Metagenome / Metatranscriptome Family F073152

Basic Information
Family ID	F073152
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	87 residues
Representative Sequence	DSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILDL
Number of Associated Samples	64
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.03% β-sheet: 27.93% Coil/Unstructured: 45.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01182	Glucosamine_iso	94.17
PF01370	Epimerase	2.50
PF02683	DsbD	0.83
PF00196	GerE	0.83
PF01738	DLH	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	94.17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.00%
Host-Associated	Host-Associated	10.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.00%
Plants	Host-Associated → Plants	10.00%
Aquatic	Environmental → Aquatic	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.50%
Freshwater	Environmental → Aquatic → Freshwater	5.00%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Roots	Host-Associated → Plants → Roots	0.83%
Phylloplane	Host-Associated → Plants → Phylloplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.67%
Sand	Environmental → Terrestrial → Soil → Sand	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.50%
Ice	Environmental → Aquatic → Freshwater → Ice	4.17%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	3.33%
Loam	Environmental → Terrestrial → Soil → Loam	2.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.00%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.50%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.17%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.33%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	3.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	40.00%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.50%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.17%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018757	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034137	Biocrust microbial communities from Mojave Desert, California, United States - 39SMC	Environmental	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LCrCPGB2aDRAFT_0022811	3300000095	Soil	DGPAGNVSVELSPDSPDARLRRVRLRSADHSFQVSRHRERREVKTTVMRREDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL*
JGI12272J11983_11082511	3300000750	Soil	PDARLRRVRLRSADHSFQVSRHRERREVKTTVMRREDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL*
JGI1027J12803_1080164621	3300000955	Soil	QVRLYSDDYGFEVARSRDLSEARTVVTRGSEVLGERTVHLGHFDLGVLLGEELSFRGRDGIYENALRAAVEILEP*
C688J35102_1192512542	3300002568	Soil	ALDWRPESAVRTGEGREFVFSGPSGEVTIVLSSGSPDARLRRVRLYSEGYSFQVSRHQELSNIRSTVMRGDELCAERTVQFGSFDPGVLVGEELHYRGRDRFYEAALRTAVEMLDQ*
C688J35102_1209785941	3300002568	Soil	VDFSGPSGEVSVELSPDSPDARLRRIRLYSQDYSFQVSRHRALSDVRTTVMRGDDLLAERTVHIGSFDLGVLVGEELGYRGHDEAYEAALRTAVQVLDL*
JGI25407J50210_100893452	3300003373	Tabebuia Heterophylla Rhizosphere	STLGWRPESRNGGGQNIEFSGPSGRXVVVLSPDSPDARLRRIRLYSEEYSFQVSRHRELSHARTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYERSLLKAVEILDL*
Ga0063356_1035630002	3300004463	Arabidopsis Thaliana Rhizosphere	SVNLSPDSPDARLRRIRLYSEEYSFQVSRHRALSDVRTTVMRGDDLLAERTVHIGSFDLGVLVGEELGYRGHDEAYEAALRTAVKMLDL*
Ga0070684_1009325591	3300005535	Corn Rhizosphere	PDARLRRIRLYSGEYSFQVSRHRAHSDVRTTVMRGEDLVAERTVHIGSFDLGVLVGEELGYRGHDEAYGAALRTAVELIDL*
Ga0058697_106183982	3300005562	Agave	VSVALSPDSPDARLRRIRLYSSEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDIGVLVGEELHYRGRDEAYEGALRAAVKILDL*
Ga0079218_115525302	3300007004	Agricultural Soil	PESRNVGGQNIEFSGPSGRIVVVLCADSPDARLRRIRLHSGEYSFQVSCHRELSEARTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYERSLRGAVEILDL*
Ga0079218_121190301	3300007004	Agricultural Soil	EGQNIRFSGLSGDITVHLSPDSPDARLRRIRLYSEDYSFQVSRHRALSEVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYHGHDEAYEAALRTAVEVLDL*
Ga0105679_102037271	3300007790	Soil	RRVRLRSADHSFQVSRHRERREVKTTVMRGDDLVAERTVHLGRFDLGVLVGEELQFRGCDEIYEAALRAAVEVLDL*
Ga0126307_102571783	3300009789	Serpentine Soil	ASTLGWEPESRNGGQNIEFSGPSGRIIVDLSPDSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDQLLAERTVHLGSFDLGVLVGEELRYRGRDEAYERALRKAVEILDL*
Ga0126307_107587751	3300009789	Serpentine Soil	SRNGGGQNIEFSGPSGRISVVLSPDSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKVVEILDL*
Ga0126307_107969841	3300009789	Serpentine Soil	NIEFSGPSGRISVVLSPDSSDARLRRIRLYCPEYSFQVSRHRELSDVRTTVMREDELVAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126307_109545671	3300009789	Serpentine Soil	VSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVREELRYRGRDKAYEGALRAAVEILDL*
Ga0126307_110718781	3300009789	Serpentine Soil	KDLSREGDRRRVRFDGPSGEVVADLSPDSPDARLRRVRLRSADHSFQVSRHRERREVKTTVMRGEDLVAERTVHLGRFDLGVLVGEELQFRGCDEIYEAALRAAVEIIDL*
Ga0126307_116946732	3300009789	Serpentine Soil	FGVARSRDLSEARTTVTKGGELLAERTVHLGQFDLGVLLGEELQYRGRDEVYEAALRTAVGMLDP*
Ga0126313_105561101	3300009840	Serpentine Soil	QNIEFSGPSGRIIVILSPDSPDARLRRIRLYSPEHSFQVSRHRELSDVRTTVIRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRATVEILDL*
Ga0126313_107501591	3300009840	Serpentine Soil	ARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRTAVEILDL*
Ga0126305_100011061	3300010036	Serpentine Soil	SGDISVVLSPDSPDARLRRIRLYSEEHSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDIGVLVGEELHYRGRDEAYEGALRAAVKILDL*
Ga0126305_100739383	3300010036	Serpentine Soil	FRRVRLFSEDYGFEVTRSRDLSEARTAVTRDDEPLAERTVHLGTFDLGVLLGEELRYRGRDELYEGALRAAAEILER*
Ga0126305_108926432	3300010036	Serpentine Soil	PDSPDARLRRIRLYSGEYSFQVSRHRAHSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGRDEAYGAALSTAVAVLDL*
Ga0126305_109511852	3300010036	Serpentine Soil	RRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILDL*
Ga0126304_109549331	3300010037	Serpentine Soil	LASTLGWRPESRNGGGQNIEFSGPSGQISVVLSPDSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRSCDEAYEGSLRKAVEILDL*
Ga0126304_112818391	3300010037	Serpentine Soil	GQNIEFSGPSGRISVVLSPDSSDARLRRIRLYCPEYSFQVSRHRELSDVRTTVMREDELVAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126315_100617123	3300010038	Serpentine Soil	ASTLGWKPEGASHNGGGRNVTFAGPSGEVSVALSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGVLVGEELRYRGRDEAYESALHAAVEILEL*
Ga0126315_104154772	3300010038	Serpentine Soil	SGQISVMLSPDSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDETYEGSLRKAVEILDL*
Ga0126315_105656021	3300010038	Serpentine Soil	SANRGGQNIEFSGPSGRIIVDLSPDSPDARLRRIRLYSEEYSFQVSRHREFSDVRTTVMRGDELLAERTVHLGSFELGVLVGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126309_100452011	3300010039	Serpentine Soil	RRIRLYSEEYSFQVSRHRAFSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALRTAVEVLDL*
Ga0126309_101079801	3300010039	Serpentine Soil	PDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGVLVGEELRYRGRDEAYESALHAAVEILEL*
Ga0126309_101224003	3300010039	Serpentine Soil	LSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGVLVGEELRYRGRDEAYESALRAAVEILAL*
Ga0126309_102777072	3300010039	Serpentine Soil	LFSEDYGFEVARSRDLSEARTAVTRGGETLAERTVHLGTFDLGVLLGEELRYRGRDEIYEGALRTAVEVLVP*
Ga0126309_106163861	3300010039	Serpentine Soil	GRRIEFSGPSGNISVDLSPDSPDARLRRIRLYSQEYSFQVSRHRELSDVRTTVMRGDELIAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRAALEILDL*
Ga0126309_106757002	3300010039	Serpentine Soil	ALSPDSPDARLRRIRLYSSEYSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGILVGEELRYRGRDEAYESALRAAVEILEL*
Ga0126309_107033061	3300010039	Serpentine Soil	DARFREVRLYSGDYGFGVARSRDLSEAHTTVMRDDELLAERTVHLGHFDLGVLLGEVLRYRGRDELYEAALRLAVEMLDL*
Ga0126309_109549762	3300010039	Serpentine Soil	YSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRTAVEILDL*
Ga0126308_101241281	3300010040	Serpentine Soil	EGASRNGDGQSIEFSGPSGRIFVDLSPDSPDARLRRIRLYSSEHSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDKAYEGALRAAVEILDL*
Ga0126308_101571893	3300010040	Serpentine Soil	IIVVLSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILVL*
Ga0126308_101858023	3300010040	Serpentine Soil	RRIRLYSEEYSFQVSRHRELSDVRTTVMREDELLAERTVHLGSFDLGVLFGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126308_110795282	3300010040	Serpentine Soil	SPDARLRRIRLYSEEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALDTVVEMLDL*
Ga0126308_112818991	3300010040	Serpentine Soil	NASRDGGGRRIEFSGPSGEISVDLSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGEDLLAERTVHLGSFDLGVLVGEELRYRGHDEAYEAALRTAVDVLDL*
Ga0126312_101624703	3300010041	Serpentine Soil	EYSFQVSRHRELSDVRTTVMRGNELLAERTVHLGSFDIGVLVGEELRYRGHDEAYKDALRAAVEILDL*
Ga0126312_106434441	3300010041	Serpentine Soil	IRLYSPEYSFQVSRHRALSDVRTTVMREDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126312_109557172	3300010041	Serpentine Soil	EMSPTSPDARFRQVRLYSDDYGFEVARSRDLSEARTTVAKGSEKLAERTVHLGTFDLGVLLGEELQYRGRDRRYEAALRAAVAVLDL*
Ga0126312_111787922	3300010041	Serpentine Soil	SPDARLRRIRLYSAGYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRSCDEAYEGSLRKAVEILDL*
Ga0126314_106339691	3300010042	Serpentine Soil	EHSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLRVLVGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126314_109351551	3300010042	Serpentine Soil	RHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAFEGSLRKAVEILDL*
Ga0126314_110050621	3300010042	Serpentine Soil	FSGPSGGITVELSPDSPDARLRRIRLYSGEYSFQVSRHRAHSDVRTTVMRGEDLVAERTVHIGSFNLGVLVGEELGYRGHDEAYGAALRTAVELIDL*
Ga0126310_104486921	3300010044	Serpentine Soil	ESRNGGGQNIEFSGPSGRITVVLSPDSPDARLRRIRLYSAGYSFQVSRHRDLSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDC*
Ga0126310_107113081	3300010044	Serpentine Soil	RLRRIRLYSSEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILDL*
Ga0126310_112933302	3300010044	Serpentine Soil	ENTTRNGGDQTIEFSGPSGGITVELSPDSPDARLRRIRLYSGEYSFQVSRHRAHSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGRDEAYGAALSTAVAVLDL*
Ga0126311_100148951	3300010045	Serpentine Soil	ARSSDLSEACTTVEKDDELVAGRTVHLGFFDLGVLLGEELRYRGRDEVYQTAVRAAVEMLDL*
Ga0126311_102082851	3300010045	Serpentine Soil	ELSPDSPDARLRRIRLYSGEYSFQVSRHRAHSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGRDEAYGAALSTAVAVLDL*
Ga0126311_102553003	3300010045	Serpentine Soil	YSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL*
Ga0126311_102645253	3300010045	Serpentine Soil	GITVELSPDSPDARLRRIRLYSEEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALRTAVEVIDL*
Ga0126311_103127372	3300010045	Serpentine Soil	GGGQNIEFSGPSGRISVVLSPDSPDTRLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELSYRGRDEAFEGSLRKAVEILDF*
Ga0126311_109888442	3300010045	Serpentine Soil	GEGRTIEFSGPSGDISVALSPDSPDSRLRRIRLYSGEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHLGSFDLGVLVGEELGYRGRDEAYEGALRTAVEMLDL*
Ga0126321_10643981	3300010145	Soil	VEFSGPSGGISVELSPDSPDARLRRIRIYSEEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYRAALSTAVEVLDL*
Ga0126306_104734522	3300010166	Serpentine Soil	DSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILVL*
Ga0126306_112888312	3300010166	Serpentine Soil	EVARSRDLSEARTVVTRDGEVLAERTVHLGHFDLGVLLGEELSFRGRDGIYENALRAAVEILEP*
Ga0136632_103135882	3300012093	Polar Desert Sand	EYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGAFDLGVLVGEELHYRGRDETYEGSLRAAVEILDL*
Ga0136620_101064781	3300012186	Polar Desert Sand	VLSPDSPDARLRRIRLYSSEYSFQVSRHRELSDVRTTVMRGDEMLAERTVHLGSFDLGVLVGEELRFRGRDEAYEGALRAAMEILDL*
Ga0136613_101773953	3300012681	Polar Desert Sand	SEEYSYQVSRHRELSDVSSTVMRGGELLAGRTVQLGSFDPGVLVGEELRYRGRDEVYEAALRMAAEMLDL*
Ga0182000_103075521	3300014487	Soil	DSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILDL*
Ga0182000_104273802	3300014487	Soil	GPSGGVSVALSPDSPDARLRRIRLYSEEHSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGVLVGEELRYRGRDEAYESALRAAVEILEL*
Ga0182001_101638362	3300014488	Soil	MYSEDYGFGVARSRDLSEARTTVTKDGELLAERTVHLGHFDLGVLLGEELQYRGRDEVYEAALRAAVGMLDL*
Ga0136617_103197061	3300017789	Polar Desert Sand	SGPSGDISVVLSPDSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGTFDLGVLVGEELHYRGRDETYEGSLRAAVEILDL
Ga0136617_113158872	3300017789	Polar Desert Sand	SGPSGDISVVLSPDSPDARLRRIRLYSPEYSFQVSRHRELSHVRTTVMRGDELLAERTVHLGSFDLGVLVGEELHYRGRDEAYEGSLREAVEILDL
Ga0190266_109561671	3300017965	Soil	RLYSEEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALRAAVEVIDL
Ga0190275_100716034	3300018432	Soil	VHLSPDSPDARLRRIRLYSEDYSFQVSRHRALSEVRTTVMRGDDLLAERTVHIGSFDLGALVGEEMGYRGHDEAYEAALRTAVEVLDL
Ga0190268_101414373	3300018466	Soil	SGEVSVALSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGVLVGEELRYRGRDEAYESALRAAVEILEL
Ga0190268_105653362	3300018466	Soil	YAEEYSFQVSRHRALSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDKAYEGALRVAVEILDL
Ga0190268_120403411	3300018466	Soil	QVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILDL
Ga0190270_126837632	3300018469	Soil	SGRIIVDLSPDSPDARVRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRKAVEILDL
Ga0193612_10194422	3300018757	Soil	GSSGEISVELSAGSPDARLRRIRLYSEELSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELGYRGRDEAYERALAAAVEALSL
Ga0193612_10288232	3300018757	Soil	EEHSFQVSRHRDLSDVRSTVMRGDELLAERTIHLGSFDPAVLVGEELRYRGRDGVYEAALRMAVEMIEL
Ga0193612_10848612	3300018757	Soil	DHSYQVSRHREHREVKTTVMRGEELVAERTVHLGSFDLGVLVGEELQFRGCDEAYEAALRAVVGILNL
Ga0193608_10163761	3300018875	Soil	SYQVSRHREHREVKTTVMRGEELVAERTVHLGSFDLGVLVGEELQFRGCDEAYEAALRAVVGILDL
Ga0193608_10305683	3300018875	Soil	RLRSADHSFQVSRHREHREVKTTVMRGGDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0193608_11044791	3300018875	Soil	SALRWRPESADRAEEGREFTFSGPTGEITVALAPGSPDVRLRRVRLYSEEHSFQVSRHRDLSDVRSTVMRGDELLAERTIHLGSFDPAVLVGEELRYRSFKDNRLLLAR
Ga0193610_10647292	3300018891	Soil	VELSAGSPDARLRRIRLYSEELSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELGYRGRDEAYERALAAAVEALSL
Ga0193598_11614832	3300018910	Soil	DYGFEVARSRDLSEAHTAVTRGGETLAERTVHLGTFDLGVLLGEELRYRGRDEIYEGALRTAVEVLVP
Ga0193616_10258911	3300018918	Soil	RRVRLRSADHSFQVSRHRERREVKTTVMRREELVAERTVHLGRFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0190273_103496432	3300018920	Soil	LRRIRLYSPEHSFQVSRHRELSDVRTTVMRGDELLAERTVHLGAFDLGVLVGEELHYRGRDETYEGSLRAAVEILDL
Ga0190273_112604361	3300018920	Soil	DSPDARLRRIRLYSEEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYEAALRTAVEVLDL
Ga0193614_10857061	3300018933	Soil	GPSGSVSVGLSPDSPDARLRRVRLRSPDHSFQVSRHREHREVRTTVMRGEELVAERTVHLGSFDLGVLVGEELQYRGRDETYEAALRVAVEILDL
Ga0193593_10264881	3300018939	Soil	ARLRRVRLRSADHSFQVSRHREHREVKTTVMRGENLVAERTVHLGRFDLGVLVGEELQFRGCDETYEAALRTAVEILDL
Ga0193593_10681022	3300018939	Soil	PQGVTRDGDQREVGFAGPSGSVSVRLSPDSPDARLRRVRLRSPDHSFQVSRHREHREVRTTVMRGEELVAERTVHLGSFDLGVLVGEELQYRGRDETYEAALRVAVEILDL
Ga0193599_10922401	3300018946	Soil	GEITVALTPGSPDVRLRRVRLYSEEHSFQVSRHRDLSDVRSTVMRGDELLAERTIHLGSFDPAVLVGEELRYRGRDGVYEAALRMAVEMIEL
Ga0193605_10128731	3300018984	Soil	HSFQVSRHREHREVKTTVMRGEDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0193605_10453791	3300018984	Soil	GNVSVELSPDSPDARLRRVRLRSADHSFQVSRHRERREVKTTVMRREDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0193597_10149127	3300019142	Soil	PDSPDARLRRVRLRSADHSFQVSRHREHREVKTTVMRGEDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0193597_10321491	3300019142	Soil	RFDGPAGNVSVELSPDSPDARLRRVRLRSADHSFQVSRHRERREVKTTVMRREDLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0190264_120693441	3300019377	Soil	HRTVRFDGPAGDVSMELSPGSPDARLRRVRLRSADHSFQVSRHREHREVKTTVMRGENLVAERTVHLGHFDLGVLVGEELQFRGCDETYEAALRAAVEILDL
Ga0190267_103090682	3300019767	Soil	LASTLGWKPESADRQNIEFSGPSGRIIVILSPDSPDARLRRIRLYSPEHSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL
Ga0190267_104848231	3300019767	Soil	PEGVSRNGEGSTIEFAGPSGDISVELSSDSPDARLRRIRLYSGEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHLGSFDLGVLVGEELGYRGHDEAYEAALRTAVEVLDL
Ga0190267_111419702	3300019767	Soil	YSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALRTAVEVLDL
Ga0272482_103247832	3300028578	Soil	RNGDGQNIEFSGPSGRIFVDLSPDSPDARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGILVGEELRYRGRDEAYEGALRKAVEILEL
Ga0307297_101152502	3300028754	Soil	QVSRHRELSDVRTTVMRGEDLIAERTVHIGSFDLGVLVGEELGYRGRDEAYEAALRTAVEVLDL
Ga0307320_103233981	3300028771	Soil	NGDGQSIEFSGPSGRIFVDLSPDSPDARLRRIRLYSPEHSFQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGCDKAYEGALRAAVEILDL
Ga0307288_102748862	3300028778	Soil	PDSPDARLRRIRLYSEGYSFQVSRHRELSDVRTTVMRGEDLIAERTVHIGSFDLGVLVGEELGYRGRDEAYEAALRTAVEVLDL
Ga0272434_12906432	3300031473	Rock	ARLRRVRLRSPEHTFQISRHREHREVKTTVMRGEELVAERTVHLGSFDLGVLVGEELQFRGRDETYEAALRTAVEILDL
Ga0307408_1003941302	3300031548	Rhizosphere	GRDGGARLIEFSGPSGSISVELSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGDDLLAERTVHLGSFDLGVLVGEELSYRGHDEAYENALRAAVEVLDL
Ga0307405_114319671	3300031731	Rhizosphere	GWKAERAGRDGGARLIEFSGPSGSISVELSPDSPDARLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGDDLLAERTVHLGSFDLGVLVGEELSYRGHDEAYENALRAAVEVLDL
Ga0307413_103995822	3300031824	Rhizosphere	RISVVLSSDSPDARLRRIRLYSAGYSFQVSRHRELSDVRTTVMREDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL
Ga0307416_1018002241	3300032002	Rhizosphere	ARSRDLSEACTTVTRNGELLAERTVHLGKFDLGVLLGEELQFRGRDGIFEAALRAAVEILDA
Ga0307414_108694172	3300032004	Rhizosphere	ARLRRIRLYSPEYSFQVSRHRELSDVRTTVMRGDDLLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGALRAAVEILDL
Ga0307414_115124072	3300032004	Rhizosphere	STTRNGGGRTIEFSGGITVELSPDSPDARLRRIRLYSEEYSFQVSRHRALSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALDTVVEMLDL
Ga0307411_110776292	3300032005	Rhizosphere	GIRLYSEEYSFQVSRHRELSDVRTTVMRGEDLLAERTVHLGSFDLGVLVGEELSYRGHDEAYENALRAAVEVLDL
Ga0307411_112436371	3300032005	Rhizosphere	RLYSEEYSFQVSRHREFSDVRTTVMRGDELLAERTVHLGSFELGVLVGEELRYRGRDEAYEGSLRKAVEILDL
Ga0307411_112789211	3300032005	Rhizosphere	VARSRDLSEARTVVTRDGEVLAERTVHLGHFDLGVLLGEELSYRGRDGIYERALRAAVEILEP
Ga0334915_020870_3_239	3300034132	Hypolithic Biocrust	RLRRIRLYSEEYSFQVSRHRELSDVRTTVMRGEELLAERTVHIGSFDLGVLIGEELGYRGRDEAYEAALRTAVEVLDL
Ga0334915_087356_327_626	3300034132	Hypolithic Biocrust	VEFSGPSGGITVELSPDSPDARLRRVRLYSEEYSFQVSRHRAVSDVRTTVMRGEDLLAERTVHIGSFDLGVLVGEEMGYRGHDEAYGAALRAAVEVLDL
Ga0334943_073669_210_542	3300034137	Biocrust	VDATRTEDGREVRFAGPSGEIVAELSPNSPDARLRRVRMYSDEYSFQVSRHRDLSDARTTVMRGDDLLGELTVHLGSFDLGDLLGEELRYRGRDAVYETALRTAAQILDL
Ga0334961_017975_988_1185	3300034143	Sub-Biocrust Soil	FEVARSRDLSEARTAVTRGGETLAERTVHLGTFDLGVLLGEELRYRGRDELYEGALRTAVEVLVP
Ga0334913_086956_1_198	3300034172	Sub-Biocrust Soil	FQVSRHRELSDVRTTVMRGDELLAERTVHLGSFDLGVLVGEELRYRGRDEAYEGSLRKAVEILDL
Ga0334925_121898_217_564	3300034173	Hypolithic Biocrust	LGWKPEGASHNGDGRSVTFAGPSGEVSVALSPDSPDARLRRIRLYSSEYSFQVSRHRELSDVRTTVMRGEELLAERTVHLGSFDLGVLVGEELRYRGRDEAYESALRAAVEILEL
Ga0334931_122318_35_259	3300034377	Sub-Biocrust Soil	VRLFSEDYGFEVARSRDLSEARTAVTRGGETLAERTVHLGTFDLGVLLGEELRYRGRDELYEGALRTAVEVLVP
Ga0334945_020894_798_1022	3300034779	Sub-Biocrust Soil	VRLYSDGYSFQVSRHRELSDARATIMRGDALCGERTVHLGQFDLGVLLGEELQYRGRDELYEAALRTAVEILDL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073152

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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