508	Open in IMG/M
3300027843\|Ga0209798_10006006	All Organisms → cellular organisms → Bacteria → Proteobacteria	6911	Open in IMG/M
3300027907\|Ga0207428_10746606	Not Available	698	Open in IMG/M
3300027909\|Ga0209382_11497949	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300028380\|Ga0268265_11191700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	759	Open in IMG/M
3300031716\|Ga0310813_10741996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	880	Open in IMG/M
3300031716\|Ga0310813_10916327	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031824\|Ga0307413_10540428	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300032002\|Ga0307416_100628783	Not Available	1156	Open in IMG/M
3300032004\|Ga0307414_10428244	Not Available	1155	Open in IMG/M
3300032174\|Ga0307470_10608203	Not Available	818	Open in IMG/M
3300032180\|Ga0307471_103701420	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300033412\|Ga0310810_10714875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	928	Open in IMG/M
3300034165\|Ga0364942_0189809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.25%
Host-Associated	Host-Associated	29.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.98%
Plants	Host-Associated → Plants	29.75%
Aquatic	Environmental → Aquatic	8.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.05%
Freshwater	Environmental → Aquatic → Freshwater	4.13%
Sediment	Environmental → Aquatic → Sediment	4.13%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.32%
Loam	Environmental → Terrestrial → Soil → Loam	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.31%
Ice	Environmental → Aquatic → Freshwater → Ice	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_17127441	3300000033	Soil	MFLSLWTLIFLFFLFLTYALFLMASRKADARQERLKQRVAEALQENSELTLEQTIQITRDDSISSNPTINRLLSPLNFVKKLDQMVQQADMQITVSRLLAFCLIAGLM
F14TC_1003091591	3300000559	Soil	VLISTLVFLFFLFLTYALFLIASRKSDVRHERLQQRVSEALQERLAGPEAEIQISREDSIGGSPIINRVLSSLNFIKSLDKVIRQADVQITVIRLLTFSLFAGLMAGLAAYTIFNGLLAILAAGIAAAIPIVH
JGI10214J12806_108461124	3300000891	Soil	MLISTVIFLFFLFLTYALFLLGMRKSDARDQRLEQRVAEALRESDSVYEGEVHITRADSIGGNPLVNHLLSKLDFVKRLDRTIKQADVHTTVSRLLGFSGVAGLMAMLAASTVVNSMSAFVIALVAAALPILHVSM
Ga0062589_1006708971	3300004156	Soil	MLISTIIFLFFLFLTYALFLLASRKADAREQRLEERVAAALRESEGAYEDEVRITRDDSIGGNPLVNRVLSSLDFVKRLDRMIKQADVHTTVSRLIGFSAVAGLMGGLAASTVMNSIAVIMLGFLAGAIPILHV
Ga0062589_1008500532	3300004156	Soil	MLISTTIFLFFLFLTYALFLLGSRKSDARDQRLEERVAEALREDGALLDGEIQITRNDSIGGNPLVNRILSSLDFVKRLDLMIKQADVRTTVSRLLGFSIVAGLMAGLAASTVVNPVSAFVLAIVGAALP
Ga0063356_1002756923	3300004463	Arabidopsis Thaliana Rhizosphere	MLISTVVFLFFLFLTYAAFLAASRKSDARQARLEQRVAQALEANTSSDGTVQISREDSIGGPQAVNRLLSSLDFAKKLD
Ga0062592_1026499261	3300004480	Soil	MLISTIIFLFFLFLTYALFLLASRKADAREQRLEERVAAALRESEGAYEDEVRITRDDSIGGNPLVNRVLSSLDFVKRLDRMIKQADVHTTVSRLIGFSAVAGLMGGLAASTVMNSIAVIMLGF
Ga0062380_105825551	3300004779	Wetland Sediment	MLISTFVFLFFLFLVFALFLLASRKSEAREARLEQRVAEALQGLRPSDDPIQISRDDSIGRNPTISRLLSSINVIKRIDRMIRQADVGITVSRLLTFCFFS
Ga0062382_106223561	3300004782	Wetland Sediment	MLISTFVFLFFLFLVFALFLLASRKSEAREARLEQRVAEALQGLRPSDDPIQISRDDSIGRNPTISRLLSSINVIKRI
Ga0065704_102355262	3300005289	Switchgrass Rhizosphere	MLISTVVFLFFLFLVYALFLMASRKSDARQEHLQQRVAQALQGLPSLDDPIQISRDDTIGGYQVINRLLSSVDLIKKLDRMIRQADVQITVSRLLVFCIIAGL
Ga0065715_107823352	3300005293	Miscanthus Rhizosphere	MLISTVVFLFFLFLTYAIFLLTSRKADARHMLLQKRVAEALQDFGSQDQEIQLSREDSIGGSPAINKILSSLD
Ga0065707_100359262	3300005295	Switchgrass Rhizosphere	MLISTVVFLFFLFLVYALFLMASRKSDARQEHLQQRVAQALQGLPSLDDPIQISRDDTIGGYQVINRLLSSVDLI
Ga0070676_109173731	3300005328	Miscanthus Rhizosphere	MLISTTIFLFFLFLTYALFLLGSRKSDARDQRLEERVAEALREDGALLDGEIQITRNDSIGGNPLVNRILSSLDFVKRLDLMIKQADVHTTVSRLLGFSIVAGLMAGLAASTVVNPVSAFVLAIV
Ga0070690_1010015992	3300005330	Switchgrass Rhizosphere	VLISTLIFLFFLFLTYALFLIATRKSDARSERLQQRVSEALQEKLASSDAEVQISRVDSIGGSPSINRLLSSINFIKSLDQTIRQADVQITVSRLLGFSLFAGLMAGFA
Ga0070703_105870922	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTVVFLFFLFLVYALFLMASRKSDARQEHLQQRVAQALQGLPSLDDPIQISRDDTIGGYQVINRLLSSVDLIKKLDRMIRQADVQITVSRLLVFCIIAGLMGGLAAYTLTSGVAALVLGVQ
Ga0070705_1010420791	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTIIFLFFLLLTYAIFLMASRKSDARHERLQQRVAEALREIQNTTRDDIQIARKDSIGGSASVNRLLSGLDLIRTLDQMIRQADIHITV
Ga0070708_1008787311	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTFVFLFFLFATYALYVATSRKSDTRQARLQQRVAQALQESSSTSFDHNIQIAREDSIGGVPFINRLLSLLDLTNHLDRMLRQADMQITV
Ga0070707_1012237601	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTIVFLFFLFLTYAAFLFASGKADARQARLAQRVAEALQESSTRSLDEAIQITREDSIGGNPMINQLLSSLDLTRKLDQMLRQADLQITVSRLLVFCFI
Ga0070707_1013326561	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTVVFLFFLFLVYALFLMASRKSDARQEHLQQRVAPALQGLPSLDDPIQISRDDTIGGYQVINRLLSSVDLIKKLDRMIRQADVQITVSR
Ga0070707_1013472572	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDARQERLQQRLAEALQDSSGSGSSNDVVQISREDTIGGNPAINRLLSSLDFIKKLDQVIRQA
Ga0070707_1023166192	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTFVFLFFLFLVYALFLLASRKSDARQERLQQRVAEALGDLGPSEDLIIQISRDDSIGGNPAINRLLSSLDFAKKLERMISQADVEITVSRLLTFCFFSAVFAGLAAYTVLN
Ga0070698_1001597313	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTIFLFFLFLTYALFLLVSRKSDARDLRLEQRVAEALRESDTGSLDAIQIVRSDSIGGNPTINRLLSSLDFVKRLDRMIEQADVHTTVSRLLGFSVVAGLMGALAASSVLSS
Ga0070698_1014929102	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTVFLFFLFLVYALFLLATRKSDARQDRLQQRVDDALRDTKPSDDPIQIARNDSIGGTPIINQILSSLDFIKKLDTQIRQAGVGITVSRLLLFCVFSGLLGGLAAYTVTNSFFALLVGIVTGIAPILNISW
Ga0070698_1016818192	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTVVFLFFLFLTYALFVMASRKSDARQARLERRVAEALQDFGQQDSHLQISREDTIGGHPTINRLLSSLNVTKTIDEMIRQADVQI
Ga0070699_1005846031	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTVFLFCLFLTYALFLVASRKSDDRQARLQQRVAEALQESSSSQGDAVQISREDTIGGSATVNRLLSSLDFVNKLDRMIRQADMQITVSRLIAFSFGAGLMAALAAST
Ga0070699_1017641501	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLLSTTVFLFCLFLTYALFVLASRKSDDRQARLKHRVAEALQESDTSHADVVHISRDDTIGGSATVNRLLSSLDFVNKLDKMIRQADMQITVS
Ga0070697_1016797231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDARQERLQQRVAEALQESSNRSLDDSIQITREDSIGGNPAINRLLSSLDFVKKLDQMINQADVQITVSRLLAFSFV
Ga0070672_1018620141	3300005543	Miscanthus Rhizosphere	MFLSLSTLIFLFFLLLTYALFLFASRKSDARQVRLQQRVAEALQDNSELTLEQSIQITRDDSISGNPTLNRLLSRLNFVKQLDSLIQQADMQITVSRLLTFSVIAGAMAGLASYTV
Ga0070696_1000185856	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTVIFLFFLFLTYALFLMASRKSDAREQRLEERVAEALRDSDSTAFEGEVRITRDDSIGGNPIINRLLSSLDFVKRLDLLIRQADVQTTVSRLLGFSTVAGLMGAF
Ga0070696_1005335662	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTVIFLFFLFLTYGLFLIASRQSDARDERLQKRVAEVLRDSNSVYEGEIQITRADSIGGNPLIHRILSSLDFVKRLDLMIKQADVNT
Ga0070696_1018371361	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTVVFLFFLFLTFALFLFASRKSDARQARLEQRVAQALQEVSHTEDFVQIAREDSIGGYPLINQLLSSLDFVKKLDRMIRQADLDITVSRLLTFCFFTGLLAGLAAYTVLNPLFAAVIALLGGIAPILHVARKRSKRL
Ga0070696_1020149791	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDAREQRLEERVAEALREVDSPAFEGEIQITRDDSIGGNPTVNRLLSSLDFVKRVDRMIKQADIQTTVSRLLGFSTVAGVLGGLAASTVLNSVAVIMLGFLAGAIPILHVARKR
Ga0070704_1011029402	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MFLSLSTLIFLFFLLLTYALFLFASRKSDARQVRLQQRVAEALQDNSELTLEQSIQITRDDSISSNPTLNRLLSRLNFVKQLDSLIQQADMQITVSRLLTFSVIAGAMAGL
Ga0066701_105299112	3300005552	Soil	MLISTFVFLFFLFVTYALYVIASHKSDARQARLQQRVAQALQESSSTSFDQNIQIAREDSIGGVPFINRLLSSLDLTKNLDRMLRQADMQITVTRLLVFCFVAGL
Ga0070664_1013602252	3300005564	Corn Rhizosphere	MLISTVVFLFFLFLTYAIFLLTSRKANARHMLLQKRVAEALQDFGSQDQEIQLSREDSIGGSPAINKILSSLDFIRKLDRNI
Ga0070702_1008892562	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MFLSLSTLIFLFFLLLTYALFLFASRKSDARQVRLQQRVAEALQDNSELTLEQSIQITRDDSISSNPTLNRLLSRLNFVKQLDSLIQQA
Ga0068859_1029188031	3300005617	Switchgrass Rhizosphere	MLLSTTIFLFCLFITYALFLVATRKSDDRQARLRRRVTEALQESNGFETEVVRLSREDTIGGSASMNRFLSSLDVVNRLDSMIRQADLQITVSRLIGFSVGAALMAALAAYTTFGTITVIVSAIIA
Ga0068864_1018201621	3300005618	Switchgrass Rhizosphere	MLISTVVFLFFLFLVFALFLLATRKTDARQDRLEQRVADALRDSRPSDDPIQISRNDSIGGHPLVNQILSSLDFIKKLDQHIRQAGVEITVSRLLL
Ga0068864_1027068702	3300005618	Switchgrass Rhizosphere	MIVSTFILLFFLLVTYAFFLLASRKSDARSIRLQQRISEALQESSSLSLEEALKITRDDSISSNATLNRLLSSLDFINKLDVMISQADMHIT
Ga0068861_1001328771	3300005719	Switchgrass Rhizosphere	MLLSTIIFLFFLFLTYALFLMASRKSDARQARLQQRVSEALQEAPNRSIEEAIQITRQDSISRNPTLHRLLSPLNVINRLDRTLRQADMQITVSRLLG
Ga0068861_1007934471	3300005719	Switchgrass Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDARYSRLQQRVAEALQDSEKTTQEPVQISRGDSIGGSETINKLLSSLDFVKKLDQMIGQADVHI
Ga0068862_1004248631	3300005844	Switchgrass Rhizosphere	MLLSTVIFLFFLFLTYALFLMASRKSDARQARLQQRVSEALQEAPNRSIEEAIQITRQDSISRNPTLHRLLSPLNVINKLDRTLRQADMQITV
Ga0070716_1004251552	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFISTVVFLFFLFLVYALFLLASRKSDARQERLQQRVAEALQGLGSTDKEIQISREDSIGGHPIINRLLSSLNFIKQFDRTVRQADLQITVSRLLAFCLLAGVMAWLAAYTLMNPVVAVL
Ga0075428_1020024751	3300006844	Populus Rhizosphere	MLLSTTIFLFFLFLTYALFLLMTRKQDARDERLEQRVKEALQETFETSEGAVQITRNDSIGGNPTVHRILSSLNFVKNLDKMIKQADVQITVYKLLLFGVIAGIM
Ga0075435_1017982882	3300007076	Populus Rhizosphere	MLLSTVIFLFFLFLTYALFLLASRKSDARGARLEQRVAEALQESPQRSIEEAIQITRQDSISRNATIHRLLSSLSFVDRLDRTIRQADLQITVSRLLAFCFVAAV
Ga0099794_107564981	3300007265	Vadose Zone Soil	MLISTLVFLFFLFLVYALFLLATRKADDRQERLQQRVAEVLQASRSSDDPVQISRDDSIGGSPTINRLLSSIDFIRSFDRMIRQADIDITVSRLLA
Ga0099830_112511372	3300009088	Vadose Zone Soil	MLISIVVFLFFLFLTYALFLLATRKSDARQARLQQRVVEALQDSIRPSDQEVQISREDTIGGNPAINRLLSSLDFIKKL
Ga0105245_124762302	3300009098	Miscanthus Rhizosphere	MLISTVIFLFFLFLTYGLFLIASRQSDARDERLQKRVAEVLRDSNSVYEGEIQITRADSIGGNPLIHRILSSLDFVKRLDLMIKQADVNTTVSRLLGFSLVAGLMAALAASTMFNLVAVVVFGVLAGSLPILHVARLRQKRLRTFNSQ
Ga0114129_115104861	3300009147	Populus Rhizosphere	MLLSTTIFLFCLFITYALFLVATRKSDDRQTRLRRRVSEALQESTADFESEIVRISREDTIGGSASVNRLLSSLDVIKRLDDMIRQANMQITVSRLIGFSVGAGLMAALAAYTVFGIITV
Ga0105243_125485632	3300009148	Miscanthus Rhizosphere	MLISTVVFLFFLFLTYAIFLLTSRKADARHMLLQKRVAEALHDFGSQDQEIQLSREDSIGGSPAINKILSSLDFIRKLDRNIRQAGVQI
Ga0111538_108784662	3300009156	Populus Rhizosphere	MLISTVIFLFFLLLTYALFLFASRKSEARSTRLQHRVAEALQESSSLSLDEALHITRDDSLSSNATLNRLLSSLDFVKKLDVMISQADIQVTVSK
Ga0075423_117766302	3300009162	Populus Rhizosphere	MLLSTTIFLFCLFITYALFLVATRKSDDRQTRLRRRVAEALQESGDSESDIVHISREDTIGGSASINRFLSSLDFIKSLDDTIRQADMQI
Ga0126313_109498252	3300009840	Serpentine Soil	MLLSTFIFLFFLFLTYALFLTATRKSEARQARLQQRVAEALQESKSLSIAEAIQITRDDSISANATLNRLLSRMDVIKRLETIISQADMHITVSRLLLFCFGT
Ga0126384_114780491	3300010046	Tropical Forest Soil	MLLSTIIFLFFLFATYAVFLIMTRKQDARDERLEQRLREALQETLDSEGAIQIIQKDSIGGNPTIHRILAPLNFVKSLDNLIKQADVQITVSRLLGVSIIAGVMAGLAAATIFSSVAVVVFALLAATVPT
Ga0134126_119836602	3300010396	Terrestrial Soil	MLLSTVIFLFFLFLTYALFLLASRKSDARGARLEQRVAEALQESPQRSIEEAIQITRQDSISGNATIHRLLSSLSFVKRLDLTIRQADLTITVSRLLAFCFVA
Ga0134127_128514701	3300010399	Terrestrial Soil	MLISTFVFLFFLFLVYALFLVASRKTHARQERLEQRVTEALQGLNTTVDPIQISRDDSIGGHPLINRL
Ga0134127_135435102	3300010399	Terrestrial Soil	MLISTFVFLFFLFLVYALFLLASRKSDAREERLQQRVAEALRGLGPADAPIQISREDSIGGHPLINRLLSSLDFVKRMDRMISQADVDITVSRLLTFCFIAAVFAGLAAYTVLNFIVAFPLGLLAGI
Ga0134127_136277961	3300010399	Terrestrial Soil	MLLSTVIFLFFLFLTYALFLLASRKSDARGVRLEQRVAEALQESPQRSIEEAIQITRQDSISGNATIHRLLSSLSFVKRLDRTIRQADLQITVSRLLAFCFVAAVMAAL
Ga0134122_113564422	3300010400	Terrestrial Soil	MLLSTVIFLFFLFLTYALFLLASRKSDARGARLEQRVAEALQESPQRSIEEAIQITRQDSISGNATIHRLLSSLSFVK
Ga0134123_134088072	3300010403	Terrestrial Soil	MLISTTIFVFFLFLTYALFLLGSRKSDARRMRLEQRVAKALQESASPEALVQISRDDSIGGTVAINQLLSSLNFVRKLDQNIRQADM
Ga0137393_111164101	3300011271	Vadose Zone Soil	MLLSTTVFLFCLFLTYALFVLVSRKSDDRQARLKHRVAEALQESDTSHGDVVHISRDDTIGGSATVNRLLSSLDFVNKLDNMIRQADMHITVSRLFAFSFGAGLMAALAASTVFSTLTIVISSLIAAAVPILHVAWKRKKRHAR*
Ga0137463_11350871	3300011444	Soil	MLISTIIFLFFLFLTYALFLMASRKSDARDERLEQRVAEALRDSEGSFEGEIRITRADSIGGNPTVNRLLSSLDFVKRLDLMIKQADVHTTVSRLLGFSAVAGLM
Ga0137463_11974461	3300011444	Soil	MLISTIVFLFFLFLTYALFLLASRKADTRHERLEQRVAEALEGSQIATEEFVEISREDSIGGLPTINRLLSSLDFVKRLDLMIKQADVHTTVSRLLAFSAVAGLMGAF
Ga0137365_106225842	3300012201	Vadose Zone Soil	MLISTIIFLFFLFLTYALFLLASRKSDARQERLQQRVAEALQDSSGSGSSNEVVEIAREDSIGGNPTINRLLSSLAFVKK
Ga0137363_105468641	3300012202	Vadose Zone Soil	MLISTVVFLFFLFLVYALFLLATRKADDRQERLQQRVAEALQASRSSDDPVQISRNDSIGGSPTINRLLSSFDFIRR
Ga0137399_116589152	3300012203	Vadose Zone Soil	MLISTIVFLFFLFLTYAGFLVASRKSDARQARLHQRVAEALGETTELSLEDAIRITRDASISSNPTLNRLLSSLNVINRIDEMIRQADMQITVSRLLAF
Ga0137376_105280302	3300012208	Vadose Zone Soil	MLISTIIFVFFLFLTYALFLLASRKSDARQARLQQRVSAALQESASPDELIQISRDDSIGGNPAINRLLSSLAFVRNLDQAIRQADMRITVIRLLIFCLFAGLMAGLAAYTVLSPIFALVLTIPAAALPLLHLK
Ga0150985_1126773551	3300012212	Avena Fatua Rhizosphere	VLISTLIFLFFLFLTYALFLIASRKSDTRHKRLEQRVAEALQEKLGSTEAQVQISREDSIGGGPTINRLLSSLNFIKNLEKAIRQADVQITVSRLLGFSLF
Ga0137360_112359492	3300012361	Vadose Zone Soil	MLISTLVFLFFLFLVYALFLLATRKVDARQERLQQRVAEVLQSSRSSDDPVQISRNDTIGGNPTINRLLSSFEVIRSFDRMIRQADMD
Ga0137360_115682791	3300012361	Vadose Zone Soil	MLISTFVFLFFLFATYALYVLASNKSDTRQARLQQRVAQALQESSTVSFEDIQLAREDSIGGVPFINRLLSSLDLTKNLDRMLRQADMQITVSRL
Ga0137361_107638401	3300012362	Vadose Zone Soil	MLISTLVFLFFLFLVYALFLLATRKVDARQERLQQRVAEVLQSSRSSDDPVQISRNDTIGGNPTINRLLSSFEFIRSFDRMIRQADMDITVSRLLAFCFFAGLMAGLAAYTLVNSVLAVLAAI
Ga0137361_113392721	3300012362	Vadose Zone Soil	MLISTVVFLFFLFLVYALFLLASRKTDARQERLQQRVAEALRGLSSSDEAIQISRDDSIGGHPVINRLLSSLDFIKSFDQMIRQAGLQITVSRLLAFCFMASLMAGLAAYTLMNPVFAILFAVVGGSLPIG
Ga0137390_111453332	3300012363	Vadose Zone Soil	MLLSTTVFLFFLFLTYAVFLLASRRSDARQARLQQRVAEALQDFGSPDEVTISREDSIGGNPTINRLLSSLDFIKRLDRTIRQA
Ga0150984_1016363871	3300012469	Avena Fatua Rhizosphere	MLLSTTIFLFCLFITYALFLVATRKSDDRQARLRRRVAEALQESSGFEADVEHISRQDTIGGSAGINRFLSSLDVVKRLDDMIRQADIQITVSRLIAFSL
Ga0137396_106150811	3300012918	Vadose Zone Soil	MLISTVVFLFFLFLVYALFLLATRKEDDRQERLQRRVAEALQSSRSSDDLVQISRDDTIGGSPTINR
Ga0137359_100544561	3300012923	Vadose Zone Soil	MLISTVVFLFFLFLVYALFLLATRKEDDRQERLQRRVAEALQSSRSSDDLVQISRDDTIGGSPTINRLLSSFD
Ga0137359_115750111	3300012923	Vadose Zone Soil	MLISTIVFLFFLFLTYAGFLVVSRKSDARQARLAQRVAEALGETTELSLEDAIRITRDDSISSNPTLNRLLSSLNVINKIDEMLRQADLQITVSRLLAFCICAAIMAGLAAFTVMNAPAAIGL
Ga0137419_113566631	3300012925	Vadose Zone Soil	MLISTVVFLFFLFLVYALFLLATRKADDRQERLQRRVAEALQSSHSSDDPVQISRVDSIGGSPAINRLLSSFDFIRSFDRMIRQADMDITVSRLLAFC
Ga0137416_114990022	3300012927	Vadose Zone Soil	MLISNIIFLFFLFLTYAVFLLVSRKSDARDERLEERVAEALRESEVGSFHGEIRITRDDSIGGNPLVNRLLSSLDFVKRLDLMIKQADVHTTVSRLLGFSAVAGVMAGLAASTIVNSVSAFFLAILAAAVPIV
Ga0137404_107555511	3300012929	Vadose Zone Soil	MLISTTIFLFFLFLTYALFLLASRKSDARDERLEQRVAEPLRESDTASASYEREIRITRDDSIGGNPTVNRLL
Ga0137407_104155942	3300012930	Vadose Zone Soil	MLISTIVFLFFLFLTYAGFLVVSRKSDARQARLAQRVAEALGETKELSLEDAIRITRDDSISSNPTLNRLLSSLNVINKIDEMLRQADLQITVSRLLAFC
Ga0137407_112243382	3300012930	Vadose Zone Soil	MLISTTIFLFFLFLTYALFLLASRKSDARDERLEQRVAEALQESDTGSFDGEIQITRDDSIGGNPAINRLLSSLDFVKRLDLMIKQADVHTTVSRLLGFSAVAGLMGA
Ga0164301_106191262	3300012960	Soil	MLISTFIFLFFLFLTYGLFLLLTRKADARDLRLEQRVAEALRESEGGFDEGVQITREDSIGGNPFINRVLSSLDFVKRLDLMIKQADVHTTVTRLLGFSAVAGIMAAFAASTVLNSIAVVVLGALAGILPILYVA
Ga0120150_10477901	3300013294	Permafrost	MLISTIIFLFFLFLTYALFLLASRKSDARDQRLEQRVAEALRESEGGSLDEAIQITRVDSIGGSPTINRLLSSLDFVKRLDLMIKQADVHTTVSRLLAFSAVAGLMAALAASTVLNSI
Ga0157380_112830422	3300014326	Switchgrass Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDAREQRLEERVAEALREVDSPAFEGEIQITRDDSIGGNPTVNRLLSSLDFVKRVDRMIKQADIQ
Ga0137403_101985341	3300015264	Vadose Zone Soil	MLISTTIFLFFLFLTYALFLLASRKSDARDERLEQRVAEALQESEIAPLDETIQITRDDSIGGSPTINHLLSSLDFAKRLDLMIKQADVHITVSRLLAFSFIAGLMALLAAYTIL
Ga0132257_1046208421	3300015373	Arabidopsis Rhizosphere	MLLSTTIFLFCRFITYALFLVATRKSDDRQARLRRRVAEALQESSGFEADVAHISRQDTIGGSAGVNRFLSSLDVIKRLDDMIRQADIQITVSRLIAFSLGASLMAALAAYTAFGTITVI
Ga0182032_110233131	3300016357	Soil	MLISTAVLLFFLFLVYALFLLVSRKSEARGVLLQQRVAEALQGLKSPDEAIQISREDSIGGVPVINRLLSSVNFIRDLEWSIKQADMQITVSRLLMICFAAAVMAGLAAYT
Ga0136617_111559262	3300017789	Polar Desert Sand	MLISTVVFLFFLFLTYALFMLASRKSDARSERLQQRVAEALELQSSPEEFIAISREDSIGGYPTINRLLAPLNFVKNIDQ
Ga0184605_100280523	3300018027	Groundwater Sediment	MLISTIIFLFFLFATYALFLLASRKSDARDQRLDERVAEALRDSDAGSFEGEIRITRDDSIGGNPFINRLLSSLDFVKRLDLMIKQADVHTT
Ga0184633_101683611	3300018077	Groundwater Sediment	MLISTAVFLFFLFLVYALFLLASRKSDARDERLEQRVAEALRESEGGSFEGEIQITRDDSIGGNPTINRLLSSLDFVKRLDLMIKQADVHTTVSRLLGFSAVAGLMAGLAASTVVNSIS
Ga0184627_101596191	3300018079	Groundwater Sediment	MLISTAVFLFFLFLVYALFLLASRKSDARDERLEQRVAEALRESEGGSFEGEIQITRDDSIGGNPTINRLLSSLDFVKRLDLMIKQADVHTTVSRLLGFSAVAGLMAGLAASTVV
Ga0190274_111008541	3300018476	Soil	MLITVIFLFFLFLTYALFIVASRKSDARDERLKHRVAEALRESDSAYEGEVHITRADSIGGNPLINRLLSKLDF
Ga0190274_120644972	3300018476	Soil	MLLSTLIFLFFLFLTYALFLLTSRKADARQMRLQKRVAEALQDFSEQDGEITISREDTIGGNRTVNKVLS
Ga0193739_10399521	3300020003	Soil	VLISTVIFLFFLFLTYALFMVASRKADARDERLEQRVAEALRESGSVYEGEVHITRADSIGGNPLINRLLSKLDFVKRLERMIAQADVHTTVSRLLGFCAV
Ga0182009_106574662	3300021445	Soil	MLLSTVIFVFFLFLTYALFLLASRKSDARGRRLEQRVAKALQETNSPDALVQISRDDSIGGTAAINQLLSSLNFVKRLDQNIRQ
Ga0207660_110759842	3300025917	Corn Rhizosphere	MLLSTVIFLFFLFLTYALFLMASRKSDARQARLQQRVSEALQEAPNRPIEEAIQITRQDSISRNPTLKRFLSPLNAINKLDRTLRQADMQITVSRLLGFCFLAALMAAFAAYTVFNL
Ga0207646_110388831	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDARQERLQQRLAEALQDSSGSGSSNDVVQISREDTIGGNPAINRLLSSLDFIKKLDQVIRQADSRITV
Ga0207650_105338702	3300025925	Switchgrass Rhizosphere	MLISTVIFLFFLFLTYALFLLVSRKSDARDQRLEQRVAEALQDSDGAAFEGEVRITRADSIGGNPIINRVLSSLDFVKRLDLMIKQAD
Ga0207686_114918171	3300025934	Miscanthus Rhizosphere	MLISTVIFLFFLFLTYALFLMASRKSDAREQRLEERVAEALRDSDSTAFEGEVRITRDDSIGGNPIINRLLSSLDFVK
Ga0207640_109681322	3300025981	Corn Rhizosphere	MFLSLSTLIFLFFLLLTYALFLFASRKSDARQVRLQQRVAEALQDNSELTLEQSIQITRDDSISSNPTLNRLLSRLNFVKQLDSLIQQAD
Ga0207648_100639641	3300026089	Miscanthus Rhizosphere	MFLSLSTLIFLFFLLLTYALFLFASRKSDARQVRLQQRVAEALQDNSELTLEQSIQITRDDSISSNPTLNRLLSRLNFVK
Ga0207648_118907441	3300026089	Miscanthus Rhizosphere	MLISTIIFLFFLFLTYGLFLIASRQSDARDERLQKRVAEVLRDSNSVYEGEIQITRADSIGGNPLIHRILSSLDFV
Ga0207675_1008730341	3300026118	Switchgrass Rhizosphere	MLISTTIFLFFLFLTYALFLLASRKSDARYSRLQQRVAEALQDSEKTTQEPVQISRGDSIGGSETINKLLSSLDFVKKLDQMIGQADVHITVSRLLTFS
Ga0207675_1026274241	3300026118	Switchgrass Rhizosphere	VLISTLIFLFFLFLTYALFLIATRKSDARSERLQQRVSEALQEKLASSDAEVQISRVDSIGGSPSINRLLSSINFIKSLDQTIRQADVQITVSRLLGFS
Ga0209131_13249621	3300026320	Grasslands Soil	MLISTTVFLFFLFLVYALFLMASRKSDARQERLQKRVAEALRGLSSSDDEPVQISRDDSIGGHPVINQLLSSL
Ga0209464_103980791	3300027778	Wetland Sediment	MLISTFVFLFFLFLVFALFLLASRKSEAREARLEQRVAEALQGLRPSDDPIQISRDDSIGRNPTISRLLSSINVIKRIDRMIRQADVGITVSRLLTFCFFSGLLAGFAAYTILNVLFAFAFALVVGVAPILHIAWKRHKRLLKF
Ga0209798_100060068	3300027843	Wetland Sediment	MLISTFVFLFFLFLTLALYLLASRKSDARQVRLQQRVAQALQDLDGSNESVQIAREDTIGGSPLINRLLTSLDFVRKLDGMLRQADLQITVSRLLAFC
Ga0207428_107466061	3300027907	Populus Rhizosphere	MLLSTVIFLFFLFLTYALFLMASRKSDARQARLQQRVSEALQEAPNRPIEEAIQITRQDSISRNPTLHRLLSPLDVINKLDRTLRQADMQITVSRLLGFCFLAALMAAFAAYTVFNLPSV
Ga0209382_114979492	3300027909	Populus Rhizosphere	MLISTVVFLFFLFLTYAIFLLTSRKADARDIQLQKRVAEALQDFGSQEDIQIYRDDTIGGSPAINRILSSLDFIRKLDQFIRQAGVRIT
Ga0268265_111917002	3300028380	Switchgrass Rhizosphere	MLISTTIFLFFLFLTYALFLLGSRKSDARDQRLEERVAEALREDGALLDGEIQITRNDSIGGNPLVNRILSSLDFVKRLDLMIKQADVHTTVSRLLGFSIVAGLMAGLAASTVVNPVS
Ga0310813_107419961	3300031716	Soil	MLISTTIFLFFLFLTYALFLLGSRKSDARDQRLEERVAEALREDGALFDGEIQITRNDSIGGNPLVNRILSSLDFVKRLDLMIKQADVRTTVSRLLGFSIVAGLMAGLAGSTVVNPVSAFVLAIVGAALPMLHVARKRRL
Ga0310813_109163272	3300031716	Soil	MLLSTVIFVFFLFLTYALFLLASRKSDARGRRLEQRVAKALQETTSPDALVQISRDDSIGGTAAINQLLSSLNFVKRLDQNIRQADMQITVIRLLMFCLLAGLAGGLAASTVLG
Ga0307468_1000549331	3300031740	Hardwood Forest Soil	MLISTVIFLFFLFLTYAIFLLASRKSDARDQRLEQRVAEVLRGLDDAAFEGEVEIT
Ga0307413_105404281	3300031824	Rhizosphere	MLISTLIFLFFLFLTYAVFLLTSRKADLRHMRLQKRVAEALQDFGSQDHEMQITREDTIGGSPAINRILSSL
Ga0307416_1006287831	3300032002	Rhizosphere	MLISTVVFLFFLFLTYAAFLAASRKSDARQARLEQRVAEALEAATSADGTVQISREDSIGGPEAVNRLLSSLDFAKKLDQLIRQADIQITVTRLLMFCAVAGFLAGLATYTVAN
Ga0307414_104282442	3300032004	Rhizosphere	MFLSLWTLIFLFFLFLTYALFLMGSRKADARQARLQQRVAEALQENSELTLEQTIQITRDDSISSNPTLNRLLSPLNFVKRLDNLLQQADLQITVSRLLTFCLIAGVMAGLASY
Ga0307470_106082032	3300032174	Hardwood Forest Soil	MLISTTVFLFFLFLVYALFLMASRKSDARQERLQKRVAEALRGLSSSDDEPVQISRDDSIGGHPLVNQLLS
Ga0307471_1037014202	3300032180	Hardwood Forest Soil	MLISTFIFLFFLFLTYALFLLASRKADAREKRLEERVAEALRESDAAFEGEVRITREDSIGGNA
Ga0310810_107148751	3300033412	Soil	MLISTTIFLFFLFLTYALFLLGSRKSDARDQRLEERVAEALREDGALFDGEIQITRNDSIGGNPLVNRMLSSLDFVKRLDLMIKQADVRTTVSRLLGFSIVAGLMAGLAGS
Ga0364942_0189809_281_670	3300034165	Sediment	MLISTVVFLFFLFLTFALFLIATRKSDARQVRLQQRVAQALQDFQPSDDFVQIAREDSIGGHPAINRLLSSLDFIKKLDRMIRQADLEITVSRLLLFCFFAGVLAGLAAYTVLNFLFALVFAFLAGVAPM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072674

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences