Metagenome / Metatranscriptome Family F072688

Basic Information
Family ID	F072688
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	62 residues
Representative Sequence	VSALSWGFVAVGVIALCVLVGLSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKERGPWAKENSDS
Number of Associated Samples	100
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.87 %
% of genes near scaffold ends (potentially truncated)	25.62 %
% of genes from short scaffolds (< 2000 bps)	83.47 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (61.983 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.703 % of family members)
Environment Ontology (ENVO)	Unclassified (29.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.636 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.32% β-sheet: 0.00% Coil/Unstructured: 44.68%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF14026	DUF4242	53.72
PF08031	BBE	4.96
PF01638	HxlR	4.13
PF09851	SHOCT	1.65
PF00501	AMP-binding	0.83
PF01341	Glyco_hydro_6	0.83
PF11755	DUF3311	0.83
PF00732	GMC_oxred_N	0.83
PF13632	Glyco_trans_2_3	0.83
PF17032	zinc_ribbon_15	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	4.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	4.13
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.83
COG5297	Cellulase/cellobiase CelA1	Carbohydrate transport and metabolism [G]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
All Organisms	root	All Organisms	38.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
cellular organisms	root	All Organisms → cellular organisms	38.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Thermocrispum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Thermocrispum municipale	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum municipale	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102GQ9BO	Not Available	514	Open in IMG/M
2189573004\|GZGWRS402I10N4	Not Available	531	Open in IMG/M
2199352025\|deepsgr__Contig_84838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101567686	Not Available	852	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101568343	Not Available	620	Open in IMG/M
3300004633\|Ga0066395_10270926	Not Available	918	Open in IMG/M
3300004633\|Ga0066395_10397703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300005105\|Ga0066812_1021698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300005168\|Ga0066809_10202875	Not Available	537	Open in IMG/M
3300005172\|Ga0066683_10517967	Not Available	728	Open in IMG/M
3300005330\|Ga0070690_101657460	Not Available	519	Open in IMG/M
3300005332\|Ga0066388_102863799	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005332\|Ga0066388_103215051	Not Available	835	Open in IMG/M
3300005434\|Ga0070709_11638019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum municipale	524	Open in IMG/M
3300005436\|Ga0070713_100905670	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005445\|Ga0070708_101267789	Not Available	689	Open in IMG/M
3300005458\|Ga0070681_10360432	Not Available	1364	Open in IMG/M
3300005568\|Ga0066703_10376007	Not Available	852	Open in IMG/M
3300005713\|Ga0066905_100071881	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300005764\|Ga0066903_100091367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4049	Open in IMG/M
3300005764\|Ga0066903_103459388	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005764\|Ga0066903_106212481	Not Available	624	Open in IMG/M
3300006031\|Ga0066651_10531910	Not Available	623	Open in IMG/M
3300006046\|Ga0066652_100316334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1393	Open in IMG/M
3300006057\|Ga0075026_100458311	Not Available	727	Open in IMG/M
3300006173\|Ga0070716_100104673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1742	Open in IMG/M
3300006572\|Ga0074051_11536102	Not Available	805	Open in IMG/M
3300006573\|Ga0074055_11518932	Not Available	501	Open in IMG/M
3300006573\|Ga0074055_11870286	Not Available	954	Open in IMG/M
3300006574\|Ga0074056_11735183	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300006575\|Ga0074053_11817484	Not Available	1174	Open in IMG/M
3300006580\|Ga0074049_13181605	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006755\|Ga0079222_10563299	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006804\|Ga0079221_10039269	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300006806\|Ga0079220_10163171	Not Available	1244	Open in IMG/M
3300006854\|Ga0075425_100662583	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300006914\|Ga0075436_100157968	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300009176\|Ga0105242_11912805	Not Available	634	Open in IMG/M
3300009792\|Ga0126374_10000832	All Organisms → cellular organisms → Bacteria	8383	Open in IMG/M
3300009792\|Ga0126374_10264555	Not Available	1131	Open in IMG/M
3300009792\|Ga0126374_10586110	Not Available	820	Open in IMG/M
3300010043\|Ga0126380_10080362	Not Available	1885	Open in IMG/M
3300010046\|Ga0126384_10255305	Not Available	1419	Open in IMG/M
3300010047\|Ga0126382_11185585	Not Available	683	Open in IMG/M
3300010048\|Ga0126373_11609694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300010154\|Ga0127503_10062754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300010154\|Ga0127503_10938780	Not Available	884	Open in IMG/M
3300010358\|Ga0126370_10317648	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300010359\|Ga0126376_10440326	Not Available	1187	Open in IMG/M
3300010359\|Ga0126376_10683121	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300010359\|Ga0126376_11400337	Not Available	724	Open in IMG/M
3300010362\|Ga0126377_10012025	All Organisms → cellular organisms → Bacteria	6805	Open in IMG/M
3300010398\|Ga0126383_10104950	Not Available	2535	Open in IMG/M
3300010400\|Ga0134122_10657686	Not Available	978	Open in IMG/M
3300010401\|Ga0134121_10011367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	7077	Open in IMG/M
3300012198\|Ga0137364_10195742	Not Available	1480	Open in IMG/M
3300012198\|Ga0137364_10931308	Not Available	658	Open in IMG/M
3300012200\|Ga0137382_10028988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3283	Open in IMG/M
3300012201\|Ga0137365_10022773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4853	Open in IMG/M
3300012208\|Ga0137376_10998979	Not Available	717	Open in IMG/M
3300012211\|Ga0137377_10711703	Not Available	939	Open in IMG/M
3300012356\|Ga0137371_10218192	Not Available	1491	Open in IMG/M
3300012359\|Ga0137385_10814786	Not Available	775	Open in IMG/M
3300012519\|Ga0157352_1058406	Not Available	594	Open in IMG/M
3300012929\|Ga0137404_11180522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300012957\|Ga0164303_10224219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300012971\|Ga0126369_10550008	Not Available	1219	Open in IMG/M
3300012984\|Ga0164309_10682146	Not Available	813	Open in IMG/M
3300012986\|Ga0164304_11071417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300012987\|Ga0164307_11018683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300013296\|Ga0157374_10936366	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300015264\|Ga0137403_11259962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300015371\|Ga0132258_12058127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300015373\|Ga0132257_101698515	Not Available	809	Open in IMG/M
3300016294\|Ga0182041_11062342	Not Available	734	Open in IMG/M
3300016341\|Ga0182035_12187527	Not Available	501	Open in IMG/M
3300017939\|Ga0187775_10313439	Not Available	623	Open in IMG/M
3300017947\|Ga0187785_10015059	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300017959\|Ga0187779_10343625	Not Available	963	Open in IMG/M
3300017966\|Ga0187776_10024066	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300017966\|Ga0187776_10174325	Not Available	1338	Open in IMG/M
3300017999\|Ga0187767_10234997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300018032\|Ga0187788_10310200	Not Available	642	Open in IMG/M
3300018060\|Ga0187765_10159718	Not Available	1277	Open in IMG/M
3300018060\|Ga0187765_11333104	Not Available	510	Open in IMG/M
3300018089\|Ga0187774_10055550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1777	Open in IMG/M
3300018482\|Ga0066669_11798723	Not Available	566	Open in IMG/M
3300021420\|Ga0210394_10883307	Not Available	778	Open in IMG/M
3300021560\|Ga0126371_10273788	Not Available	1809	Open in IMG/M
3300021560\|Ga0126371_11265824	Not Available	872	Open in IMG/M
3300026095\|Ga0207676_12098167	Not Available	564	Open in IMG/M
3300027725\|Ga0209178_1387270	Not Available	529	Open in IMG/M
3300027874\|Ga0209465_10118752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1303	Open in IMG/M
3300028065\|Ga0247685_1053231	Not Available	506	Open in IMG/M
3300028784\|Ga0307282_10609517	Not Available	529	Open in IMG/M
3300028792\|Ga0307504_10356951	Not Available	565	Open in IMG/M
3300030969\|Ga0075394_10906810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300031231\|Ga0170824_100426629	Not Available	629	Open in IMG/M
3300031231\|Ga0170824_114123164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300031421\|Ga0308194_10053950	Not Available	1037	Open in IMG/M
3300031640\|Ga0318555_10355981	Not Available	793	Open in IMG/M
3300031680\|Ga0318574_10692476	Not Available	597	Open in IMG/M
3300031769\|Ga0318526_10247785	Not Available	729	Open in IMG/M
3300031831\|Ga0318564_10147437	Not Available	1049	Open in IMG/M
3300031890\|Ga0306925_11055595	Not Available	824	Open in IMG/M
3300032052\|Ga0318506_10100092	Not Available	1238	Open in IMG/M
3300032091\|Ga0318577_10277429	Not Available	802	Open in IMG/M
3300032770\|Ga0335085_10157353	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300032770\|Ga0335085_12214951	Not Available	552	Open in IMG/M
3300032783\|Ga0335079_10148363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2633	Open in IMG/M
3300032828\|Ga0335080_10493394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1301	Open in IMG/M
3300033158\|Ga0335077_10344983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1615	Open in IMG/M
3300033158\|Ga0335077_11385787	Not Available	678	Open in IMG/M
3300033806\|Ga0314865_015848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1867	Open in IMG/M
3300034818\|Ga0373950_0003329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2291	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.39%
Host-Associated	Host-Associated	6.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Plants	Host-Associated → Plants	6.61%
Aquatic	Environmental → Aquatic	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.88%
Loam	Environmental → Terrestrial → Soil → Loam	13.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_03277420	2170459002	Grass Soil	VVALCVLVGFSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS
FG2_00115550	2189573004	Grass Soil	ASPRTPAEGVVSALSWGFVAVGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKGSGDS
deepsgr_01236250	2199352025	Soil	VSALSWGFVAVGIVALCVLIGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS
INPhiseqgaiiFebDRAFT_1015676861	3300000364	Soil	VSALSWGFVAVGVVAFCALIALSLAFRLDFVLIGLFVVAALVATYIAGRMDKRKARGPWAKDNGDS*
INPhiseqgaiiFebDRAFT_1015683432	3300000364	Soil	GVVSALSWGFVAVGVVAFCALIALSLAFRLDFVLIGLMVVAALVATYIAGRLDKKKARGPWAKDPSDS*
Ga0066395_102709261	3300004633	Tropical Forest Soil	VSALSWGFVAVGAITIFALIALSLAFRLDFVLVGIVIVAALAATYLAGRMDKRKERGPWAKGNGDS*
Ga0066395_103977031	3300004633	Tropical Forest Soil	VALLLVIGVSLALKLDFVLIGLVVVAALVATYIAGRIDKRKERGPWAKENSDG*
Ga0066812_10216981	3300005105	Soil	AVGIVALCALIGIAVLFRLHFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0066809_102028751	3300005168	Soil	LCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDRSDS*
Ga0066683_105179671	3300005172	Soil	VSALSWGFIAVGVVVLCVLVGISLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKSGDS*
Ga0070690_1016574602	3300005330	Switchgrass Rhizosphere	VSALSWGLVVVGAVAVCALIGFSLAFRLDFVLIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0066388_1028637991	3300005332	Tropical Forest Soil	TPAEGVVSALSWGFVVVGAVALFLMIGISLAFHLDFVLIGLVVVGALVATYIAGRIDKRKERGPWAKENSDS*
Ga0066388_1032150512	3300005332	Tropical Forest Soil	VGAITIFALIALSLAFRLDFVLVGIVIVAALAATYLAGRMDKRKERGPWAKGNGDS*
Ga0066388_1066485002	3300005332	Tropical Forest Soil	VSAMSWGVIVAGVVALCALIAFALAFRLDFLMIGVVVAVALVATYLAGQMDKRKSRGPWAKEDGDS*
Ga0070709_116380191	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSALSWVFVAVGVIALCLVVGLSLAFKLDFVLIGLFVVAALVATYIAGRIDKRKERGPWAKENSDS*
Ga0070713_1009056702	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSALSWGFVVVGVIALCVLVGLSLAFRLDFVLIGLFVVAALAATYLAGRMDKRKERGPWAKGNGDS*
Ga0070708_1012677893	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0070681_103604323	3300005458	Corn Rhizosphere	VSALSWGLVVVGAVAVCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0066703_103760072	3300005568	Soil	VSALSWGFVAVGVVALCVLVGFSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0066905_1000718813	3300005713	Tropical Forest Soil	VSALSWGFVVVGGVAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKDPRDS*
Ga0066903_1000913672	3300005764	Tropical Forest Soil	VSALSWGFVAVGIVVLCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0066903_1034593883	3300005764	Tropical Forest Soil	VSARNWGLVVAGVVVLCLAIAFSLAFQLDFVLIGLIVVAALVATYIAGRIDKRKQRGPWANENSDG*
Ga0066903_1062124812	3300005764	Tropical Forest Soil	VSALSWGFVAVGAITIFALIAISLAFRLDFVLVGIVIVAALAATYLAGRMDKRKERGPWAKGNGDS*
Ga0066651_105319102	3300006031	Soil	VSALSWGFVVVGAIAVCVLIALSLAFRLDFVLIGLMVVAALAATYWAGRLDKRKARGPWAKGDGDS*
Ga0066652_1003163343	3300006046	Soil	VSALSWGFVVVGAIAVCVLIALSFAFRLDFVLIGLMVVAALAATYMAGRLDKRKARGPWAKGDGDS*
Ga0075026_1004583112	3300006057	Watersheds	VSALSWGFVVVGVISLCVLVGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0070716_1001046735	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GAVAVCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0074051_115361022	3300006572	Soil	VGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKGSGDS*
Ga0074055_115189323	3300006573	Soil	VSALSWGFVAVGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSR
Ga0074055_118702862	3300006573	Soil	VSALSWGFVAVGIVALCALIGIALLFKLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0074056_117351831	3300006574	Soil	VSALSWGFVAVGIVALCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKNPSDS*
Ga0074053_118174843	3300006575	Soil	VSALSWGFVAVGIVALCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0074049_131816052	3300006580	Soil	VSALSWVFIAVGVVALCLVVGLSLAFKLDFVLIGLFVVAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0074048_133385473	3300006581	Soil	CALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKNPSDS*
Ga0079222_105632991	3300006755	Agricultural Soil	VSALSWGFVAVGVIALCVLVGLSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKERGPWAKENSDS*
Ga0079221_100392691	3300006804	Agricultural Soil	VSALSWGFVIVGVIALCVLIGLSLAFRLDFVLIGLFVVAALAATYIAGRIDKRKERGPWAKGNGDS*
Ga0079220_101631711	3300006806	Agricultural Soil	PRTPAEGVVSALSWGLVVVGAVAVCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0075425_1006625833	3300006854	Populus Rhizosphere	VSALSWGFVAVGVVTFCALIALSLAFRLDFVLIGLFVVAALVATYIAGRMDKRKARGPWAKDNGDS*
Ga0075436_1001579681	3300006914	Populus Rhizosphere	RPAEGVVSALSWGFVAVGVVAFCALIALSLAFRLDFVLIGLFVVAALVATYIAGRMDKRKARGPWAKDNGDS*
Ga0105242_119128051	3300009176	Miscanthus Rhizosphere	VIALCLVVGLSLAFKLDFVLIGLFVVAALVATYIAGRIDKRKERGPWAKDNSDS*
Ga0126374_100008327	3300009792	Tropical Forest Soil	VSALSWGFVVVGGVAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0126374_102645553	3300009792	Tropical Forest Soil	VGAITIFALIAISLAFRLDFVLVGIVIVAALAATYLAGRMDKRKERGPWAKGNGDS*
Ga0126374_105861101	3300009792	Tropical Forest Soil	VVAGVVVFCLAIAFSLAFQLDFVLIGLIVVAALVATYIAGRIDKRKQRGPWANENSDG*
Ga0126380_100803622	3300010043	Tropical Forest Soil	VSWGVIVAGVVALCALIAFSLAFRLNYLMIGIVVAVALVGTYLAGQMDKRKSRGPWAKEDGDS*
Ga0126384_102553053	3300010046	Tropical Forest Soil	VSWGVIVAGVVALCALIAFALAFRLDFLMIGVVVAVALVATYLAGQMDKRKSRGPWAKEDGDS*
Ga0126382_106632412	3300010047	Tropical Forest Soil	VSWGVIVAGVVVLCALIAFSLAFRLDFLMIGIVVAVALVATYLAGQMDKRKSRGPWAKEDGDS*
Ga0126382_111855851	3300010047	Tropical Forest Soil	VGIVALCALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKDPRDS*
Ga0126373_116096942	3300010048	Tropical Forest Soil	VGAIAVCVLIALSLAFKLDFVLIGLMVVAALVATYIAGRLDKRKARAPWAKENGDS*
Ga0127503_100627541	3300010154	Soil	VSALSWGFVAVGVVALCVVIGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0127503_109387802	3300010154	Soil	VSALSWGFVAVGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKGSGDS*
Ga0126370_103176482	3300010358	Tropical Forest Soil	VGIVVLCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0126376_104403262	3300010359	Tropical Forest Soil	VVAGVVVLCLAIAFSLAFQLDFVLIGLIVVAALVATYIAGRIDKRKQRGPWANENSDG*
Ga0126376_106831212	3300010359	Tropical Forest Soil	VSALSWGFVVVGGVAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWA
Ga0126376_111679242	3300010359	Tropical Forest Soil	VSAASWGVIVAGVVALCALIAFSLAFRLNYLMIGIVVAVALVGTYLAGQMDKRKSRGPWAKEDGDS*
Ga0126376_114003371	3300010359	Tropical Forest Soil	VGGVAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKDPRDS*
Ga0126372_104398852	3300010360	Tropical Forest Soil	MSWGVIVAGVVALCALIAFALAFRLDFLMIGVVVAVALVATYLAGQMDKRKSRGPWAKEDGDS*
Ga0126377_100120256	3300010362	Tropical Forest Soil	VAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKDPSDS*
Ga0126383_101049502	3300010398	Tropical Forest Soil	VVAGVVVLCLAIAFSLAFRLDFVLIGLIVVAALVATYIAGQIDKRKSRGPWAKENSDS*
Ga0134122_106576861	3300010400	Terrestrial Soil	LVVVGAVAVCALIGFSLAFRLDFVLIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0134121_100113672	3300010401	Terrestrial Soil	VVVGAVAVCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0137364_101957421	3300012198	Vadose Zone Soil	VNALSWGFVAVGFVALCALIGFSLAFRLDFLLVGLMVVAALAATYIAGRIDKRKGRGPWAKDNGDS*
Ga0137364_109313082	3300012198	Vadose Zone Soil	VSALSWGFIAVGVVVLCVLVGISLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWANGSGDS*
Ga0137382_100289882	3300012200	Vadose Zone Soil	VGFVALCALIGFSLAFRLDFLLVGLMVVAALAATYIAGRIDKRKGRGPWAKDNGDS*
Ga0137365_100227738	3300012201	Vadose Zone Soil	VSALSWGFVAVGGVALCVLVGFSLAFRLDFVLIGLMVVAALGATYIAGRLDKRKSRGPWAKDNSDS*
Ga0137376_109989791	3300012208	Vadose Zone Soil	VGFVALCALIGFSLAFRLDFLLVGLMVVAALAATYIAGRIDKRKGRGPWAKDNGDG*
Ga0137377_107117031	3300012211	Vadose Zone Soil	VSALSWGFVAVGGVALCVVVGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0137371_102181922	3300012356	Vadose Zone Soil	VSALSWGFVAVGVVALCVLVGFSLAFRLDFVLIGLMVVAALGATYIAGRLDKRKSRGPWAKDNSDS*
Ga0137385_108147861	3300012359	Vadose Zone Soil	VSALSWGFIAVGVVVICVLVGISLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0157352_10584062	3300012519	Unplanted Soil	VVVGAVAVCALIGFSLAFRLDFVLIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0137404_111805221	3300012929	Vadose Zone Soil	FVAVGLVALCVLIGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0164303_102242192	3300012957	Soil	VVALCLVVGFSLAFKLDFVLIGLFVVAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0126369_105500083	3300012971	Tropical Forest Soil	VGAIAVCVLIALSLAFKLDFVLIGLMVVAALVATYIAGRLDKRKARGPWAKGNGDS*
Ga0164309_106821461	3300012984	Soil	VSALSWGFVAVGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0164304_110714171	3300012986	Soil	VVALCLVVGFSLAFKLDFVLIGLFVVAALVATYIAGRIDKRKERGPWAKENSDS*
Ga0164307_110186832	3300012987	Soil	VIALCLVVGLSLAFKLDFVLIGLFVVAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0157374_109363661	3300013296	Miscanthus Rhizosphere	VSALSWGLVVVGAVAVCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERGPSA
Ga0137403_112599622	3300015264	Vadose Zone Soil	SWGFVAVGLVALCVLIGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS*
Ga0132258_120581272	3300015371	Arabidopsis Rhizosphere	VSALSWGFVVVGVIALCVLIGLSLAFRLDFVLIGLFVVAALAATYLAGRIDKWKERGPWAKGNGDS*
Ga0132257_1016985153	3300015373	Arabidopsis Rhizosphere	PRTPAEGVVSALSWGLVVVGAVAVCALIGFSLAFRLDFVLIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS*
Ga0182041_110623421	3300016294	Soil	VSALSWGLAVGGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKG
Ga0182035_121875271	3300016341	Soil	VSALSWGLVVGGVVALCLVVGLSLAFRLDFVLIGLFVVAALVATYIAGRIDKRKERGPWAKENSDS
Ga0187775_103134391	3300017939	Tropical Peatland	VSALSWGFVAVGVVAFGALIGIALLFGLDFFLVGLMVVAALVVTYIAGRIDKKKAQGPWAKDGGES
Ga0187785_100150593	3300017947	Tropical Peatland	VSALSWGFVAVGIVVLCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDGSDS
Ga0187779_103436251	3300017959	Tropical Peatland	VVVGAIAVGVLIALSIAFKLDFVLIGLMVVAALAATYIAGRLDKRKARGPWAKENSDS
Ga0187776_100240663	3300017966	Tropical Peatland	VSALSWGFVAVGIVVLCALIGIALLFRLDFFLVGIMVVAALVATYIAGRIDKKKARGPWAKDPSDS
Ga0187776_101743252	3300017966	Tropical Peatland	VSALSWGFVVVGVVAFGALIGIALLFGLDFFLVGLMVVAALVVTYIAGRIDKKKAQGPWAKDGGES
Ga0187767_102349972	3300017999	Tropical Peatland	VVVGAIAVCVLVALSIAFKLDFVLIGLMVVAALAATYIAGRIDKRKERGPWAKENSDS
Ga0187788_103102001	3300018032	Tropical Peatland	VSALSWGFVAVGVIALCALIGFSLAFKLDFVLIGLIVVAALAATYIAGRIDKKKERGPWAKGNGDG
Ga0187765_101597181	3300018060	Tropical Peatland	ALSWGFVVVGAIAVCVLIALSIAFKLDFVLIGLMVVAALAATYIAGRLDKRKARGPWAKENSDS
Ga0187765_113331041	3300018060	Tropical Peatland	VSALSWGFVVVGGIAVCVLIAISLAFKLDFVLIGLMVVAALAATYIAGRIDKRKERGPWAKENSDS
Ga0187774_100555503	3300018089	Tropical Peatland	VSALSWGFVVVGVIALCALIVLSLAFRLDFVLIGLVVVAALAATYIAGRMDKRKERGPWAKGNGDS
Ga0066669_117987232	3300018482	Grasslands Soil	VSALSWGFIAVGVVVLCVLVGISLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKSGDS
Ga0210394_108833071	3300021420	Soil	VSALSWGFVAVGVIALCVLVALSLAFRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKGSGDS
Ga0126371_102737884	3300021560	Tropical Forest Soil	VSALSWGFVAVGAITIFALIAISLAFRLDFVLVGIVIVAALAATYLAGRMDKRKERGPWAKGNGDS
Ga0126371_112658241	3300021560	Tropical Forest Soil	GAIAVCVLIALSIAFKLDFVLIGLVVVAALVATYIAGRLDKRKERGPWAKGNSDS
Ga0207676_120981672	3300026095	Switchgrass Rhizosphere	VSALSWGLVVVGAVAVCALIGFSLAFRLDFVVIGVFVAAALAATYIAGRIDKRKERG
Ga0209178_13872702	3300027725	Agricultural Soil	VSALSWGFVAVGVVALCVLVTLSLVFRLDFVLIGLMVVAALAATYIAGRLDKRNSRGPWAKGSGDS
Ga0209465_101187521	3300027874	Tropical Forest Soil	VSALSWGFVVVGGVAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKD
Ga0247685_10532311	3300028065	Soil	GLVVVGAVAVCALIGFSLAFRLDFVLIGVFVAAALAATYIAGRIDKRKERGPWAKENSDS
Ga0307282_106095171	3300028784	Soil	VSALSWVFIAVGVVALCLVVGLSLAFKLDFVLIGLFVVAALAATYIAGRIDKRKERGPWAKENSDS
Ga0307504_103569512	3300028792	Soil	VSALSWGFVAVGVVALCVLVGFSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS
Ga0075394_109068101	3300030969	Soil	GVVSALSWGFAAVGVVALCVLVGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS
Ga0170824_1004266292	3300031231	Forest Soil	GVVSALSWVFIAVGVVALCLVVGLSLAFKLDFVLIGLFVVAALAATYVAGRIDKRKERGPWAKENSDS
Ga0170824_1141231642	3300031231	Forest Soil	VSALSWGFVAVGAVALCVVVGLSLAFKLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKDNSDS
Ga0308194_100539501	3300031421	Soil	VSALSWVFIAMGVVALCLVVGLSLAFKLDFVLIGLFVVAALAATYIAGRIDKRKERGPWAKENSDS
Ga0318555_103559811	3300031640	Soil	VSALSWGFVVVGAIAVCVLIALSFAFKLDFVLIGLMVVAALAATYIAGRLDKRKARGPWAKEGGDS
Ga0318574_106924762	3300031680	Soil	VSALSWGFVVVGVIALCVLVALSLALRLDFVLIGLMVVAALAATYIAGRLDKRKSRGPWAKGSGDS
Ga0318526_102477852	3300031769	Soil	VSALSWGFVVVGAIALFVLVGVSLAFKLDFILIGLMVVAALVATYIAGRLDKRKSRGPWAKEGSDS
Ga0318564_101474371	3300031831	Soil	LCVLVGVSLAFKLDFILIGLMVVAALVATYIAGRLDKRKSRGPWAKEGSDS
Ga0306925_110555951	3300031890	Soil	VIALCVLVGVSLAFKLDFVVIGLVVVAALVGTYIAGRLDKRKSRGPWAKEGSDS
Ga0318506_101000923	3300032052	Soil	MDKLAPVIALCVLVGVSLAFKLDFVVIGLVVVAALVGTYIAGRLDKRKARGPWAKEGGDS
Ga0318577_102774291	3300032091	Soil	VIALCVLVGVSLAFKLDFVVIGLVVVAALVGTYIAGRLDKRKARGPWAKEGGDS
Ga0335085_101573533	3300032770	Soil	VSALSWGFVVVGGVAFAALIGIALLFRLDFFLVGLMVVAALVATYIAGRIDKKKARGPWAKDPSDS
Ga0335085_122149512	3300032770	Soil	VSALSWGFVVVGAIAVCVLIALSIAFKLDFVLIGLMVVAALAATYIAGRLDKRKARGPWAKENSDS
Ga0335079_101483633	3300032783	Soil	VSALSWGFVVVGAIAVCVLIALSIAFRLDFVLIGLMVVAALAATYIAGRLDKRKARGPWAKENSDS
Ga0335078_110927753	3300032805	Soil	VCVLIALSIAFKLDFVLIGLMVVAALAATYIAGRLDKRKARGPWAKENSDS
Ga0335080_104933941	3300032828	Soil	VVAFGALIGIALLFGLDFFLVGLMVVAALVVTYIAGRIDKKKAQGPWAKDGGES
Ga0335077_103449833	3300033158	Soil	VGVIALCALIGFSLAFKLDFVLIGLIVVAALAATYIAGRIDKKKERGPWAKGNGEG
Ga0335077_113857872	3300033158	Soil	VSALSRGFVAVGAVAVCALIAVSLAFRLDFVLIGLFVVAALVATYIAGRIDKRKERGPWAKENSDS
Ga0314865_015848_572_736	3300033806	Peatland	VIALCALIGFSLAFKLDFVLIGLIVVAALAATYIAGRIDKKKERGPWAKGNGDG
Ga0373950_0003329_2062_2226	3300034818	Rhizosphere Soil	VIALCLVVGLSLAFKLDFVLIGLFVVAALVATYIAGRIDKRKERGPWAKENSDS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign