Basic Information | |
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Family ID | F073131 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 120 |
Average Sequence Length | 51 residues |
Representative Sequence | MNFSRAWFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGT |
Number of Associated Samples | 108 |
Number of Associated Scaffolds | 120 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 16.67 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 95.00 % |
Associated GOLD sequencing projects | 103 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.37 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (56.667 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.667 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.667 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (45.000 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 34.18% β-sheet: 0.00% Coil/Unstructured: 65.82% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.37 |
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Pfam ID | Name | % Frequency in 120 Family Scaffolds |
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PF00690 | Cation_ATPase_N | 25.00 |
PF04073 | tRNA_edit | 9.17 |
PF00083 | Sugar_tr | 2.50 |
PF00702 | Hydrolase | 2.50 |
PF03976 | PPK2 | 0.83 |
PF02069 | Metallothio_Pro | 0.83 |
COG ID | Name | Functional Category | % Frequency in 120 Family Scaffolds |
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COG0474 | Magnesium-transporting ATPase (P-type) | Inorganic ion transport and metabolism [P] | 25.00 |
COG2326 | Polyphosphate kinase 2, PPK2 family | Energy production and conversion [C] | 0.83 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 56.67 % |
All Organisms | root | All Organisms | 43.33 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 16.67% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 14.17% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 6.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 5.00% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 5.00% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.17% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 3.33% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.33% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.33% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.50% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.50% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 2.50% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.50% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.67% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.67% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.67% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.67% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.67% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.67% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.67% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.83% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.83% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.83% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.83% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.83% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.83% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 0.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.83% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.83% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.83% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.83% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2040502001 | Soil microbial communities from sample at FACE Site 2 North Carolina CO2+ | Environmental | Open in IMG/M |
2088090014 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
2228664022 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300001686 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 | Host-Associated | Open in IMG/M |
3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Host-Associated | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005561 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 | Environmental | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300009800 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
3300010325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG | Environmental | Open in IMG/M |
3300010333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012882 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 | Environmental | Open in IMG/M |
3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015 | Environmental | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300017657 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015 | Environmental | Open in IMG/M |
3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
3300019886 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2 | Environmental | Open in IMG/M |
3300020010 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2 | Environmental | Open in IMG/M |
3300020062 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1 | Environmental | Open in IMG/M |
3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
3300022534 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1 | Environmental | Open in IMG/M |
3300023069 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5 | Environmental | Open in IMG/M |
3300025290 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 | Host-Associated | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300028707 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148 | Environmental | Open in IMG/M |
3300028796 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300028881 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116 | Environmental | Open in IMG/M |
3300030847 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031913 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4 | Environmental | Open in IMG/M |
3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
FACENCE_1477230 | 2040502001 | Soil | VRNTNADMNFLKASFIGLALASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPVVDGVQVHA |
GPIPI_01133430 | 2088090014 | Soil | MNFLKAFLIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVT |
INPgaii200_08547692 | 2228664022 | Soil | MNAFRISLIGLAFLLSAALIALAQTPAAKSTTSSKAIAVLHPTAGNKVSGT |
C688J18823_104847981 | 3300001686 | Soil | MNVLKASFIGLVLASLTGLFALAQTPAAKPAASSKGISVLHATAGNKVSGTVTFTPGADGVQ |
Ga0063356_1045920452 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MNFLKAFLIGLVLVSFAGLIALAQTPTAKSAASSKGISVLHPTADNKVSGTVTFTPVAGGVQVHAE |
Ga0062591_1003142443 | 3300004643 | Soil | MNSFRAWFIGLVFASFAGLFALAQTPAAKSAAPSKGISMLHPTVGNKVSGSVTFTPGADGVQV |
Ga0065714_103262721 | 3300005288 | Miscanthus Rhizosphere | MNFFKASFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFSPG |
Ga0070658_112783341 | 3300005327 | Corn Rhizosphere | MNFFKASFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVNGTVTFSPGADGVQVH |
Ga0066388_1002706822 | 3300005332 | Tropical Forest Soil | MNFLRASIIELMLLTFAGLIALAQTPPEKSAAPSKAIAVLHP |
Ga0066388_1017881991 | 3300005332 | Tropical Forest Soil | MLIMNAFRASFIGLMFLSSAGLVALAQTPAAKSTASSEAIAVLHP |
Ga0070680_1009318161 | 3300005336 | Corn Rhizosphere | MNFLKSSFIGLVLASFAGLFALAQTPAAKSASSSKGISVLHPTAGNKVSGTVTF |
Ga0070682_1012623622 | 3300005337 | Corn Rhizosphere | MNFFKASFIGLVLAFFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFSP |
Ga0070714_1015983713 | 3300005435 | Agricultural Soil | MNFLKASLIGLALASFAGLIALAQTPATKSAASSKAISVLHPTAGNKVSGTVT |
Ga0070706_1013191121 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MRNTDAYMNSSRASLIGLMFLSFAGLIALAQTPAAKSATSSKGISVLHPTAGNKVSGTVTFTPVADGVQ |
Ga0070698_1013624582 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MNFLRASIIELMLLTFAGLMALAQTPAEKSAAPSKAIAVLHPTAGNKVTGTVTFTE |
Ga0066699_100045336 | 3300005561 | Soil | MLIMKAFRASFVGLTCLSFASLVALAQTPATKSTASSKAVAVLHPSAGNKVNGAVTFTPVADG |
Ga0066708_100785593 | 3300005576 | Soil | MNSLRAWFIGLALASFAGFIALAQTPAAKSAASSKGISVLHP |
Ga0068854_1010451262 | 3300005578 | Corn Rhizosphere | MNSFRAWFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTA |
Ga0070702_1014270822 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MNLFKAFFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTF |
Ga0068864_1006133631 | 3300005618 | Switchgrass Rhizosphere | MNLLKAFFIGLALASFAGLIALAQTSATSSKGISVLHPTA |
Ga0066903_1035913943 | 3300005764 | Tropical Forest Soil | VLASFTGLIALAQTPAAKSAAPSKGISVLHPSAGNKVTGTVTFTPV |
Ga0066903_1083770971 | 3300005764 | Tropical Forest Soil | MLIMKTLRASFVGLICLSFANLAAVAQTPDAKSKASSKAIAVLHPTTGNKVNGTVTFTPVADG |
Ga0068851_109849261 | 3300005834 | Corn Rhizosphere | MNFFKASFIGLVLASFTGLFALAQTPAAKSAASSKGISVLHPTAG |
Ga0066652_1006082941 | 3300006046 | Soil | MLIMNAFRASFIGLLFLSFAGLLAVAQTPVSKSTASSKAIVVLHPTAGNKVTGVITFTPVADGVQVHAEI |
Ga0066652_1018200352 | 3300006046 | Soil | MNFLKASFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPVAD |
Ga0099793_100967353 | 3300007258 | Vadose Zone Soil | MNSSRAWFIGLVLASFAGFIALAQTPAAKSAASSKGIS |
Ga0105251_101896242 | 3300009011 | Switchgrass Rhizosphere | MRLDASTRAKYNADMNFFKTSFIGLALALFASLIALAQTPAAKSATSSKGISVLHPTAGNKVSG |
Ga0111539_118735211 | 3300009094 | Populus Rhizosphere | MNLLKAFFIGLALASFAGLIALAQTSATSAAASSKGISVLHPTAGN |
Ga0105245_129164161 | 3300009098 | Miscanthus Rhizosphere | MNFLKASFIGLVLASFAGLFALAQTPAAKSAAPSKGISVLHPTAGNKVS |
Ga0105245_131235841 | 3300009098 | Miscanthus Rhizosphere | MNLFKAFFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHP |
Ga0111538_132752451 | 3300009156 | Populus Rhizosphere | MNFLKAFLIGLVLVSFAGLIALAQSPAVKSPASSK |
Ga0105249_119306961 | 3300009553 | Switchgrass Rhizosphere | MNFLKASFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTT |
Ga0126374_111882072 | 3300009792 | Tropical Forest Soil | MNFFKTSFIGLALASFAGLIALAQTPAAKSVASSK |
Ga0105069_10509791 | 3300009800 | Groundwater Sand | MNFLRIWFVGLALASFAGLIALAQTPAAKSAASSKGISVLHPTAGNK |
Ga0126380_115273272 | 3300010043 | Tropical Forest Soil | MNLFKAFFIGVVLATFAGLIALAQTPAAKSAVSSKGISVLHPTAGNKVSGTVTFTPV |
Ga0126310_109157132 | 3300010044 | Serpentine Soil | MNSLKASIIGLVLASFAGFIALAQTPAAKSAASLNGISVLHPSAGNKVKGTVTFTPVT |
Ga0126384_123650641 | 3300010046 | Tropical Forest Soil | MNSFRAWFIGLALASFLGFVALAQTPAAKSAASSKGISVLHPTAGNKVTGTVP |
Ga0126373_104107521 | 3300010048 | Tropical Forest Soil | MNSLRTWSIGLALILFAGLIALAQTPAAKSSKAVSLLHPTAGNKVSGTVTF |
Ga0099796_100033714 | 3300010159 | Vadose Zone Soil | MNSFRVWFIGLALVSFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPGADG |
Ga0134064_104424752 | 3300010325 | Grasslands Soil | MLIMKAFRASFVGLTCLSFASLVALAQTPATKSTASSKAIAVLHPTA |
Ga0134080_102965352 | 3300010333 | Grasslands Soil | MNSSRAWFIGLVFASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPVAD |
Ga0126378_120384821 | 3300010361 | Tropical Forest Soil | MRNTDADMNAFRASFVGLLFLSFAGLIALAQTPSAKSATSSKAIAVLHPTAGNKVAGT |
Ga0126377_121792973 | 3300010362 | Tropical Forest Soil | MNSFRVWFIGLVLASFAGFVALAQTPAASLKGISVLHPTAGNKVSGTVTF |
Ga0126379_108651653 | 3300010366 | Tropical Forest Soil | MNFLKAFFIGTALASFAGFIALAQTPAAKSAVSSRGISVLH |
Ga0126379_131743681 | 3300010366 | Tropical Forest Soil | MNLLKAFLIGLVLASVGGLSALAQTPATISAASSKGISVLHPTAGNKVTGTVTFT |
Ga0105239_101827114 | 3300010375 | Corn Rhizosphere | MNLFKAFFIGLVLASFAGLFALAQTPAAKSAAPSKAISVLHPTAGNKVSGTVTFT |
Ga0134121_101491163 | 3300010401 | Terrestrial Soil | MRNTNADMNFLKTSFIGLVLALFAGLIALAQTPAAKSATSSKGISVLH |
Ga0137393_113234351 | 3300011271 | Vadose Zone Soil | MNFLRASIIELMLLTFAGLIAPAQTPAEKSAAPSKAIAVLHPTAGNK |
Ga0137389_109940802 | 3300012096 | Vadose Zone Soil | MNSLRAWFIGLALASFAGFIALAQTPAAKPAASSKGISVLHPTAGNKVSGTVTFTPVTDGVQVHA |
Ga0137364_105853131 | 3300012198 | Vadose Zone Soil | MNAFRISSIGLTFLLSAGLIALAQTPAAKSAAPSKGISVLHPTAGNKVSGT |
Ga0137364_114279702 | 3300012198 | Vadose Zone Soil | MNSFRALFIGLVVASLARLVALAQTPAAKSAASSKGISVLHPTAGNKVSGT |
Ga0137383_103863571 | 3300012199 | Vadose Zone Soil | MNSFRVWFIGLVLASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPV |
Ga0137363_102105374 | 3300012202 | Vadose Zone Soil | MNTFRASLIGLIFLSFAGLIALAQTPTAKSSTSSKAIAVLHSTAGNKV |
Ga0137399_106603853 | 3300012203 | Vadose Zone Soil | MNFLKASFIGLALASFAGLIALAQTPAAKSATSSKGISVLHPTAG |
Ga0137380_102231501 | 3300012206 | Vadose Zone Soil | MLIMKAFRASFVGLTCLSFASLVALAQTPATKSTASSKAVAVLHPSAGNKVNG |
Ga0137378_117253411 | 3300012210 | Vadose Zone Soil | MNSRRAWFIGLVLASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKV |
Ga0137377_102059163 | 3300012211 | Vadose Zone Soil | MNSLRAWFIGLALASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTP |
Ga0137386_108026192 | 3300012351 | Vadose Zone Soil | MNSSRAWFIGLVFASFAGLIALAQTPAAKSAASSKGISVLH |
Ga0137360_114131022 | 3300012361 | Vadose Zone Soil | MNSLKVSFIGLALASFAGLIALAQTPAAKSATSSKGISVLHPTAGNKVSGTVTFTPVA |
Ga0157304_10759131 | 3300012882 | Soil | MRNTNADMNFLKASFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFT |
Ga0157283_101829941 | 3300012907 | Soil | MRNTNADMNFLKASFIGLVLASFAGLIALAQTPAAKSAASSK |
Ga0137394_101759314 | 3300012922 | Vadose Zone Soil | MNFLKASFIGLALASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPVT |
Ga0137359_112453471 | 3300012923 | Vadose Zone Soil | MNSLRAWFIGLAFASFAGLLALAQTPAAKSKGISVLHPTAGNKASGTVT |
Ga0137413_100924701 | 3300012924 | Vadose Zone Soil | MNSLRAWFIGLALASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTV |
Ga0164300_102786701 | 3300012951 | Soil | MNFLKASFIGLVLASFAGLFALAQTPAAKSAAPSKGISVLHPTAGNKVIGTVTFTPGAD |
Ga0164298_109156031 | 3300012955 | Soil | MNFLKASFIGLVLASFAGLFALAQTPAAKSAAPSKGISVLHPTAGNKVIGTVTF |
Ga0164309_111832741 | 3300012984 | Soil | MNFFKASFIGLVLAFFAGLFALAQTPAAKSAASSK |
Ga0164307_108202181 | 3300012987 | Soil | MNFLKASFIGLVLASFAGLIALAQTPATKSAASSKGISVLHPTAGNKVSGTVTFTP |
Ga0163162_102310514 | 3300013306 | Switchgrass Rhizosphere | MNLFKAFFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVS |
Ga0163162_112161503 | 3300013306 | Switchgrass Rhizosphere | MNSFRAWFIGLVLASFAGLFALAQTPAAKSASSSKGIS |
Ga0157375_100149407 | 3300013308 | Miscanthus Rhizosphere | MNSFRAWVIGLVLASFAALIALAQTPAAKSAALSKAISVLHPTAGNKVS |
Ga0134079_100737483 | 3300014166 | Grasslands Soil | MNFLKASFIGLVLASLAGLIALAQTPAAKSEASSKAIAVLH |
Ga0157379_124052602 | 3300014968 | Switchgrass Rhizosphere | MNLLKAFFIGLALASFAGLIALAQTSATSAAASSKGISVLHPTAGNK |
Ga0132258_113832873 | 3300015371 | Arabidopsis Rhizosphere | MRLRNTDTDMNSVRFWFIGLVLASFAGFIALAQTPAAKSAA |
Ga0132258_129883391 | 3300015371 | Arabidopsis Rhizosphere | MNSFRAWLIGLVLASFAGLLALAQTPAAKSASSSKGISVLHPTAGNKVSGTVTFTPGADG |
Ga0132256_1008468433 | 3300015372 | Arabidopsis Rhizosphere | MNFLRASIIELMLLTFAGLMALAQTPAEKSAAPSKAIAVLH |
Ga0132257_1006721421 | 3300015373 | Arabidopsis Rhizosphere | MNSFRAWFIALVLASFAGFFALAQTPAAKSAVSSKG |
Ga0132257_1008335551 | 3300015373 | Arabidopsis Rhizosphere | MNLFKAFFIGLVLASFAGLFALAQTPAAKSAASSKGIS |
Ga0132257_1018726312 | 3300015373 | Arabidopsis Rhizosphere | MNLFKAFFIGLVLASFAGLFALAQTPAAKSVASSKGISVLHPTAGNKVSGTV |
Ga0132255_1057716241 | 3300015374 | Arabidopsis Rhizosphere | MNFLKSSFIGLVLASFAGLFALAQTPAAKSASSSKGISVLHPTAGNKVSGTVTFTPGADG |
Ga0182036_106553291 | 3300016270 | Soil | MNFLKAFFIGLVLASFAGLIALAQTPAAKSVASLKGISVLHP |
Ga0182034_114419191 | 3300016371 | Soil | MNFLKAFFIGLVLASFAGLIALAQTPAAKSVASLKGISVLHPTAGNK |
Ga0134074_13070461 | 3300017657 | Grasslands Soil | MNSLRGWFIGLVLASFAGLIALAQTPATKSAVSSK |
Ga0184626_100806101 | 3300018053 | Groundwater Sediment | MNFSRAWFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGT |
Ga0184619_100875703 | 3300018061 | Groundwater Sediment | MNSFRVWFIGLVLASFAGLIALAQTPATKSAASSKGISVLHPTAG |
Ga0173482_104019261 | 3300019361 | Soil | MRNTNADMNFLKASFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGT |
Ga0173479_106828552 | 3300019362 | Soil | MNFFKASFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVNGTVTFSPGADGVQVHAEL |
Ga0193705_10956262 | 3300019869 | Soil | MNSFRVWFIGLVLASFAGLIALAQTPATKSAASSKGISVLHPTA |
Ga0193727_10158311 | 3300019886 | Soil | MNSVKASFIGLVLASFAGLFALAQTPAAKSAASSKGIS |
Ga0193749_10460911 | 3300020010 | Soil | MNSFRAWFIGLVLASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTP |
Ga0193724_11069982 | 3300020062 | Soil | MNFLKASFIGLVLASFAGFIALAQTPAAKSAAPSKGISVLHPTAGNKVSGTVTFTPVGD |
Ga0210381_104102341 | 3300021078 | Groundwater Sediment | MRNTNADMNFLKASFIGLVFASFAALIALAQTPATKSAASS |
Ga0193719_100614361 | 3300021344 | Soil | MRNINADMNFLKASFIGLVLASFAGFIALAQTPATKSAASSKGISVLHPTAG |
Ga0224452_11641102 | 3300022534 | Groundwater Sediment | MNSFRVWFIGLVLASFAGLIALAQTPATKSAASSKGISVLHPTAGNKVSGTVTFTPVADGVQ |
Ga0247751_10446272 | 3300023069 | Soil | MNLFKAFFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPGADGVQ |
Ga0207673_10087432 | 3300025290 | Corn, Switchgrass And Miscanthus Rhizosphere | MNFLKASFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTTGNKVTGTVTFTPGADGVQVHAE |
Ga0207697_103339303 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MNTFRAWLIGLVLASLAGLIALAQTPATKSAAPSKAISVLHPTAGNKV |
Ga0207692_111018422 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MNFLKASFIGLVIASFAGLIALAQTPATKSAALSKGISVLHPTAGNKVSGTVTFTPGADG |
Ga0207688_104120093 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MNFFKASFIGLVLAFFAGLFALAQTPAAKSAASSKGISVLHPT |
Ga0207693_108879342 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MNFLKASFIGLVLALFAGLIALAQTPAAKSAAPSKGI |
Ga0207660_108987381 | 3300025917 | Corn Rhizosphere | MNSFRAWFIGLVLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFSPGA |
Ga0209814_103862071 | 3300027873 | Populus Rhizosphere | MNFLKAFLIGLVLVSFAGLIALAQSPAVKSAASSKGISVLH |
Ga0307291_11992201 | 3300028707 | Soil | MNFLKASFIGLVLASFAGLFALAQTPAAKSASSSKGISVLHPTAGNKVSG |
Ga0307287_102948082 | 3300028796 | Soil | MNSSRAWFIGLVLASFAGLLALAQTPAAKSAASLKGISVLHPT |
Ga0307312_110864592 | 3300028828 | Soil | MNSSRAWFIGLVLASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVT |
Ga0307277_101233091 | 3300028881 | Soil | MNSFRAWFIGLVLASFAGLIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPVTDGVQV |
Ga0075405_120655582 | 3300030847 | Soil | MNFFKASFIGLVLASFAGLIALAQTPAASSKGISVLHPT |
Ga0308189_105020051 | 3300031058 | Soil | MNSFRASFIGLVLASFAGFIALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTPVTDGVQVHA |
Ga0170820_155454701 | 3300031446 | Forest Soil | MDSFRAWFIGLVLASFAGLFALAQTPAAKSASSSKGISVLHP |
Ga0170819_146440111 | 3300031469 | Forest Soil | MNFFKASFIGLALASFAGLIALAQTPAAKSAASSK |
Ga0310888_103925143 | 3300031538 | Soil | MNSFRVWLIGLMLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNKVSGTVTFTP |
Ga0318528_107833101 | 3300031561 | Soil | MNFLKAFLIGLVLASFAGLIALAQTPAAKSAAPSKGISVLHPTAGNKV |
Ga0310813_115623481 | 3300031716 | Soil | MNFLKAFFIGTALASFAGLIALAQTPAVKSAASSKGISVLHPSAG |
Ga0310813_121608072 | 3300031716 | Soil | MNLLKAFFIGLMVASFAGLIALAQTPAAKSAVPSKG |
Ga0307469_110846321 | 3300031720 | Hardwood Forest Soil | MNFLKTSFIGLVLALFAGLIALAQTPAAKSATSSKGISVLHPTAGNKVSGTV |
Ga0307469_123447691 | 3300031720 | Hardwood Forest Soil | VLASFAGFIALAQTPAAKSATSSKGISVLHPTAGTKGSGPGTVTPVADGVQVLA |
Ga0306921_103809671 | 3300031912 | Soil | MNFLKAFFIGLVLASFAGLIALAQTPAAKSVASLKGISVLHPTAGNKVTGTVTFT |
Ga0310891_103975882 | 3300031913 | Soil | MNSFRVWLIGLMLASFAGLFALAQTPAAKSAASSKGISVLHPTAGNK |
Ga0310913_108506921 | 3300031945 | Soil | MNPIRAFFIGLTFLSSAGLIAVAQIPVAKSSAASKGISVLHPTTGNKVTGIVTFTPVADGVQVHAEI |
Ga0306922_113362301 | 3300032001 | Soil | MNFLKAFLIGLVLASFAGLIALAQTPAAKSAAPSKGISVLHPTAGNKVSGTV |
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