NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073365

Metagenome / Metatranscriptome Family F073365

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073365
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 42 residues
Representative Sequence CSRGVTLVELDGVAAADKIVTLRDDGLPHEVRVVLGTKPPA
Number of Associated Samples 105
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 93.33 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(19.167 % of family members)
Environment Ontology (ENVO) Unclassified
(30.833 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.500 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF05532CsbD 37.50
PF01904DUF72 4.17
PF03358FMN_red 4.17
PF02806Alpha-amylase_C 3.33
PF01975SurE 2.50
PF07043DUF1328 2.50
PF01168Ala_racemase_N 1.67
PF00583Acetyltransf_1 1.67
PF11838ERAP1_C 1.67
PF00196GerE 0.83
PF00534Glycos_transf_1 0.83
PF00175NAD_binding_1 0.83
PF14235DUF4337 0.83
PF02811PHP 0.83
PF03631Virul_fac_BrkB 0.83
PF11964SpoIIAA-like 0.83
PF13450NAD_binding_8 0.83
PF00069Pkinase 0.83
PF12838Fer4_7 0.83
PF00487FA_desaturase 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 37.50
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 4.17
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 3.33
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 3.33
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.33
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 3.33
COG0496Broad specificity polyphosphatase and 5'/3'-nucleotidase SurEReplication, recombination and repair [L] 2.50
COG5487Uncharacterized membrane protein YtjA, UPF0391 familyFunction unknown [S] 2.50
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.83
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.83
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.50 %
UnclassifiedrootN/A7.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000793|AF_2010_repII_A001DRAFT_10067802All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300000955|JGI1027J12803_108716954All Organisms → cellular organisms → Bacteria1541Open in IMG/M
3300001333|A21PFW6_1216448All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300004643|Ga0062591_100439962All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1095Open in IMG/M
3300005186|Ga0066676_10665991All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005186|Ga0066676_11097935All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia524Open in IMG/M
3300005289|Ga0065704_10618955All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005295|Ga0065707_10032982All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300005327|Ga0070658_10070662All Organisms → cellular organisms → Bacteria2858Open in IMG/M
3300005446|Ga0066686_10271728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia1148Open in IMG/M
3300005450|Ga0066682_10404834All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300005456|Ga0070678_102018108All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005544|Ga0070686_101519805All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005545|Ga0070695_100209313All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300005552|Ga0066701_10253316All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1089Open in IMG/M
3300005553|Ga0066695_10254480All Organisms → cellular organisms → Bacteria → Proteobacteria1108Open in IMG/M
3300005558|Ga0066698_10921937Not Available558Open in IMG/M
3300005559|Ga0066700_10823853All Organisms → cellular organisms → Bacteria → Proteobacteria623Open in IMG/M
3300005568|Ga0066703_10707983All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300005569|Ga0066705_10725854All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300005574|Ga0066694_10461635All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005586|Ga0066691_10576966All Organisms → cellular organisms → Bacteria → Proteobacteria669Open in IMG/M
3300005616|Ga0068852_102542981All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300006791|Ga0066653_10443854All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium662Open in IMG/M
3300006797|Ga0066659_10548075All Organisms → cellular organisms → Bacteria → Proteobacteria934Open in IMG/M
3300006797|Ga0066659_10960644All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300007255|Ga0099791_10523868All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300009012|Ga0066710_101244228Not Available1154Open in IMG/M
3300009100|Ga0075418_11776588All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia671Open in IMG/M
3300009101|Ga0105247_11804411Not Available509Open in IMG/M
3300009177|Ga0105248_10319691All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1748Open in IMG/M
3300010303|Ga0134082_10030767All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300010303|Ga0134082_10226391All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia770Open in IMG/M
3300010322|Ga0134084_10034246All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300010333|Ga0134080_10322179All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium698Open in IMG/M
3300010360|Ga0126372_13057038Not Available519Open in IMG/M
3300010364|Ga0134066_10422741All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010364|Ga0134066_10444714All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes505Open in IMG/M
3300010399|Ga0134127_13329352All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales526Open in IMG/M
3300012149|Ga0153941_1087674All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herminiimonas → Herminiimonas arsenicoxydans505Open in IMG/M
3300012180|Ga0153974_1058751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium848Open in IMG/M
3300012198|Ga0137364_10523635All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300012202|Ga0137363_11495453All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300012205|Ga0137362_10746522All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300012205|Ga0137362_11526649Not Available555Open in IMG/M
3300012205|Ga0137362_11722594Not Available514Open in IMG/M
3300012210|Ga0137378_10471155All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300012212|Ga0150985_119439896Not Available557Open in IMG/M
3300012351|Ga0137386_10070055All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus2446Open in IMG/M
3300012351|Ga0137386_10427044All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium954Open in IMG/M
3300012356|Ga0137371_10252675All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1376Open in IMG/M
3300012915|Ga0157302_10056743All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1125Open in IMG/M
3300012960|Ga0164301_11194493All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium611Open in IMG/M
3300012972|Ga0134077_10296882All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia678Open in IMG/M
3300012976|Ga0134076_10508620All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012977|Ga0134087_10757676Not Available521Open in IMG/M
3300013296|Ga0157374_11923925All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae617Open in IMG/M
3300013297|Ga0157378_10447361All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300013306|Ga0163162_11544461All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300013306|Ga0163162_11717552All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300014166|Ga0134079_10110570All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300015356|Ga0134073_10091378All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300015372|Ga0132256_102503713All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales618Open in IMG/M
3300016319|Ga0182033_10045501All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2931Open in IMG/M
3300016319|Ga0182033_10198178All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1595Open in IMG/M
3300016341|Ga0182035_11578003All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales592Open in IMG/M
3300016357|Ga0182032_10896803All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia753Open in IMG/M
3300016387|Ga0182040_10610095All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales884Open in IMG/M
3300018054|Ga0184621_10178716All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300018054|Ga0184621_10201642All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300018066|Ga0184617_1223484All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300018073|Ga0184624_10357779All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae653Open in IMG/M
3300018081|Ga0184625_10310125All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300018431|Ga0066655_10616057All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium732Open in IMG/M
3300018468|Ga0066662_10061952All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2453Open in IMG/M
3300018468|Ga0066662_12187403All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium580Open in IMG/M
3300019868|Ga0193720_1044821All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300019878|Ga0193715_1014453All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1704Open in IMG/M
3300019885|Ga0193747_1035668All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300019997|Ga0193711_1033731All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300019999|Ga0193718_1103698All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300020006|Ga0193735_1134729All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300020018|Ga0193721_1004254All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae3728Open in IMG/M
3300022756|Ga0222622_10012935All Organisms → cellular organisms → Bacteria4030Open in IMG/M
3300023058|Ga0193714_1007526All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300025898|Ga0207692_11116143All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300025903|Ga0207680_10239483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1250Open in IMG/M
3300025923|Ga0207681_10552740All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia948Open in IMG/M
3300025932|Ga0207690_10403494All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300025936|Ga0207670_10599437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus904Open in IMG/M
3300026067|Ga0207678_10821057All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300026305|Ga0209688_1095352All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium548Open in IMG/M
3300026324|Ga0209470_1022039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria3415Open in IMG/M
3300026325|Ga0209152_10114511All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300026360|Ga0257173_1065802All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300026537|Ga0209157_1223619All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia772Open in IMG/M
3300026537|Ga0209157_1381861All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300026547|Ga0209156_10422939All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300026550|Ga0209474_10747916All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300026557|Ga0179587_10637373All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales702Open in IMG/M
3300026867|Ga0207475_1015202Not Available515Open in IMG/M
3300028380|Ga0268265_10446552All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1207Open in IMG/M
3300028708|Ga0307295_10103276All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300028793|Ga0307299_10320013All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300028824|Ga0307310_10441810All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia650Open in IMG/M
3300028878|Ga0307278_10086963All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1407Open in IMG/M
3300030916|Ga0075386_12060206All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300031231|Ga0170824_100496877All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium668Open in IMG/M
3300031231|Ga0170824_128320909All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300031446|Ga0170820_10021388All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium654Open in IMG/M
3300031446|Ga0170820_15767548All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300031474|Ga0170818_104632585All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300031716|Ga0310813_10863214All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia818Open in IMG/M
3300031833|Ga0310917_10405567All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae927Open in IMG/M
3300031833|Ga0310917_11050225All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia545Open in IMG/M
3300031910|Ga0306923_11608176All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300032012|Ga0310902_10480274All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae807Open in IMG/M
3300032059|Ga0318533_10574120All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia827Open in IMG/M
3300032205|Ga0307472_102507671All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium524Open in IMG/M
3300032421|Ga0310812_10034032All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1885Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil19.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil9.17%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.33%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.67%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.67%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001333Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012149Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ025 MetaGHost-AssociatedOpen in IMG/M
3300012180Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaGHost-AssociatedOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023058Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026867Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A001DRAFT_1006780213300000793Forest SoilLVELDGVAAADKIVTLHDDALSHQVRVVLGTKSPA*
JGI1027J12803_10871695413300000955SoilNPEHCSRGVTLVELDGVAAADKIVMLRNDALPHDVRVVLGTKPPT*
A21PFW6_121644833300001333PermafrostPDHCSRGVTLVELDGVAAADKIVTLRDDALPHEVRVLLGTKQPA*
Ga0062591_10043996213300004643SoilRGVVVTELDGVSAANNIVNLRDDGVSHEVRVVLGNKPPA*
Ga0066676_1066599113300005186SoilPDHCSRGVTLVELDGIAVADKIVTLRDDTQPHEVRVVLGTKPSS*
Ga0066676_1109793513300005186SoilHCARGVTLVELDGAAAADKIVMLRNDALPHEVRVVLGPKPPT*
Ga0065704_1061895533300005289Switchgrass RhizosphereVENPDHCSRGVILMELDGVSAADKTVRLCDDGLPHEVRVVLGNKPV*
Ga0065707_1003298243300005295Switchgrass RhizosphereNPDHCSHGVILMELDGVSLADKTVKLCDDGLPHEVRAVLGNKPPV*
Ga0070658_1007066213300005327Corn RhizosphereDQCSRGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA*
Ga0066686_1027172813300005446SoilNPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRVVLGTKTPA*
Ga0066682_1040483413300005450SoilENPERCSRGVTLVELDGVVAADKIVRLRNDELPHEVRVVLGSKPPT*
Ga0070678_10201810823300005456Miscanthus RhizosphereDHCCRGVVVTELDGVSAANNIVNLRDDGVSHEVRVVLGNKPPA*
Ga0070686_10151980513300005544Switchgrass RhizosphereRGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA*
Ga0070695_10020931343300005545Corn, Switchgrass And Miscanthus RhizosphereENPDHCSRGVIVMELDGVTVAGKAVKLSDDGLPHEVRVVLGNKPPA*
Ga0066701_1025331613300005552SoilTLVELDGAAVADKIVMLRNDALPHEVRVVLGPKPPT*
Ga0066695_1025448013300005553SoilCSRGVVLVEVDGIAVPDKIVTLRDDALGHEVRVVLGTKTAA*
Ga0066698_1092193713300005558SoilLVELDGVVAADKIVTLRNDMLSHEVRVVLGTEPPA*
Ga0066700_1082385323300005559SoilFQNTIYHIAVENADHCSRGVTLVELDGVGVADKIMTLRDDALPHEVRVVLGTKPPA*
Ga0066703_1070798313300005568SoilCSRGVTLVELDGVAAADKIVTLRDDGLPHEVRVVLGTKPPA*
Ga0066705_1072585413300005569SoilVELDGVAVADKIVTLRDDTLPHEVRVVLGIKPPA*
Ga0066694_1046163513300005574SoilVENPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRVVLGTKTLA*
Ga0066691_1057696623300005586SoilCSRGVVLVEVDGIAVPDKIVTLRDDALRHEVRVVVGTKTSA*
Ga0068852_10254298113300005616Corn RhizosphereLCSRGVIVMELDGVTVAGKAVKLSDDGLPHEVRVVLGNKPPA*
Ga0066653_1044385433300006791SoilVLVEVDGIAVPDKIVTLRDDALGHEVRVVLGTKTPA*
Ga0066659_1054807533300006797SoilHCSRGVVLVEVDGIAVPDKIVTLRDDALRHEVRVVLGTKTSA*
Ga0066659_1096064433300006797SoilRGVILMELDRVSAADKTVRLCDDGLLHEVRVVLGNKPPVSG*
Ga0099791_1052386813300007255Vadose Zone SoilLMELDGVSAADKTVRLCDDGLPHEVRVVLGNKPM*
Ga0066710_10124422833300009012Grasslands SoilAVENPVPCSSGVTLVEVDGIMVHAKIVTLRDDGLRHEKRVVLGT
Ga0075418_1177658833300009100Populus RhizosphereVILVELDGVSVADKTVKLYDDGLPHEVRVVLGNKPST*
Ga0105247_1180441113300009101Switchgrass RhizosphereNPDQCSRGAAEPEIDEVSAANNIVNLCDDGVSHEVRVVLGNKPPG*
Ga0105248_1031969113300009177Switchgrass RhizosphereTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA*
Ga0134082_1003076713300010303Grasslands SoilDHCSRGVALVEVDGIAVSDKIVTLRDDARPHEVRVVLGTEPVA*
Ga0134082_1022639133300010303Grasslands SoilGVTLVEVDGIMVADKIVTLRDDGLRHEVRVVLGT*
Ga0134084_1003424613300010322Grasslands SoilEHCSRGVTLVELDGVAAADKIVTLRDDALPHEVRVVLGIEPSE*
Ga0134080_1032217913300010333Grasslands SoilIAVENPDHCSRGVTLVELDGIAVADKIVVLRDDALPHEVRVVLGTKPSA*
Ga0126372_1305703813300010360Tropical Forest SoilPDHCSRGVILVELDGVSVADKTVRLRDDGLSHEVRVVLGNKPPV*
Ga0134066_1042274113300010364Grasslands SoilYRIVVENPYHCSRGVTLGKLDGVAARDKIVRLRDDALPHDVRVVLGTKPPT*
Ga0134066_1044471423300010364Grasslands SoilILVELDGVSTAEKTVGLCDDGLSHEVRVVLGNKPPVSG*
Ga0134127_1332935223300010399Terrestrial SoilILVELDGVSVADKIVKLRDDGQAHEVRVVMGNKPST*
Ga0153941_108767413300012149Attine Ant Fungus GardensIAVENPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRVVLGTKTPA*
Ga0153974_105875123300012180Attine Ant Fungus GardensAVENPEHCSRGVTLVEVDGVAAADKIGILRNDALPHDVRVVLGAKPT*
Ga0137364_1052363523300012198Vadose Zone SoilLVELDGVAAADKIVTLRDDALPHEVRVVLGIEPSE*
Ga0137363_1149545313300012202Vadose Zone SoilENPRHCSCGVTLLEVDGITVAEKMVTLRDDALPHEVRVVMGRESPDD*
Ga0137362_1074652213300012205Vadose Zone SoilIYRIAVENPDHCSRGVTLVELDAGVAADKIVTLRDDALAHEVRVVLGTKPPA*
Ga0137362_1152664913300012205Vadose Zone SoilNTTYRIAVENPDHCSQGVILMELDGISAADKIVRLCDDGLPHKVRVVLGNKPPV*
Ga0137362_1172259413300012205Vadose Zone SoilENPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRAVLGTKTPA*
Ga0137378_1047115513300012210Vadose Zone SoilRSQGVALVELDGVAVADKIVTLRDDTLPHEVRVVLGIKPPA*
Ga0150985_11943989623300012212Avena Fatua RhizosphereGVVVTEVDGVSVANHIVKLCDDGVSHEVRVVLGNKPPA*
Ga0137386_1007005513300012351Vadose Zone SoilRGVTLVELDGAAAADKIVMLRNDALPHEVRVVLGPKPPT*
Ga0137386_1042704413300012351Vadose Zone SoilDHCSRGVTLVELDGIAVADKIVTLRDDALPHEVRVVLGTKPST*
Ga0137371_1025267513300012356Vadose Zone SoilPLPCSSGVTLVEVDGIMVADKIVTLRDDGLRHEVRVVLGT*
Ga0157302_1005674343300012915SoilVVVTELDEVSTANNTVKLCDDGMPHEVRVVLGNKPPA*
Ga0164301_1119449323300012960SoilVLMELDGVAVADKIVTLRDDALPHEVRVVLGTKPST*
Ga0134077_1029688213300012972Grasslands SoilVENPDHCSRGVALVEVDGIAVADKMVTLRDDARPHEVRVVLGTEPVV*
Ga0134076_1050862023300012976Grasslands SoilLMELDGVSAADKTVKLCDGGLPHEVRVVLGNKPPV*
Ga0134087_1075767613300012977Grasslands SoilIAVENPDQCSQGVILMELDGVSVADKIVRLCDDGLPHKVRVVLGNKPSL*
Ga0157374_1192392513300013296Miscanthus RhizosphereTELDGVSTANNTVKLCDDGMPHEVRVVLGNKPPA*
Ga0157378_1044736113300013297Miscanthus RhizosphereRGVIVMELDGVTVAGKAVKLSDDGLPHEVRVVLGNKPPA*
Ga0163162_1154446123300013306Switchgrass RhizosphereTVENPDRCSRGVVLVELDGVATVDKTVTLRNDALPHEVRVVLGIKPPDLDG*
Ga0163162_1171755213300013306Switchgrass RhizosphereRFAVENPDCCSRGVILVELDGVSVADKIVKLRDDGQTHEVRVVMGNKPST*
Ga0134079_1011057023300014166Grasslands SoilIYHIGVENPDHCSRGVALVELDGAAVADKIVTLHDDAQPHGVRVVLGANPSA*
Ga0134073_1009137833300015356Grasslands SoilVELDGVAAADKIVTLRDDALSHEVRVVLGTKPSTRGF*
Ga0132256_10250371323300015372Arabidopsis RhizosphereVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPV*
Ga0182033_1004550113300016319SoilENPDNCSRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0182033_1019817813300016319SoilPDHCSRGVTLVELDGVSVTDKVVKLRNDGLTHQVRVVLGRKLPS
Ga0182035_1157800313300016341SoilCSRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0182032_1089680313300016357SoilGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0182040_1061009513300016387SoilVENPDNCSRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0184621_1017871623300018054Groundwater SedimentQNTLYRIAVENPGHCSSGVTLVEVDGIAVADKMVTLRDDSLPHEVRVVLGTESLA
Ga0184621_1020164213300018054Groundwater SedimentPDHSSRGVTLVELDGVAAADKIVILRDDALPHEVRVVLGTKPPE
Ga0184617_122348413300018066Groundwater SedimentRGVIVMELDGVPAADKTVRLRDDGLPHEVRVVLGNKTPV
Ga0184624_1035777933300018073Groundwater SedimentVILMESDGVSAADKPVKLCDDGLPHEVRVVLGNKPPM
Ga0184625_1031012513300018081Groundwater SedimentCSLVVIVMKLDGVSAADKTVKLCDDGLPHEVRVVLGNKPPV
Ga0066655_1061605723300018431Grasslands SoilCSRGVVVVELDGVAAADKIVTLRDDALSHEVRVVLGTKPST
Ga0066662_1006195213300018468Grasslands SoilDHCSRGVTLVELDGVAAADKIVTLRDDALPHEVRVVLGTKSPP
Ga0066662_1218740313300018468Grasslands SoilPCSRGVTLVELDGVASADKVITLRDDALPHEMRVVLGIEPPKK
Ga0193720_104482113300019868SoilTLVELDGIVAAGKIVTLRNDMLSHEVRVVLGTKPPT
Ga0193715_101445313300019878SoilNPDHCSRGVIVMELDGVSAADKTVKLFDDGLPHEVRVVLGNKPV
Ga0193747_103566833300019885SoilPDHCSRGVTLVELDGIAVADKIVTLRDDALLHEVRVVLGTKPPA
Ga0193711_103373113300019997SoilDHCSGGVILMELDGVSAAEKTVKLCDDGLSHEVRVVLGNKPV
Ga0193718_110369823300019999SoilSRGVILVELDGVSAAGKTVRLCDDGLSHEVRVVLGNKPV
Ga0193735_113472913300020006SoilIAVENPDHCSRGVILMELDGVSAANKTVRLCDDGLSHKIRVVLGNKPI
Ga0193721_100425463300020018SoilCSEGVVLMELDGVAVADKIVTLRDDALPHEVRVVLGTKPST
Ga0222622_1001293553300022756Groundwater SedimentTVYHIAVENPDHCSRGVTLVELDGVPAADKIVTLRDDALPHDVRVVLGITPSA
Ga0193714_100752633300023058SoilCGGVVLVELDGVAAADKIVALRNDALHHEVRVVLGSKPAM
Ga0207692_1111614313300025898Corn, Switchgrass And Miscanthus RhizosphereRGVTLMELDGVAAAEKIVTLRDDALLHEVRVVLGTEPAA
Ga0207680_1023948313300025903Switchgrass RhizosphereGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA
Ga0207681_1055274013300025923Switchgrass RhizosphereDQCSRGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA
Ga0207690_1040349423300025932Corn RhizospherePDHCSRGVVLVELDGVATADKTVTLRNDALPHEVRVVLGIKPPDLDG
Ga0207670_1059943733300025936Switchgrass RhizosphereDHCCRGVVVTELDGVSAANNIVNLRDDGVSHEVRVVLGNKPPA
Ga0207678_1082105733300026067Corn RhizosphereRGVIVMELDGVTVAGKAAKLSDDGLPHEVRVVLGNKPPA
Ga0209688_109535223300026305SoilSRGVTLVELDGVAAADKIVTLRDDALPHEVRVVLGTEPPA
Ga0209470_102203973300026324SoilPDHCSRGVTLVELDGIAVADKIVTLRDDALPHEVRVVLGTKPSL
Ga0209152_1011451133300026325SoilLVEVDEVLAADKTVRLRDDGLPHEVRVVLGNKPPV
Ga0257173_106580213300026360SoilRGVTLVELDGVAALDKIVRLRDDALPHDVRVVLGTKPPT
Ga0209157_122361933300026537SoilSGVTLVEVDGIMVANKIVTLRDDGLRHEVRVVLGT
Ga0209157_138186123300026537SoilVENPVHCSSGVTLVEVDGITVADKIVTLRDDALRHEVRVVLGT
Ga0209156_1042293923300026547SoilQNTLYRIAVENPVHCSSGVTLVEIDGIAVADKIVRLRDDALPHEVRVVLGMEPQT
Ga0209474_1074791613300026550SoilDHCSRGVTLVELDGVAVADKIVTLRDDALPHEVRVVLGTKPPS
Ga0179587_1063737333300026557Vadose Zone SoilGVILMELDGVSAVDKTVTLCDDGLPHEVRVVLGNKPV
Ga0207475_101520213300026867SoilRGVIVMELDGVSVADKTMKLCDDGLPHEVRVVLGNKPPA
Ga0268265_1044655223300028380Switchgrass RhizosphereSRGVVLVELDGVAATDKIVTLRNDALPHEVRVVLGIKPPDLDG
Ga0307295_1010327613300028708SoilTTYRMAVENPDHCSRGVILMELDGVSAADKTVRLCDDGLFHEVRVVLGNKPM
Ga0307299_1032001323300028793SoilYSIAVENPDHCSRGVTLVELDGVPAADKIVTLRDDALPHDVRVVLGITPSA
Ga0307310_1044181033300028824SoilENPDHCSRGVVVMELDGASAADKTVRLSDDGLPHEVRVVMGSKAAV
Ga0307278_1008696313300028878SoilEGVVLMELDGVAVADKIVTLRDDALPHEVRVVLGTKPST
Ga0075386_1206020623300030916SoilVENPDHCSRGVMLMELDGVSAADKTVKLCDDGLPHEVRVVLGNIPPV
Ga0170824_10049687713300031231Forest SoilPDHCSRGVIVMELDGVSAGDKTVKLCDDGLPHEVRVVLGNKPPV
Ga0170824_12832090913300031231Forest SoilPDRCSRGVILMELDGVSAADKTVKLCDDGLPHDVRVVLGNKPPV
Ga0170820_1002138813300031446Forest SoilRGVILMELDGVSTAYKTVRLRDDGLPHEVRVVLGNKPPV
Ga0170820_1576754843300031446Forest SoilSRGVTVMELDGVSAAEKTVKLCDDGLPHEVRVVLGNKPPV
Ga0170818_10463258513300031474Forest SoilLVELDGVAAADEIVTLRNDSLPHEVRVVLGIKLPT
Ga0310813_1086321423300031716SoilIENPDHCSRGVTLVELDGVVAADKIVTLRNDMLSHEVRVVLGTKPPT
Ga0310917_1040556713300031833SoilRGVILLEVDGVSTADKKIKLRDDGQTHEVRVVLGNKPA
Ga0310917_1105022523300031833SoilEHCSRGVTLLELDGVAVADKLVTLRDDALSHQVRVVLGTKSPA
Ga0306923_1160817613300031910SoilQMELDGVSVTDKTVRLRDDGLPHEIRVVLGNKPPM
Ga0310902_1048027413300032012SoilNPDHCSRGVIVMELDGVSAADNTVRLSDDGLPHEVRVVLGNKPPA
Ga0318533_1057412013300032059SoilRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0307472_10250767123300032205Hardwood Forest SoilNPEDCSRGVTLVELDGIAVADKIVTLRDDALPHEVRVVLGTKPST
Ga0310812_1003403213300032421SoilHISVENPEHCSSGVVVTTVDGVSAADDVVNLSDDGVQHEVRVVLGNKPRA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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