Metagenome Family F072860

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072860
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	42 residues
Representative Sequence	MSAQARKIVHEAIPQWAEGLYYNKGLFSEALVYYDDEAI
Number of Associated Samples	37
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.44 %
% of genes near scaffold ends (potentially truncated)	67.77 %
% of genes from short scaffolds (< 2000 bps)	89.26 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (66.116 % of family members)
Environment Ontology (ENVO)	Unclassified (66.116 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.595 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.36% β-sheet: 0.00% Coil/Unstructured: 71.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01966	HD	10.74
PF00990	GGDEF	9.09
PF00436	SSB	3.31
PF00353	HemolysinCabind	2.48
PF07676	PD40	1.65
PF11387	DUF2795	1.65
PF09954	DUF2188	1.65
PF00989	PAS	0.83
PF05532	CsbD	0.83
PF06441	EHN	0.83
PF03816	LytR_cpsA_psr	0.83
PF12680	SnoaL_2	0.83
PF16472	DUF5050	0.83
PF07228	SpoIIE	0.83
PF00571	CBS	0.83
PF13612	DDE_Tnp_1_3	0.83
PF01609	DDE_Tnp_1	0.83
PF00589	Phage_integrase	0.83
PF01565	FAD_binding_4	0.83
PF07995	GSDH	0.83
PF13508	Acetyltransf_7	0.83
PF08734	GYD	0.83
PF13231	PMT_2	0.83
PF14224	DUF4331	0.83
PF07366	SnoaL	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	3.31
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	3.31
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.83
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	0.83
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.83
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.83
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.83
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.83
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.83
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.83
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.83
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.20 %
Unclassified	root	N/A	42.98 %
Viruses	superkingdom	All Organisms → Viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.20 %
Unclassified	root	N/A	42.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %
Dictyoglomi	phylum	All Organisms → cellular organisms → Bacteria → Dictyoglomi	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.14 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	6.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Dictyoglomia	class	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	15.70 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	6.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Dictyoglomales	order	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	15.70 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	6.61 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.48 %
Dictyoglomaceae	family	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae	0.83 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	15.70 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	6.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Dictyoglomus	genus	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae → Dictyoglomus	0.83 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	6.61 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	4.13 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	3.31 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	3.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.83 %
Dictyoglomus	genus	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae → Dictyoglomus	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	6.61 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	4.13 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	3.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Microvirga sp. VF16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	0.83 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.83 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	0.83 %
Dictyoglomus	genus	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae → Dictyoglomus	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_105018107	Not Available	741	Open in IMG/M
3300004016\|Ga0058689_10185584	Not Available	501	Open in IMG/M
3300005562\|Ga0058697_10254689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	819	Open in IMG/M
3300005562\|Ga0058697_10616039	Not Available	569	Open in IMG/M
3300005562\|Ga0058697_10804009	Not Available	509	Open in IMG/M
3300006918\|Ga0079216_11461958	Not Available	569	Open in IMG/M
3300007790\|Ga0105679_10243711	Not Available	1052	Open in IMG/M
3300007790\|Ga0105679_10731054	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae → Dictyoglomus	1041	Open in IMG/M
3300007790\|Ga0105679_10735408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2187	Open in IMG/M
3300009789\|Ga0126307_10045409	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300009789\|Ga0126307_10150578	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300009789\|Ga0126307_10204752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1583	Open in IMG/M
3300009789\|Ga0126307_10218977	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300009789\|Ga0126307_10231460	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1485	Open in IMG/M
3300009789\|Ga0126307_10244481	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300009789\|Ga0126307_10251056	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300009789\|Ga0126307_10533982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	947	Open in IMG/M
3300009789\|Ga0126307_10548158	Not Available	933	Open in IMG/M
3300009789\|Ga0126307_10840577	Not Available	741	Open in IMG/M
3300009789\|Ga0126307_11142806	Not Available	630	Open in IMG/M
3300009789\|Ga0126307_11230346	Not Available	606	Open in IMG/M
3300009789\|Ga0126307_11319568	Not Available	584	Open in IMG/M
3300009840\|Ga0126313_10132600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1865	Open in IMG/M
3300009840\|Ga0126313_11004149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	683	Open in IMG/M
3300009840\|Ga0126313_11029689	Not Available	675	Open in IMG/M
3300009840\|Ga0126313_11375814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	584	Open in IMG/M
3300009840\|Ga0126313_11812725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	510	Open in IMG/M
3300010036\|Ga0126305_10060780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300010036\|Ga0126305_10078550	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300010036\|Ga0126305_10108994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300010036\|Ga0126305_10374354	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300010036\|Ga0126305_10421006	Not Available	883	Open in IMG/M
3300010036\|Ga0126305_10841613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	625	Open in IMG/M
3300010036\|Ga0126305_11216829	Not Available	520	Open in IMG/M
3300010037\|Ga0126304_10025465	All Organisms → cellular organisms → Bacteria	3429	Open in IMG/M
3300010037\|Ga0126304_10093896	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300010037\|Ga0126304_10231976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1211	Open in IMG/M
3300010037\|Ga0126304_10238742	Not Available	1194	Open in IMG/M
3300010037\|Ga0126304_10291908	Not Available	1079	Open in IMG/M
3300010037\|Ga0126304_10482162	Not Available	832	Open in IMG/M
3300010037\|Ga0126304_10544346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	781	Open in IMG/M
3300010037\|Ga0126304_10690967	Not Available	689	Open in IMG/M
3300010037\|Ga0126304_11239335	Not Available	512	Open in IMG/M
3300010038\|Ga0126315_10140015	Not Available	1424	Open in IMG/M
3300010038\|Ga0126315_10171118	Not Available	1296	Open in IMG/M
3300010038\|Ga0126315_10607180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	707	Open in IMG/M
3300010039\|Ga0126309_10044641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2091	Open in IMG/M
3300010039\|Ga0126309_10063867	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300010039\|Ga0126309_10153963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	1238	Open in IMG/M
3300010039\|Ga0126309_10362541	Not Available	857	Open in IMG/M
3300010039\|Ga0126309_10709478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	647	Open in IMG/M
3300010040\|Ga0126308_10037289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2756	Open in IMG/M
3300010040\|Ga0126308_10103444	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300010040\|Ga0126308_10111050	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300010040\|Ga0126308_10308845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1041	Open in IMG/M
3300010040\|Ga0126308_10415768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	899	Open in IMG/M
3300010040\|Ga0126308_10558978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	777	Open in IMG/M
3300010040\|Ga0126308_10698722	Not Available	697	Open in IMG/M
3300010040\|Ga0126308_10711679	Not Available	691	Open in IMG/M
3300010040\|Ga0126308_11077181	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010040\|Ga0126308_11193676	Not Available	538	Open in IMG/M
3300010041\|Ga0126312_10222043	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1323	Open in IMG/M
3300010041\|Ga0126312_10237433	Not Available	1279	Open in IMG/M
3300010041\|Ga0126312_10360350	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010041\|Ga0126312_10690883	Not Available	736	Open in IMG/M
3300010041\|Ga0126312_10884123	Not Available	651	Open in IMG/M
3300010041\|Ga0126312_11209290	Not Available	557	Open in IMG/M
3300010042\|Ga0126314_10109778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1884	Open in IMG/M
3300010042\|Ga0126314_10616400	Not Available	792	Open in IMG/M
3300010042\|Ga0126314_10667888	Not Available	760	Open in IMG/M
3300010044\|Ga0126310_10232556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1233	Open in IMG/M
3300010044\|Ga0126310_10278940	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300010044\|Ga0126310_10349820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1036	Open in IMG/M
3300010045\|Ga0126311_10021482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3838	Open in IMG/M
3300010045\|Ga0126311_10185562	All Organisms → Viruses → Predicted Viral	1507	Open in IMG/M
3300010045\|Ga0126311_11019867	Not Available	677	Open in IMG/M
3300010166\|Ga0126306_10084749	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300010166\|Ga0126306_10122499	All Organisms → cellular organisms → Bacteria → Proteobacteria	1904	Open in IMG/M
3300010166\|Ga0126306_10186381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1560	Open in IMG/M
3300010166\|Ga0126306_10254220	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1342	Open in IMG/M
3300010166\|Ga0126306_10397293	Not Available	1078	Open in IMG/M
3300010166\|Ga0126306_10443405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	1020	Open in IMG/M
3300010166\|Ga0126306_10460054	Not Available	1002	Open in IMG/M
3300010166\|Ga0126306_10780160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300010166\|Ga0126306_11680417	Not Available	530	Open in IMG/M
3300014487\|Ga0182000_10139800	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300018465\|Ga0190269_10320245	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300018465\|Ga0190269_11920672	Not Available	511	Open in IMG/M
3300018466\|Ga0190268_10297641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	966	Open in IMG/M
3300018466\|Ga0190268_11212367	Not Available	627	Open in IMG/M
3300018466\|Ga0190268_11718355	Not Available	560	Open in IMG/M
3300018469\|Ga0190270_13023889	Not Available	532	Open in IMG/M
3300018920\|Ga0190273_11695782	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300019377\|Ga0190264_10343259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	933	Open in IMG/M
3300019377\|Ga0190264_11045053	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300019767\|Ga0190267_11513700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	518	Open in IMG/M
3300028578\|Ga0272482_10014728	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300030510\|Ga0268243_1074740	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300030511\|Ga0268241_10184061	Not Available	524	Open in IMG/M
3300031548\|Ga0307408_100166736	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300031548\|Ga0307408_101680004	Not Available	605	Open in IMG/M
3300031548\|Ga0307408_102141012	Not Available	540	Open in IMG/M
3300031731\|Ga0307405_10364305	Not Available	1120	Open in IMG/M
3300031824\|Ga0307413_11646835	Not Available	571	Open in IMG/M
3300031852\|Ga0307410_11694640	Not Available	560	Open in IMG/M
3300031901\|Ga0307406_10995336	All Organisms → cellular organisms → Bacteria → Terrabacteria group	719	Open in IMG/M
3300031901\|Ga0307406_11064319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	697	Open in IMG/M
3300031995\|Ga0307409_100886369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300031995\|Ga0307409_101078606	Not Available	824	Open in IMG/M
3300031995\|Ga0307409_101268558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	761	Open in IMG/M
3300032002\|Ga0307416_100099096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2530	Open in IMG/M
3300032005\|Ga0307411_10396620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	1139	Open in IMG/M
3300032005\|Ga0307411_11391217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	642	Open in IMG/M
3300032126\|Ga0307415_100169540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1701	Open in IMG/M
3300032126\|Ga0307415_100675445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	929	Open in IMG/M
3300032126\|Ga0307415_100774838	Not Available	873	Open in IMG/M
3300032159\|Ga0268251_10470443	Not Available	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	18.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.82%
Plants	Host-Associated → Plants	18.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.05%
Phylloplane	Host-Associated → Plants → Phylloplane	3.31%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.05%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.31%
Sand	Environmental → Terrestrial → Soil → Sand	2.48%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	76.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.05%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.31%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	66.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	14.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1050181071	3300001431	Soil	LSEQPQKVKKGAIPEWAEGLYYNKGIFSEVLVYYDDES
Ga0058689_101855841	3300004016	Agave	MSEQARKVKNKAIPEWAEGFYYDSGMFSEILVYHDDESIYIE
Ga0058697_102546891	3300005562	Agave	MSAQARKIEHEAIPQLAEGLYYNKGLTSEALVYYDDEAI
Ga0058697_106160392	3300005562	Agave	MSAQARKIVHEAIPQWAEGLYYNKGLFSEALVYYDDEAI*
Ga0058697_108040091	3300005562	Agave	MSEQARGIKHEAIPQWAQGLYYDAGMFTEVLIYYDDEALFLEHRGRE
Ga0079216_114619582	3300006918	Agricultural Soil	MMAEQARKIKHKAIPEWAEGLYYNQGIFSEALVYHDDESIYFEC
Ga0105679_102437112	3300007790	Soil	MSEQARKIEHEAVPQRAEGLYYNKGLSSEALLYYDDEVS*
Ga0105679_107310542	3300007790	Soil	MSEQARKIEHEAIPQRAEGLYYNNKGLSSEALVYYEAI*
Ga0105679_107354082	3300007790	Soil	MSTQVSKVKNKAIPEWGEGLYYNKGLFSEVHLYHDDLA*
Ga0126307_100454095	3300009789	Serpentine Soil	MITEQARKIKHKAIPEWAEGLYYNKGIFSEILVYHDDESVY
Ga0126307_101505782	3300009789	Serpentine Soil	MSAQARKIEHEAIPQLAEGLYYHKELSSVALVYYDDEAI*
Ga0126307_102047522	3300009789	Serpentine Soil	MSEQAQKVRNRAIPEWAEGLYYNKGLFSEALVYYDDEALYFEVRGKDSG
Ga0126307_102189773	3300009789	Serpentine Soil	MSEQARRVRNEAIPQWAEGLYYNKGLFDEALVYYDDEALYFE
Ga0126307_102314601	3300009789	Serpentine Soil	MTTTEQARKIKHKAIPEWAEGLYYNKGIFSEALVYHDDESIYFECRGKDDGVVRYTFEMM
Ga0126307_102444812	3300009789	Serpentine Soil	MSAQARKIEHEAIPQLAEGLYYNKGLSSEALVYYDDEAS*
Ga0126307_102510561	3300009789	Serpentine Soil	MSAQARKIEHEAIPQRAEGLYYNKGLSSEALIYYDDEAS*
Ga0126307_105339823	3300009789	Serpentine Soil	MSEQARKVKHEAIPQWAEGLYYNKGLFDEAVIYYDDE
Ga0126307_105481581	3300009789	Serpentine Soil	MSEQARKIEHEAIPQGAQGLYYNKGLFSEVLAYYDD
Ga0126307_108405771	3300009789	Serpentine Soil	MSEQARRVKHAAMQQWAEGLYYNKGIFSEALVYYDDEALYFEVR
Ga0126307_111428061	3300009789	Serpentine Soil	MMTEQAQKIKHKAVPEWAEGLYYNKGIFSEALVYHDDE
Ga0126307_112303461	3300009789	Serpentine Soil	MSEQARKIEHEAIPQGAQGLYYNKGLFSEVLAYYDDE
Ga0126307_113195682	3300009789	Serpentine Soil	VQLSEQAEQPKKVKKGAIPEWAEGLYYNKGIFSEVLVYYDDESIYFECRGK
Ga0126313_101326004	3300009840	Serpentine Soil	MSEQARKVKNENIPEWAEGLYYNKGIFNEILVYHDDESVYIEHKGK
Ga0126313_104117451	3300009840	Serpentine Soil	VKNEAIPEWAEGLYYNKGLFSEVLVYHDDESIYFEHRGKESG
Ga0126313_110041492	3300009840	Serpentine Soil	MRAQAHKIEHEAIPRWAEGLYYNKGLSSEALVYYNDEAS*
Ga0126313_110296891	3300009840	Serpentine Soil	MSEQAREVKQSAIPQWAEGLYYNKGLFSEALVYHDDSAVYFEVR
Ga0126313_113758142	3300009840	Serpentine Soil	MSAQARKIEHEAIPQLAEGLYYNKGLSSEALVYYDDKAI*
Ga0126313_118127252	3300009840	Serpentine Soil	MSEQARRVKAEAIPQWAEGLYYNKGLFDEAIVYYNDEAVYFETRG
Ga0126305_100607803	3300010036	Serpentine Soil	MSEQARKVKHEAIPQWAEGLFYNKGLFSEALIYYDDEALYFEVRG
Ga0126305_100785503	3300010036	Serpentine Soil	MITEQARKIKHKAIPEWAEGRYYNKGIFSEILGYHDDESVYI
Ga0126305_101089945	3300010036	Serpentine Soil	MSEQARKVRSEAVPQWAEGLYYNKGLFDEAVVYYDEEAVYFECRGKD
Ga0126305_103743541	3300010036	Serpentine Soil	MSEQAVRVKNKAIPEWAEGLYYNSGLFAEVLVYHDEESIYFEHK
Ga0126305_104210062	3300010036	Serpentine Soil	MSEQAQKVRNRAIPEWAEGLYYNKGLFSEALVYYDDEALYFEVRGK
Ga0126305_108416132	3300010036	Serpentine Soil	MSGQARKIVHEAIPQRAEGLYYSKGLSSEALAYYDDEAI*
Ga0126305_112168292	3300010036	Serpentine Soil	MSEQARRVKNKAVPQWAEGLYYNSGMFSEVLVYHDDEAIYFECRGRD
Ga0126304_100254655	3300010037	Serpentine Soil	MITEQARKIKHKAIPEWAEGLYYNKGIFSEILVYHDD
Ga0126304_100938962	3300010037	Serpentine Soil	MSEQARKVRSEAIPQWAEGLYYNKGLFDEAVIYYDDE
Ga0126304_102319762	3300010037	Serpentine Soil	MSEQARKVKKHIPEWAEGLYYNSGLISEVLVYYDDE
Ga0126304_102387423	3300010037	Serpentine Soil	MSEQARKVKHAAIPQWAEGLYYNKGLFNEALIYYDDEALY*
Ga0126304_102919082	3300010037	Serpentine Soil	MSEQTRRIRHEAIPEGAEGLYYNKGLFSEVLLYHD
Ga0126304_104821622	3300010037	Serpentine Soil	VGDRWVEASEQARKVKHEAIPQWAEGLYYNKGIFDEAVLYYDDE
Ga0126304_105443462	3300010037	Serpentine Soil	MSAQARKIEHEAIPQLAEGLYYNKELSSVALVYYDDEAI*
Ga0126304_106909671	3300010037	Serpentine Soil	MSEQAQKVRNRAIPEWAEGLYYNKGLFSEALVYYDD
Ga0126304_112393352	3300010037	Serpentine Soil	MSEQARKIEHEAIPQWAEGLYYNKGGIAEILVYYDDEALYV
Ga0126315_101400151	3300010038	Serpentine Soil	MSEQARRISHRAIPEWAEGLYYNSGMFSEILVYHDD
Ga0126315_101711182	3300010038	Serpentine Soil	MSEQARKVKHEAIPQWAEGLYYNKGIFDEAVLYYDD
Ga0126315_106071802	3300010038	Serpentine Soil	MSAQARKIEHEAIPQLAEGLYYNKGLSSEALVYYDDEAI*
Ga0126309_100446413	3300010039	Serpentine Soil	MMTEQARNIKHKAIPEWAEGLYYNKGIFSEILVYHEDESVYIEHK
Ga0126309_100638672	3300010039	Serpentine Soil	MRAQAHKIEHEAIPQWAEGLYYNKGLSSEALVYYDDEAS*
Ga0126309_101539631	3300010039	Serpentine Soil	MSEQARKIRHKAMPEWAEGLYYNSGMFHEVLVYHDDESIYIEHR
Ga0126309_103625411	3300010039	Serpentine Soil	MSEQARKIEHEAIPQGAQGLYYNKGLFSEVLAYYDDEALYFECRG
Ga0126309_107094781	3300010039	Serpentine Soil	MSAQARKIEHEAIPQWAEGLYYSKGLSCEALDYYGDEAS*
Ga0126308_100372893	3300010040	Serpentine Soil	MSEQARKIEHEAIPQWAEGLYYNNKGLSSEALVYYDDEAS*
Ga0126308_101034442	3300010040	Serpentine Soil	MSEQARKVKHEAIPQWAEGLYYNKGLFSEALVYYDDEALYFEVKGQDS
Ga0126308_101110502	3300010040	Serpentine Soil	MSEQARKIEHEAVPQPAEGLYYDNKGLSSEALVYYDDEAS*
Ga0126308_103088452	3300010040	Serpentine Soil	MSAQAREIEHEAIPEWAEGLYYSKGLSSEALLYYDDEAI*
Ga0126308_104157681	3300010040	Serpentine Soil	MSEQARKIEHEAIPQWAEGLYYNKGLFSEVLVYYDDNAL
Ga0126308_105589781	3300010040	Serpentine Soil	MSEQTRRIRHKAIPEGAEGLYYNKGLFSEALLYHDDEALYFE
Ga0126308_106987221	3300010040	Serpentine Soil	MSEQARKVKKEAIPQWAEGLYYNKGLFSEVLVYYDDEAVYFECRGKDGGI
Ga0126308_107116793	3300010040	Serpentine Soil	MSEQARKVKHEAIPQWAEGLYYNKGIFDEALVYYDDEALYFEV
Ga0126308_110771811	3300010040	Serpentine Soil	MSAQARKREHEAIPQLAEGLYYNKGLSSEALVYYDDEAS*
Ga0126308_111936761	3300010040	Serpentine Soil	MTTTEQAHKIKHKAVPEWAEGLYYNEGLYSEVLVYHDDEAIYLEHRGRNGGVVRF
Ga0126312_102220431	3300010041	Serpentine Soil	MMTEQARKIKHKAIPEWAEGLYYNKGIFSEALVYHDDESIYFECRGKDDGV
Ga0126312_102374331	3300010041	Serpentine Soil	MSEQVRKVKHEAIPWWAEGLYYNKGLFDEAVLYYDDDADFF*
Ga0126312_103603503	3300010041	Serpentine Soil	VQVSEQPDQPRKVRNEAIPDWAEGLYYNKGLFTEVLVY
Ga0126312_106908831	3300010041	Serpentine Soil	MSEQARKIEHEAIPQEAQGLYYNKGLFSEVLAYYDDEALYFECR
Ga0126312_108841231	3300010041	Serpentine Soil	MSAQARKIEHEAIPEWAEGLYYNNKGLSSEALVYYADEAI*
Ga0126312_112092901	3300010041	Serpentine Soil	MSEQAQKIEHEAIPQWAQGLYYNKGLYNEALIYHDDE
Ga0126314_101097781	3300010042	Serpentine Soil	MSEQARKIKHQAIPQWAEGLYYNKGLFNEALVYYDDEAL
Ga0126314_106164002	3300010042	Serpentine Soil	MSEQARKVRSEAIPQWAEGLYYNKGLFDEAVIYYDDEAL
Ga0126314_106678882	3300010042	Serpentine Soil	VEVRVGEMSEQARKVKYEAIPQWAEGLFYNKGLFKEALVYYDDDA
Ga0126314_112517032	3300010042	Serpentine Soil	MSEQPRKVKNEAIPEWAEGLYYNKGLFSEVLVYHDDESIYFE
Ga0126310_102325563	3300010044	Serpentine Soil	MSEQARKIRRHIPEWAEGLYYNAGIFSEALVYYDDEAIYF
Ga0126310_102789402	3300010044	Serpentine Soil	MSAQARKIVHEAIPQLAEGLYYNKGLSSEALVYYDDEAL*
Ga0126310_103498203	3300010044	Serpentine Soil	MTTEQARKIKHKAIPEWAEGLYYNKGIFNEILLYHD
Ga0126311_100214828	3300010045	Serpentine Soil	MSEQARKVRNEAIPQWAEGLYYNKGLFDEAVIYYDDE
Ga0126311_101855621	3300010045	Serpentine Soil	MSEQARKVKNKAIPEWAEGLYYNSGMFSEILVYHDDESIY
Ga0126311_110198672	3300010045	Serpentine Soil	MSEQARKISHRAIPEWAEGLYYNSGMFSEILVYHDDES
Ga0126306_100847491	3300010166	Serpentine Soil	MSEQARKVKKEAIPQWAEGLYYNKGLFTEVLVYYDDEAVYFECKGKD
Ga0126306_101224991	3300010166	Serpentine Soil	MMTEQAQKIKHKAVPEWAEGLYYNKGLFSEALVYHDDESIYFECRGKDSGVVRYTFQMI
Ga0126306_101863814	3300010166	Serpentine Soil	MITEQARKIKHRAIPEWAEGPYYNAGLYSGVLVYHHDEEAIYLEHKGRD
Ga0126306_102542201	3300010166	Serpentine Soil	MMTEQARKIKHKAIPEWAEGLYYNKGIFSEALVYHDDESI
Ga0126306_103662131	3300010166	Serpentine Soil	MMMTEQARKIKHKAIPEWAEGLYYNKGIFSEALVYHDEEAIYFECRGKEDGVVRYTF
Ga0126306_103972932	3300010166	Serpentine Soil	MMMTEQARKIKHKAIPEWAEGLYYNKGIFSEALVYHDDESI
Ga0126306_104434052	3300010166	Serpentine Soil	MSEQARKISHRAIPEWAEGLYYNSGMFSEILVYHDDESIYIE
Ga0126306_104600541	3300010166	Serpentine Soil	MSEQARKVRNEAIPQWAEGLYYNKGIFDEAVIYYDDEALYFE
Ga0126306_107494902	3300010166	Serpentine Soil	MITEQARKTKHKAIPEWAEGLYYNEGLYSEVLVYHDEEAIYLEHKGRENGVVRFTFDQ
Ga0126306_107801601	3300010166	Serpentine Soil	MSEQARKVKHEAIPQWAEGLYYNKGLFSEALIYYDDEALYFE
Ga0126306_116804171	3300010166	Serpentine Soil	LSDQAHNVKHEVVPQWAEGLYYKRGLFSEAMVYHNEDAIYFEVRTAA*
Ga0182000_101398002	3300014487	Soil	MSTQARKIEHEATPQLAEGLYYNKGLSSEALVYYDDEAI*
Ga0190269_103202452	3300018465	Soil	MSAQARKIAHEAIPQRAEGLYYNKGLSYEALVYYDDKAS
Ga0190269_119206722	3300018465	Soil	LSEQPGKVKKGAIPEWAEGLYYNKGIFSEVLVYYDDES
Ga0190268_102976413	3300018466	Soil	MSEQARKISHKAIPEWAQGLYYNSGLIKEVLVYHDDEAIY
Ga0190268_112123672	3300018466	Soil	MSEQARKISHKAIPGWAEGLYYNSGMFSEILVYHDDESIYIE
Ga0190268_117183551	3300018466	Soil	VRKEAIPQWAEGLYYNKGLFSEVRVYYDDEALLFREQG
Ga0190270_130238891	3300018469	Soil	MMTTEQAHKIKHKAVPEWAEGLYYNAGIFSEALVYHDDEAIYFECRGKED
Ga0190273_116957822	3300018920	Soil	RRGGPVEMSAQARKIVHEAIPQWAEGLYYSKGLSSEALAYYDDEAI
Ga0190264_103432592	3300019377	Soil	LSEQPGKVKKGAIPEWAEGLYYNKGIFSEVLVYYDDESIYFECRGK
Ga0190264_110450532	3300019377	Soil	MGAQAHKIEHEAIPQWAEGLYYNKGLSSEALVYYDDEAS
Ga0190267_115137001	3300019767	Soil	MSAQARKIVHEAIPQLAEGLYYNNRGLSSEALVYYDDEAI
Ga0272482_100147283	3300028578	Soil	MSAQARKIVHEAIPQCAEGLYYSKGLSSEALAYYDDEAS
Ga0268243_10747402	3300030510	Soil	MSTQARKIEHEATPQLAEGLYYNKGLSSEALVYYDDEAI
Ga0268241_101840611	3300030511	Soil	MNSMSEQAQGLRDEAIPESAEGIYFAKGVFEEALVYHDDEALYFEHK
Ga0307408_1001667363	3300031548	Rhizosphere	MSEQARKIEHEAIPQWAEGLYYNNKGLSSEALVYYDDEAS
Ga0307408_1016800042	3300031548	Rhizosphere	MSEQTRRIRHEAIPEGAEGLYYNKGLFSEVLLYHDD
Ga0307408_1021410122	3300031548	Rhizosphere	MSEQARKVKKEAIPQWAEGLYYNKGLFSEVLVYYDDEAVYFE
Ga0307405_103643051	3300031731	Rhizosphere	MSEQARKVRNEAIPQWAEGVYYNKSIFDEAVLYYDDEALYFEGQG
Ga0307413_116468352	3300031824	Rhizosphere	MSEQARKVKKEAIPQWAEGLYYNKGLFSEVLVYYDDEAVYFEC
Ga0307410_116946401	3300031852	Rhizosphere	MSEQARKVKHEAIPQWAEGLYYNKGLFNEAVVYYD
Ga0307406_109953361	3300031901	Rhizosphere	VEMSEQARKIEHEAIPQWAEGLYYNNKGLSSEALVYYDDEAS
Ga0307406_110643191	3300031901	Rhizosphere	MSEQAQKVRNEAIPPWAEGLFYNKGLFSEALIYHNDDALYFELR
Ga0307409_1008863693	3300031995	Rhizosphere	MSDQAHKAKHEAVPQWAEGLYYNNKGLFSEAMVYHTDNAIPFEVRG
Ga0307409_1010786061	3300031995	Rhizosphere	MSEQTRRIRHKAIPEGAEGLYYNKGLFSEALLYHDDEAL
Ga0307409_1012685582	3300031995	Rhizosphere	MSEQARKIEHEAIPQWADGLYYNNKGLSSEALVYYDDEAI
Ga0307416_1000990962	3300032002	Rhizosphere	MSDQAHKAKHEAVSQWAEGLYYNNKGLFSEAMVYHTDNAIPFEVRG
Ga0307411_103966201	3300032005	Rhizosphere	MSEQARKISHRAIPEWAEGLYYNSGMFSEILVYHDDE
Ga0307411_113912172	3300032005	Rhizosphere	MSEQARKIEHEAIPQWAEGLYYNNKGLSSEALVYYDDE
Ga0307415_1001695401	3300032126	Rhizosphere	YMSDQAHKAKHEAVSQWAEGLYYNNKGLFSEAMVYHTDNAIPFEVRG
Ga0307415_1006754451	3300032126	Rhizosphere	MGEQARKIKHKAIPEWAEGLYYNKGIFSEVLVYHDESLYREHKGK
Ga0307415_1007748381	3300032126	Rhizosphere	VSEQARQIKHEAIPQWAEGLYYNKGLFNEAVIYYDDE
Ga0268251_104704432	3300032159	Agave	MSEQARRVRHEAVPQWAEGIYYNKGLFDEALVYYDDEALY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072860

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences