NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073381

Metagenome / Metatranscriptome Family F073381

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073381
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 80 residues
Representative Sequence VTLGRLIVAWLPVAALFALAPPIGYRWDLAPDDHPLVWSFNRWEIGWRLTEAGVVTLFASLWFDSLGAGGWW
Number of Associated Samples 103
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 44.17 %
% of genes near scaffold ends (potentially truncated) 99.17 %
% of genes from short scaffolds (< 2000 bps) 82.50 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.500 % of family members)
Environment Ontology (ENVO) Unclassified
(48.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.667 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 43.00%    β-sheet: 0.00%    Coil/Unstructured: 57.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF07969Amidohydro_3 84.17
PF01979Amidohydro_1 7.50
PF07908Obsolete Pfam Family 2.50
PF14534DUF4440 1.67
PF00586AIRS 0.83
PF00291PALP 0.83
PF13147Obsolete Pfam Family 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.00 %
UnclassifiedrootN/A5.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000881|JGI10215J12807_1119065Not Available1324Open in IMG/M
3300002560|JGI25383J37093_10013090All Organisms → cellular organisms → Bacteria2741Open in IMG/M
3300002562|JGI25382J37095_10113246All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes937Open in IMG/M
3300004808|Ga0062381_10378136All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005166|Ga0066674_10540362All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005172|Ga0066683_10558327All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes698Open in IMG/M
3300005175|Ga0066673_10573693All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes659Open in IMG/M
3300005176|Ga0066679_10137911All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1517Open in IMG/M
3300005176|Ga0066679_10756997All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes624Open in IMG/M
3300005178|Ga0066688_10922879All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005406|Ga0070703_10474820All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005451|Ga0066681_10462454All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300005454|Ga0066687_10766576All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes574Open in IMG/M
3300005518|Ga0070699_100994704All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes769Open in IMG/M
3300005545|Ga0070695_100218646All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1371Open in IMG/M
3300005549|Ga0070704_101194335All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes693Open in IMG/M
3300005552|Ga0066701_10089178All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1783Open in IMG/M
3300005553|Ga0066695_10902019All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005566|Ga0066693_10081804Not Available1138Open in IMG/M
3300005575|Ga0066702_10185328All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1253Open in IMG/M
3300005598|Ga0066706_10547907All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300005713|Ga0066905_102246218All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes509Open in IMG/M
3300005843|Ga0068860_100979226All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes863Open in IMG/M
3300006032|Ga0066696_10019490All Organisms → cellular organisms → Bacteria3453Open in IMG/M
3300006034|Ga0066656_10299932All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1036Open in IMG/M
3300006791|Ga0066653_10019904All Organisms → cellular organisms → Bacteria2499Open in IMG/M
3300006797|Ga0066659_10652140All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300006852|Ga0075433_10624203All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300006854|Ga0075425_100105569All Organisms → cellular organisms → Bacteria3207Open in IMG/M
3300007265|Ga0099794_10000241All Organisms → cellular organisms → Bacteria19146Open in IMG/M
3300009038|Ga0099829_11657281All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009088|Ga0099830_10362644All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1167Open in IMG/M
3300009094|Ga0111539_13022069All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes543Open in IMG/M
3300009137|Ga0066709_100991899Not Available1229Open in IMG/M
3300009678|Ga0105252_10584743All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes515Open in IMG/M
3300009795|Ga0105059_1057613All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes533Open in IMG/M
3300010304|Ga0134088_10080999All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1516Open in IMG/M
3300010320|Ga0134109_10003010All Organisms → cellular organisms → Bacteria4242Open in IMG/M
3300010320|Ga0134109_10022687All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1939Open in IMG/M
3300010323|Ga0134086_10211555All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes727Open in IMG/M
3300010325|Ga0134064_10025618All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1702Open in IMG/M
3300010325|Ga0134064_10407704All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes544Open in IMG/M
3300010329|Ga0134111_10064372All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1356Open in IMG/M
3300010329|Ga0134111_10087340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1183Open in IMG/M
3300010329|Ga0134111_10425810All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes572Open in IMG/M
3300010329|Ga0134111_10480079All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300010333|Ga0134080_10016105All Organisms → cellular organisms → Bacteria2725Open in IMG/M
3300010337|Ga0134062_10587634All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes572Open in IMG/M
3300010364|Ga0134066_10199994All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes662Open in IMG/M
3300011409|Ga0137323_1106805All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes617Open in IMG/M
3300012035|Ga0137445_1134276All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300012096|Ga0137389_10001183All Organisms → cellular organisms → Bacteria15083Open in IMG/M
3300012096|Ga0137389_10878180All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300012173|Ga0137327_1052377All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes896Open in IMG/M
3300012354|Ga0137366_10191615All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1529Open in IMG/M
3300012356|Ga0137371_11127144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes589Open in IMG/M
3300012359|Ga0137385_11492211All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012361|Ga0137360_10179428All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1701Open in IMG/M
3300012918|Ga0137396_10119517All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1898Open in IMG/M
3300012924|Ga0137413_11533747All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes542Open in IMG/M
3300012927|Ga0137416_10402116All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1161Open in IMG/M
3300012975|Ga0134110_10570504All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012976|Ga0134076_10108068All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300015241|Ga0137418_10986304All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes611Open in IMG/M
3300015357|Ga0134072_10084765All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes948Open in IMG/M
3300015358|Ga0134089_10017127All Organisms → cellular organisms → Bacteria2426Open in IMG/M
3300015358|Ga0134089_10083257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1208Open in IMG/M
3300015358|Ga0134089_10356213All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300017654|Ga0134069_1212728All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes663Open in IMG/M
3300017657|Ga0134074_1035979All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1660Open in IMG/M
3300017659|Ga0134083_10009302All Organisms → cellular organisms → Bacteria3252Open in IMG/M
3300017659|Ga0134083_10370138All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes620Open in IMG/M
3300018063|Ga0184637_10042593All Organisms → cellular organisms → Bacteria2761Open in IMG/M
3300018071|Ga0184618_10196492All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300018073|Ga0184624_10541769All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes503Open in IMG/M
3300018082|Ga0184639_10037264All Organisms → cellular organisms → Bacteria2492Open in IMG/M
3300018433|Ga0066667_10080127All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300018468|Ga0066662_10024337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3469Open in IMG/M
3300018468|Ga0066662_10055722All Organisms → cellular organisms → Bacteria2551Open in IMG/M
3300019259|Ga0184646_1409829All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes582Open in IMG/M
3300020006|Ga0193735_1091436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes858Open in IMG/M
3300020015|Ga0193734_1057509All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300020018|Ga0193721_1138175All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes598Open in IMG/M
3300021073|Ga0210378_10101499Not Available1120Open in IMG/M
3300021080|Ga0210382_10047173All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1683Open in IMG/M
3300021086|Ga0179596_10614824All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300021510|Ga0222621_1000537All Organisms → cellular organisms → Bacteria4631Open in IMG/M
3300021951|Ga0222624_1581455All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300022694|Ga0222623_10027042All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2164Open in IMG/M
3300022694|Ga0222623_10091340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1182Open in IMG/M
3300022694|Ga0222623_10369895All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300022756|Ga0222622_11328597All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes529Open in IMG/M
3300025155|Ga0209320_10237136All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300025155|Ga0209320_10338462Not Available618Open in IMG/M
3300025319|Ga0209520_10674950All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300025922|Ga0207646_11582147All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300026296|Ga0209235_1031457All Organisms → cellular organisms → Bacteria2732Open in IMG/M
3300026312|Ga0209153_1094792Not Available1115Open in IMG/M
3300026313|Ga0209761_1058439All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2113Open in IMG/M
3300026313|Ga0209761_1065808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1948Open in IMG/M
3300026324|Ga0209470_1257812All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes694Open in IMG/M
3300026334|Ga0209377_1195703All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300026334|Ga0209377_1212246All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300026343|Ga0209159_1053429All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1967Open in IMG/M
3300026343|Ga0209159_1279808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes509Open in IMG/M
3300026524|Ga0209690_1047873All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1931Open in IMG/M
3300026530|Ga0209807_1060459All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1721Open in IMG/M
3300026538|Ga0209056_10013024All Organisms → cellular organisms → Bacteria8351Open in IMG/M
3300026540|Ga0209376_1385984All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes524Open in IMG/M
3300027643|Ga0209076_1200830All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes547Open in IMG/M
3300027738|Ga0208989_10089726All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1049Open in IMG/M
3300027846|Ga0209180_10657524All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes574Open in IMG/M
3300028381|Ga0268264_12498522All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300028536|Ga0137415_11215245All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes569Open in IMG/M
3300031720|Ga0307469_11964702All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes567Open in IMG/M
3300031965|Ga0326597_11593177All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes622Open in IMG/M
3300033812|Ga0364926_107034All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300033814|Ga0364930_0012966All Organisms → cellular organisms → Bacteria2772Open in IMG/M
3300033815|Ga0364946_045498All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes902Open in IMG/M
3300034178|Ga0364934_0075910All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1253Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil22.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil19.17%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.50%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.17%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.17%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.33%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.33%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment3.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.50%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.67%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.83%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300012035Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300033812Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17EnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10215J12807_111906513300000881SoilVTFGRLVVAWLPVAALFCLAPPIGYQWNQPAEQQQPLPLHPSGWECGWRFAEAGVLTLFASLWFDSLG
JGI25383J37093_1001309033300002560Grasslands SoilVTLGRLIVSWLPVAALFALAPPIGYRWDRPPDNRAVVWSFNRWEIGWRLLEAAVLTLFASLWFESLGAGEWWLVFLLVGLLVAFPR
JGI25382J37095_1011324623300002562Grasslands SoilVSLGRLALAWLPVAALFVVTPPIGYPWDDAAEQRVLAWVPNRWEVCWRLAEAAVLTLFASLWFDSLGAGGWWLLFLLVGLLAAFPRRLVMWRSVPPPHRRAL
Ga0062381_1037813613300004808Wetland SedimentVTLGRLILAWLPVAALFALAPPLGYRWDQPADARPIVWSANRWEIGWRVAEAGIVTLFAALWFDSLGSGGWWVLFLLVGLLVAFPRRLVM
Ga0066674_1054036213300005166SoilVTLSRLILAWLPVAALFALAPPIGYRWDLPPDDRSLVWSFNRWEIGWRLIEAGVVTLFASLWFDSLGAGEAWLLFLL
Ga0066683_1055832723300005172SoilVTLGRLLGAWLPVALLFALTPPIGYRWDGALNQGHFAWSFNRWEIGWRLAEAAVLTLFASLWFDSLGAGGWWLLFLLVGLLVAFPRRLVMWQHV
Ga0066673_1057369323300005175SoilVTFGRLLVAWLPVAALFTLAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLL
Ga0066679_1013791113300005176SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIDRHSVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLF
Ga0066679_1075699723300005176SoilVTLGRLIVSWLPVAALFALAPPIGYRWDLPSDKSALAWSLNRWEIGWRLAEAAVLTLFASLWFDSLGAGEWWLVFLLVGLLAAFPRRLV
Ga0066688_1092287923300005178SoilVTLGRLIVSWLAVVALFALAPPIGYRWDLSSDKGALVWSLNRWEIGWRLAEAAVLTLFASLWFD
Ga0070703_1047482013300005406Corn, Switchgrass And Miscanthus RhizosphereVTFGRLVVAWLPVAALFCLAPPVGYQWNQPAEQQRPLPLHPSGWECGWRFAEAGVLTLFASLWFDSLGAGGWW
Ga0066681_1046245423300005451SoilMTLGRLLLAWLPVAALFAVAPPIGYPWGRPDVARPLAWSLNHWEIVWRVAEAFVVTLLAALWFDSLGAG
Ga0066687_1076657623300005454SoilVTLGRLIVSWLPVAALFALAPPIGYRWDLPSDKSALAWSLNRWEIGWRLAEAAVLTLFASLWFDSLGAGEWWLVFLLVGLLAAFPR
Ga0070699_10099470413300005518Corn, Switchgrass And Miscanthus RhizosphereVTLGRLLGAWLPVAILFAVTPPIGYRWEGALTQGPFAWSFNRWEIGWRLAEAAVLTLFAALWFDSLGA
Ga0070695_10021864613300005545Corn, Switchgrass And Miscanthus RhizosphereVTFGRLVVAWLPVAALFCLAPPVGYQWNQPAEQQRPLPLHPSGWECGWRFAEAGVLTLFASLWFDSLGAGGWWLLFALLGLLVA
Ga0070704_10119433513300005549Corn, Switchgrass And Miscanthus RhizosphereVTFGRLVVAWLPVAALFCLAPPIGYQWNQPAEQQQPLPLHPSGWECGWRFAEAGVLTLFASLWFDSLGAGGWWLL
Ga0066701_1008917823300005552SoilVSLGRLLLAWLPVAALFVVAPPIGDRWEGVVGQGYFVWSYSRWEVWWRLVEAAVVVLFGSLWFDTLG
Ga0066695_1090201913300005553SoilVTLSRLILAWLPVAALFALAPPIGYRWELPPDDRSLVWSFNRWEIGWRLIEAGVVTLFASLWFDSLGAGEAWLLFLL
Ga0066693_1008180413300005566SoilLPVAALFALAPPIGYRWDLPSDKSALAWSLNRWEIGWRLAEAAVLTLFASLWFDSLGAGEWWLVFL
Ga0066702_1018532823300005575SoilVTLGRLIGAWLPVAVLFALAPPIGYRWDLPPDNRPVAWSFNRWEIGWRLAEAGVVTLFASLWFDSLGAGGWWFLFLLVGLLVAFPRRLV
Ga0066706_1054790723300005598SoilVTLGRLIVSWLPVAALFALAPPIGYRWDLPPDNHALVWSFNRWEMGWRLAEAALLTLFASLWFDSLGAGEWWLVF
Ga0066905_10224621823300005713Tropical Forest SoilVTFGRLIVAWLPVAALFCLAPPIGYHWNLPAEQQPPLPVHPNGWECGWRFAEAGVLTLFASLWFDSLGAGGWWVLFALVGLLVAFPRRLVMWQ
Ga0068860_10097922623300005843Switchgrass RhizosphereVTFGRLVVAWLPVAALFCLAPPVGYQWNQPAEQQRPLPLHPSGWECGWRFAEAGVLTLFASLWFDSLGAGGWWLLFALLGLLVAFP
Ga0066696_1001949043300006032SoilVTLGRLVGAWLPVAILFAVAPPIGYRWDQAIVQNAVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVAFPRRLVM
Ga0066656_1029993213300006034SoilVTFGRLLVAWLPVAALFTIAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLLF
Ga0066653_1001990413300006791SoilVTFGRLLVAWLPVAALFTLAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSRGAGGWWLLFFLVGLLVAFPRRLVMW
Ga0066659_1065214023300006797SoilVTLGRLIVSWLPVAALFALAPPIGYRWDRPPDNRAVVWSFNRWEIGWRLLEAAVLTLFASLWFESLGA
Ga0075433_1062420323300006852Populus RhizosphereVTLGRLILAWLPVAALFAAAPPLGYRWGGDLPPDQRPLVWSFNRWEIGWRLVEAAVVTLFASLWFDSLGAGGWWLLFLLVGL
Ga0075425_10010556933300006854Populus RhizosphereVTLSRLIIAWLPVAALFAVAPPLGYRWGAGGGDPPPDQRALVWSFNLWEIGWRLLEAAVVTLIASLWFDTLGTGGSWLLFLLVGL
Ga0099794_1000024113300007265Vadose Zone SoilVTLGRLFVSWLPVAALFAVAPPIGYRWDLPPVDRALVWSFNRWEIGWRLGEAAVLTLFASLWFDSLGAGQWWLVFLLVGLLV
Ga0099829_1165728123300009038Vadose Zone SoilVTLGRLIVAWLPVAALFALAPPIGYRWDLAPDDHPLVWSFNRWEIGWRLTEAGVVTLFASLWFD
Ga0099830_1036264423300009088Vadose Zone SoilVTLGRLIVAWLPVAALFALAPPIGYRWDLAPDDHPLVWSFNRWEIGWRLTEAGVVTLFASLWFDSLGAGGWWVLFLLVGLLVAFPRRLVMWQHVEPLRR
Ga0111539_1302206923300009094Populus RhizosphereVSFGRLIVAWLPVAALFCLAPPIGYRWNEAPEQQRPLPVHPNSWECGWRFAEAGVLTLFASLWFDSLGSGGWWLLFTLVGLLVAFPRRLVMWQHVDAQR
Ga0066709_10099189913300009137Grasslands SoilVTLGRLILAWLPVAALFAVAPPLGYRWGGGGALPPDQRALVWSFNLWEVFWRLVEAAVVTLFASLWFDTLGAGG
Ga0105252_1058474323300009678SoilVTFGRLVVAWLPVAALFCLAPPIGYRWNEAPEQQRPLPVHANGWECGWRFAEAGVLTLFASLWFDSLGSGGWWLLFTLV
Ga0105059_105761313300009795Groundwater SandVTLGRLLLAWLPVAALFVLAPPVGYAWNDAAADRAVVWSFNRWELGWRLAEAGVITLFASLWFDSLGAGGWWLLFLLVGLLVAFPRRL
Ga0134088_1008099913300010304Grasslands SoilVTFGRLIVAWLPVAALFAIAPPLGYRWDLPSEKQRPLVWNYNRWECGWRAVEAAILTLFASLWFDSLGSGGWWLLFLLLGLLVAFPRRLVMWQ
Ga0134109_1000301013300010320Grasslands SoilVTLGRLVAAWLPVAILFAVAPPIGYRWDQAIGQNSVVWSLNRWEIGWRLAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVAFPRRLVMW
Ga0134109_1002268713300010320Grasslands SoilVTLGRLVGAWLPVAILFAVAPPIGYRWDQAIVQNAVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVAFPRRLVMWQYV
Ga0134086_1021155513300010323Grasslands SoilVTFGRLLVAWLPVAALFTIAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLLFLLVGLL
Ga0134064_1002561813300010325Grasslands SoilVTLGRLVGAWLPVAILFTVAPPIGYRWDQAIVQNAVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVG
Ga0134064_1040770423300010325Grasslands SoilVTFGRLLVAWLPVAALFTLAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLLFFLVGLLVAFPRRLVMWRHV
Ga0134111_1006437223300010329Grasslands SoilMVAWLPVAALFTIVPPIGYRWDLPPDHHALVWSFHRWEIGWRWVEALVVTLFASLWFDSLGAGEWWLLFALVGLLVAFPRRLVMWQHVDG
Ga0134111_1008734023300010329Grasslands SoilVTLGRLIVSWLPVAALFALAPPIGYRWDQPPDNRAVAWSFNRWEIGWRLVEAAVLTLFASLWFDSLGAGEWWLVFLLVGLLVAFPRRLVMWQHVEPRNATSRPTSRNTS
Ga0134111_1042581023300010329Grasslands SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIGRHSVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGEQRGHCGLG
Ga0134111_1048007913300010329Grasslands SoilVTLSRLILAWLPVAALFALAPPIGYRWDLPPDDRSLVWSFNRWEIGWRLIEAGVVTLFASLWFDSLGAGEAWLLFLLLGL
Ga0134080_1001610513300010333Grasslands SoilVTFGRLIVAWLPVAALFAIAPPLGYRWDLPSEKQRPLVWNYNRWECGWRAVEAAILTLFASLWFDSLGSGGWWLLFLLLGLLVAFPRRLVM
Ga0134062_1058763413300010337Grasslands SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIGRHSVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVGFPRRLVMW
Ga0134066_1019999413300010364Grasslands SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIGQHPVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVA
Ga0137323_110680513300011409SoilVTFGRLIVAWLPVAALFCLAPPIGYRWNEAPEQQRPLPLHPNGWECGWRFGEAGVLTLFASLWFDSLGSGGWWLLFTLV
Ga0137445_113427613300012035SoilVTLGRLIVAWLPVAALFCLAPPIGYRWNEAPEQQRPLPLHPNGWECGWRFGEAGVLTLFASLWFDSLGSGGWWLLFT
Ga0137389_1000118313300012096Vadose Zone SoilVTLGRLFVSWLPVAALFAVAPPIGYRWDLPPVDRALVWSFNRWEIGWRLGEAAVLTLFASLWFDSLGTGEWWLVFLLVGLLVAFPRRL
Ga0137389_1087818023300012096Vadose Zone SoilVSLDRLALAWLPVAVLFVVTPPIGYRWDDAAEQRLLAWVPNRWEGCWRLAEAAVLTLFASLWLDSLGAG
Ga0137327_105237723300012173SoilVTFGRLIVAWLPVAALFCLAPPIGYRWNEAPEQQRPLPLHPNGWECGWRFGEAGVLTLFASLWFDSLGSGGWWLLFTLVGLLVAFPRRLVMWQ
Ga0137366_1019161513300012354Vadose Zone SoilVTPGRLILAWLPVAALFAVAPPIGYRWGGGGDLPPGQRAVVWSFNAWEIFWRLVEAAVVTLFASLWFDTLGAGGYWVLFLLVGLLVAFPRRLVMW
Ga0137371_1112714413300012356Vadose Zone SoilVTFGRLLVAWLPVAALFTIAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLLFLLVGLLVA
Ga0137385_1149221113300012359Vadose Zone SoilVTLGRLILAWLPVAALFAVAPPLGYRWGGGAGGALPSDQRALVWSFNLWEIFWRLVEAAVVTLVASLWFDTLGTGGWWLL
Ga0137360_1017942813300012361Vadose Zone SoilVTLGRLILAWLPVAALFAAAPPIGYRWGGQLPPDQRPLTWSLNRWEIGWRLIEAAVVTLFASLWFESLGAGGWWLLFL
Ga0137396_1011951713300012918Vadose Zone SoilVSLGRLLLAWLPVAALFVVAPPIGDRWDMWVGKGYFIWSYSRWDAGWRLVEAAVVVLFASLWFDTLGAGGWWLLFFLVGLLVAFP
Ga0137413_1153374713300012924Vadose Zone SoilVTLGRLILAWLPVAALFAAAPPIGYRWGGQLPPDQRPLTWSLNRWEIGWRLIEAAVVTLFASLWFESLGAGGWWLLFLLVGLLVAFPRRLVMWQHVDALRR
Ga0137416_1040211613300012927Vadose Zone SoilVTLGRLIVSWLPVAALFALAPPIGYRWDQPLDNRAVVWSFNRWEIGWRLGEAAVLTLFASLWFDSLGAGEWWLVFLLVGLLAAFPRRLVMWQHV
Ga0134110_1057050423300012975Grasslands SoilMTLGRLLLAWLPVAALFAVAPPIGYPWSRPDVARPLAWSLNRWEIAWRLAEAFVVTLLAALWFDSLGAGGWWL
Ga0134076_1010806813300012976Grasslands SoilVTFGRLIVAWLPVAALFAIAPPLGYRWDLPSEKQRPLVWNYNRWECGWRAVEAAILTLFASLWFDS
Ga0137418_1098630423300015241Vadose Zone SoilVTLGRLVAAWLPVAILFAVALGQSSVVVWSFNRWEIGWRLAEAVVVTLFASLWFDSLGAGGWWLLFFLVGLLVAFPRRLVMLQYVEPPRR
Ga0134072_1008476523300015357Grasslands SoilVTLGRLVAAWLPVAILFAVAPPIGYRWDQAIGQNSVVWSLNRWEIGWRLAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVA
Ga0134089_1001712713300015358Grasslands SoilVTFGRLIVAWLPVAALFAIAPPLGYRWDLPSEKQRPLVWNYNRWECGWRAVEAAILTLFASLWFDSLGSGGWWLLFLLLGLLVA
Ga0134089_1008325713300015358Grasslands SoilVTLGRLLGAWLPVALLFAVTPPIGYRWDGALNQGHFAWSFNRWEIGWRLAEAAVLTLFASLWFDS
Ga0134089_1035621313300015358Grasslands SoilVTLSRLILAWLPVAALFALAPPIGYRWDLPPDDRSLVWSFNRWEIGWRLIEAGVVTLFASLWFDSLGAGEAW
Ga0134069_121272813300017654Grasslands SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIGRHSVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLF
Ga0134074_103597913300017657Grasslands SoilVTLGRLVGAWLPVAILFAVAPPIGYRWDQAIVQNAVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVAFPRR
Ga0134083_1000930233300017659Grasslands SoilVTLGRLLGAWLPVALLFALTPPIGYRWDGALNQGHFAWSFNRWEIGWRLAEAAVLTLFASLWFDSLG
Ga0134083_1037013813300017659Grasslands SoilVTFGRLIVAWLPVAALFAIAPPLGYRWDLPSEKQRPLVWNYNRWECGWRAVEAAILTLFASLWFDSLGSGGWWLLFLLLGLLVAF
Ga0184637_1004259313300018063Groundwater SedimentVTLGRLVLAWLPVAALFALAPPIGYRWDLPPDHRYLVLSFNRWEVGWRVVEAGVVTLFASLWFDSLGAGEWWLLFLLVGLLVA
Ga0184618_1019649223300018071Groundwater SedimentMTLGRLFLAWLPVAALFAVTPPIGYHWTGEVTGVRAFVWSHNRWEIWWRLAEAGVVTLFASLWFDSLGA
Ga0184624_1054176913300018073Groundwater SedimentMTLGRLILAWLPVAALFALTPPIGYAWTGDVTGVPAVVWHHNRWEVWWRLAEAGVVTLFASLWFDSLGAGGWWL
Ga0184639_1003726413300018082Groundwater SedimentVTLGRLVLAWLPVAAFFALAPPIGYRWDLPPDHRFLVLSFNRWEVGWRVVEAGVVTLFASLWFDSLGA
Ga0066667_1008012713300018433Grasslands SoilVTFGRLLVAWLPVAALFTLAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLLF
Ga0066662_1002433743300018468Grasslands SoilVTLGRLVGAWLPVAILFTVAPPIGYRWDQAIVQNTVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGTGGWWLLFFLVGLLVAFPRRLVMWQYVE
Ga0066662_1005572223300018468Grasslands SoilVTLGRLIVSWLPVAALFALAPPMGYRWDLPLVDRAVVWSFNRWEIGWRLVEAAVLTLFAALWFDSLGSGEWWLVFLLVGLLAAFPRRLVM
Ga0184646_140982923300019259Groundwater SedimentMTLGRLIVAWLPVAALFALAPPLGYRWDLAPDQRALPWAPNRWESGWRVAEAGVATLFASLWFDSLGAGGWWLLFL
Ga0193735_109143613300020006SoilLTLGRLVLAWLPVAALFAATPPIGYPWAGEPVEKGFFVWSFNRWEIGWRLAEAGVVTLFASLWFDSLGAGGWWLLF
Ga0193734_105750913300020015SoilLTLGRLVLAWLPVAALFAATPPIGYPWAGEPVEKGFFVWSFNRWEIGWRLAEAGVVTLFASLWFDSLGAGGW
Ga0193721_113817513300020018SoilVTLGRLIVAWLPVAVLFALAPPIGYRWDLPPDDRPIVWSFNRWEIGWRLAEAGVVTLFASLWFDSLGAGGWWLLFLLIGLLVAFPRRLVMW
Ga0210378_1010149913300021073Groundwater SedimentVTLGRLLLAWLPVAALFAVTPPIGYHWTGEVTGVRAFVWSHNRWEIWWRLAEAGVVTLF
Ga0210382_1004717313300021080Groundwater SedimentVSLGRLLLAWLPVAALFAVTPPIGYHWTGDVTGVRAFVWSHNRWEIWWRLAEAGIVTLFASLWFDSLGAGGWW
Ga0179596_1061482423300021086Vadose Zone SoilVTLGRLILAWLPVAALFAAAPPIGYRWGGKLPPDQRPLTWSFNRWEIGWRLIEAAVVTLFASLWFESLGAGG
Ga0222621_100053763300021510Groundwater SedimentVSLGRLLLAWLPVAALFAVTPPIGYHWTGDVTGVRAFVWSHNRWEIWWRLAEAGIVTLFASLWFDSLGAGGWWLLFLLVG
Ga0222624_158145523300021951Groundwater SedimentVSLGRLLLAWLPVAALFAVTPPIGYHWTGDVTGVRAFVWSHNRWEIWWRLAEAGIVTLFASLWFDSL
Ga0222623_1002704213300022694Groundwater SedimentVSLGRLLLAWLPVAALFAVTPPIGYHWTGDVTGVRAFVWSHNRWEIWWRLAEAGIVTLFASLWFDSLGAGGWWLLFLL
Ga0222623_1009134013300022694Groundwater SedimentVTLGRLLLAWLPVAALFAVTPPIGYHWTGEVTGVRAFVWSHNRWEIWWRLAEAGVVTLFASLWFDSLGAGGWW
Ga0222623_1036989513300022694Groundwater SedimentVTLGRLLLAWLPVAALFAVTPPIGYPWGGEVPERRFFVWTFNRWEIGWRLAEAGVVTL
Ga0222622_1132859713300022756Groundwater SedimentVTLGRLLLAWLPVAALFAVTPPIGYHWTGEVTGVRAFVWSHNRWEIWWRLAEAGVVTLFASLWFDSLGAGGWWLLFF
Ga0209320_1023713623300025155SoilVSLGRLLLAWLPVAALFVVAPPIGYRWGGDVVVGNGAFVWSFDRWEIGWRLAEAAVVTLFASLWFDSL
Ga0209320_1033846213300025155SoilMTLGRLLLAWLPVAALFAVAPPIGYRWDMVVGNGFLVWSFNRWEIGWRLAEAAVVTLFASLWFDSLGAGSSWLLFFLVGLLIAFPRRLVMWQYVDP
Ga0209520_1067495013300025319SoilVTLGRLIVAWLPVAVLFAVAPPIGYRWDLPPDERSLSWAFNQWEIGWRVAEAGVVTLFASLWFDSLGAGG
Ga0207646_1158214723300025922Corn, Switchgrass And Miscanthus RhizosphereMTLGRLILAWLPVAVLFALTPPIGYAWTGDVTGVPAVVWHHNRWEVWWRLAEAGVVTLFASLWFDS
Ga0209235_103145713300026296Grasslands SoilVTLGRLIVSWLPVAALFALAPPIGYRWDRPPDNRAVVWSFNRWEIGWRLLEAAVLTLFASLWFESLGAGEWWLVFLLVGLLVA
Ga0209153_109479223300026312SoilVTLGRLIVSWLPVAALFALAPPIGYRWDLPSDKSALVWSLNRWEIGWRLAEAAVLTLFASLWFDSLGAGEWWLVF
Ga0209761_105843933300026313Grasslands SoilVTLGRLIVSWLPVAALFALAPPIGYRWDQPLDNRAVAWSFNRWEIGWRLVEAAVLTLFASLWFDSLGAGEWWLVFLLVGLLVAFPRRLVMWQHVEPLRRR
Ga0209761_106580823300026313Grasslands SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIDRHSVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWL
Ga0209470_125781213300026324SoilVTLGRLIVSWLPVAALFALAPPIGYRWDQPPDNRAVAWSFNRWEIGWRLVEAAVLTLFASLWFDSLGAGEWWLVFLLVGLLVAFPRRLVMWQHVEPLR
Ga0209377_119570323300026334SoilVSLGRLLLAWLPVATLFVVAPPIGDRWEGVVGQGYFVWSYSRWEVWWRLVEAAVVVLFGSLWF
Ga0209377_121224623300026334SoilVTLSRLILAWLPVAALFALAPPIGYRWDLPPDARSLVWSFNRWEIGWRLIEAGVVTLFASLWFDSLGAGEAWLLFLLIGLL
Ga0209159_105342923300026343SoilVTFGRLLVAWLPVAALFTLAPPIGYRWDLPPDNRALVWSWNRWEIGWRWVEALVLTLFASLWFDSLGAGGWWLLFLLVGLLVAFPRRLVMWRHVDP
Ga0209159_127980813300026343SoilVTLGRLLGAWLPVALLFAVTPPIGYRWDGALNQGHFAWSFNRWEIGWRLAEAAVLTLFASLWFDSLGAGGWWLPFLLVGLLVAFP
Ga0209690_104787313300026524SoilVSLGRLLLAWLPVAALFVVAPPIGDRWEGVVGQGYFVWSYSRWEVWWRLVEAAVVVLFGSLWFDTLGAGGWGVLFFLVGLLVAFPRRL
Ga0209807_106045923300026530SoilVTLGRLVGAWLPVAILFTVAPPIGYRWDQAIVQNTVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGTGGWWLLFFLVGL
Ga0209056_1001302413300026538SoilVTLGRLIVSWLPVAALFALAPPIGYRWDQPPDNRAVAWSFNRWEIGWRLVEAAVLTLFASLWFDSLGAGE
Ga0209376_138598413300026540SoilVTLGRLVGAWLPLAILFAVAPPIGYRWDQAIGRHSVVWSFNRWEIGWRVAEAAVVTLFAALWFDSLGAGGWWLLFFLVGLLVGFPRRLVMWQYVEP
Ga0209076_120083023300027643Vadose Zone SoilVSLGRLLLAWLPVAALFVVAPPIGDRWDMWVGKGYFIWSYSRWDAGWRLVEAAVVVLFASLWFDTLGAGGWWLLFFLVGLLVAFPRRLAVWQ
Ga0208989_1008972623300027738Forest SoilVTLGRLILAWLPVAALFAIAPPIGYRWDLPPDNRPLVWSLNRWEIGWRLVEAVVVTLFASLWFDSLGSGEWWLLFLLVGLLVAFPRRL
Ga0209180_1065752413300027846Vadose Zone SoilVTLGRLIVAWLPVAALFALAPPIGYRWDLAPDDHPLVWSFNRWEIGWRLTEAGVVTLFASLWFDSLGAGGWW
Ga0268264_1249852213300028381Switchgrass RhizosphereVTFGRLVVAWLPVAALFCLAPPVGYQWNQPAEQQRPLPLHPSGWECGWRFAEAGVLTLFASLWFDSLGA
Ga0137415_1121524513300028536Vadose Zone SoilVTLGRLVAAWLPVAILFAVAPPIGYRWDQAFGQSSVVVWSFNRWEIGWRLAEAVVVTLFASLWFDSLGAGGWWLL
Ga0307469_1196470223300031720Hardwood Forest SoilMRGPGAACAAPATAGRAASVTLGRLLLAWLPVAALFVLAPPVGYAWNDAAADRAVVWSFNRWELGWRLAEAGIVTLFASLWFDSLGAGGWWLLF
Ga0326597_1159317723300031965SoilVSLGRLLLAWLPVAALFVVAPPIGYRWDGDVVVGKGAFVWSFNRWEIGWRLAEAGVVTLFASLWFDSLGAGGWWL
Ga0364926_107034_286_5793300033812SedimentVSLGRLLLAWLPVAALFAVTPPIGYLWAGEVVGKGAFVWTFNRWEIRWRLVEAAVVTLFASLWFDSLGAGSSWLLFFLVGLLVAFPRRLVMWQHVEPQ
Ga0364930_0012966_2577_27713300033814SedimentMSLGRLLLTWLPVAALFVVAPPIGYRWDGDVVVGKGAFVWSFNRWEIGWRLAEAGVVTLFASLWF
Ga0364946_045498_675_9023300033815SedimentVTLGRLIVAWLPVAVLFALAPPLGYRWDLPADNRVIVWSVNRWEIGWRLAEAGVVTLFASLWFDSLGSGGWWLLFL
Ga0364934_0075910_996_12533300034178SedimentVTLGRLFLAWLPVAALFAVTPPIGYPWAGEAIEQRVFVWKGNRWEIGWRLAEAGVVTLFASLWFDSLGAGGWWLLFFLVGLLIAFP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.