NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F073626

Metagenome Family F073626

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073626
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 66 residues
Representative Sequence MGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF
Number of Associated Samples 101
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.50 %
% of genes near scaffold ends (potentially truncated) 45.00 %
% of genes from short scaffolds (< 2000 bps) 87.50 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.667 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere
(12.500 % of family members)
Environment Ontology (ENVO) Unclassified
(60.833 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.667 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.89%    β-sheet: 0.00%    Coil/Unstructured: 81.11%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF028262-Hacid_dh_C 55.00
PF04397LytTR 27.50
PF06580His_kinase 5.00
PF08818DUF1801 1.67
PF01527HTH_Tnp_1 1.67
PF16177ACAS_N 0.83
PF14905OMP_b-brl_3 0.83
PF12681Glyoxalase_2 0.83
PF00834Ribul_P_3_epim 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG2972Sensor histidine kinase YesMSignal transduction mechanisms [T] 5.00
COG3275Sensor histidine kinase, LytS/YehU familySignal transduction mechanisms [T] 5.00
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 1.67
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 1.67
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 1.67
COG0036Pentose-5-phosphate-3-epimeraseCarbohydrate transport and metabolism [G] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.67 %
UnclassifiedrootN/A18.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_12179457Not Available848Open in IMG/M
2199352025|deepsgr__Contig_69836All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1303Open in IMG/M
3300000559|F14TC_101966675All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300000789|JGI1027J11758_13006251All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax655Open in IMG/M
3300000953|JGI11615J12901_10103321All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium563Open in IMG/M
3300001431|F14TB_102449881All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300002099|JGI24808J26613_1004509All Organisms → cellular organisms → Bacteria3776Open in IMG/M
3300002100|JGI24809J26612_1004057All Organisms → cellular organisms → Bacteria4244Open in IMG/M
3300004114|Ga0062593_100307564All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300004114|Ga0062593_100928344Not Available883Open in IMG/M
3300004114|Ga0062593_100928413All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300004114|Ga0062593_102808417All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300004463|Ga0063356_100005366All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes11110Open in IMG/M
3300005294|Ga0065705_10674384All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300005327|Ga0070658_11041309Not Available712Open in IMG/M
3300005328|Ga0070676_11472549Not Available524Open in IMG/M
3300005329|Ga0070683_101006733All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005330|Ga0070690_100479900All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes927Open in IMG/M
3300005330|Ga0070690_101378528All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300005331|Ga0070670_100830012All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300005334|Ga0068869_100452052All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300005335|Ga0070666_10171645All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales1519Open in IMG/M
3300005337|Ga0070682_101495238All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300005344|Ga0070661_101655571All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300005345|Ga0070692_11302956Not Available521Open in IMG/M
3300005354|Ga0070675_100513741All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300005364|Ga0070673_101001545All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae778Open in IMG/M
3300005366|Ga0070659_101171415Not Available679Open in IMG/M
3300005366|Ga0070659_101262924Not Available654Open in IMG/M
3300005455|Ga0070663_100091950All Organisms → cellular organisms → Bacteria2249Open in IMG/M
3300005455|Ga0070663_100216729All Organisms → cellular organisms → Bacteria1501Open in IMG/M
3300005456|Ga0070678_102130627All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005457|Ga0070662_101602827All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300005458|Ga0070681_11151262All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium697Open in IMG/M
3300005535|Ga0070684_100323323All Organisms → cellular organisms → Bacteria1417Open in IMG/M
3300005535|Ga0070684_100712495All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300005543|Ga0070672_100517036All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300005543|Ga0070672_101695468Not Available568Open in IMG/M
3300005544|Ga0070686_100786625Not Available766Open in IMG/M
3300005548|Ga0070665_101025929Not Available837Open in IMG/M
3300005577|Ga0068857_100697180All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes965Open in IMG/M
3300005578|Ga0068854_101341338Not Available645Open in IMG/M
3300005616|Ga0068852_101668425All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300005841|Ga0068863_100291795All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1581Open in IMG/M
3300005844|Ga0068862_100166294All Organisms → cellular organisms → Bacteria1972Open in IMG/M
3300006031|Ga0066651_10699691Not Available544Open in IMG/M
3300006358|Ga0068871_100143194All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2034Open in IMG/M
3300006871|Ga0075434_102068158All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300006954|Ga0079219_10012919All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2872Open in IMG/M
3300009093|Ga0105240_11952278All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300009101|Ga0105247_10560413All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes841Open in IMG/M
3300009545|Ga0105237_11813123All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300009553|Ga0105249_11151859All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes846Open in IMG/M
3300010047|Ga0126382_10775883Not Available814Open in IMG/M
3300010359|Ga0126376_12841244All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010360|Ga0126372_12937702Not Available528Open in IMG/M
3300010397|Ga0134124_10241667All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium1657Open in IMG/M
3300010400|Ga0134122_10163508All Organisms → cellular organisms → Bacteria1820Open in IMG/M
3300010403|Ga0134123_11251397All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium775Open in IMG/M
3300011119|Ga0105246_11667899All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300012212|Ga0150985_117729810Not Available543Open in IMG/M
3300012469|Ga0150984_117914299All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300012489|Ga0157349_1047206All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300012948|Ga0126375_10329266All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300012948|Ga0126375_11018557All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300012955|Ga0164298_10272659All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1033Open in IMG/M
3300012957|Ga0164303_10088831All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300012958|Ga0164299_10194002All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1167Open in IMG/M
3300012960|Ga0164301_10329422All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300012989|Ga0164305_10423199All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300013100|Ga0157373_11538436All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300013102|Ga0157371_11451897All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300013297|Ga0157378_10018280All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes6153Open in IMG/M
3300014745|Ga0157377_10689337All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300014969|Ga0157376_10807749All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300014969|Ga0157376_12162432All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium595Open in IMG/M
3300015371|Ga0132258_10363023All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3586Open in IMG/M
3300015371|Ga0132258_10657986All Organisms → cellular organisms → Bacteria2635Open in IMG/M
3300015374|Ga0132255_102282881All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300017792|Ga0163161_11077596All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300021445|Ga0182009_10467109All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300022883|Ga0247786_1013326All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300025315|Ga0207697_10465481All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300025735|Ga0207713_1185788All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300025901|Ga0207688_10257798All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300025903|Ga0207680_10033023All Organisms → cellular organisms → Bacteria2948Open in IMG/M
3300025903|Ga0207680_10437729Not Available927Open in IMG/M
3300025904|Ga0207647_10081797All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae1935Open in IMG/M
3300025908|Ga0207643_10438385Not Available830Open in IMG/M
3300025911|Ga0207654_10826554All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300025912|Ga0207707_10928541All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium718Open in IMG/M
3300025919|Ga0207657_10853544All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300025920|Ga0207649_10002192All Organisms → cellular organisms → Bacteria11033Open in IMG/M
3300025920|Ga0207649_10798367Not Available737Open in IMG/M
3300025920|Ga0207649_11007792All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300025920|Ga0207649_11604864All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300025923|Ga0207681_10848315All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes764Open in IMG/M
3300025931|Ga0207644_10231513All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae1468Open in IMG/M
3300025931|Ga0207644_11378065All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium592Open in IMG/M
3300025933|Ga0207706_10429078All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300025938|Ga0207704_11267944All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300025940|Ga0207691_10634742All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300025940|Ga0207691_11300105Not Available601Open in IMG/M
3300025941|Ga0207711_11850139All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300025945|Ga0207679_10171674All Organisms → cellular organisms → Bacteria1786Open in IMG/M
3300025981|Ga0207640_11246029Not Available663Open in IMG/M
3300026023|Ga0207677_10134969All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae1880Open in IMG/M
3300026035|Ga0207703_10355098All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Parafilimonas → Parafilimonas terrae1350Open in IMG/M
3300026067|Ga0207678_10297840Not Available1386Open in IMG/M
3300026121|Ga0207683_10100864All Organisms → cellular organisms → Bacteria2577Open in IMG/M
3300026142|Ga0207698_10422784All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium1279Open in IMG/M
3300026807|Ga0207547_100077All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium1839Open in IMG/M
3300027775|Ga0209177_10010324All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2073Open in IMG/M
3300028380|Ga0268265_10507977All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300028380|Ga0268265_11886495All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300031716|Ga0310813_10480570All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300032180|Ga0307471_103224614Not Available578Open in IMG/M
3300033412|Ga0310810_10020589All Organisms → cellular organisms → Bacteria7948Open in IMG/M
3300033412|Ga0310810_11035400All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300033475|Ga0310811_10225184All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2255Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere12.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.50%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.33%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.50%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.50%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.50%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.67%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.67%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.67%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.83%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002099Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDAEnvironmentalOpen in IMG/M
3300002100Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDAEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026807Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0898.000033802162886013Switchgrass RhizosphereVNKFALKQSFFLPKFSETFISRSMGKKEKNTIAAKATKLLRASTSPELLTKPVSVSVTPLKQEPDKQEIDFYSKPIFKSRRFDLF
deepsgr_009412802199352025SoilTIAAKAKKPLNAITSPELLAKPVSASVTPLKQEHDKPETDFYSKPIFRSRRFDLF
F14TC_10196667523300000559SoilMGKKEKNTIAAKAKKVLNTSTSPELLTKPVSVSVAPLKQEPGKEEIDFYSKPIFRSRRFDLF*
JGI1027J11758_1300625123300000789SoilFAKFSETFISRLMGKKEKNTIAAKAKKSLSASTLPELLTTPVSLSVTPLKQEPGKPDTDFYSKPIFRSRRFDLF*
JGI11615J12901_1010332123300000953SoilMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSVSVTPLKQEPDKQEIDFYSKPIFKSRRFDLF*
F14TB_10244988113300001431SoilMGKKEKNIIAVKAKKSLTTSTSPELLTKPVSSSVAPLKQEPDKQETDFYSKPISDQGDLIYFK
JGI24808J26613_100450923300002099SoilVNKFAFKQSFFLPKFSETFISRSMGKKEKNTIAVKAKKLLNTSTSPELLTKPVSVSVTPLKQEPDKQEIDFYSKPIFKSRRFDLF*
JGI24809J26612_100405753300002100SoilMGKKEKNTIAAKAKKLLNTSVSPELLTKPVSVSVTPLKQEIDEQENRFLFKEPIFRSRRFDLF*
Ga0062593_10030756423300004114SoilMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF*
Ga0062593_10092834423300004114SoilMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0062593_10092841323300004114SoilMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF*
Ga0062593_10280841713300004114SoilMGKKEKNIIAVKVKKPLNASTSPELLTKPVSSSVTPVRQETDKLETDFYSKPIFKSRRFDLF*
Ga0063356_10000536643300004463Arabidopsis Thaliana RhizosphereMGKKEKNNIAAKAKKSLNTSTSPELLTKPVSSSVSPLKHETDKQETDFYPKPIFKSRRFDLF*
Ga0065705_1067438423300005294Switchgrass RhizosphereMGKKEKNTIAAKATKLLSASTSPELLTKPVSVSVAPLKQEPDKQEIDFYLKPIFKSRRFDLF*
Ga0070658_1104130913300005327Corn RhizosphereNMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0070676_1147254913300005328Miscanthus RhizosphereRLMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF*
Ga0070683_10100673313300005329Corn RhizosphereMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF*
Ga0070690_10047990013300005330Switchgrass RhizosphereTFISRLMGKKEKNTIAVKAKKSFNTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF*
Ga0070690_10137852823300005330Switchgrass RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0070670_10083001223300005331Switchgrass RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0068869_10045205223300005334Miscanthus RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0070666_1017164513300005335Switchgrass RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETD
Ga0070682_10149523813300005337Corn RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETGFYSKPIF
Ga0070661_10165557113300005344Corn RhizosphereMILFAKFSETFISRRMGKKEKNNIAAKAKKSLNASTSPELLTKPVSSSVIPLKQEPGTPETDFYSKPIFRSRRFDLF*
Ga0070692_1130295613300005345Corn, Switchgrass And Miscanthus RhizosphereMGKKEKNTIAVKAKKSFNTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF*
Ga0070675_10051374123300005354Miscanthus RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKLETDFYSKPIFKSRRFDLF*
Ga0070673_10100154533300005364Switchgrass RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPLKQEIDKLETDFYSKPIFKSRRFDLF*
Ga0070659_10117141513300005366Corn RhizosphereAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0070659_10126292423300005366Corn RhizosphereMGKKEKNTIAVKAKKSLTTSTSPELLTKPVSSSVAPLKQEPDKQETDFYSKPISDQGDLIYFKKDRIKQVN*
Ga0070663_10009195043300005455Corn RhizosphereMRKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF*
Ga0070663_10021672923300005455Corn RhizosphereVNKFTLQQLFFLPKFSETFISRRMGKKEKNTVAAKAKKLLNTSTSPELLTKPVSVSAAPLKQEPGNQETDFYSKPIFRSRRFDLF*
Ga0070678_10213062713300005456Miscanthus RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKKEIDKPETDFYSKPIFKSRRFDLF*
Ga0070662_10160282713300005457Corn RhizosphereKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0070681_1115126213300005458Corn RhizosphereSKFSETFISLSMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF*
Ga0070684_10032332323300005535Corn RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKLETDFYSKPIFKSRRFDLF*
Ga0070684_10071249513300005535Corn RhizosphereKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETGFYSKPIFRSRRFDLF
Ga0070672_10051703613300005543Miscanthus RhizosphereEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0070672_10169546813300005543Miscanthus RhizosphereFFLFKFSETFISRLMGKKEKNTIAVKAKKSFNTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF*
Ga0070686_10078662513300005544Switchgrass RhizosphereNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0070665_10102592923300005548Switchgrass RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLIKPVTASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0068857_10069718013300005577Corn RhizosphereDKQSFFLFKFSETFISRLMGKKEKNTIAVKAKKSFNTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF*
Ga0068854_10134133813300005578Corn RhizosphereTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0068852_10166842523300005616Corn RhizosphereMGKKEKNTIAAKARKVLNTSTSPELLTKPVSSSVNPVKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0068863_10029179513300005841Switchgrass RhizosphereMILFAKFSETFISRLMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF*
Ga0068862_10016629413300005844Switchgrass RhizosphereMGKKEKNTIAVKAEKLSNTSTSPELLKKPVSVSVVPLKQEPEKQEIDFYSKPIFKSRRFDLF*
Ga0066651_1069969123300006031SoilMGKKEKNTIAAKAKKSLNAATSPELLTKPESSSVTPLKLEPGKLETDFYSRPIFRSRRFDLF*
Ga0068871_10014319433300006358Miscanthus RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVTASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0075434_10206815813300006871Populus RhizosphereMGKKEKNTIAVKAKKSFNTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF
Ga0079219_1001291933300006954Agricultural SoilMGKKEKNTIAAKAKKSLNASTSPELLTKPVNPSVAPLKQEIDKLETEFYSKPIFRSRRFDLF*
Ga0105240_1195227813300009093Corn RhizosphereMGKKEKNTIAAKAKKLLDTSTSPELLIKPVSASVAPVKKEIDKPETDFYSKPIFKSRRFDLF*
Ga0105247_1056041313300009101Switchgrass RhizosphereKQSFFLFKFSETFISRLMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF*
Ga0105237_1181312313300009545Corn RhizosphereRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0105249_1115185923300009553Switchgrass RhizosphereMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRF
Ga0126382_1077588313300010047Tropical Forest SoilMGKEAKNTIAAKAKKVLNTSTSPELLTKPVSVSVAPLKQEPDKQEIDFYSKPIFKSRRFDLF*
Ga0126376_1284124413300010359Tropical Forest SoilKAKKLLNASTSPELLTKPVSASVTPLKQEPGKLETDFYSKPIFRSRRFDLF*
Ga0126372_1293770223300010360Tropical Forest SoilMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKEDTDFYSKPIFRSRRFDLF*
Ga0134124_1024166723300010397Terrestrial SoilMGKKEKNTIAAKAKKLLNPSTSPELLTKPVSSSVNPMKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0134122_1016350833300010400Terrestrial SoilMGKKEKNTIAAKAEKLSNTSTSPELLTTPVNSSVTPLKQEPVKQEIDFYPKPIFKSRRFDLF*
Ga0134123_1125139723300010403Terrestrial SoilMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSTSVTPLKEEPDKLETEFYSKPIFRSRRFDLF*
Ga0105246_1166789913300011119Miscanthus RhizosphereIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFRSRRFDLF*
Ga0150985_11772981013300012212Avena Fatua RhizosphereMGKKEKNTIAGKAKKSLNAATSAELLTKPVSSSVTPLKEEPVKLETDFYSKPIFRSRRFDLF*
Ga0150984_11791429923300012469Avena Fatua RhizosphereLMGKKEKNTIAAKAKKSLNAATSPELLTKPVSSSVTPLKLEPGKLETDFYSRPIFRSRRFDLF*
Ga0157349_104720613300012489Unplanted SoilSFFLFKFSETFISRLMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF*
Ga0126375_1032926623300012948Tropical Forest SoilMGKKEKNTIAAKAKKLLNTSTSSELLTKPASSSVIPLKQESDKQEVDFYSRPIFRSRRFDLF*
Ga0126375_1101855713300012948Tropical Forest SoilMGKKEKNTIAAKAKKLLNTSTSPELLVKPVSSSVTPLKQEADKQEVDFYLKPIFKSRRFDLF*
Ga0164298_1027265923300012955SoilMGKKEKNTIAAKAKKSLNSSTSPELLTKPVSSSVAPLKQEPGKQETDFYSKPIFRSRRFDLF*
Ga0164303_1008883113300012957SoilPVNKFTGNKPFFLLKFSETFISLSMGKKEKNTIAAKAKKALSASTSPELLTKPVSSSVTPLKHDDKPETDFYSKPIFRSRRFDLF*
Ga0164299_1019400223300012958SoilMGKKEKDTIAAKAKKSLSASTSPELLTTPISLSVTPLKQEPGKVDTDFYSKPIFRSRRFDLF*
Ga0164301_1032942223300012960SoilMGKKEKDIIAAKAKKSLSASTSPELLTKPVSSSVTPLKHDDKPETDFYSKPIFRSRRFDLF*
Ga0164305_1042319923300012989SoilISRLMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF*
Ga0157373_1153843613300013100Corn RhizosphereKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF*
Ga0157371_1145189713300013102Corn RhizosphereFKFSETFISRLMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF*
Ga0157378_1001828073300013297Miscanthus RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPVKQGTDKLETEFYSKPIFRSRRFDLF*
Ga0157377_1068933713300014745Miscanthus RhizosphereMGKKEKDTIAAKAKKSLSASTSPELLIKPVTASVAPVKQEIDKPETDFYSKPIFRSRRFDLF*
Ga0157376_1080774913300014969Miscanthus RhizosphereMGKKEKNNIAAKAKKSLNASTSPELLTKPVSSSVIPLKQEPGTPETDFYSKPIFRSRRFDLF*
Ga0157376_1216243213300014969Miscanthus RhizosphereNNIAAKAKKSLNASTSPELLTKPVSSSVIPLKQEPGTPETDFYSKPIFRSRRFDLF*
Ga0132258_1036302323300015371Arabidopsis RhizosphereVNKFILNQSFFLPKFSETFISRRMGKKEKNTVAAKAKKLLNTSTSPELLTKPVSVSAAPLKQEPGNQETDFYSKPIFRSRRFDLF*
Ga0132258_1065798633300015371Arabidopsis RhizosphereMGKKEKNTIADKAKKSSNASTPPELLTKPVVSSVAPLKQEPEKLELDLYPRPIFKSRRFDLF*
Ga0132255_10228288123300015374Arabidopsis RhizosphereMGKKEKNNIAAKGKKSLNASTSPELLTKPVSSSVTPLKQEAGTPEIDFYSKPIFRSRRFDLF*
Ga0163161_1107759623300017792Switchgrass RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF
Ga0182009_1046710913300021445SoilMGKKEKNTVAAKAKKSLNASTSPELLTKPVSSSVTPLKQEIDKLDVDFYSKPIFKSRRF
Ga0247786_101332633300022883SoilFSETFISLSMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF
Ga0207697_1046548123300025315Corn, Switchgrass And Miscanthus RhizosphereMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSR
Ga0207713_118578823300025735Switchgrass RhizosphereMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF
Ga0207688_1025779813300025901Corn, Switchgrass And Miscanthus RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPVKQGTDKLETEFYSKPIFRSRRFDLF
Ga0207680_1003302323300025903Switchgrass RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKLETDFYSKPIFKSRRFDLF
Ga0207680_1043772913300025903Switchgrass RhizosphereMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF
Ga0207647_1008179713300025904Corn RhizosphereMGKKEKNTIAVKAKKSLTTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF
Ga0207643_1043838523300025908Miscanthus RhizosphereKFSETFISRLMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF
Ga0207654_1082655413300025911Corn RhizosphereMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKP
Ga0207707_1092854113300025912Corn RhizosphereDKQSFFLFKFSETFISRLMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF
Ga0207657_1085354413300025919Corn RhizosphereMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSR
Ga0207649_1000219213300025920Corn RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF
Ga0207649_1079836723300025920Corn RhizosphereSDKQSFFLFKFSETFISRLMGKKEKNTIAVKAKKSLTTSTSPELLTKPVSSSVAPLKQEPDKQETDFYSKPIFRSRRFDLF
Ga0207649_1100779223300025920Corn RhizosphereMILFAKFSETFISRRMGKKEKNTVAAKAKKLLNTSTSPELLTKPVSVSAAPLKQESGKQETDFYSKPIFRSRRFDLF
Ga0207649_1160486423300025920Corn RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKS
Ga0207681_1084831523300025923Switchgrass RhizosphereLLKFSETFISRSMGKKEKNTIAVKAEKLSNTSTSPELLKKPVSVSVVPLKQEPEKQEIDFYSKPIFKSRRFDLF
Ga0207644_1023151313300025931Switchgrass RhizosphereMGKKEKDTIAAKAKKSLSASTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRF
Ga0207644_1137806513300025931Switchgrass RhizosphereKAKKSLNASTSPELLTKPVSSSVIPLKQEPGTPETDFYSKPIFRSRRFDLF
Ga0207706_1042907823300025933Corn RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETEFYSKPIFRSRRFDLF
Ga0207704_1126794423300025938Miscanthus RhizosphereMGKKEKNTIAAKARKVLNTSTSPELLTKPVSSSVNPVKQGTDKLETEFYSKPIFRSRRFDLF
Ga0207691_1063474223300025940Miscanthus RhizosphereMILFAKFSETFISRLMGKKEKNNIAAKAKKSLNASTSPELLTKPVSSSVNPMKQGTDKLETGFYSKPIFRSRRFDLF
Ga0207691_1130010523300025940Miscanthus RhizosphereFFLFKFSETFISRLMGKKEKNTIAVKAKKSFNTSTSPELLTKPVSSSVAPLKQEPGKQEADFYSKPIFRSRRFDLF
Ga0207711_1185013913300025941Switchgrass RhizosphereKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF
Ga0207679_1017167433300025945Corn RhizosphereAAKAKKSLNASTSPELLTKPVSSSVIPLKQEPGTPETDFYSKPIFRSRRFDLF
Ga0207640_1124602923300025981Corn RhizosphereTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYSKPIFKSRRFDLF
Ga0207677_1013496933300026023Miscanthus RhizosphereMNNLRKFSKTFISRSMGKKEKNTIAAKAKKLLNTSTSPELLIKPVSASVAPVKQEIDKPETDFYS
Ga0207703_1035509833300026035Switchgrass RhizosphereMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVTPLKQEPGKLETDFYSKPIFRSRRFDLF
Ga0207678_1029784013300026067Corn RhizosphereVNKFTSQQSFFLPKFSETFISRRMGKKEKNTVAAKAKKLLNTSTSPELLTKPVSVSAAPLKQEPGNQETDFYSKPIFRSRRFDLF
Ga0207683_1010086433300026121Miscanthus RhizosphereMGKKEKDTIAAKAKKPLNAITSPELLTKPVSSSVTPLKHDDKPETDFYSKPIFRSRRFDL
Ga0207698_1042278423300026142Corn RhizosphereLFKFSETFISRLMGKKEKNTIAVKAKKLLNTSASPELLTKPISPSVAPLKQELDKQETDFYSRPIFKSRRFDLF
Ga0207547_10007733300026807SoilMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKP
Ga0209177_1001032433300027775Agricultural SoilMGKKEKNTIAAKAKKSLNASTSPELLTKPVNPSVAPLKQEIDKLETEFYSKPIFRSRRFDLF
Ga0268265_1050797723300028380Switchgrass RhizosphereRNMGKKEKNTIAAKAKKLLNTSTSPELLTKPVSSSVNPMKQGTDKLETGFYSKPIFRSRRFDLF
Ga0268265_1188649523300028380Switchgrass RhizosphereMGKKEKNTIAVKAEKLSNTSTSPELLKKPVSVSVVPLKQEPEKQEIDFYSKPIFKSRRFDLF
Ga0310813_1048057023300031716SoilKKEKNIIAVKVKKPLNASTSPELLTKPVSSSVTPVRQETDKLETDFYSKPIFKSRRFDLF
Ga0307471_10322461423300032180Hardwood Forest SoilFFLFKFSETFISRLMGKKEKNTIAVKAKKSLTTSTSPELLTKPVSSSVAPLKQEPDKQETDFYSKPIFRSRRFDLF
Ga0310810_1002058913300033412SoilNTIAAKAKKLLNTSTSPELLTKPVSASVTPLKQEPGKPETDFYSKPIFRSRRFDLF
Ga0310810_1103540013300033412SoilMGKKEKNIIAVKVKKPLNASTSPELLTKPVSSSVTPVRQETDKLETDFYSKPIFKSRRFDLF
Ga0310811_1022518433300033475SoilMGKKEKNTVKVKKPLNASTSPELLTKPVSSSVTPVRQETDKLETDFYSKPIFKSRRFDLF

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Bioinformatics & Integrated Biology Lab
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Biomedical Sciences Research Center "Alexander Fleming"
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