Metagenome / Metatranscriptome Family F072874

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072874
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	75 residues
Representative Sequence	VSELVREATREGRRVALLRCYDGAGETIVEAEVTSVRGGDPVRRGPYRFRTATDAFKFVQEALLALQYLGCNVT
Number of Associated Samples	96
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.53 %
% of genes near scaffold ends (potentially truncated)	26.45 %
% of genes from short scaffolds (< 2000 bps)	85.95 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (61.983 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (9.917 % of family members)
Environment Ontology (ENVO)	Unclassified (35.537 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 34.31% Coil/Unstructured: 49.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.297.1.1: WGR domain-like	d2cr9a1	2cr9	0.75
c.37.1.12: P-loop containing nucleoside triphosphate hydrolases	d1qhla_	1qhl	0.63
c.55.1.0: Actin-like ATPase domain	d4h0pa1	4h0p	0.62
b.55.1.5: PH domain-like	d2al6a2	2al6	0.61
b.29.1.0: Concanavalin A-like lectins/glucanases	d4bpza1	4bpz	0.61

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00437	T2SSE	18.18
PF07963	N_methyl	4.13
PF05157	T2SSE_N	3.31
PF01850	PIN	1.65
PF07883	Cupin_2	0.83
PF01402	RHH_1	0.83
PF03118	RNA_pol_A_CTD	0.83
PF06750	DiS_P_DiS	0.83
PF04073	tRNA_edit	0.83
PF04151	PPC	0.83
PF13231	PMT_2	0.83
PF13633	Obsolete Pfam Family	0.83
PF11104	PilM_2	0.83
PF04075	F420H2_quin_red	0.83
PF07676	PD40	0.83
PF01478	Peptidase_A24	0.83
PF12833	HTH_18	0.83
PF01590	GAF	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	2.48
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.98 %
Unclassified	root	N/A	38.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.98 %
Unclassified	root	N/A	38.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.98 %
Unclassified	root	N/A	38.02 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.02 %
Unclassified	root	N/A	38.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.80 %
Unclassified	root	N/A	38.02 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.09 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.26 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	1.65 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.26 %
Candidatus Curtissbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Curtissbacteria	1.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.26 %
Candidatus Curtissbacteria bacterium RBG_13_35_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Curtissbacteria → Candidatus Curtissbacteria bacterium RBG_13_35_7	1.65 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.26 %
Candidatus Curtissbacteria bacterium RBG_13_35_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Curtissbacteria → Candidatus Curtissbacteria bacterium RBG_13_35_7	1.65 %
Pseudomonas sp. Boi14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2007427000\|2007447061	Not Available	885	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig83306	Not Available	622	Open in IMG/M
2140918007\|ConsensusfromContig184122	Not Available	713	Open in IMG/M
2170459005\|F1BAP7Q02JUQM0	Not Available	504	Open in IMG/M
3300001398\|JGI20207J14881_1035608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300004091\|Ga0062387_101184814	Not Available	597	Open in IMG/M
3300005327\|Ga0070658_10051989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3322	Open in IMG/M
3300005327\|Ga0070658_10122763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2159	Open in IMG/M
3300005327\|Ga0070658_10257814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1480	Open in IMG/M
3300005327\|Ga0070658_10352901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1259	Open in IMG/M
3300005327\|Ga0070658_11508210	Not Available	583	Open in IMG/M
3300005329\|Ga0070683_100954012	Not Available	823	Open in IMG/M
3300005336\|Ga0070680_101391729	Not Available	607	Open in IMG/M
3300005339\|Ga0070660_101775600	Not Available	525	Open in IMG/M
3300005354\|Ga0070675_101723084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300005367\|Ga0070667_100027144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4765	Open in IMG/M
3300005455\|Ga0070663_101708256	All Organisms → cellular organisms → Bacteria → Terrabacteria group	563	Open in IMG/M
3300005458\|Ga0070681_10575408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300005458\|Ga0070681_10886904	All Organisms → cellular organisms → Bacteria → Terrabacteria group	810	Open in IMG/M
3300005467\|Ga0070706_101670972	Not Available	580	Open in IMG/M
3300005468\|Ga0070707_101259986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300005524\|Ga0070737_10000234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	133223	Open in IMG/M
3300005529\|Ga0070741_10470093	Not Available	1142	Open in IMG/M
3300005532\|Ga0070739_10107141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1566	Open in IMG/M
3300005535\|Ga0070684_100970117	Not Available	797	Open in IMG/M
3300005535\|Ga0070684_101663915	Not Available	602	Open in IMG/M
3300005536\|Ga0070697_101847698	Not Available	541	Open in IMG/M
3300005538\|Ga0070731_10092955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1998	Open in IMG/M
3300005538\|Ga0070731_10770324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300005563\|Ga0068855_101155495	Not Available	807	Open in IMG/M
3300005563\|Ga0068855_101971614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005607\|Ga0070740_10003536	All Organisms → cellular organisms → Bacteria	16463	Open in IMG/M
3300005614\|Ga0068856_101635177	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_101421880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. Boi14	1304	Open in IMG/M
3300005764\|Ga0066903_104449086	Not Available	748	Open in IMG/M
3300005764\|Ga0066903_106078365	Not Available	632	Open in IMG/M
3300007265\|Ga0099794_10284284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Curtissbacteria → Candidatus Curtissbacteria bacterium RBG_13_35_7	855	Open in IMG/M
3300009093\|Ga0105240_11179512	All Organisms → cellular organisms → Bacteria → Terrabacteria group	812	Open in IMG/M
3300009525\|Ga0116220_10281224	All Organisms → cellular organisms → Bacteria → Terrabacteria group	730	Open in IMG/M
3300009545\|Ga0105237_12483917	Not Available	528	Open in IMG/M
3300009551\|Ga0105238_12372095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300009649\|Ga0105855_1174584	All Organisms → cellular organisms → Bacteria → Terrabacteria group	634	Open in IMG/M
3300009660\|Ga0105854_1061260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300009662\|Ga0105856_1109027	Not Available	814	Open in IMG/M
3300010371\|Ga0134125_10213171	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2148	Open in IMG/M
3300010371\|Ga0134125_12612914	Not Available	549	Open in IMG/M
3300010376\|Ga0126381_104484311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300010396\|Ga0134126_10369347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1670	Open in IMG/M
3300010880\|Ga0126350_11186030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300012202\|Ga0137363_11585643	Not Available	546	Open in IMG/M
3300012205\|Ga0137362_10510246	Not Available	1039	Open in IMG/M
3300012207\|Ga0137381_11745908	Not Available	512	Open in IMG/M
3300012209\|Ga0137379_11531185	Not Available	567	Open in IMG/M
3300012362\|Ga0137361_10963220	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Curtissbacteria → Candidatus Curtissbacteria bacterium RBG_13_35_7	772	Open in IMG/M
3300012363\|Ga0137390_10784962	Not Available	911	Open in IMG/M
3300012982\|Ga0168317_1040845	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1210	Open in IMG/M
3300013104\|Ga0157370_10381517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1298	Open in IMG/M
3300013104\|Ga0157370_11475941	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300013105\|Ga0157369_10021148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7274	Open in IMG/M
3300013105\|Ga0157369_10040118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5113	Open in IMG/M
3300013105\|Ga0157369_10228680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1945	Open in IMG/M
3300013105\|Ga0157369_10457030	Not Available	1322	Open in IMG/M
3300013105\|Ga0157369_11101790	Not Available	812	Open in IMG/M
3300014501\|Ga0182024_10104203	All Organisms → cellular organisms → Bacteria	4119	Open in IMG/M
3300014501\|Ga0182024_11640712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300014502\|Ga0182021_13705509	All Organisms → cellular organisms → Bacteria → Terrabacteria group	507	Open in IMG/M
3300015374\|Ga0132255_104284161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300016341\|Ga0182035_11537261	All Organisms → cellular organisms → Bacteria → Terrabacteria group	599	Open in IMG/M
3300016357\|Ga0182032_11045921	Not Available	699	Open in IMG/M
3300017947\|Ga0187785_10027139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2059	Open in IMG/M
3300018029\|Ga0187787_10173778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300019888\|Ga0193751_1017518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3600	Open in IMG/M
3300020070\|Ga0206356_11826006	Not Available	518	Open in IMG/M
3300021344\|Ga0193719_10026530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2490	Open in IMG/M
3300021560\|Ga0126371_12940585	All Organisms → cellular organisms → Bacteria → Terrabacteria group	577	Open in IMG/M
3300025679\|Ga0207933_1010819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4364	Open in IMG/M
3300025906\|Ga0207699_11162899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300025909\|Ga0207705_10164677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1667	Open in IMG/M
3300025909\|Ga0207705_10293378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300025909\|Ga0207705_10308702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1214	Open in IMG/M
3300025909\|Ga0207705_10508137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300025913\|Ga0207695_11158597	Not Available	653	Open in IMG/M
3300025919\|Ga0207657_11309369	Not Available	547	Open in IMG/M
3300025944\|Ga0207661_10237491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1616	Open in IMG/M
3300025949\|Ga0207667_10230322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1897	Open in IMG/M
3300025949\|Ga0207667_11603682	All Organisms → cellular organisms → Bacteria → Terrabacteria group	619	Open in IMG/M
3300025986\|Ga0207658_10018823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4775	Open in IMG/M
3300027706\|Ga0209581_1006119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8941	Open in IMG/M
3300027773\|Ga0209810_1188732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	828	Open in IMG/M
3300027869\|Ga0209579_10077341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1760	Open in IMG/M
3300027869\|Ga0209579_10179216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1133	Open in IMG/M
3300027905\|Ga0209415_10100661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3173	Open in IMG/M
3300027908\|Ga0209006_10601138	All Organisms → cellular organisms → Bacteria → Terrabacteria group	908	Open in IMG/M
3300028573\|Ga0265334_10192979	All Organisms → cellular organisms → Bacteria → Terrabacteria group	709	Open in IMG/M
3300028577\|Ga0265318_10044882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1672	Open in IMG/M
3300028577\|Ga0265318_10118882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300028800\|Ga0265338_10626003	Not Available	748	Open in IMG/M
3300028800\|Ga0265338_10671350	Not Available	717	Open in IMG/M
3300028828\|Ga0307312_10509827	Not Available	794	Open in IMG/M
3300031247\|Ga0265340_10074061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1611	Open in IMG/M
3300031251\|Ga0265327_10232278	Not Available	826	Open in IMG/M
3300031544\|Ga0318534_10130388	Not Available	1447	Open in IMG/M
3300031546\|Ga0318538_10833823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	501	Open in IMG/M
3300031670\|Ga0307374_10630763	Not Available	534	Open in IMG/M
3300031672\|Ga0307373_10540382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300031711\|Ga0265314_10460644	Not Available	676	Open in IMG/M
3300031765\|Ga0318554_10293433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300031768\|Ga0318509_10793090	Not Available	524	Open in IMG/M
3300031910\|Ga0306923_12364289	Not Available	528	Open in IMG/M
3300031962\|Ga0307479_10260898	Not Available	1712	Open in IMG/M
3300031996\|Ga0308176_10656049	Not Available	1084	Open in IMG/M
3300032008\|Ga0318562_10890788	Not Available	508	Open in IMG/M
3300032009\|Ga0318563_10729373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300032060\|Ga0318505_10276785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300032074\|Ga0308173_11204705	All Organisms → cellular organisms → Bacteria → Terrabacteria group	708	Open in IMG/M
3300032180\|Ga0307471_102701821	Not Available	630	Open in IMG/M
3300032180\|Ga0307471_103008674	Not Available	598	Open in IMG/M
3300032261\|Ga0306920_100441111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1934	Open in IMG/M
3300032783\|Ga0335079_11662834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300032805\|Ga0335078_10000017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	317472	Open in IMG/M
3300032955\|Ga0335076_10615799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.94%
Host-Associated	Host-Associated	33.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.29%
Plants	Host-Associated → Plants	33.06%
Aquatic	Environmental → Aquatic	1.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.96%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Geologic	Environmental → Terrestrial → Geologic	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.01%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Clay	Environmental → Terrestrial → Soil → Clay	1.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Mine	Environmental → Terrestrial → Geologic → Mine	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	6.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.65%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2007427000	Uranium contaminated groundwater from Oak Ridge Integrated Field Research Center, Tennessee	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2007453844	2007427000	Groundwater	MSGELVREVTRDGHTVARLRCYDADGMTIVEAEVTPPGASYPVRRGPYRFATAPDAFRFVQEALLALQYLGCRVA
A5_c1_00438200	2124908044	Soil	RQHAPVTGAQIVREALIDGRRVAVMRCFDGEGATIVEVEVIPTDSDIPVSRGPYRFTTAHEAFRFMQEALLALQYLGCSVAST
A_all_C_00094460	2140918007	Soil	VTGVELVREALIDGRRVAVMRCFDGEGATIVEVEVIPTDSDIPVSRGPYRFTTAHEAFRFMQEALLALQYLGCSVAST
E41_01194700	2170459005	Grass Soil	VSIELVREVTKDGHRIARLRCYDLEGATIVEAEVLPQGETAPVRRGPYRFATPPEAFRFVQEAVLALQYLGCTITP
JGI20207J14881_10356082	3300001398	Arctic Peat Soil	VSELIREAMRDGRRVALLRCYDDGGTAVVEAQITPHHANSISVARGPYRFTTAADAFRFVQEALLALQYLGCTVT*
Ga0062387_1011848142	3300004091	Bog Forest Soil	MSGELVREATRDGRTVARLRCYDAEGATIVDAELLPQGAEYPSRRGPYRFATAPEAFRFVQEALLALQYLGCRVG*
Ga0070658_100519892	3300005327	Corn Rhizosphere	VTALVREATREGRRVAVIRCYDGDGETIVEAELTPVRGGVPVARGPYRFPAATDAFRFVQEALLALQYLGCVVE*
Ga0070658_101227634	3300005327	Corn Rhizosphere	VSELVREATREGRRVALLRCYDGAGETIVEAEVTSIRGGEPVRRGPYRFRTATDAFKFVQEALLALQYLGCNLT*
Ga0070658_102578142	3300005327	Corn Rhizosphere	VSELVREATREGRRVALLRCYDGAGETIVEAEVTSVRGGDPVRRGPYRFRTATDAFKFVQEALLALQYLGCNVT*
Ga0070658_103529013	3300005327	Corn Rhizosphere	VTELIREATREGRRVAIIRCYDGNGETIVEAQLTPMRGGDPVDRGPYRFPTATDAFRFVQEALLALQYLGCAVQQ*
Ga0070658_115082101	3300005327	Corn Rhizosphere	VSELIREATRDGRRVALLRCYDDNGTAVVEAQITPHHANSVPVARGPYRFTTAADAFRFVQEALLALQYLGCTVT*
Ga0070683_1009540121	3300005329	Corn Rhizosphere	VSGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPVNSEIPVGRGPYRFTTAHEAFRFMQEALLALQYLGCSVVST*
Ga0070680_1013917291	3300005336	Corn Rhizosphere	MSGLEREVTRDGRRVALLRCYDAFDATVVEAEVTPAGARDVIRRGPYRFASATDAFRFVQEALLALQHLGCTVR*
Ga0070660_1017756001	3300005339	Corn Rhizosphere	MSELVREATRDGRRVAVLRCYDGEGGETIVEAEITPTRGGDAVRRGPYRFHTAPEAFRFVQE
Ga0070675_1017230841	3300005354	Miscanthus Rhizosphere	VTGAQLVREALIDGRRVALLRCFDGEGATIVEVEVVPVNSDVPVQRGPYRFTTAHEAFRFMQEALLALQYL
Ga0070667_1000271443	3300005367	Switchgrass Rhizosphere	MSELTREVLFEGHRLAFVRCYDGVDGMTVVEAEVQRGAEVGPVGRGPYRFASATEAFRFVQEALLALQYLGCTVATQATPAAPALS*
Ga0070663_1017082561	3300005455	Corn Rhizosphere	GRRVALLRCYDAEGATIVEAEVIPVGSLDPVRRGPYRFATATEAFRFVQESLLALQYLGCTVGPTA*
Ga0070681_105754082	3300005458	Corn Rhizosphere	VTGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPTSSDIPVSRGPYRFTTAHEAFRFMQEALLALQYLGCSVIST*
Ga0070681_108869041	3300005458	Corn Rhizosphere	MSELVREAVKDGRRVALLRCYDAFDATVVEAEVTPAGAQDVIRRGPYRFASATDAFRFVQEALLALQHLGCTVR*
Ga0070706_1016709722	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTGAQLVREASINGRRVALMRCYDGDGATIVEVEVLPADSELPVSRGPYRFSTAHEAFRFMQEAL
Ga0070707_1012599861	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IEGRRVALLRCYDGEGATIVEVEVVPTDSEVPVRRGPYRFATAHEAFRFMQETLLALQYLGCSVVTA*
Ga0070737_1000023414	3300005524	Surface Soil	VTAELVREATRDGRRVALFRCFDGDDGATIVEAEVTTPAGERVRRGPYRFATAHDALRFVQEATLALQYLGCSVGGG*
Ga0070741_104700932	3300005529	Surface Soil	LSELVREATREGRRVAILRCYDGVAETIVEAEVTSVRGGGMVRRGPYRFRTATEAFRFVQEALLALQYLGCQVG*
Ga0070739_101071412	3300005532	Surface Soil	MSAELVREATRAGRRVALLRCYDAADGATVVEAEVVPQNGGTPIRRGPYRFPTAHDAFRFVQEATLALQYLGCAVS*
Ga0070684_1009701172	3300005535	Corn Rhizosphere	VSELVREATREGRRVAVLRCYDGDGVTIVEAEVSPVRGGELVRRGPYRFRTATDAFRFVQESLLALQYLGCAVQ*
Ga0070684_1016639152	3300005535	Corn Rhizosphere	VSELVREATREGRRVALLRCYDGVGETIVEAEVTSVRGGEPVRRGPYRFRTATDAFKFVQEALLALQYLGCNVT*
Ga0070697_1018476981	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTQLLREAVKDGQRVALLRCYDAPGGGIVVEAEVTPLRGSETIRRGPYRFASAPEAFRFVQESMLALQYLGCTLT*
Ga0070731_100929552	3300005538	Surface Soil	VSELLREATRDGQRVALLRCYDGAGETIVEAQVVPVRGGEPVRRGPYRFRTATDAFRFVQETLLALQYLGCQIG*
Ga0070731_107703242	3300005538	Surface Soil	MSGELLREATRDGRTVARLRCYDADGATIVDAEVLAQGAEYPLRRGPYRFATAPEAFRFVQEALLALQYLGCRVG*
Ga0068855_1011554952	3300005563	Corn Rhizosphere	VSELVREATREGRRVALLRCYDGAGETIVEAEVTSVRGGEPVRRGPYRFRTATDAFKFVQEALLALQYLGCNVT*
Ga0068855_1019716142	3300005563	Corn Rhizosphere	MSAALVREAVKDGRRVALLRCFDAPEGGSIVEAEVTGPNGDELRRGPYRFASAHEAFRFVQEALLALQYLGCTVSTV*
Ga0070740_100035369	3300005607	Surface Soil	VTAELVREATRDGRRVALLRCFDGDDGATIVEAEVTTPAGERVRRGPYRFATAHDALRFVQEATLALQYLGCSVGGG*
Ga0068856_1016351772	3300005614	Corn Rhizosphere	VKAELVREALRDGQRVALLRCYDDPSDQATVVEAEIHPTSGPPVKRAYRFVTAPEAFKFVQEALLTLQYLGCKVA*
Ga0066903_1014218802	3300005764	Tropical Forest Soil	VSTELVREATHEGRRVALLRCYDDDDAGGTIVEAQIHPPAGDPVSHGYRFSNAGEAFRFVQEALLALQYLGCQVA*
Ga0066903_1044490862	3300005764	Tropical Forest Soil	VTELVREAIRDGRRIALVRCYDDPNEGGTVVEAEIHPPTGDPVSHGYRFATAPEAFRFVQEALLALQYLGCNVA*
Ga0066903_1060783651	3300005764	Tropical Forest Soil	VSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPTVGEPVSHGYRFSSAAEAFKFVQEALLALQYLGCQVA*
Ga0099794_102842841	3300007265	Vadose Zone Soil	GAQLVREASIDGRRVALMRCYDGDGATIVEVEVLPADSEIPVSRGPYRFSTAHEAFRFMQEALLALQYLGCSVVSA*
Ga0105240_111795122	3300009093	Corn Rhizosphere	MSGLEREVTRDGRRVALLRCYDAEGATIVEAEVTPVGSLDPVRRGPYRFATATEAFRFVQESLLALQYLGCTVGPTA*
Ga0116220_102812242	3300009525	Peatlands Soil	VTGAQLVREAMIDGRRVALLRCYDGDGVTTVEVEVIPDGSDAAVSCGPYSFATAHEAFRFMQEALLALQYLGCSVVSA*
Ga0105237_124839172	3300009545	Corn Rhizosphere	RAGRREHASVTGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPTSSDIPVNRGPYRFTTAHEAFRFMQEALLALQYLGCLVIST*
Ga0105238_123720951	3300009551	Corn Rhizosphere	GRRVALLRCYDGDGVTVVEAEIVPVRGGAPVTRGPYRFSSATEAFRFVQEALLALQYLGCEVA*
Ga0105855_11745842	3300009649	Permafrost Soil	MSGELVREVTRDGRTVARLRCYDADGMTIVDAEVTPQGAPYPVRRGPYRFATAPDAFRFVQESLLALQYLGCRVG*
Ga0105854_10612602	3300009660	Permafrost Soil	MAAELIREVTRDGRWVARLRCYDGDAGAIVDAQVAPAGGGEPLRRGPYRFATAHDALHFVQEATLALQYLGCSVT*
Ga0105856_11090271	3300009662	Permafrost Soil	MSGELVREVTRDGRTVARLRCYDADGMTFVDAEVTPPGAPYPVSRGPYRFANAPDAFRFVQEALLALQYLGCRVA*
Ga0134125_102131713	3300010371	Terrestrial Soil	VSELVREALKDGRRVALLRCYDAAGSTIVDAEIVPAGSSDPVHRGPYHFASATDAFRFVQEALLALQYLGCSVA*
Ga0134125_126129141	3300010371	Terrestrial Soil	VSELLREATRDGRRLALLRCYDGDGATIVEAEVTPVGAVQPVPRGPYRFQSATDAFRFVQETLLALQYLG
Ga0126381_1044843112	3300010376	Tropical Forest Soil	VSAELVREATHEGRRVALLRCYDDDDAGGTIVEAQIHPPSGDPVSHGYRFSSAAEAFRFVQEALLALQYLGCQVA*
Ga0134126_103693471	3300010396	Terrestrial Soil	RWSRRPPPTRAVEDDAVSELVREALKDGRRVALLRCYDAAGSTIVDAEIVPAGSHDPVHRGPYHFASATDAFRFVQEALLALQYLGCSVA*
Ga0126350_111860302	3300010880	Boreal Forest Soil	MSGELLREATRDGRTVARLRCYDADGATIVDAEVLAQGAEYPLRRGPYRFATAPEAFRFVQEALLALQYVGCRVG*
Ga0137363_115856431	3300012202	Vadose Zone Soil	VTGAQLVREASIDGRRVALMRCYDGDGATIVEVEVLPADSEIPVSRGPYRFSTAHEAFRFMQEALLALQYLGCSVVSV*
Ga0137362_105102462	3300012205	Vadose Zone Soil	VTGAQLVREASIDGRRVALMRCYDGDGATIVEVEVLPADSEIPVSRGPYRFSTAHEAFRFMQEALLALQYLGCSVVSI*
Ga0137381_117459082	3300012207	Vadose Zone Soil	RRRAGRRQHAPVTGAQLVREATIDGRRVALMRCYDGDGATIVEVEVVPTDSDIPVTRGPYRFATAHEAFRFMQEALLALQYLGCSVASG*
Ga0137379_115311851	3300012209	Vadose Zone Soil	VTGAQIVREATIDGRRVALMRCYDGVGATIVEVEVVPTNSNIPVSRGPYRFTTAHEAFRFMQEALLALQYLGCSVVST*
Ga0137361_109632202	3300012362	Vadose Zone Soil	VIDGRRDALLRCYDGEGATIVDVEVVPTNSNIPVRRGPYRFATAHEAFRFMQEALLALQYLGCSVVSI*
Ga0137390_107849622	3300012363	Vadose Zone Soil	VTGAQLVREASINGRRVALMRCYDGDGATIVEVEVLPADSELPVSRGPYRFSTAHEAFRFMQEALLALQYLGCSVVSV*
Ga0168317_10408453	3300012982	Weathered Mine Tailings	VSELIREATRDGRRVALLRCYDADGATVVEAEVTPPGSDTTVRRGPYRFETATEAFRFVQETLLALQYLGCRVP*
Ga0157370_103815173	3300013104	Corn Rhizosphere	VTGAQSVREALIDGRRVALMRCYDGEGATIVEVEVVPTSSDIPVNRGPYRFTTAHEAFRFMQEALLALQYLGCSVIST*
Ga0157370_114759412	3300013104	Corn Rhizosphere	VTALVREATREGRRVAVIRCYDGDGETIVEAELTPVRGGVPVARGPYRFPAATDAFRFVQEALLALQYLGCAVQQ*
Ga0157369_100211485	3300013105	Corn Rhizosphere	VSELVREATREGRRVAVLRCYDGEGVTIVEAEVSPVRGGDLVQRGPYRFRTATDAFRFVQESLLALQYLGCAVQ*
Ga0157369_100401185	3300013105	Corn Rhizosphere	VTELVREATREGRRVALIRCYDGEGETIVEAQVTPARGGDPVNRGPYRFPAATDAFRFVQEALLALQYLGCSVE*
Ga0157369_102286801	3300013105	Corn Rhizosphere	REALIDGRRVALMRCYDGEGATIVEVEVVPTSSDIPVNRGPYRFTTAHEAFRFMQEALLALQYLGCSVIST*
Ga0157369_104570303	3300013105	Corn Rhizosphere	RERPMSELIREATRDGRRIALLRCYDSDGGTLVEAEVTSSRGGSPVRRGPYHFETAPDAFRFVQEALLALQYLGCNVT*
Ga0157369_111017902	3300013105	Corn Rhizosphere	VSELIREATRDGRRVALLRCYDGDGVTIVEADVTPVRGGDLVQRGPYRFRTATDAFRFIQESLLALQYLGCTVG*
Ga0182024_101042035	3300014501	Permafrost	VSAELVREATRDGRPVARLRCYDDPGGGTVVEAEVLPPGAGEPLRRGPYRFASATEAFRFVQETVLALQYLGCSVV*
Ga0182024_116407121	3300014501	Permafrost	LSAVLVREATHDGRRIVLLRCYDDPAGGSIVEAQVQPEGGGNPLARGPYRFANAHEAFRFVQEALLTLQYLGCTVVTA*
Ga0182021_137055092	3300014502	Fen	VSAELVREAMRDGRCVVRFRCFDVVDATVVEAEVTPPGAVESVPRGPYRFASASEAFRFVQESLLALQYLGCTVS*
Ga0132255_1042841612	3300015374	Arabidopsis Rhizosphere	QDGDCPSGRRLTALTPELVREATRDGRRVALLRCYDDPDEGATIVEAEIHPTDSEPVSRGYRFSTAPEAFRFVQEALLALQYLGCNVA*
Ga0182035_115372612	3300016341	Soil	VSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPTAGEPVSHGYRFSSAAEAFKFVQEALLALQYLGCQVV
Ga0182032_110459212	3300016357	Soil	VSAELVREATHEGRRVALLRCYDDTDAGGTIVEAQIHPTAGDPVSHGYRFANAGEAFRFVQEALLALQYLGCQVA
Ga0187785_100271392	3300017947	Tropical Peatland	VSAELVREASRDGHRVALLRCYDGMDGTTVVEAEVSANGNEPVKRGPYRFATATEAFRFVQEATLALQYLGCTVA
Ga0187787_101737782	3300018029	Tropical Peatland	GRGEVSAELVREASRDGHRVALLRCYDGMDGTTVVEAEVSANGNAPVKRGPYRFATATEAFRFVQEATLALQYLGCTVS
Ga0193751_10175182	3300019888	Soil	VTGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPTNSDIPVSRGPYRFTTAHEAFRFMQEALLALQYLGCSVVST
Ga0206356_118260061	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VTGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPTSSDIPVNRGPYRFTTAHEAFRFMQEALLALQYLGC
Ga0193719_100265304	3300021344	Soil	MTGAELVREAVIDGRRVALLRCYDGEGATIVDVEVVPTNSNIPVRRGPYRFATAHEAFRFMQEALLALQYLGCSVVSA
Ga0126371_129405851	3300021560	Tropical Forest Soil	AGRLRRQDGRSPGRRQLPRVSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPAAGEPVSHGYRFSSAAEAFKFVQEALLALQYLGCQVV
Ga0207933_10108193	3300025679	Arctic Peat Soil	VSELIREAMRDGRRVALLRCYDDGGTAVVEAQITPHHANSISVARGPYRFTTAADAFRFVQEALLALQYLGCTVT
Ga0207699_111628992	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VKAELVREALRDGQRVALLRCYDDPSDQATVVEAEIHPASGPPVKRAYRFVTAPEAFKFVQEALLTLQYLGCKVA
Ga0207705_101646773	3300025909	Corn Rhizosphere	VTELIREATREGRRVAIIRCYDGNGETIVEAQLTPMRGGDPVDRGPYRFPTATDAFRFVQEALLALQYLGCAVQQ
Ga0207705_102933782	3300025909	Corn Rhizosphere	VSELVREATREGRRVALLRCYDGAGETIVEAEVTSVRGGDPVRRGPYRFRTATDAFKFVQEALLALQYLGCNVT
Ga0207705_103087021	3300025909	Corn Rhizosphere	TREGRRVALLRCYDGPGETIVEAEVTSVRGGEPVRRGPYRFRTATDAFKFVQEALLALQYLGCNLT
Ga0207705_105081372	3300025909	Corn Rhizosphere	VTALVREATREGRRVAVIRCYDGDGETIVEAELTPVRGGVPVARGPYRFPAATDAFRFVQEALLALQYLGCVVE
Ga0207695_111585972	3300025913	Corn Rhizosphere	MSGLEREVTRDGRRVALLRCYDAEGATIVEAEVTPVGSLDPVRRGPYRFATATEAFRFVQESLLALQYLGCTVGPTA
Ga0207657_113093692	3300025919	Corn Rhizosphere	MSELVREATRDGRRVAVLRCYDGEGGETIVEAEITPTRGGDAVRRGPYRFHTAPEAFRFVQESLLALQY
Ga0207661_102374914	3300025944	Corn Rhizosphere	VSGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPVNSEIPVGRGPYRFTTAHEAFRFMQEALLALQYLGCSVVST
Ga0207667_102303222	3300025949	Corn Rhizosphere	VTGAQIVREALIDGRRVALMRCYDGEGATIVEVEVVPTSSDIPVNRGPYRFTTAHEAFRFMQEALLALQYLGCSVIST
Ga0207667_116036822	3300025949	Corn Rhizosphere	MSGLEREVTRDGRRVALLRCYDAEGATIVEAEVIPVGSLDPVRRGPYRFATATEAFRFVQESLLALQYLGCTVGPTA
Ga0207658_100188234	3300025986	Switchgrass Rhizosphere	MSELTREVLFEGHRLAFVRCYDGVDGMTVVEAEVQRGAEVGPVGRGPYRFASATEAFRFVQEALLALQYLGCTVATQATPAAPALS
Ga0209581_100611910	3300027706	Surface Soil	VTAELVREATRDGRRVALFRCFDGDDGATIVEAEVTTPAGERVRRGPYRFATAHDALRFVQEATLALQYLGCSVGGG
Ga0209810_11887322	3300027773	Surface Soil	MSAELVREATRAGRRVALLRCYDAADGATVVEAEVVPQNGGTPIRRGPYRFPTAHDAFRFVQEATLALQYLGCAVS
Ga0209579_100773412	3300027869	Surface Soil	VSELLREATRDGQRVALLRCYDGAGETIVEAQVVPVRGGEPVRRGPYRFRTATDAFRFVQETLLALQYLGCQIG
Ga0209579_101792162	3300027869	Surface Soil	MSGELLREATRDGRTVARLRCYDADGATIVDAEVLAQGAEYPLRRGPYRFATAPEAFRFVQEALLALQYLGCRVG
Ga0209415_101006613	3300027905	Peatlands Soil	VTGAQLVREAMIDGRRVALLRCYDGDGVTTVEVEVIPDGSDAAVSCGPYSFATAHEAFRFMQEALLALQYLGCSVVSA
Ga0209006_106011382	3300027908	Forest Soil	MSGELVREATRDGRTVAKLRCYDAEGATIVDAEVLAHGAEFPLRRGPYRFSTAPDAFRFVQEALLALQYLGCRVG
Ga0265334_101929792	3300028573	Rhizosphere	MSGELIREVTRDGRTVARLRCYDADGMTIVDAEVTPQGAPYPVRRGPYRFATAPDAFRFVQEALLALQYLGCRVG
Ga0265318_100448822	3300028577	Rhizosphere	MSGELIREVTRDGRTVARLRCYDADGMTIVDAEVTPQGAPYPIRRGPYRFATAPDAFRFVQEALLALQYLGCRVG
Ga0265318_101188822	3300028577	Rhizosphere	MSGELVREVTRDGRTVARLRCYDAGGMTIVDAEVTPPGAPAPVRRGPYRFATAPDAFRFVQEALLALQYLGCRVG
Ga0265338_106260031	3300028800	Rhizosphere	MSGELIREAMRDGRAVARLRCYDADGATIVDAELLPPGAGYPVRRGPYRFATAPEAFRFVQEALLALQYLGCTVG
Ga0265338_106713502	3300028800	Rhizosphere	MSGELLREATRDGRTVARLRCYDAEGATIVDAELLPQGAEYPFRRGPYRFATAPEAFRFVQEALLALQ
Ga0307312_105098271	3300028828	Soil	MTGAELVREAVIDGRRVALLRCYDGEGATIVDVEVVPTNSNIPVRRGPYRFATAHEAFRFMQEA
Ga0265340_100740612	3300031247	Rhizosphere	MSGELLREATRDGRTVARLRCYDAEGATIVDAELLPQGAEYPFRRGPYRFATAPEAFRFVQEALLALQYLGCRVG
Ga0265327_102322781	3300031251	Rhizosphere	LTNALVRKAVRDGKGVAMLRCVDGPEGQTIVEAEVIGANGAPVRRGPYTFRNAHEAFRFVQEATLALQYLGCVVT
Ga0318534_101303884	3300031544	Soil	VSELVREATRDGRRVALLRCYDGDGETVVEAEVTTRDGGTVKRGPYRFPNATEAFRFVQESLLALQYLG
Ga0318538_108338232	3300031546	Soil	VSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPAAGEPVSHGYRFSSAAEAFKFVQEALLALQYLGCQVV
Ga0307374_106307631	3300031670	Soil	MSVALVREASYDGRRIALLRCFDTDDATIVEAEVLPPGATQPVRRGPYRFATAPEAFRFVQETLLALQYLGCQIP
Ga0307373_105403822	3300031672	Soil	VSTQLVRTAMQDGRRVAVLRCYDTDGATIVEAEVLRAGATDPVRRGPYRFATAPEAFRFVQEALLALQYLGCQVS
Ga0265314_104606442	3300031711	Rhizosphere	MSGELLREATRDGRTVARLRCYDAEGATIVDAELLPQGAEYPLRRGPYRFATAPEAF
Ga0318554_102934332	3300031765	Soil	VSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPQAGDPVSHGYRFSSAAEAFRFVQEALLALQYLGCQVV
Ga0318509_107930902	3300031768	Soil	VSTELVREAMRDGRRVALLRCYDDSEQSATIVEAEIHPAAGDPVNRGYRFGTAPEAFRFVQEALLALQYLGCNVA
Ga0306923_123642891	3300031910	Soil	VSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPTVGEPVSHGYRFSSAAEAFKFVQEALL
Ga0307479_102608982	3300031962	Hardwood Forest Soil	VTGAQIVREAVIDGRRVALMRCYEVEVVPTDSEIPVSRGPYRFTTAHEAFRFMQEALLALQYLGCSVVST
Ga0308176_106560492	3300031996	Soil	VSELLREATRDGRRVALLRCYDGDGATVVEAEVTPAGALQPVQRGPYRFQNATDAFRFVQEALLALQYLGCAVQ
Ga0318562_108907881	3300032008	Soil	VSAELVREATHEGRRVALLRCYDDTDQGGTVVEAQIHPQAGDPVSHGYRFSSAAEAFRFVQEALLAL
Ga0318563_107293731	3300032009	Soil	TELVREAVRDGRRVALVRCYDDPNEGGTVVEAEIHPPTGDPVSHGYRFATAPEAFRFVQEALLALQYLGCNVA
Ga0318505_102767852	3300032060	Soil	RSPVSELVREATRDGRRVALLRCYDGDGETVVEAEVTTRDGGTVKRGPYRFPNATEAFRFVQESLLALQYLGCTVG
Ga0308173_112047052	3300032074	Soil	VSELVREALKDGRRVALLRCYDAAGSTIVDAEIVPAGAHDPVHRGPYHFASATDAFRVVQEALLALQYLGCSVA
Ga0307471_1027018212	3300032180	Hardwood Forest Soil	LNAQLVREATQDGRQVAILRCYDSEGMTVVEAEVLPVGADEPVRRGPYRFETAPDAFRFVQEALLALQYLGC
Ga0307471_1030086742	3300032180	Hardwood Forest Soil	VTQLLREAVKDGQRVALLRCYDAPGGIVVEAEVTPLRGSETIRRGPYRFASAPEAFRFVQESMLALQYLGCTVAEPD
Ga0306920_1004411111	3300032261	Soil	VSELVREATRDGRRVALLRCYDGDGETVVEAEVTTRDGGTVKRGPYRFPNATEAFRFVQESLLALQYL
Ga0335079_116628342	3300032783	Soil	VTAELVREAIYGDRCVAHFRCYDDRGGSAVEAQVTPVDGGEPVNRGPYWFPTAHDAFRFLQEASLALQYLGCTVS
Ga0335078_100000178	3300032805	Soil	VTGAQLVREATMDGRRVALLRCYDGDGVTTVEVEVVPDGSETAVNCGPYRFATAHEAFRFMQEALLALQYLGCSVVSA
Ga0335076_106157992	3300032955	Soil	MPPELVREATRGGRRVVLLRCYDGTDGHTVVEAEVSPLAGGNAVRRGPYRFPSAAEGFRFVQETVLALQYLGCSVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072874

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences