Metagenome / Metatranscriptome Family F072797

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072797
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	80 residues
Representative Sequence	ARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLG
Number of Associated Samples	106
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	28.10 %
% of genes from short scaffolds (< 2000 bps)	25.62 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.074 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.967 % of family members)
Environment Ontology (ENVO)	Unclassified (60.331 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.45% β-sheet: 0.00% Coil/Unstructured: 57.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00999	Na_H_Exchanger	40.50
PF13419	HAD_2	11.57
PF00155	Aminotran_1_2	2.48
PF01384	PHO4	0.83
PF03713	DUF305	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	40.50
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	40.50
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	40.50
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	40.50
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	40.50
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.83
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
All Organisms	root	All Organisms	28.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
cellular organisms	root	All Organisms → cellular organisms	28.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	13.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	13.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	13.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	13.22 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10118000	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	753	Open in IMG/M
3300002561\|JGI25384J37096_10137713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	795	Open in IMG/M
3300002562\|JGI25382J37095_10039997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1832	Open in IMG/M
3300005178\|Ga0066688_10510663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	773	Open in IMG/M
3300005437\|Ga0070710_10590324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300005536\|Ga0070697_101328419	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005559\|Ga0066700_10095511	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300005575\|Ga0066702_10561115	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300006163\|Ga0070715_10235332	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300006755\|Ga0079222_10855839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300006791\|Ga0066653_10306051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300006797\|Ga0066659_10253171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1319	Open in IMG/M
3300006954\|Ga0079219_11170141	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009089\|Ga0099828_10323390	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300009143\|Ga0099792_10373184	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010303\|Ga0134082_10002069	All Organisms → cellular organisms → Bacteria	7144	Open in IMG/M
3300010329\|Ga0134111_10045198	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300010336\|Ga0134071_10716988	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012202\|Ga0137363_10959685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300012356\|Ga0137371_10957548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300012972\|Ga0134077_10291252	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012976\|Ga0134076_10488709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300014157\|Ga0134078_10106653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1055	Open in IMG/M
3300015357\|Ga0134072_10002227	All Organisms → cellular organisms → Bacteria	3881	Open in IMG/M
3300018468\|Ga0066662_10122553	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300019789\|Ga0137408_1427436	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300025905\|Ga0207685_10163753	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300026014\|Ga0208776_1017558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300026300\|Ga0209027_1011189	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300026318\|Ga0209471_1278041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300026343\|Ga0209159_1029504	All Organisms → cellular organisms → Bacteria	2949	Open in IMG/M
3300027748\|Ga0209689_1138918	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300027846\|Ga0209180_10230182	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300028819\|Ga0307296_10438676	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031962\|Ga0307479_10921361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	845	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.43%
Loam	Environmental → Terrestrial → Soil → Loam	9.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	19.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.48%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10257662	3300002557	Grasslands Soil	DLARLDGLVSRLALGMTAGEELLLEELLARRAPLAVRDVLAWHEHLPPVASGTEAPQVELIAAVVLGEDHS*
JGI25385J37094_100099211	3300002558	Grasslands Soil	RQSDLGRLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPPQVELMAALVLG*
JGI25383J37093_101180001	3300002560	Grasslands Soil	QRDRLSRRLIPWVLVAARRAASRRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLG*
JGI25384J37096_101377132	3300002561	Grasslands Soil	RLSRRLIPWVLAAARRAATRRRHADLARLDGLVSRLALGMTAGEELRLDDLLARRAPLSVRDVLAWHERLPPLGAGTEAPRVELVAAILLG*
JGI25382J37095_100399971	3300002562	Grasslands Soil	LSRRLIPWVLAAARRAATERRHADLARLDGLVSRLALGMTAGEELLLEELLARRAPLAVRDVLAWHERLPPVASGTEAPQVELIAAVVLGEDHS*
JGI25382J37095_101017421	3300002562	Grasslands Soil	RLDALVSRLALGMSAGEELLLEELLARRGPLTVRDVLAWHERLPRLGTGAEAPQVELVAAIVLG*
JGI25382J43887_100743431	3300002908	Grasslands Soil	RRRHADLARLDGLVSRLARGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLGTGAEAPQVELVAAMVLG*
JGI25388J43891_10165081	3300002909	Grasslands Soil	ARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAAVSDPPAVRLEAALVLG*
JGI25389J43894_10652342	3300002916	Grasslands Soil	LDALVSRLALGMTAGEEALLDELLGRRAPLTVRDVLAWHERLPPPASAPDPPAVVLVAALVLG*
Ga0066672_107193352	3300005167	Soil	ARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSAPPAVRLEAALVLG*
Ga0066680_108683502	3300005174	Soil	RRAAQRREHAELARLDALISRLALGMTAGEELLLEDLLARGGPLAVGDVLAWHERLAPAAEGADAPGVQLVAAVVLRRPP*
Ga0066690_106432291	3300005177	Soil	VLAAARRAAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGLPDPPAVRLEAALVFG*
Ga0066688_105106622	3300005178	Soil	RRLIPWVLAAARRAAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGLPDPPAVRLEAALVFG*
Ga0066688_105106632	3300005178	Soil	RRLIPWVLAAARRAAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0066684_106995342	3300005179	Soil	RRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLG*
Ga0066685_107595682	3300005180	Soil	ARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLG*
Ga0066685_107947132	3300005180	Soil	RRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLSTGAEAPPVELVAAMVLG*
Ga0070710_105903242	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LSRRLIPWVLSAARRAAVQRRPAELHRLDELISRLALGMTAGEELLLEDLVTRRAALSVRDVLAWHERLRPPLATEDVAVPQVELVAAVVFGPA*
Ga0066689_100914451	3300005447	Soil	RRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS*
Ga0070697_1013284192	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RLIPWVLAAARRAATQRRHADLAHLDGLVSRLALGMTAGEELWLAELLARRGPLSVRDVLAWHERMPPVATCAEAPHVELIAAVVLGEGGHS*
Ga0066697_100169101	3300005540	Soil	RHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0070695_1005208622	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	RRQSDLARLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRMPPIGAGAEPPQVELMAALVFG*
Ga0066661_105443651	3300005554	Soil	ARRAAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSAPPAVRLEAALVLG*
Ga0066707_107609451	3300005556	Soil	ATRRRHADLARLDALVSRLALGMSAGEELLLEELLARRGPLTVRDVLAWHERLPRPGTGAEAPQVELVAAIVLG*
Ga0066704_100316131	3300005557	Soil	RAAQRREHAELARLDALISRLALGMTAGEELLLEDLLARGGPLAVGDVLAWHERLAPAAEGADAPGVQLVAAVVLRRPP*
Ga0066700_100955112	3300005559	Soil	RDRLGRRLIPWVLASARRAAQRREHAELARLDALVSRLALGMTAGEELLLEDLLARSGPLSVRDVLAWHEGLPPAGAGAGADAPGVQLVAAVVLRRPP*
Ga0066702_105611152	3300005575	Soil	RDRLSRRLIPWVLAAARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRQVLAWHERLPPLGTGAEAPHVELVAAMVLG*
Ga0075285_10223791	3300005890	Rice Paddy Soil	DRLDALVSRLALGMTAGEELGLEALVRGRSPLSVRDVLAWHERMPPLDAPEDAPGVALEAAIAFA*
Ga0066651_101497582	3300006031	Soil	RLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPPQVELMAALVLG*
Ga0070715_102353322	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RLSRRLIPWVLAAARRAATQRRHADLAHLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPVATGAEAPQVELVAAVVLG*
Ga0070716_1006926892	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LAHLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPVATGAEAPQVELVAAVVLG*
Ga0079222_108558392	3300006755	Agricultural Soil	DRDRLSRRLIPWVLSAARRAAVQRRPAELHRLDELVSRLALGMTAGEELLLEDLVTRRAALSVRDVLAWHERLRPPLATEDVAVPQVELVAAVVFGPA*
Ga0066653_103060512	3300006791	Soil	TAQRDRLSRRLIPWVLAAARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS*
Ga0066659_100935991	3300006797	Soil	AAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0066659_102531711	3300006797	Soil	DRPTRRLIPWVLAAARRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0079221_114540672	3300006804	Agricultural Soil	ELHRLDELVSRLALGMTAGEELLLEDLVTRRAALSVRDVLAWHERLRPPLATEDVAVPQVELVAAVVFGPA*
Ga0079219_111701412	3300006954	Agricultural Soil	WVLAAARRAAVQRRPAELLRLDGLVSRLALGMTAGEELLLEELVARRTTLSIRDVLAWHERLPPRHETHATPQIDLVTAVVFAPA*
Ga0099791_100904482	3300007255	Vadose Zone Soil	VSRLAFGMTAGEELGLEDLLARRAPLAVRDVLAWHERMPPVATAAEAPQVELIAAVVLGEGHS*
Ga0099791_102514372	3300007255	Vadose Zone Soil	VLAAARRAATERRHADLARLDGLVSRLALGMTAGEELWLEDLLARRAPLSVRDVLAWHERMPPVATCDEAPHVELIAAVVLG*
Ga0066710_1013554672	3300009012	Grasslands Soil	RPADLARFDGLVSRLAIGMTAGEELRLEDLLARRAPLSVRDVLAWHESLPPLGAGAEAPQVELVAAMVLG
Ga0099828_103233901	3300009089	Vadose Zone Soil	HRDRLSRRLIPWVLAAARRAATQRRHADLAHLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPLATGAEAPQVELVAAVVLG*
Ga0066709_1004173522	3300009137	Grasslands Soil	SAARRAATRRRHTDLARLDALVSRLALGMTAGEELLLEDLLARRAPLAVRDVLAWHERLPPVATGAEAPQVKLIAAIVLGEDHS*
Ga0066709_1006675152	3300009137	Grasslands Soil	VLAAARRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0066709_1043457962	3300009137	Grasslands Soil	ELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLVWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0099792_103731842	3300009143	Vadose Zone Soil	AHRDRLSRRLIPWVLAAARRAATERRHADLTRLDGLVSRLAFGMTAGEELGLEDLLARRAPLAVRDVLAWHERMPPVATAAEAPQVELIAAIVLGEGHS*
Ga0134082_100020691	3300010303	Grasslands Soil	LIPWVLAAARRAATERRQSDLARLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVRDVLAWHDRLPPIGAGAEPPQVELMAALVLG*
Ga0134109_100141683	3300010320	Grasslands Soil	WVLAAARRAAARRRHTELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0134067_100315462	3300010321	Grasslands Soil	LAAARRAAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLVWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0134067_102033181	3300010321	Grasslands Soil	LIPWVLAAARRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0134084_100554312	3300010322	Grasslands Soil	AARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0134064_100464161	3300010325	Grasslands Soil	ELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSDPPAVRLEAALVLG*
Ga0134064_101846921	3300010325	Grasslands Soil	RRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0134111_100451981	3300010329	Grasslands Soil	GAHRDRLSRRLIPWVLAAARRAATERRHADLARLDGLVSRLALGMTAGEELLLEELLARRAPLAVRDVLAWHEHLPPVASGTEAPQVELIAAVVLGEDHS*
Ga0134063_100293272	3300010335	Grasslands Soil	VAARRAARQRRHVELDRLDALVSRLALGMTAGEELELEELVTRAAPLAVREVLAWHERLPPLAPDSAAPHLELVAALIVETA*
Ga0134063_101434812	3300010335	Grasslands Soil	LAAARRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0134071_107169881	3300010336	Grasslands Soil	HRDRLSRRLIPWVLAAARRAATERRHADLARLDGLVSRLALGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEAPQVDLIAAVALG*
Ga0134062_105199242	3300010337	Grasslands Soil	AAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG*
Ga0134066_104199991	3300010364	Grasslands Soil	SDLARLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPLQVELMAALVLG*
Ga0137392_101522862	3300011269	Vadose Zone Soil	FDCLVSRLALGMTAGEELWLEDLLARRAPLAVRDVLAWHERMPPVATAAEAPWVELIAAVVLGEGHS*
Ga0137383_100589041	3300012199	Vadose Zone Soil	VLAAARRAATERRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLAVRDVLALHERLPPVATDAEAPQVELIAAVVLSEDHS*
Ga0137382_112396901	3300012200	Vadose Zone Soil	AARRAATRRRHTDLARLDALVSRLALGMTAGEELLLEDLLARRAPLAVRDVLAWHERLPPVATGAEAPQVKLIAAIVLGEDHS*
Ga0137365_113438111	3300012201	Vadose Zone Soil	RRAAARRRHTDLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPVATDAEAPQVKLIAAVVLGEDHS*
Ga0137363_109596852	3300012202	Vadose Zone Soil	SRRLIPWVLAAGRRAATRRRHADLARLDALVSRLALGMSAGEELLLEELLARRGPLTVRDVLAWHERLPRLGTGAEAPQVELVAAIVLG*
Ga0137380_105017181	3300012206	Vadose Zone Soil	QSDLARLDGLVSRLAIGMTAGEELLLEDLLARRAPLAVRNVLAWHERLPPVATGAEAPQVELVAAVVLGEGHS*
Ga0137376_105220512	3300012208	Vadose Zone Soil	VAARRAARQRRHIELDRLDALVSRLALGMTAGEELELEELVTRAAPLAVREVLAWHERLPPLAPDSAAPHLELVAALIVETA*
Ga0137378_105894842	3300012210	Vadose Zone Soil	VLAAARRAATERRQSDLARLDGLVSRLAIGMTAGEELLLEDLLARRAPLAVRNVLAWHERLPPVATGAEAPQVELVAAVVLGEGHS*
Ga0137378_108664801	3300012210	Vadose Zone Soil	ATERRHADLARLDGLVSRLALGMTAGEELLLEELLARRAPLAVRDVLAWHEHLPPVASGTEAPQVELIAAVVLGEDHS*
Ga0137378_115077612	3300012210	Vadose Zone Soil	RRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHEALPPLYTGAEAPHVELVAAMVLG*
Ga0137370_101090271	3300012285	Vadose Zone Soil	DGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEAPQVELIAAVVLG*
Ga0137386_103105412	3300012351	Vadose Zone Soil	AATERRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLAVRNVLAWHERLPPVATGAEAPQVELVAAVVLGEGHS*
Ga0137366_110105781	3300012354	Vadose Zone Soil	LAAARRAAARRRHAELARLDALISRLALGMTAGEELLLADLLARRSSVSVRDVLAWHERLPPLGVAAQAPDVELVAAMVLG*
Ga0137371_109575482	3300012356	Vadose Zone Soil	RRLIPWVLAAARRAASRRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHEALPPLYTGAEAPHVELVAAMVLG*
Ga0137368_100248297	3300012358	Vadose Zone Soil	LDGLVSRLALGMTAGEELLLDDLLTRREPLAVRDLLAWHERLPPVQSEDAGAAVELVAVLQLSPGGARGVAHPESL*
Ga0137385_115791742	3300012359	Vadose Zone Soil	LAAARRAATERRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLAVRDVLALHERLPPVATDAEAPQVELIAAVVLSEDHS*
Ga0137360_105739441	3300012361	Vadose Zone Soil	TRRRHADLARLDALVSRLALGMSAGEELLLEELLARRGPLTVRDVLAWHERLPRLGTGAEAPQVELVAAIVLG*
Ga0137390_103152382	3300012363	Vadose Zone Soil	VLAAARRAATERRHADLTRLDGLVSRLAFGMTAGEELGLEDLLARRAPLAVRDVLAWHERMPPVATAAEAPQVELIAAIVLGEGHS*
Ga0134050_13703621	3300012407	Grasslands Soil	RLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEAPQVELMAALVLG*
Ga0137396_100829061	3300012918	Vadose Zone Soil	LDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDVLAWHERMPPLGAAAPAPQVELVAALVLG*
Ga0137413_112316972	3300012924	Vadose Zone Soil	LTAARRAATERRHADLARLDGLVSRLALGMTAGEELWLEDLLARRAPLAVRDVLAWHERMPPVATCDEAPHVELIAAVVLG*
Ga0134077_102912522	3300012972	Grasslands Soil	IPWVLAAARRAARRGEQVRLAHLDALVSRLAHGMTAGEELLLEDLLARRGPLSLRSVLRWHERLPPMAPEACAPRLQLVAAVTFRCRQ*
Ga0134110_100235971	3300012975	Grasslands Soil	ERRQSDLARLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPLQVELMAALVLG*
Ga0134110_102418861	3300012975	Grasslands Soil	ADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLSTGAEAPPVELVAAMVLG*
Ga0134076_104887092	3300012976	Grasslands Soil	RRLIPWVLAAARRAATERRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLAVRDVLAWHERLPPVATGAEAPQVELIAAVVLGEDHS*
Ga0134075_101654411	3300014154	Grasslands Soil	LAAARRAASRRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAAQVELVAAMVLG*
Ga0134078_101066531	3300014157	Grasslands Soil	LIPWVLAAARRAATRRRHADLARLDGLVSRLARGMTAGEELLLEDLLARRAPLSVRDVLAWHESLPPIGAGAEAPQVELVAAMVLG*
Ga0137405_13435391	3300015053	Vadose Zone Soil	WVLAAARRAAKRRRHADLARLDDLVSRLALGMTAGEELLLEDLLARRAPLSVRQVLAWHERLPPLGTGAEAPHVELVAAMVLG*
Ga0134072_100022275	3300015357	Grasslands Soil	AQRDRLSRRLIPWVLAVARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS*
Ga0134072_101719571	3300015357	Grasslands Soil	TERRQSDLARLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVRDVLAWHDRLPPIGAGAEPPQVELMAALVLG*
Ga0134069_12051502	3300017654	Grasslands Soil	RRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS
Ga0134112_102136991	3300017656	Grasslands Soil	AARRAATERRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLAVRDVLAWHERLPPVATGAEAPQVELIAAVVLGEDHS
Ga0066667_110669722	3300018433	Grasslands Soil	RAAARRRPADLARFDGLVSRLALGMTAGEERRLEDLLARRAPLAVRDVLAWHESLPPLGAGAEAPQVELVAAMVLG
Ga0066662_101225532	3300018468	Grasslands Soil	GRRLIPWVLASARRAAQRREHAELARLDALVSRLALGMTAGEELLLEDLLARSGPLSVRDVLAWHEGLPPAGAGADAPGVQLVAAVVLRRPP
Ga0066669_100591571	3300018482	Grasslands Soil	ARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS
Ga0137408_14274361	3300019789	Vadose Zone Soil	GTDSVRRLIPWVLAAARRAATQRRHADLAHLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPLATGAEAPQVELVAAVVLG
Ga0207653_100592631	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	HTGLARLDALVSRLALGMTAGEEVLLEELLGRRAPLTVRDVLAWHERLPPPAGVPDPPVIALEAALVLG
Ga0207685_101637532	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRVNRPDSGETDVRNSRRAATQRRHADLAHLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPVATGAEAPQVELVAAVVLG
Ga0207646_105360131	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AVQRRPAELRRLDELVSRLALGMTAGEELLLEDLVTRRAALSVRDVLAWHERLRPPLPTEDVAVPQVELVAAVVFGPA
Ga0208776_10175582	3300026014	Rice Paddy Soil	DRDRLSRRLIPWVLAAARRAAARRAIADLDRLDALVSRLALGMTAGEELGLEALLRGRSPLSVRDVLAWHERMPPLDAPEDAPGVALEAAIAFA
Ga0209350_11044681	3300026277	Grasslands Soil	ELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG
Ga0209234_10467622	3300026295	Grasslands Soil	RRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG
Ga0209237_10462071	3300026297	Grasslands Soil	AAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVPDPPAVRLEAALVLG
Ga0209027_10111891	3300026300	Grasslands Soil	DRLSRRLIPWVLAAARRAATERRQSDLARLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPPQVELMAALVLG
Ga0209469_10180583	3300026307	Soil	RLDGLVSRLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPPQVELMAALVLG
Ga0209265_12342932	3300026308	Soil	PWVLAAARRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG
Ga0209686_10129191	3300026315	Soil	RLIPWVLAAARRAAARRRHSELARLDALVSRLALGMTAGEEVLLDELLGRRAPLTVRDVLAWHERLPPPAGVSDPPAVRLEAALVLG
Ga0209471_12780411	3300026318	Soil	RRLIPWVLTAARRAAARRRHTELARLDALVSRLALGMTAGEEVLLDELLGRRTPLTVRDVLAWHERLPPPADVPDPPVIALEAALVLG
Ga0209802_10978481	3300026328	Soil	VLSAARRAAVQRRPAELHRLDELVSRLALGMTAGEELLLEDLVTRRAALSVRDVLAWHERLRPPLATEDVAVPQVELVAAVVFGPA
Ga0209803_12818982	3300026332	Soil	RRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS
Ga0209159_10295041	3300026343	Soil	TAQRDRLSRRLIPWVLAAARRAAARRRHADLARLDGLVSRLALGMTAGEELLLEDLLARRAPLSVRDVLAWHERLPPLYTGAEAPQVELVAAMVLS
Ga0209059_11095801	3300026527	Soil	RLAIGMTAGEELRLEDLLARRAPLSVREVLAWHDRLPPIGAGAEPLQVELMAALVLG
Ga0209807_10929361	3300026530	Soil	AARRAATRRRHADLARLDDLVSRLALGMTAGEELLLEDLLARRAPLSVRQVLAWHERLPPLGTGAEAPHVELVAAMVLG
Ga0209156_100142886	3300026547	Soil	LIPWVLAAARRAAARRRHTELARLDALVSRLALGMTAGEELLLEQLLERRAPLTVRDVLAWHERLPPCAGVPDPPAVLLEAALVLG
Ga0208997_10039644	3300027181	Forest Soil	RRHADLARLDALVSRLALGMTAGEELLLEDLLARRGPLSVRDVLAWHERLPPPGADSEAPQVELVAAIVLG
Ga0209106_10769042	3300027616	Forest Soil	IPWVLTAARRAATRRRHADLARLDALVSRLALGMTAGEELLLEDLLARRGPLSVRDVLAWHERLPPPGADSEAPQVELVAAIVLG
Ga0208981_10379212	3300027669	Forest Soil	LARLDALVSRLALGMTAGEELLLEDLLARRGPLSVRDVLAWHERLPPPGADSEAPQVELVAAIVLG
Ga0209689_11389181	3300027748	Soil	RDRLGRRLIPWVLASARRAAQRREHAELARLDALVSRLALGMTAGEELLLEDLLARSGPLSVRDVLAWHEGLPPAGAGAGADAPGVQLVAAVVLRRPP
Ga0209180_102301822	3300027846	Vadose Zone Soil	RLIPWVLAAARRAATQRRHADLARLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPLATGAEAPQVELVAAVVLG
Ga0209180_105048031	3300027846	Vadose Zone Soil	ERRHADLTRLDGLVSRLAFGMTAGEELGLEDLLARRAPLAVRDVLAWHERMPPVATAAEAPQVELIAAVVLGEGHS
Ga0209283_107555461	3300027875	Vadose Zone Soil	QRRHADLAHLDGLVSRLALGMTAGEELRLEDLLARRAPLSVRDLLAWHERLPPLATGAEAPQVELVAAVVLG
Ga0307296_104386761	3300028819	Soil	LSRRLIPWVLAAARRAAVRRRHAELARLDGLVSRLTPGMTAGEELLLEDLLARRSPLSLGDVLAWHERLPPLEADVGAPHVELVAAMALG
Ga0307479_109213612	3300031962	Hardwood Forest Soil	DRLSRRLIPWVLSAARQAAVQRRPAELRRLDELVSRLALGMTAGEELLLEDLVTRRAALSVRDVLAWHERLRPPLPTEDVAVPQVELVAAVVFGPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072797

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences