Metagenome Family F072870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072870
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	52 residues
Representative Sequence	MSTATTWRTDDPCPVCGTGLHHTDDGTSVITQDCPLCGWSATWQADLDGEAA
Number of Associated Samples	80
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.33 %
% of genes near scaffold ends (potentially truncated)	12.40 %
% of genes from short scaffolds (< 2000 bps)	66.12 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.562 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (20.661 % of family members)
Environment Ontology (ENVO)	Unclassified (23.967 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.843 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.00% Coil/Unstructured: 70.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01580	FtsK_SpoIIIE	28.93
PF14659	Phage_int_SAM_3	4.96
PF12728	HTH_17	4.13
PF07702	UTRA	2.48
PF00392	GntR	1.65
PF00589	Phage_integrase	1.65
PF00196	GerE	0.83
PF03795	YCII	0.83
PF02913	FAD-oxidase_C	0.83
PF08281	Sigma70_r4_2	0.83
PF03186	CobD_Cbib	0.83
PF07110	EthD	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	Cell cycle control, cell division, chromosome partitioning [D]	28.93
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.83
COG1270	Cobalamin biosynthesis protein CobD/CbiB	Coenzyme transport and metabolism [H]	0.83
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.21 %
Unclassified	root	N/A	5.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.56 %
Unclassified	root	N/A	5.79 %
Viruses	superkingdom	All Organisms → Viruses	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.56 %
Unclassified	root	N/A	5.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.74 %
Unclassified	root	N/A	5.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.74 %
Unclassified	root	N/A	5.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	81.82 %
Unclassified	root	N/A	5.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	22.31 %
Unclassified	root	N/A	5.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.13 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.31 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.13 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.83 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.13 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	0.83 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.13 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	0.83 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001403\|JGI20205J14842_1000017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37607	Open in IMG/M
3300001403\|JGI20205J14842_1000932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5226	Open in IMG/M
3300004092\|Ga0062389_101147523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	963	Open in IMG/M
3300004152\|Ga0062386_100206108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1548	Open in IMG/M
3300005436\|Ga0070713_101413458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300005445\|Ga0070708_100008906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	8079	Open in IMG/M
3300005445\|Ga0070708_101796238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	569	Open in IMG/M
3300005468\|Ga0070707_100193389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1984	Open in IMG/M
3300005764\|Ga0066903_101058030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1491	Open in IMG/M
3300005764\|Ga0066903_101880082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146	Open in IMG/M
3300005764\|Ga0066903_104274164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	764	Open in IMG/M
3300005900\|Ga0075272_1088483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	589	Open in IMG/M
3300005952\|Ga0080026_10003446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3722	Open in IMG/M
3300009029\|Ga0066793_10604209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300009519\|Ga0116108_1188681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300009792\|Ga0126374_10290867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1090	Open in IMG/M
3300009826\|Ga0123355_10315811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2112	Open in IMG/M
3300010043\|Ga0126380_10434222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	987	Open in IMG/M
3300010048\|Ga0126373_10016719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6107	Open in IMG/M
3300010048\|Ga0126373_10034794	All Organisms → Viruses → Predicted Viral	4386	Open in IMG/M
3300010048\|Ga0126373_10047573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3799	Open in IMG/M
3300010048\|Ga0126373_13257447	Not Available	505	Open in IMG/M
3300010049\|Ga0123356_13220936	Not Available	568	Open in IMG/M
3300010343\|Ga0074044_10998834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300010359\|Ga0126376_10757114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300010359\|Ga0126376_12921115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300010360\|Ga0126372_11037317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	834	Open in IMG/M
3300010361\|Ga0126378_10065341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3458	Open in IMG/M
3300010361\|Ga0126378_11214455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300010366\|Ga0126379_11817565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300010376\|Ga0126381_101678308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300010379\|Ga0136449_100412965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2388	Open in IMG/M
3300010379\|Ga0136449_104564341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300010398\|Ga0126383_13487925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300012201\|Ga0137365_10000752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23223	Open in IMG/M
3300012201\|Ga0137365_10828302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300012350\|Ga0137372_10039320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4276	Open in IMG/M
3300012354\|Ga0137366_10026984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4463	Open in IMG/M
3300014156\|Ga0181518_10338235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300014156\|Ga0181518_10376844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	690	Open in IMG/M
3300014158\|Ga0181521_10058869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2579	Open in IMG/M
3300014158\|Ga0181521_10064932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2411	Open in IMG/M
3300014158\|Ga0181521_10274948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	877	Open in IMG/M
3300014158\|Ga0181521_10286846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300014158\|Ga0181521_10532484	Not Available	558	Open in IMG/M
3300014159\|Ga0181530_10023528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4600	Open in IMG/M
3300014159\|Ga0181530_10599580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	539	Open in IMG/M
3300014638\|Ga0181536_10410330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300016371\|Ga0182034_11212157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	657	Open in IMG/M
3300016404\|Ga0182037_10544746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	978	Open in IMG/M
3300016445\|Ga0182038_11941896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300017930\|Ga0187825_10276776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300017938\|Ga0187854_10270797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300017946\|Ga0187879_10175906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1204	Open in IMG/M
3300017970\|Ga0187783_10260698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1267	Open in IMG/M
3300018014\|Ga0187860_1283436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	647	Open in IMG/M
3300018014\|Ga0187860_1361499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300018017\|Ga0187872_10374728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	607	Open in IMG/M
3300018044\|Ga0187890_10403173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300018057\|Ga0187858_10104281	Not Available	1933	Open in IMG/M
3300018058\|Ga0187766_10541006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	789	Open in IMG/M
3300021560\|Ga0126371_10047083	All Organisms → Viruses → Predicted Viral	4114	Open in IMG/M
3300021560\|Ga0126371_10228273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1969	Open in IMG/M
3300021560\|Ga0126371_10392079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1529	Open in IMG/M
3300025474\|Ga0208479_1066126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300025588\|Ga0208586_1023815	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300025604\|Ga0207930_1044394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1133	Open in IMG/M
3300025915\|Ga0207693_10478226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	973	Open in IMG/M
3300025922\|Ga0207646_10022284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5838	Open in IMG/M
3300026217\|Ga0209871_1012489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1588	Open in IMG/M
3300026294\|Ga0209839_10124759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	865	Open in IMG/M
3300026319\|Ga0209647_1004000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11230	Open in IMG/M
3300026467\|Ga0257154_1084674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300026551\|Ga0209648_10149988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300029999\|Ga0311339_10117450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3224	Open in IMG/M
3300030007\|Ga0311338_10186173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2414	Open in IMG/M
3300031234\|Ga0302325_10430453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2037	Open in IMG/M
3300031234\|Ga0302325_11718862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300031234\|Ga0302325_12765301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	576	Open in IMG/M
3300031236\|Ga0302324_102471906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300031236\|Ga0302324_103421911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300031520\|Ga0272428_1041794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3865	Open in IMG/M
3300031543\|Ga0318516_10017362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3611	Open in IMG/M
3300031543\|Ga0318516_10297273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	933	Open in IMG/M
3300031640\|Ga0318555_10064270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1886	Open in IMG/M
3300031640\|Ga0318555_10717281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300031736\|Ga0318501_10773631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300031768\|Ga0318509_10021654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3018	Open in IMG/M
3300031793\|Ga0318548_10002109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6493	Open in IMG/M
3300031845\|Ga0318511_10054482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1613	Open in IMG/M
3300031893\|Ga0318536_10055165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1928	Open in IMG/M
3300032052\|Ga0318506_10400107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300032052\|Ga0318506_10522086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300032066\|Ga0318514_10058536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1881	Open in IMG/M
3300032783\|Ga0335079_10015423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8738	Open in IMG/M
3300032783\|Ga0335079_10025211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6814	Open in IMG/M
3300032783\|Ga0335079_10913270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	901	Open in IMG/M
3300032783\|Ga0335079_11554268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300032805\|Ga0335078_10025617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8750	Open in IMG/M
3300032805\|Ga0335078_10821812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1129	Open in IMG/M
3300032828\|Ga0335080_11717563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300032892\|Ga0335081_12082234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	602	Open in IMG/M
3300032895\|Ga0335074_10009810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13381	Open in IMG/M
3300032895\|Ga0335074_10016934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10264	Open in IMG/M
3300032895\|Ga0335074_10027826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7946	Open in IMG/M
3300032895\|Ga0335074_10057742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5309	Open in IMG/M
3300032895\|Ga0335074_10058174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5286	Open in IMG/M
3300032895\|Ga0335074_10133592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3183	Open in IMG/M
3300032895\|Ga0335074_10163230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2793	Open in IMG/M
3300032895\|Ga0335074_10291715	Not Available	1873	Open in IMG/M
3300032896\|Ga0335075_10191690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2462	Open in IMG/M
3300032898\|Ga0335072_10157465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2771	Open in IMG/M
3300032898\|Ga0335072_11667911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300032955\|Ga0335076_10020159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6693	Open in IMG/M
3300032955\|Ga0335076_10349980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1364	Open in IMG/M
3300033134\|Ga0335073_10259605	Not Available	2111	Open in IMG/M
3300033134\|Ga0335073_11241625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	743	Open in IMG/M
3300033134\|Ga0335073_11739660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300033158\|Ga0335077_12102894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300033290\|Ga0318519_10710481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	615	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.35%
Host-Associated	Host-Associated	1.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.99%
Aquatic	Environmental → Aquatic	17.36%
Arthropoda	Host-Associated → Arthropoda	1.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.38%
Freshwater	Environmental → Aquatic → Freshwater	17.36%
Peat	Environmental → Terrestrial → Peat	5.79%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.65%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.36%
Loam	Environmental → Terrestrial → Soil → Loam	7.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.79%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.13%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.65%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	20.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.65%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20205J14842_100001741	3300001403	Arctic Peat Soil	MSPVTSWRTDDPCPVCGTGLDYTDDGITDIRQDCPLCGWSATWTTNPDPDMGGDR*
JGI20205J14842_10009326	3300001403	Arctic Peat Soil	MSPVTSWRTDDPCPVCGTGLDYTDDGVTDIRQDCPLCGWSATWTTNPDPDMGGDR*
Ga0062389_1011475232	3300004092	Bog Forest Soil	MSTTWRTDDPCPVCGTGLHHTDDGTSDARQDCPLCGWSATWTTDPDTGGAR*
Ga0062386_1002061082	3300004152	Bog Forest Soil	MTAPTTWRTDDPCPLCGTGLTTTDSSDGSQTDQYCNLCGWSITWQAALDLDGDRQP*
Ga0070713_1014134582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKPAPTWRTDDPCPVCGTGLHATSTTGGTTVRQDCPLCGWSATWNTEGGRP*
Ga0070708_1000089067	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTIVTTWRTDDPCPVCGTDLTSTDNHTGDLRQDCPLCGWSATWQAGMDGEAA*
Ga0070708_1017962382	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTTATIWRTDDPCPVCGSGLHATDDGASVIRQDCLLCGWSATWQARMDGEAA*
Ga0070707_1001933892	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVTTWRTDDPCPVCGTGLHHTDDRTTIRQDCPLCGWSATWQARMDGEAA*
Ga0066903_1010580302	3300005764	Tropical Forest Soil	MSTATTWRSDDPCPVCGTGLLYTDDGASAITQDCPLCGWSATWQARMDGEAA*
Ga0066903_1018800822	3300005764	Tropical Forest Soil	MTGPARWRTDDPCPVCGTGLITTDDTGGRQAGQDCPLCGWSVARQTAADLTSKES*
Ga0066903_1042741642	3300005764	Tropical Forest Soil	MNPTAATWRTDDPCPVCGTGLHVTDDGTSAVTQDCPLCGWSAAWQADVDGEAA*
Ga0075272_10884832	3300005900	Rice Paddy Soil	MTLPFLWRTDDPCPVCGTGLHATDDGAVQQCGLCGWSATWQTQMDGGDA*
Ga0080026_100034462	3300005952	Permafrost Soil	MSPVTSWRTDDPCPVCGTGLDYTDDGVTDVRQDCPLCGWSATWTTDPTAGGSE*
Ga0066793_106042092	3300009029	Prmafrost Soil	MSSATTWRTDDPCPVCGTGLTYTDDGVSAITQDCGLCGWSATWQADMNGGSQ*
Ga0116108_11886812	3300009519	Peatland	MSPATTWRTDDPCPVCGTGLTYTDDGVSAIMQDCALCGWSATWQADINDGGSR*
Ga0126374_102908673	3300009792	Tropical Forest Soil	MNAVTTWRTDDPCPVCGTGLITTDDTGGRQAGQDCPLCGWSVARQTAADLTSKES*
Ga0123355_103158112	3300009826	Termite Gut	MTGQTRWRTDEPCPVCGTGLITTDDNGGRPAGQDCPLCGWFATWQAEADLTSKEG*
Ga0126380_104342222	3300010043	Tropical Forest Soil	MTGPARWRTDDPCPVCGTGLITTDDTGGRQAGQDCPLCGWSVTWQTAPGTSKES*
Ga0126373_100167197	3300010048	Tropical Forest Soil	MNAVTTWRTDDPCPVCGTGLHHIDDGTTTRQDCPLCGWSATWAAEAIGGQQ*
Ga0126373_100347942	3300010048	Tropical Forest Soil	MSAVTTWRTDDPCPACGTGLQNTDDQKTTRQDCPLCGWSATWAAEVIGGQQ*
Ga0126373_100475735	3300010048	Tropical Forest Soil	MSTVTTWRTDDPCPVCGTGLHATDDGASVIRQDCPLCGWSATWQARMDGEAA*
Ga0126373_132574472	3300010048	Tropical Forest Soil	MTGLTTWRTDDPCPACGTGLITTDDVNGHQVGQDCPLCGWSATWQAALDTSKED*
Ga0123356_132209362	3300010049	Termite Gut	MSDPAKWQTEEPCPACGAGLIATDDTDGNQIGQDCPSCGWSATWQPALDLTAEA*
Ga0074044_109988341	3300010343	Bog Forest Soil	ATTWRTDDPCPVCGTGLHHTGDGQPVIRQDCPLCGWSATWQAAMDGEAA*
Ga0126376_107571141	3300010359	Tropical Forest Soil	AGAGRMNAVTTWRTDDPCPVCGTGLRHTDDGTTTRQDCPLCGWSATWTTEAIGGQQ*
Ga0126376_129211152	3300010359	Tropical Forest Soil	MTGLTRWRTDDPCPVCGTGLITTDDTDGLQADQDCPLCGWSATWQTALYTIKEA*
Ga0126372_110373172	3300010360	Tropical Forest Soil	MTTMTTWRTDDPCPVCGTDLTSTDDGASVIRQDCPLCGWSACWQAAMDGEAA*
Ga0126378_100653412	3300010361	Tropical Forest Soil	MNAVTTWRTDDPCPVCGTGLHHIDDGTTTRQDCPLCGWSATWTTEAIGGQQ*
Ga0126378_112144552	3300010361	Tropical Forest Soil	MSRATTWRTDDPCPVCGTGLHHTDDGISAVTQDCPLCGWSATWQADLDGEAA*
Ga0126379_118175652	3300010366	Tropical Forest Soil	MSRATTWRTDDPCPVCGTGLHSTDDGTASITQDCPLCGWSATWQADLDGEAA*
Ga0126381_1016783082	3300010376	Tropical Forest Soil	MTGLRTWRTDDPCPACGTGLTTTNDANGRQVRQDCPLCGWSATWQTALDTIKEG*
Ga0136449_1004129652	3300010379	Peatlands Soil	MNATTWRTDDPCPVCGTGLHDTDDGTSTVTQDCPLCGWTGTWQAGTDGEAG*
Ga0136449_1045643412	3300010379	Peatlands Soil	MNATTWRTDDPCPVCGTGLHYTDDGINTITQDCPLCGWSATWQADIDQGAS*
Ga0126383_134879252	3300010398	Tropical Forest Soil	MTATTWRTDDPCPVCGTGLHHTDDDAVITQDCPLCGWFAAWDGGDADD*
Ga0137365_100007527	3300012201	Vadose Zone Soil	MTEVTSWRTDDPCPACGTGLTATDTGSQVTQDCGLCGWSATWQAD*
Ga0137365_108283022	3300012201	Vadose Zone Soil	SWRTDDPCPACGTGLTATDTGSQVIQDCALCGWSATWQADLDGGSS*
Ga0137372_100393202	3300012350	Vadose Zone Soil	MTEVTSWRTDDPCPACGTGLTATDTGSQVIQDCALCGWSATWQADLDGGSS*
Ga0137366_100269845	3300012354	Vadose Zone Soil	MTEVTSWRTDDPCPACGTGLTATDTGSQVIQDCGLCGWSATWQADLDGGSP*
Ga0181518_103382352	3300014156	Bog	MSPSTTWRTDDPCPVCGTGLTYTDDGSSTIRQDCALCGWSANWQADLDDGGSR*
Ga0181518_103768442	3300014156	Bog	MNATTWRTDDPCPVCGTGLHYTDDGVSAIIQDCRLCGWSATWQADMDREAS*
Ga0181521_100588692	3300014158	Bog	MSPSTTWRTDDPCPVCGTGLHYTDDGIAAITQDCRLCGWSATWQADMDGEAA*
Ga0181521_100649324	3300014158	Bog	MNATTWRTDDPCPVCGTGLHYTDDGVSAITQDCPLCGWSATWQADMNQEAS*
Ga0181521_102749482	3300014158	Bog	MSPATTWRTDDPCPVCGTSLTYTDDGISAITQDCALCGWSATWQADMDDGGSR*
Ga0181521_102868462	3300014158	Bog	MNATTWRTDDPCPVCGTGLHYTDDGISTITQDCPLCGWSATWQADMNQEAS*
Ga0181521_105324842	3300014158	Bog	MNATTWRTDDPCPVCGTGLQYTDDGISAITQDCRLCGWSATWQADMDQEAS*
Ga0181530_100235285	3300014159	Bog	MSPATTWRTDDPCPVCGTGLTYTDDGVPAIMQDCALCGWSATWQADINDGGSR*
Ga0181530_105995802	3300014159	Bog	MSPATTWRTDDPCPVCGTSLTYTDDGISAITQDCALCGWSATWQADMDREAR*
Ga0181536_104103302	3300014638	Bog	MNATTWRTDDPCPVCGTGLTYTDDGVSAIMQDCALCGWSATWQADINDGGSR*
Ga0182034_112121572	3300016371	Soil	MSTATTWRTDDPCPVCGTGLHHTDVGTSVITQDCPLCGWSATWQAAMDGEAA
Ga0182037_105447462	3300016404	Soil	MNAPTTWRTGDPCPVCGTGLHSTDDGTAAVTQDCPLCGWSATWAADPIGGQQ
Ga0182038_119418962	3300016445	Soil	MNAPTTWRTDDPCPVCGTGLHSTDDGTAAVTQDCPLCGWSATWQV
Ga0187825_102767762	3300017930	Freshwater Sediment	MNQPTTRWRTDDPCPVCGAGLIATDDGDVTIRQDCPLCGWSAAWQADLDGEAA
Ga0187854_102707972	3300017938	Peatland	MSPSTTWRTDDPCPVCGTGLTYTDDGVSAIMQDCALCGWSATWQADINDGGSR
Ga0187879_101759062	3300017946	Peatland	MSPATTWRTDDPCPVCGTGLNCTDDGIFAITQDCALCGWSATWQADMDREAR
Ga0187783_102606982	3300017970	Tropical Peatland	MTAQTWRTDDPCPVCGTGLHHTDNGAVVTQDCPLCGWSAAWDGDADD
Ga0187860_12834362	3300018014	Peatland	MSPATTWRTDDPCPVCGTGLTYTDDGVSAIMQDCALCGWSATWQADINDGGSR
Ga0187860_13614992	3300018014	Peatland	MNATTWRTDDPCPVCGTGLHYTDDGVSAITQDCPLCGWSATWQADLNQEAS
Ga0187872_103747282	3300018017	Peatland	MSPSATWRTDDPCPVCGTGLHYTDDGIAAITQDCRLCGWSATWQADMDGEAA
Ga0187890_104031732	3300018044	Peatland	MSPATTWRTDDPCPVCGTSLTYTDDGISAITQDCALCGWSATWQADMDDGGSR
Ga0187858_101042812	3300018057	Peatland	MSPSTTWRTDDPCPVCGTGLHYTDDGIAAITQDCRLCGWSATWQADMDGEAA
Ga0187766_105410062	3300018058	Tropical Peatland	MNAATIWRTDDPCPVCGTGLHQTDDGTSVITQDCPLCGWSATWAASQDGGCQ
Ga0126371_100470836	3300021560	Tropical Forest Soil	MNAVTTWRTDDPCPVCGTGLHHIDDGTTTRQDCPLCGWSATWAAEAIGGQQ
Ga0126371_102282732	3300021560	Tropical Forest Soil	MNPTAATWRTDDPCPVCGTGLHVTDDGTSAVTQDCPLCGWSAAWQADVDGEAA
Ga0126371_103920792	3300021560	Tropical Forest Soil	MSTATTWRSDDPCPVCGTGLLYTDDGASAITQDCPLCGWSATWQAQMDGEAP
Ga0208479_10661261	3300025474	Arctic Peat Soil	ADGDRGGCCRMNATTWRTDDPCPVCGTGLHYTDDGVSAITQDCRLCGWSATWQADLDREV
Ga0208586_10238152	3300025588	Arctic Peat Soil	MSPVTSWRTDDPCPVCGTGLDYTDDGITDIRQDCPLCGWSATWTTNPDPDMGGDR
Ga0207930_10443942	3300025604	Arctic Peat Soil	MSPATTWRTDDPCPVCGTGLHYTDDGISAITQDCRLCGWSATWQADLNQEAS
Ga0207693_104782262	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIPAPAWRTDDPCPVCGTGLHATTTAAGARIRQDCPLCGWSATWNTEGGRP
Ga0207646_100222844	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVTTWRTDDPCPVCGTGLHHTDDRTTIRQDCPLCGWSATWQARMDGEAA
Ga0209871_10124892	3300026217	Permafrost Soil	MSPVTSWRTDDPCPVCGTGLDYTDDGVTDVRQDCPLCGWSATWTTDPTAGGSE
Ga0209839_101247592	3300026294	Soil	MSPVTSWRTDDPCPVCGTGLDYTDDGVTDVRQDCPLCGWSATWTTD
Ga0209647_100400010	3300026319	Grasslands Soil	MMSTTWRTDDPCPACGTGVTSTDNGGPAVRQDCPLCGWSTTWQAPVDGEAA
Ga0257154_10846742	3300026467	Soil	MNTTWRTDDPCPVCGTGLTYTDDGSSAITQDCPLCGWSATWQAGRDGEAV
Ga0209648_101499882	3300026551	Grasslands Soil	MTEVTSWRTDDPCPVCGNGLTYIDDGISQVTQECGLCGWSATWQADLDGGSQ
Ga0311339_101174502	3300029999	Palsa	MTGLTTWRTDDPCPVCGSGLLTIEDPDGNQLGQDCQLCGWSTTWLAGPVPDRGDDL
Ga0311338_101861732	3300030007	Palsa	MNTTTTTTWRTDDPCPVCGTGLTATDDGAKVTQHCGLCGWSAIWQAGRDGEAR
Ga0302325_104304533	3300031234	Palsa	MNAITRWRTDDPCPVCGTGLTTTDNPAGQQIAQDCGLCGWSAAWRASFNLEGLSR
Ga0302325_117188622	3300031234	Palsa	MTGQTSWRTDDPCPICGTGLTATDSPAGTQIAQDCGLCGWSATWQAALDLDGGLA
Ga0302325_127653012	3300031234	Palsa	MTTPTSWRTDDPCPICSTGLYAVDTGTLVLQDCRLCGWSTTWQADLNLDDTARESSK
Ga0302324_1024719062	3300031236	Palsa	MTAITTAWRTDDPCPVCGTGLTTTDTPDGSQLAQDCALCGWSVTWQASLDLEGTPR
Ga0302324_1034219112	3300031236	Palsa	MTATTWRTDDPCPVCGTGLTATDDGTGTITQDCGLCGWSATWQAGTDGEAP
Ga0272428_10417947	3300031520	Rock	MSLVTTWQTDDPCPVCGTGLHCTDDGTPAVRQDCPLCGWSATWQAQMDGDAP
Ga0318516_100173624	3300031543	Soil	MNTTATTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSQDGGRQ
Ga0318516_102972732	3300031543	Soil	MSTMTTWRTDDPCPVCGTGLTATDDDTGHQVRQDCALCGWSTTWNTTPA
Ga0318555_100642702	3300031640	Soil	MKPTATTWRTDDPCPVCGTGLHATDDDTSAIRQDCPLCGWSATWQADLDGEAA
Ga0318555_107172812	3300031640	Soil	MSTMTTWRTDDPCPVCGTGLTATDDDTGHQVRQDCALCGWSTTWNTTPAAGER
Ga0318501_107736312	3300031736	Soil	MSAVTTWRTDDPCPACGTGLHHTDDGTTTRQDCPLCGWSATWAADAIGGHQ
Ga0318509_100216541	3300031768	Soil	TTAPTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSQDGGRQ
Ga0318566_105351402	3300031779	Soil	DDPCPACGTGLHTTDNDAASITQDCPLCGWSATWQADLDGEAA
Ga0318548_100021098	3300031793	Soil	MNAPTTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSQDGGRQ
Ga0318511_100544823	3300031845	Soil	MSTMTTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSLDGGRQ
Ga0318536_100551651	3300031893	Soil	ATTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSQDGGRQ
Ga0318506_104001072	3300032052	Soil	MNAPTTWRTDDPCPVCGTGLHSTDDGTAAVTQDCPLCGWSATWQVPRVVLSAT
Ga0318506_105220861	3300032052	Soil	MNTTATTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSQDGG
Ga0318514_100585364	3300032066	Soil	RGGGRMNTTATTWRTDDPCPVCGTGLHTTDNGAATVTQDCPLCGWSTTWATSQDGGRQ
Ga0335079_100154235	3300032783	Soil	MIAQTWRTDDPCPVCGTGLHHTDHGAVIAQDCPLCGWSATWDGGDADD
Ga0335079_100252119	3300032783	Soil	MSPITTWRTDDPCPVCGTGLTYTDDGVSQITQECRLCGWSATWQADTQDGGSQ
Ga0335079_109132703	3300032783	Soil	MTPTTTWRTDDPCPVCGTGLHYTDDGISAITQDCPLCGWSATWQVQTDGEPHD
Ga0335079_115542682	3300032783	Soil	MSMATTWRWRTDDPCPVCGTGLHCTDDGGSIVQQECPLCGWSATWTAEPAEGSGR
Ga0335078_100256175	3300032805	Soil	MTTTTTWRTDDPCPVCGTGLHHTDDGAVITQDCPLCGWSAAWTGGDADD
Ga0335078_108218122	3300032805	Soil	MTTVTTWRTDDPCPACGTGLHATDNGAVMRQDCPLCGWSATWQAQMDGEAA
Ga0335080_117175631	3300032828	Soil	TDDPCPLCGTGLHCTDDGGSAIGQDCPLCGWSATWTTGSPSGGGQ
Ga0335081_120822342	3300032892	Soil	MSPLTTWRTDDPCPVCGTGLHITDDGAAPVTQECPLCGWSATWTAEAGDGAADE
Ga0335074_1000981014	3300032895	Soil	MNTRWRTDDPCPVCGTGLTSTDDLAGHQIDQDCPLCGWSASWQTALDLNGGQ
Ga0335074_100169349	3300032895	Soil	MNTLTRWRTDDPCPVCGTGLTTTDSKDGQQMAQDCGLCGWSVTWQVAVSSRRREVAGDE
Ga0335074_100278265	3300032895	Soil	MTTTWRTDDPCPVCGTGLTYTDDGSSAITQDCPLCGWSATWQAGRDGEAA
Ga0335074_100577426	3300032895	Soil	MTGQTRWRTDDPCPVCGAGLTATDNPAGQQIGQDCGLCGWSVTWQAALDLTTKD
Ga0335074_100581748	3300032895	Soil	MTGQRWRTDDPCPVCGTGLTATDDHNGCQIGQDCGLCGWSAAWQAALDLTPKD
Ga0335074_101335924	3300032895	Soil	MSAVTRWRTDDPCPVCGTGLTATDDPAGNQTGQDCGLCGWSVTWQTSMTLNGGQ
Ga0335074_101632305	3300032895	Soil	MTGQTRWRTDDPCPVCGTGLTATDDTGGQQIGQDCPLCGWSATWQAALDLRKD
Ga0335074_102917152	3300032895	Soil	VTGQTRWRTDDPCPVCGTGLTSTDNQNGCQIGEDCGLCGWSATWQANLDLTPKD
Ga0335075_101916903	3300032896	Soil	MNTTWRTDDPCPVCGTGLTYTDDGTSSITQDCPLCGWSATWQAGRDGEAA
Ga0335072_101574652	3300032898	Soil	MSAVTRWRTDDPCPVCGTGLTSTDNAAGQQAGQDCGLCGWSVTWQTSLSLEGAFR
Ga0335072_116679112	3300032898	Soil	MTPTTTWRTDDPCPVCGTGLHYTDDGISAITQDCPLCGWSATWQAGRDGEAA
Ga0335076_100201596	3300032955	Soil	MNPTDTTWRTDDPCPVCGTGLHVTDDGISAATQNCPLCGWSAAWQANLDGEAA
Ga0335076_103499802	3300032955	Soil	MSTATTWRTDDPCPVCGTGLHHTDDGTSVITQDCPLCGWSATWQASMDGEAA
Ga0335073_102596051	3300033134	Soil	MNAVTRWRTDDPCPVCGTGLTSTDDAAGQQIGQDCGLCGWSTTWQVSLSLEG
Ga0335073_112416252	3300033134	Soil	MSTATTWRTDDPCPVCGTGLHHTDDGTSVITQDCPLCGWSATWQADLDGEAA
Ga0335073_117396602	3300033134	Soil	MNAVTRWRTDDPCPVCGTGLTATDNPAGQQIAQDCGLCGWSTTWQVSLSLEGLLR
Ga0335077_121028942	3300033158	Soil	TTTTWRTDDPCPVCGTGLHHTDDGAVITQDCPLCGWSAAWTGGDADD
Ga0318519_107104812	3300033290	Soil	MNTLTRWRTDDPCPACGTGLHTTDNDAASITQDCPLCGWSATWQAAMDGEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences