Metagenome / Metatranscriptome Family F072866

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	50 residues
Representative Sequence	MVYNLNWQPNAGNFQEYSYETEWLECDWKYVHDTLHLVTAFWYPWIDT
Number of Associated Samples	64
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.88 %
% of genes near scaffold ends (potentially truncated)	33.06 %
% of genes from short scaffolds (< 2000 bps)	65.29 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (68.595 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (50.413 % of family members)
Environment Ontology (ENVO)	Unclassified (55.372 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.430 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.37% β-sheet: 0.00% Coil/Unstructured: 77.63%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08291	Peptidase_M15_3	6.61
PF00293	NUDIX	4.13
PF05050	Methyltransf_21	4.13
PF12849	PBP_like_2	3.31
PF13578	Methyltransf_24	2.48
PF01050	MannoseP_isomer	1.65
PF06714	Gp5_OB	1.65
PF05118	Asp_Arg_Hydrox	1.65
PF00463	ICL	1.65
PF07087	DUF1353	1.65
PF00226	DnaJ	1.65
PF01106	NifU	0.83
PF13489	Methyltransf_23	0.83
PF09148	DUF1934	0.83
PF05226	CHASE2	0.83
PF13759	2OG-FeII_Oxy_5	0.83
PF16653	Sacchrp_dh_C	0.83
PF09116	gp45-slide_C	0.83
PF05488	PAAR_motif	0.83
PF04304	DUF454	0.83
PF13640	2OG-FeII_Oxy_3	0.83
PF00166	Cpn10	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2224	Isocitrate lyase	Energy production and conversion [C]	1.65
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	1.65
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2832	Uncharacterized membrane protein YbaN, DUF454 family	Function unknown [S]	0.83
COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.83
COG4506	Uncharacterized beta-barrel protein YwiB, DUF1934 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
All Organisms	root	All Organisms	31.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
cellular organisms	root	All Organisms → cellular organisms	22.31 %
Viruses	superkingdom	All Organisms → Viruses	9.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.53 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.09 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	3.31 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3.31 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.48 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.48 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.83 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.83 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3.31 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	2.48 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2.48 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.83 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.48 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	2.48 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1.65 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	1.65 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.83 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2.48 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.48 %
Candidatus Pelagibacter sp. IMCC9063	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1.65 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1.65 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.83 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001419\|JGI11705J14877_10095986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	882	Open in IMG/M
3300001419\|JGI11705J14877_10104114	Not Available	830	Open in IMG/M
3300004097\|Ga0055584_101863559	Not Available	618	Open in IMG/M
3300005512\|Ga0074648_1019231	All Organisms → cellular organisms → Bacteria	3907	Open in IMG/M
3300005512\|Ga0074648_1055988	Not Available	1661	Open in IMG/M
3300005512\|Ga0074648_1090076	All Organisms → Viruses → Predicted Viral	1115	Open in IMG/M
3300005611\|Ga0074647_1000841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15074	Open in IMG/M
3300005611\|Ga0074647_1005591	All Organisms → cellular organisms → Bacteria	2924	Open in IMG/M
3300005934\|Ga0066377_10000398	Not Available	9857	Open in IMG/M
3300006027\|Ga0075462_10133005	Not Available	764	Open in IMG/M
3300006392\|Ga0075507_1495464	Not Available	508	Open in IMG/M
3300006400\|Ga0075503_1058315	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	3140	Open in IMG/M
3300006403\|Ga0075514_1947300	Not Available	1216	Open in IMG/M
3300006637\|Ga0075461_10070272	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300006637\|Ga0075461_10104165	Not Available	891	Open in IMG/M
3300006637\|Ga0075461_10145468	Not Available	728	Open in IMG/M
3300006802\|Ga0070749_10011577	Not Available	5684	Open in IMG/M
3300006802\|Ga0070749_10014070	All Organisms → cellular organisms → Bacteria	5113	Open in IMG/M
3300006802\|Ga0070749_10030876	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3346	Open in IMG/M
3300006802\|Ga0070749_10034472	Not Available	3135	Open in IMG/M
3300006802\|Ga0070749_10051357	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2511	Open in IMG/M
3300006802\|Ga0070749_10131708	Not Available	1464	Open in IMG/M
3300006802\|Ga0070749_10151459	All Organisms → Viruses → Predicted Viral	1348	Open in IMG/M
3300006802\|Ga0070749_10154585	Not Available	1332	Open in IMG/M
3300006802\|Ga0070749_10214394	Not Available	1099	Open in IMG/M
3300006802\|Ga0070749_10350241	Not Available	821	Open in IMG/M
3300006802\|Ga0070749_10519878	Not Available	647	Open in IMG/M
3300006867\|Ga0075476_10027272	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300006868\|Ga0075481_10136492	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300006868\|Ga0075481_10162265	Not Available	810	Open in IMG/M
3300006869\|Ga0075477_10427684	Not Available	513	Open in IMG/M
3300006916\|Ga0070750_10109580	Not Available	1274	Open in IMG/M
3300006916\|Ga0070750_10209271	Not Available	860	Open in IMG/M
3300007234\|Ga0075460_10142789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300007234\|Ga0075460_10214841	Not Available	650	Open in IMG/M
3300007538\|Ga0099851_1012345	Not Available	3494	Open in IMG/M
3300007538\|Ga0099851_1033677	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2045	Open in IMG/M
3300007538\|Ga0099851_1171702	Not Available	800	Open in IMG/M
3300007538\|Ga0099851_1361087	Not Available	505	Open in IMG/M
3300007539\|Ga0099849_1208313	Not Available	733	Open in IMG/M
3300007540\|Ga0099847_1020138	Not Available	2176	Open in IMG/M
3300007541\|Ga0099848_1024849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2528	Open in IMG/M
3300007541\|Ga0099848_1030457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2251	Open in IMG/M
3300007541\|Ga0099848_1044697	Not Available	1802	Open in IMG/M
3300007542\|Ga0099846_1173719	Not Available	768	Open in IMG/M
3300008012\|Ga0075480_10001759	Not Available	13804	Open in IMG/M
3300009000\|Ga0102960_1220396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	674	Open in IMG/M
3300009001\|Ga0102963_1211492	Not Available	772	Open in IMG/M
3300010296\|Ga0129348_1173512	Not Available	740	Open in IMG/M
3300010297\|Ga0129345_1115559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	986	Open in IMG/M
3300010297\|Ga0129345_1200676	Not Available	708	Open in IMG/M
3300010300\|Ga0129351_1022842	Not Available	2592	Open in IMG/M
3300010316\|Ga0136655_1153007	Not Available	688	Open in IMG/M
3300010318\|Ga0136656_1249141	Not Available	585	Open in IMG/M
3300010354\|Ga0129333_10978621	Not Available	712	Open in IMG/M
3300012504\|Ga0129347_1252283	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300012963\|Ga0129340_1192183	Not Available	531	Open in IMG/M
3300017949\|Ga0181584_10005090	Not Available	9928	Open in IMG/M
3300017950\|Ga0181607_10163283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1341	Open in IMG/M
3300017956\|Ga0181580_10114559	Not Available	1961	Open in IMG/M
3300017956\|Ga0181580_10508150	Not Available	787	Open in IMG/M
3300017962\|Ga0181581_10631351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	650	Open in IMG/M
3300017967\|Ga0181590_10014310	Not Available	6451	Open in IMG/M
3300017967\|Ga0181590_10041846	All Organisms → cellular organisms → Bacteria → Proteobacteria	3674	Open in IMG/M
3300017969\|Ga0181585_10311866	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300018080\|Ga0180433_10360479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1131	Open in IMG/M
3300018080\|Ga0180433_10683441	Not Available	764	Open in IMG/M
3300020159\|Ga0211734_10893936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	722	Open in IMG/M
3300021378\|Ga0213861_10562538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	530	Open in IMG/M
3300021425\|Ga0213866_10018595	Not Available	4159	Open in IMG/M
3300021957\|Ga0222717_10268813	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	984	Open in IMG/M
3300021957\|Ga0222717_10561361	Not Available	605	Open in IMG/M
3300021958\|Ga0222718_10228151	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300021958\|Ga0222718_10548929	Not Available	550	Open in IMG/M
3300021959\|Ga0222716_10045403	Not Available	3133	Open in IMG/M
3300021959\|Ga0222716_10128996	Not Available	1674	Open in IMG/M
3300021959\|Ga0222716_10154523	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300021959\|Ga0222716_10371070	Not Available	840	Open in IMG/M
3300021959\|Ga0222716_10596288	Not Available	604	Open in IMG/M
3300021960\|Ga0222715_10050771	All Organisms → cellular organisms → Bacteria → Proteobacteria	2864	Open in IMG/M
3300021960\|Ga0222715_10095704	Not Available	1928	Open in IMG/M
3300021960\|Ga0222715_10185390	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300021960\|Ga0222715_10234072	Not Available	1078	Open in IMG/M
3300021960\|Ga0222715_10355899	Not Available	814	Open in IMG/M
3300021961\|Ga0222714_10010302	Not Available	8076	Open in IMG/M
3300021961\|Ga0222714_10015046	Not Available	6306	Open in IMG/M
3300021961\|Ga0222714_10028423	Not Available	4208	Open in IMG/M
3300021961\|Ga0222714_10045087	All Organisms → Viruses → Predicted Viral	3113	Open in IMG/M
3300021961\|Ga0222714_10107286	Not Available	1753	Open in IMG/M
3300021961\|Ga0222714_10214997	Not Available	1100	Open in IMG/M
3300021961\|Ga0222714_10508984	Not Available	616	Open in IMG/M
3300021961\|Ga0222714_10682341	Not Available	503	Open in IMG/M
3300021961\|Ga0222714_10688027	Not Available	500	Open in IMG/M
3300021962\|Ga0222713_10264541	Not Available	1113	Open in IMG/M
3300022198\|Ga0196905_1019367	Not Available	2143	Open in IMG/M
3300022198\|Ga0196905_1084488	Not Available	861	Open in IMG/M
3300022198\|Ga0196905_1101607	Not Available	767	Open in IMG/M
3300022200\|Ga0196901_1025109	Not Available	2363	Open in IMG/M
3300022200\|Ga0196901_1025271	Not Available	2354	Open in IMG/M
3300022200\|Ga0196901_1031248	Not Available	2075	Open in IMG/M
3300023116\|Ga0255751_10027729	All Organisms → cellular organisms → Bacteria → Proteobacteria	4213	Open in IMG/M
3300025630\|Ga0208004_1135812	Not Available	546	Open in IMG/M
3300025646\|Ga0208161_1012189	All Organisms → Viruses	3521	Open in IMG/M
3300025646\|Ga0208161_1151302	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300025647\|Ga0208160_1019197	Not Available	2187	Open in IMG/M
3300025647\|Ga0208160_1026012	Not Available	1807	Open in IMG/M
3300025647\|Ga0208160_1027719	Not Available	1738	Open in IMG/M
3300025751\|Ga0208150_1105736	Not Available	917	Open in IMG/M
3300025759\|Ga0208899_1032333	Not Available	2432	Open in IMG/M
3300025759\|Ga0208899_1168191	Not Available	730	Open in IMG/M
3300025769\|Ga0208767_1102420	Not Available	1143	Open in IMG/M
3300025769\|Ga0208767_1212494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	639	Open in IMG/M
3300025818\|Ga0208542_1010804	Not Available	3197	Open in IMG/M
3300025828\|Ga0208547_1008601	Not Available	4707	Open in IMG/M
3300025889\|Ga0208644_1014053	All Organisms → cellular organisms → Bacteria	5300	Open in IMG/M
3300025889\|Ga0208644_1220877	Not Available	806	Open in IMG/M
3300027896\|Ga0209777_10164134	Not Available	1818	Open in IMG/M
3300027917\|Ga0209536_100617587	Not Available	1349	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	89.26%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	9.09%
Freshwater	Environmental → Aquatic → Freshwater	1.65%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	57.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.09%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	7.44%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.65%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.65%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.83%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	57.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.09%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.31%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	2.48%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	1.65%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	50.41%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	19.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	9.09%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.79%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	2.48%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.65%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.65%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	1.65%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	1.65%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.65%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.83%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.83%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006392	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300012504	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012963	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019267	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11705J14877_100959864	3300001419	Saline Water And Sediment	NFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
JGI11705J14877_101041143	3300001419	Saline Water And Sediment	NKLMTHTDPNAGNFQEYTYEYEWIECYWKNVYKTIHLVTAFTYPWLTVKY*
Ga0055584_1018635592	3300004097	Pelagic Marine	MNKPEGYNAGNFQEYTYECEWLECDWKIVYGTFNLVTAFWYPWIRINYE*
Ga0074648_10192313	3300005512	Saline Water And Sediment	MTELFPNSGNFQEYTYECEWIECYWKQVYDMTNLVTAFTFPWIKITY*
Ga0074648_10559887	3300005512	Saline Water And Sediment	MAHTYHLNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0074648_10900762	3300005512	Saline Water And Sediment	MTHTDPNAGNFQEYTYEYEWIECYWKNVYKTIHLVTAFTYPWLTVKY*
Ga0074647_10008414	3300005611	Saline Water And Sediment	MTTWHLNYYPNAGNFQEYDYECEWLECDWKIVYGTFNLVTAFWYPWIRINYS*
Ga0074647_10055912	3300005611	Saline Water And Sediment	MTHTDPNAGNFQEYTYECEWIECYWKNVYKTIHLVTAFTYPWLTVKY*
Ga0066377_1000039817	3300005934	Marine	MYYLNWEPNAGNFQEYSYETEWLECSWKHVHKTFHLVTAFWYPWIKVEDYGL*
Ga0075462_101330051	3300006027	Aqueous	MAKTYALNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0075507_14954641	3300006392	Aqueous	PQYNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0075503_10583159	3300006400	Aqueous	MHNLNWIPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFMYPWIRIKYD*
Ga0075514_19473004	3300006403	Aqueous	MVYNLNWQPNAGNLQEYTYECEWMECEWKHVHDTIHLVTAFCYPWIDIKYE*
Ga0075461_100702721	3300006637	Aqueous	YETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0075461_101041652	3300006637	Aqueous	MTHKLNWTPNEGNFQEYPYETEWLECSWINVYDMTRLVTSFWYPWLKI*
Ga0075461_101454681	3300006637	Aqueous	IMSYRLNWIPNEGNFQEYPYETEWLECEWKSIYDMTRLVTAFWYPWIRI*
Ga0070749_100115778	3300006802	Aqueous	MDLKYLNAGNFQEYTYECEWMECEWKLVHGTIHLVTAYTMPWLHIRP*
Ga0070749_1001407011	3300006802	Aqueous	MRHKLNWIPNEGNFQEYTYETEWLECSWINVYDMTRLVTAFWYPWLKI*
Ga0070749_100308766	3300006802	Aqueous	MTHTLNWQPNAGNFQEYTYECEWTECSWKHVHNTVHLVTAFMYPWLKVTYE*
Ga0070749_100344723	3300006802	Aqueous	MTHTLNWQPNAGNFQEYTYECEWIECEWKLVHDTIHLVTAFCYPWIKINIQA*
Ga0070749_100513572	3300006802	Aqueous	MYHLNWTPNAGNFQEYSYETEWLECDWKFVHDTLHLVTAFWYPWIKVDYDKF*
Ga0070749_101317082	3300006802	Aqueous	MSYRLNWIPNEGNFQEYPYETEWLECEWKSIYDMTRLVTAFWYPWIRI*
Ga0070749_101514592	3300006802	Aqueous	MTHTLNWQPNAGNFQEYTYECEWTECSWKHVHNTVHLVTAFMYPWLKVTYGKDKLICK
Ga0070749_101545851	3300006802	Aqueous	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAFC
Ga0070749_102143941	3300006802	Aqueous	MAHTYHLNWLPNAGNFQEYSYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0070749_103502413	3300006802	Aqueous	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAFCYPWINISYK*
Ga0070749_105198781	3300006802	Aqueous	MVYKLNWQPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0070749_105774652	3300006802	Aqueous	MTHTDYNAGNFQEYTYECEWMECEWKLIHKTIHLVTAFTYPWLDIKY*
Ga0075476_100272723	3300006867	Aqueous	MNKEEGYNAGNFQEYTYECEWMECDWKMVYGTFNLVTAFWYPWIRINYE*
Ga0075481_101364922	3300006868	Aqueous	MVYNLNWQPNAGNLQEYTYECEWMECDWKIVYGTFNLVTAFMYPWIRIKYD*
Ga0075481_101622652	3300006868	Aqueous	MTKEEGYNAGNFQEYTYELEWMECDWKIVYGTFNLVTAFFYPWILYNNK*
Ga0075477_104276842	3300006869	Aqueous	MTTWHLNYYPNAGNFQEYDYECEWLECDWKIVYGTFNLVTAFWYPWIRINYPN*
Ga0070750_101095801	3300006916	Aqueous	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAFCYPWINI
Ga0070750_102092711	3300006916	Aqueous	SMTTWHLNYYPNAGNFQEYDYECEWLECDWKIVYGTFNLVTAFWYPWIRINYS*
Ga0075460_101427893	3300007234	Aqueous	PNAGNFQEYDYECEWLECDWKIVYGTFNLVTAFWYPWIRINYPN*
Ga0075460_102148413	3300007234	Aqueous	MTTWHLNYYPNAGNFQEYDYECEWLECDWKIVYGTFNLVTAFWYPWIRI
Ga0099851_10123457	3300007538	Aqueous	MYNLNWIPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFMYPWIRIKYD*
Ga0099851_10336777	3300007538	Aqueous	MYNLNWIPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFMY
Ga0099851_11717023	3300007538	Aqueous	MYKLNWQPNEGNFQEYSYDTEWLECEWKKVYDMTRLVTAFWYPW
Ga0099851_13610871	3300007538	Aqueous	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAFCY
Ga0099849_12083134	3300007539	Aqueous	NAGNFQEYPYETEWLECDWKFVHDTLHLVTAFWYPWIDTSSYKYNI*
Ga0099847_10201384	3300007540	Aqueous	MVYKLNWQPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSS
Ga0099848_10248495	3300007541	Aqueous	MTHTLNWQPNAGNFQEYTYECEWMECYWNQVYKTIHLVTAFTYPWLQIK*
Ga0099848_10304574	3300007541	Aqueous	MSTFHLEHLPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFWYPWIRINYS*
Ga0099848_10446973	3300007541	Aqueous	MYKLNWQPNEGNFQEYSYETEWLECEWKKVYDMTRLVTAFWYPWLKIA*
Ga0099846_11737192	3300007542	Aqueous	MAHTYHLNWQPNAGNFQEYPYETEWLECDWKYVHDTIHLV
Ga0075480_1000175910	3300008012	Aqueous	MNKEEGYNAGNFQEYTYECEWIECDWKMVYGTFNLVTAFWYPWIRINYE*
Ga0102960_12203962	3300009000	Pond Water	VCHINKRMTHTDPNAGNFQEYTYECEWLECYWKNVYKTIHLVTAFTYPWLTVKY*
Ga0102963_12114922	3300009001	Pond Water	MVTEIKPNAGNFQEYTYECEWLECYWKNVYKTIHLVTAFTYPWLTVKY*
Ga0129348_11735121	3300010296	Freshwater To Marine Saline Gradient	MAHTYHLNWLPNAGNFQEYPYETEWLECDWKFVHDTVHLVTAFWYP
Ga0129345_11155594	3300010297	Freshwater To Marine Saline Gradient	MAHTYHLNWLPNAGNFQEYPYETEWLECDWKFVHDTVHLVTAFWYPWIKVDYDYYK*
Ga0129345_12006761	3300010297	Freshwater To Marine Saline Gradient	NAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI*
Ga0129351_10228424	3300010300	Freshwater To Marine Saline Gradient	MTHTLNWQPKAGNFQEYTYECEWTACSWKHVHNTVHLVTAFMYPWLKVTYE*
Ga0136655_11530071	3300010316	Freshwater To Marine Saline Gradient	LNYYPNAGNFQEYDYECEWLECDWKIVYGTFNLVTAFWYPWIRINYPA*
Ga0136656_12491411	3300010318	Freshwater To Marine Saline Gradient	NAGNFQEYPYETEWLECDWKFVHDTVHLVTAFWYPWIKVDYDYYK*
Ga0129333_109786212	3300010354	Freshwater To Marine Saline Gradient	NSIMSTFHLEHLPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFWYPWIRINYS*
Ga0129347_12522832	3300012504	Aqueous	MYYLNWTPNAGNFQEYTYECEWLECDWKIVYGTFNLVTAFWYPWIRINYS*
Ga0129340_11921832	3300012963	Aqueous	MTKEEGYNAGNFQEYTYELECMECDWKIVYGTFNLVTAFFYPWILYNNK*
Ga0181584_1000509016	3300017949	Salt Marsh	MNKPEGYNAGNFQEYTYECEWLECDWKIVYGTFNLVTAFWYPWIRINYE
Ga0181607_101632833	3300017950	Salt Marsh	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAFCYPWINISYK
Ga0181580_101145595	3300017956	Salt Marsh	MVYNLNWQPNAGNLQEYTYECEWMECEWKHVHDTIHLVTAFCYPWIDIKYE
Ga0181580_105081502	3300017956	Salt Marsh	MTQTYLLNWVPNAGNFQEYPYETEWLECDWKYVHDTLHLVTAFWYPWIDTSKYKYSV
Ga0181581_106313511	3300017962	Salt Marsh	MTQTYLLNWVPNAGNFQEYPYETEWLECDWKFVHDTLHLVTAFWYPWIDTSKYKYSV
Ga0181590_1001431010	3300017967	Salt Marsh	MHNLNWIPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFMYPWIRIKYD
Ga0181590_100418463	3300017967	Salt Marsh	MTHTLNWHPNAGNFQEYTYECEWIECEWKLVHDTIHLVTAFCYPWIKINIQA
Ga0181585_103118661	3300017969	Salt Marsh	WIPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFMYPWIRIKYD
Ga0180433_103604792	3300018080	Hypersaline Lake Sediment	MYHLNWEPNAGNFQEYTYECEWLECDWKHVYKTFQLVTAFWYPWLKV
Ga0180433_106834412	3300018080	Hypersaline Lake Sediment	MTHTDPNAGNFQEYTYECEWLECYWKNVYKTIHLVTAFTYPWLTVKY
Ga0181591_110428612	3300018424	Salt Marsh	MDLKYLNAGNFQEYTYECEWLECHWKHVHNTIHLVTLFTMPWLHIRP
Ga0182069_13851501	3300019267	Salt Marsh	NAGNFQEYTYECEWLECDWKIVYGTFNLVTAFWYPWIRINYE
Ga0211734_108939362	3300020159	Freshwater	PRSLNTEIAPNAGNFQEYTYELEWMECVWNNTYQITDMVTAYWYPWIRRDS
Ga0213861_105625382	3300021378	Seawater	MAHTYHLNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0213866_100185954	3300021425	Seawater	MYYLNWTPNAGNFQEYTYECEWLECDWKHVYKTFHLVTAFWYPWIKVDYDKF
Ga0222717_102688131	3300021957	Estuarine Water	MANTYSLNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0222717_105613611	3300021957	Estuarine Water	MTHTLNWQPNAGNFQEYTYECEWTECSWKHVHNTVHLVTA
Ga0222718_102281512	3300021958	Estuarine Water	MYNLNWVPNAGNFQEYPYETEWLECDWKFVHDTLHLVTAFWYPWIKVDYDKF
Ga0222718_105489292	3300021958	Estuarine Water	MNKQEGYNAGNFQEYTYECESMECDWKIVYGTFNLVSAFYYPWIQIKYE
Ga0222716_1004540311	3300021959	Estuarine Water	MSYRLNWIPNEGNFQEYPYETEWLECEWKFIYDMTRLVTAFWYPWIRI
Ga0222716_101289962	3300021959	Estuarine Water	MVTEIKPNAGNFQEYTYECEWLECHWKQVYNTIHLVTAFYYPWINLQ
Ga0222716_101545232	3300021959	Estuarine Water	MANTYALNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0222716_103710701	3300021959	Estuarine Water	RMTHKLNWQPNAGNFQEYTYECEWTECYWKNVHNTTHLVTAFMYPWLKVTYA
Ga0222716_105962882	3300021959	Estuarine Water	MYHLNWTPNAGNFQEYSYETEWLECDWKYVHDTLHLVTAFWYPWIDTSKYKYSV
Ga0222715_100507716	3300021960	Estuarine Water	MTHTYHLNWLPNAGNFQEYPYETEWLECDWKYVHDTLHLVTAFWYPWIDTSKYKYFV
Ga0222715_100957044	3300021960	Estuarine Water	VTEIKPNAGNFQEYNYECEWIECYWKNVHNTIHLVTAFYYPWIKVNP
Ga0222715_101853901	3300021960	Estuarine Water	LNWQPNAGNFQEYSYETEWLECDWKYVHDTLHLVTAFWYPWIKVDYDKF
Ga0222715_102340723	3300021960	Estuarine Water	MVYNLNWQPNAGNFQEYSYETEWLECDWKYVHDTLHLVTAFWYPWIDT
Ga0222715_103558991	3300021960	Estuarine Water	MTHKLNWTPNEGNFQEYPYETEWLECSWMNVYDMTRLVTAFWYPWLKI
Ga0222714_1001030223	3300021961	Estuarine Water	MTHKLNWTPNEGNFQEYPYETEWLECSWINVYDMTRLVTAFWYPWLKI
Ga0222714_100150469	3300021961	Estuarine Water	MTTWHLDYYPNAGNFQEYTYECEWIECDWKIVYGTFNLVTAFWYPWIRINYPN
Ga0222714_100284239	3300021961	Estuarine Water	MVYNLNWQPNAGNFQEYSYETEWLECDWKYVHDTLHLVTAFWYPWIDTSKYKYSV
Ga0222714_100450873	3300021961	Estuarine Water	MTHTLNWQPNAGNFQEYTYECEWMECSWKHVHNTVHLVTAFMYPWLKVTYE
Ga0222714_101072861	3300021961	Estuarine Water	MYLKNEPQYNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0222714_102149973	3300021961	Estuarine Water	MTHKLNWQPNAGNFQEYTYECEWTECYWKNVHNTTHLVTAFMYPWLKVTYA
Ga0222714_105089842	3300021961	Estuarine Water	MTQTYRLNWVPNEGNFQEYDYETEWLECDWKLVHDTLHLVTAFCYPWLTIRYE
Ga0222714_106823411	3300021961	Estuarine Water	MTHKLNWIPNEGNFQEYPYETEWLECSWINVYDMTRLVTAFWYP
Ga0222714_106880272	3300021961	Estuarine Water	MTHKLNWTPNEGNFQEYPYETEWLECSWINVYDMTRLVTSFWYPWLKI
Ga0222713_102645412	3300021962	Estuarine Water	MANTYALNWLPNAGNFQEYPYETEWLECDWKYVHDTLHLVTAFWYPWIDTSSYKYNI
Ga0196905_10193671	3300022198	Aqueous	NWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0196905_10844883	3300022198	Aqueous	MYKLNWQPNEGNFQEYSYETEWLECEWKKVYDMTRLVTAFWYPWLKIA
Ga0196905_11016072	3300022198	Aqueous	MTKEEGYNAGNFQEYTYELEWMECDWKIVYGTFNLVTAFFYPWILYNNK
Ga0196901_10251095	3300022200	Aqueous	MVYKLNWQPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSY
Ga0196901_10252711	3300022200	Aqueous	NAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0196901_10312481	3300022200	Aqueous	MAHTYHLNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSY
Ga0255751_100277294	3300023116	Salt Marsh	MTHTLNWQPNAGNFQEYTYECEWIECEWKLVHDTIHLVTAFCYPWIKINIQA
Ga0208004_11358122	3300025630	Aqueous	IMSYRLNWIPNEGNFQEYPYETEWLECEWKSIYDMTRLVTAFWYPWIRI
Ga0208161_10121892	3300025646	Aqueous	MYNLNWIPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFMYPWIRIKYD
Ga0208161_11513022	3300025646	Aqueous	MYHLNWTPNAGNFQEYSYETEWLECDWKFVHDTLHLVTAFWYPWIKVDYDKF
Ga0208160_10191971	3300025647	Aqueous	MVYKLNWQPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWY
Ga0208160_10260123	3300025647	Aqueous	MSTFHLEHLPNAGNFQEYTYECEWMECDWKIVYGTFNLVTAFWYPWIRINYS
Ga0208160_10277194	3300025647	Aqueous	MVYKLNWQPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0208150_11057363	3300025751	Aqueous	MNKEEGYNAGNFQEYTYECEWMECDWKMVYGTFNLVTAFWYPWIRINYE
Ga0208899_10323331	3300025759	Aqueous	EYSYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0208899_11681912	3300025759	Aqueous	MDLKYLNAGNFQEYTYECEWMECEWKLVHGTIHLVTAYTMPWLHIRP
Ga0208767_11024202	3300025769	Aqueous	MAKTYALNWLPNAGNFQEYPYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0208767_12124942	3300025769	Aqueous	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAF
Ga0208542_101080410	3300025818	Aqueous	MSYRLNWIPNEGNFQEYPYETEWLECEWKSIYDMTRLVTAFWYPWIRI
Ga0208547_10086019	3300025828	Aqueous	MAHTYHLNWLPNAGNFQEYSYETEWLECDWKYVHDTIHLVTAFWYPWIDTSSYKYNI
Ga0208644_101405311	3300025889	Aqueous	MRHKLNWIPNEGNFQEYTYETEWLECSWINVYDMTRLVTAFWYPWLKI
Ga0208644_12208771	3300025889	Aqueous	MAHTYHLNWLPNAGNFQEYSYETEWLECDWKYVHDTIHLVTA
Ga0209777_101641344	3300027896	Freshwater Lake Sediment	MTNVQLIPNAGNFQEYNYECEWMECYWNIIYKQVDLVTAYWYPWVKRN
Ga0209536_1006175873	3300027917	Marine Sediment	MVYNLNWQPNAGNFQEYTYECEWMECEWKLVHDTIHLVTAFYYPWINISYK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences