Metagenome / Metatranscriptome Family F073634

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073634
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	93 residues
Representative Sequence	MQESGWTYLSEEFIEDLERALSGGQTVSSVLQSYGINRGTYYSWLAIGEGRMTRWRDGTPISEDMRTNCRRLAKRVLRAREAALRAKRQALR
Number of Associated Samples	87
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.00 %
% of genes near scaffold ends (potentially truncated)	35.83 %
% of genes from short scaffolds (< 2000 bps)	89.17 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.167 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 1.67% Coil/Unstructured: 48.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.152.1.1: AhpD	d1knca_	1knc	0.6018
d.110.2.0: automated matches	d3zq5a3	3zq5	0.59797
d.133.1.1: Molybdenum cofactor-binding domain	d3nvvc2	3nvv	0.58596
d.110.2.1: GAF domain	d2oola1	2ool	0.58432
f.19.1.0: automated matches	d3c02a_	3c02	0.58025

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02779	Transket_pyr	15.83
PF00873	ACR_tran	9.17
PF02780	Transketolase_C	5.83
PF00486	Trans_reg_C	3.33
PF04199	Cyclase	2.50
PF13193	AMP-binding_C	1.67
PF04250	DUF429	1.67
PF02518	HATPase_c	1.67
PF13518	HTH_28	0.83
PF12681	Glyoxalase_2	0.83
PF16576	HlyD_D23	0.83
PF02786	CPSase_L_D2	0.83
PF08299	Bac_DnaA_C	0.83
PF00005	ABC_tran	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.50
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	1.67
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.33 %
Unclassified	root	N/A	1.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.33 %
Unclassified	root	N/A	1.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.33 %
Unclassified	root	N/A	1.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.17 %
Unclassified	root	N/A	1.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	75.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.17 %
Unclassified	root	N/A	1.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	75.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.33 %
Unclassified	root	N/A	1.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	75.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Unclassified	root	N/A	1.67 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	75.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Unclassified	root	N/A	1.67 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	75.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Unclassified	root	N/A	1.67 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	75.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Unclassified	root	N/A	1.67 %
Frankia elaeagni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001536\|A1565W1_11085662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300004081\|Ga0063454_100948942	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300004081\|Ga0063454_101616481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	560	Open in IMG/M
3300004463\|Ga0063356_100586359	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300004633\|Ga0066395_10357274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M
3300005093\|Ga0062594_102682951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300005172\|Ga0066683_10521727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300005176\|Ga0066679_10839784	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005177\|Ga0066690_10178957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1405	Open in IMG/M
3300005177\|Ga0066690_10450120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	871	Open in IMG/M
3300005179\|Ga0066684_10378029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300005187\|Ga0066675_11208035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300005332\|Ga0066388_102316599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	972	Open in IMG/M
3300005435\|Ga0070714_101209459	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005435\|Ga0070714_101519339	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005436\|Ga0070713_100887588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300005437\|Ga0070710_11476150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300005447\|Ga0066689_10279736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1032	Open in IMG/M
3300005447\|Ga0066689_10679491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	645	Open in IMG/M
3300005467\|Ga0070706_100096531	All Organisms → cellular organisms → Bacteria	2744	Open in IMG/M
3300005467\|Ga0070706_100248980	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300005467\|Ga0070706_100310479	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300005467\|Ga0070706_101122984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300005468\|Ga0070707_101262182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300005471\|Ga0070698_100980579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	792	Open in IMG/M
3300005534\|Ga0070735_10311211	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005536\|Ga0070697_101633971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300005537\|Ga0070730_10013036	All Organisms → cellular organisms → Bacteria	6714	Open in IMG/M
3300005537\|Ga0070730_10069037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2498	Open in IMG/M
3300005537\|Ga0070730_10079873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2293	Open in IMG/M
3300005542\|Ga0070732_10007157	All Organisms → cellular organisms → Bacteria	6072	Open in IMG/M
3300005542\|Ga0070732_10049596	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300005546\|Ga0070696_101435454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	589	Open in IMG/M
3300005561\|Ga0066699_10978074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300005575\|Ga0066702_10928483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300005578\|Ga0068854_101070958	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005764\|Ga0066903_100500407	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300005764\|Ga0066903_103469681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300005993\|Ga0080027_10416325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300006032\|Ga0066696_10087482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1844	Open in IMG/M
3300006354\|Ga0075021_11099957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300006800\|Ga0066660_10192596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1548	Open in IMG/M
3300006914\|Ga0075436_101289376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300009012\|Ga0066710_101475912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1051	Open in IMG/M
3300009038\|Ga0099829_11044536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300009088\|Ga0099830_10475427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1017	Open in IMG/M
3300009089\|Ga0099828_11321771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300009089\|Ga0099828_11322698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300009090\|Ga0099827_10192434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1693	Open in IMG/M
3300009090\|Ga0099827_10558261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	986	Open in IMG/M
3300009090\|Ga0099827_10763577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300009137\|Ga0066709_101299514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300009137\|Ga0066709_102517866	Not Available	693	Open in IMG/M
3300009137\|Ga0066709_104521081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300009156\|Ga0111538_11807418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	769	Open in IMG/M
3300010166\|Ga0126306_10913638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300011270\|Ga0137391_10166819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1919	Open in IMG/M
3300011270\|Ga0137391_11365625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300011998\|Ga0120114_1082000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
3300012014\|Ga0120159_1162493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300012096\|Ga0137389_11188525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300012096\|Ga0137389_11200350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
3300012189\|Ga0137388_11763669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300012203\|Ga0137399_10715121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300012203\|Ga0137399_11105508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300012204\|Ga0137374_10386038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1118	Open in IMG/M
3300012206\|Ga0137380_11147802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300012209\|Ga0137379_10536344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1078	Open in IMG/M
3300012211\|Ga0137377_11577772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300012212\|Ga0150985_114041635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300012212\|Ga0150985_115013845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1018	Open in IMG/M
3300012212\|Ga0150985_115754111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300012349\|Ga0137387_10421132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	969	Open in IMG/M
3300012350\|Ga0137372_10914381	Not Available	620	Open in IMG/M
3300012354\|Ga0137366_11105662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300012356\|Ga0137371_10557554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	882	Open in IMG/M
3300012357\|Ga0137384_10081664	All Organisms → cellular organisms → Bacteria	2687	Open in IMG/M
3300012359\|Ga0137385_11223670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300012363\|Ga0137390_10321278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1529	Open in IMG/M
3300012363\|Ga0137390_11222901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	698	Open in IMG/M
3300012469\|Ga0150984_104100358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300012917\|Ga0137395_10428264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	949	Open in IMG/M
3300012918\|Ga0137396_10847076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300013772\|Ga0120158_10090345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1882	Open in IMG/M
3300013772\|Ga0120158_10113060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1595	Open in IMG/M
3300013772\|Ga0120158_10284690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	808	Open in IMG/M
3300014326\|Ga0157380_12630148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300014497\|Ga0182008_10370608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300015371\|Ga0132258_10603229	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300015372\|Ga0132256_102547221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300018433\|Ga0066667_10132056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1727	Open in IMG/M
3300018433\|Ga0066667_10501506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1000	Open in IMG/M
3300018468\|Ga0066662_11028985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	817	Open in IMG/M
3300021358\|Ga0213873_10136769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300021362\|Ga0213882_10188607	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300021374\|Ga0213881_10416984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300021377\|Ga0213874_10376483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300021384\|Ga0213876_10085260	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300021384\|Ga0213876_10185150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1107	Open in IMG/M
3300021388\|Ga0213875_10451886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300021861\|Ga0213853_11017280	All Organisms → cellular organisms → Bacteria	4114	Open in IMG/M
3300022756\|Ga0222622_11053571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300025910\|Ga0207684_10683317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	873	Open in IMG/M
3300025910\|Ga0207684_10878525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	755	Open in IMG/M
3300025922\|Ga0207646_10945386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300025922\|Ga0207646_11077114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300025961\|Ga0207712_11864475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300027842\|Ga0209580_10004623	All Organisms → cellular organisms → Bacteria	5866	Open in IMG/M
3300027842\|Ga0209580_10113653	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300027842\|Ga0209580_10161887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1103	Open in IMG/M
3300027857\|Ga0209166_10014618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5002	Open in IMG/M
3300027857\|Ga0209166_10060111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2187	Open in IMG/M
3300027857\|Ga0209166_10098371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1635	Open in IMG/M
3300027857\|Ga0209166_10101458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1605	Open in IMG/M
3300027874\|Ga0209465_10431880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300027986\|Ga0209168_10408882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300028047\|Ga0209526_10351231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300028536\|Ga0137415_10682403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	840	Open in IMG/M
3300031747\|Ga0318502_10925539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300032261\|Ga0306920_103507335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.00%
Host-Associated	Host-Associated	15.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.50%
Plants	Host-Associated → Plants	15.00%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Roots	Host-Associated → Plants → Roots	3.33%
Sediment	Environmental → Aquatic → Sediment	1.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	11.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.17%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	3.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.67%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A1565W1_110856621	3300001536	Permafrost	MAKSVENAEKSTHESGWTYLSEEFIEDLERAIVVGHTVSSVLHQYGINRGTYYSWLAIGEGRMQRWRDGTPISLDMHTNCLRLFKRVLRAREARLSAKRQALR*
Ga0063454_1009489421	3300004081	Soil	ERAITEGGTISSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISSDMRTNCKRLYKRVLRAREANLRTKRQALR*
Ga0063454_1016164812	3300004081	Soil	VTSDSGWTYLSEEFIGDLERAIAQGETISSVLQAYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREARLRAK
Ga0063356_1005863592	3300004463	Arabidopsis Thaliana Rhizosphere	VQESGWTYLSEGFIQDLERAISEGLTISSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISSDMRTNCKRLYKRVLRAREANLRTKRQALR*
Ga0066395_103572742	3300004633	Tropical Forest Soil	VTNESGWTYLSEEFVEDLERAVAEGQTVSSVLQTYGINRGTYYSWLAIGEGHMSQWRDGTPISEDMRTNCRRLARRVLRAREARLKARRQALR*
Ga0062594_1026829511	3300005093	Soil	MGTLSLRAVHDSGWTYLSEPFIQDLENAVGGGKTVTSVLTEYGINRGTYYSWLAIGEGRMTQWRDGTPISADMRTNCRRLYKRVLRAREAALRAKRQ
Ga0066683_105217272	3300005172	Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISEDMQTNCRRLAKRVLRARETRFRAKRRSLR*
Ga0066679_108397842	3300005176	Soil	MAQESGWTYLSEEFIEDLERTLSGGQTVASVLRAYGINRGTYYSWLAIGEGRMTSWRDGTPISEDMRTNCRRLAKRVLRAREVALRSKRAALR*
Ga0066690_101789572	3300005177	Soil	MPESGWTYLSEEFIEDLERAISQGKTISSVLQEYGINRGTYYSWLAIGEGRMTRWRDGTPISEEMRTNCLRLARRVLRAREARLRTRRQTLR*
Ga0066690_104501202	3300005177	Soil	VTSDSGWTYLSEEFIEDLERAIAQGETISSVLQAYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREARLRAKRQALR*
Ga0066684_103780291	3300005179	Soil	VTSESGWTYLSDEFIQDLERAIAQGETISSVLQVYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREARLRAKRQALR*
Ga0066675_112080351	3300005187	Soil	VTSDSGWTYLSEEFIEDLERAIAQGETISSVLQVYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREARLRAKRQALR*
Ga0066388_1023165992	3300005332	Tropical Forest Soil	AAMQESGWTYLSEEFIEDLERAITGGQTVSSVLLTYGINRGTYYSWLAIGEGRMTHWRDGTPVSEDMRTNCRRLARRVLRAREAAIRARRQALR*
Ga0070714_1012094591	3300005435	Agricultural Soil	MQESGWTYLSEEFIEDLERALSSGQTVSSVLRTYGINRGTYYSWLAIGEGRMLAWRDGTPISRDMRTNCLRLFKRVLRA
Ga0070714_1015193391	3300005435	Agricultural Soil	ASVLLYVAPMQESGWTYLSEEFIEDLERAVSGGQTVTSVLRTYGINRGTYYSWLAIGEGRMTTWRDGTPVSEDMRTNCRRLTRRILRAREAALRAKRQALR*
Ga0070713_1008875882	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQESGWTYLSEEFIEDLERAITGGQTVSSVLQTYGINRGTYYSWLAIGEGRMTQWRDGTPVSEDMRTNCRRLTRRVLRAREAALRAKRQALR*
Ga0070710_114761502	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQESGWTYLSEEFIEDLERAISSGQTVSSVLSTYGINRGTYYSWLAIGDGRMTTWRDGTPVSADMRTNCRRLTRRVLRAREAALRAKRQALR*
Ga0066689_102797362	3300005447	Soil	IEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRQSLR*
Ga0066689_106794911	3300005447	Soil	VTNEGGWTYLSEEFVEDLERAIVEGRTVGSVLQPYGINRGTYYSWLAIGDGRMSQWRDGTPISEDMRTNCRRLARRVLRAREARLKAKRQALR*
Ga0070706_1000965312	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMSEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR*
Ga0070706_1002489802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SEEFIEDLERAIADGHTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISEDMQTNCLRLAKRVLRAREARFRSRRRSLR*
Ga0070706_1003104792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHDSGWTYLSEEFIEDLERAIAEGRTIVSVLQEYGINRGTYYSWLAIGEGRMTTWRDGTPISGDMQTNCLRLAKRVLRARETRFRSRRRSLS*
Ga0070706_1011229841	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQQESGWTYLSEEFIGDLERALTAGQTVSSVLQSYGINRGTYYAWLAIGEGRMARWRDGTPISEDMRTNCRRLAKRVLRAREAALRAKRQALR*
Ga0070707_1012621822	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YLSEEFIEDLERAIAEGRTIVSVLQEYGINRGTYYSWLAIGEGRMTTWRDGTPISGDMQTNCLRMAKRVLRARETRFRSRRRSLS*
Ga0070698_1009805792	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVLRARETRFRAKRRSLR*
Ga0070735_103112112	3300005534	Surface Soil	MQDSGWTYLSEEFIEDLERALSAGKTVTSVLQSYGINRGTYYSWLAIGEGRMTRWRDGAPISEDMRTNCKRLAKRVLRAREAALRTKRQALR*
Ga0070697_1016339711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MHDSGWTYLSEEFIEDLERAIADGHTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISEDMQTNCLRLAKRVLRA
Ga0070730_100130364	3300005537	Surface Soil	MQESGWTYLSEEFIEDLERAVSGGQTVTSVLRTYGINRGTYYAWLAIGEGRMTTWRDGTPVSEDMRTNCRRLTRRVLRAREAALRAKRQALR*
Ga0070730_100690373	3300005537	Surface Soil	MSRLGTLYGTMQDSGWTYLSEEFIEDLERAIGEGRTITSVLQEYGINRGTYYSWLAIGEGRMARWRDGTPISDDMQTNCLRLAKRVLRARETRFRSRRRSLR*
Ga0070730_100798732	3300005537	Surface Soil	VPDYGWTYLSEQFIEDLERAIAEGQTITSVLRDWGINRGTYYSWMAIGERRMTVWRDGTPVSADMRTNCVRLAKRILRARETRLRARRRSMA*
Ga0070732_100071573	3300005542	Surface Soil	VQESGWTYLSEEFIEDLERAISGGQTVSSVLQTYGINRGTYYSWLAIGEGRMTQWRDGTPISADMRTNCKRLTRRVLRAREAALRAKRQALR*
Ga0070732_100495962	3300005542	Surface Soil	MQESGWTYLSEEFIEDLERAVSGGQTVTSVLRTYGINRGTYYSWLAIGEGRMTRWRDGTPVSEDMRTNCRRLTRRVLRAREAALRAKRQALR*
Ga0070696_1014354541	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VQDSGWTYLSEDFIQDLERALSEGKTISGVLQEYGINRGTYYSWMAIGEGRMTHWRDGTPISADMRTNCRRLYKRVLRAREAALRTKRQAIH*
Ga0066699_109780742	3300005561	Soil	MQESGWTYLSEEFIEDLERALSGGQTVSSVLQSYGINRGTYYSWLAIGEGRMTRWRDGTPISEDMRTNCRRLAKRVLRAREAALRAKRQALR*
Ga0066702_109284832	3300005575	Soil	VTSESGWTYLSDEFIQDLERAIAQGETISSVLQVYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREAR
Ga0068854_1010709582	3300005578	Corn Rhizosphere	TCIVLYVRYTVCNVVHDSGWTYLTEEFIQDLERVIGQGETISALLKEYGINRGTYYSWLAIGEGRMARWRDGTPISADMRTNCLRLSKRVLRAREAHLRAKRQGLH*
Ga0066903_1005004072	3300005764	Tropical Forest Soil	MQESGWTYLSEEFIEDLERAIAGGQTVSSVLLMYRINRGTYYSWLAIGEGRMTHWRDGTPVSEDMRTNCKRLARRVLRVREAAIRAKRQALR*
Ga0066903_1034696812	3300005764	Tropical Forest Soil	MQESGWTYLSEEFIEDLEDAITSGQTVSSVLQMYGINRGTYYSWLAIGEGRMTQWRDGTPVSEDMRSNCKRLTRRVLRAREAALRAKRQALR*
Ga0080027_104163252	3300005993	Prmafrost Soil	DSGWTYLSEEFIEDLEGAIVGGHTVSSVLQQYGINRGTYYSWLAIGEGRMLRWRDGTPISEDMRTNCRRLFKRVLRAREGHLRAKRQALH*
Ga0066696_100874823	3300006032	Soil	VTSESGWTYLSDEFIEDLERAIAQGETISSVLQVYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREARLRAKRQALR*
Ga0075021_110999572	3300006354	Watersheds	CMQRARADVPDYGWTYLSEQFIEDLERAIAEGRTITSVLRDWGINRGTYYSWMAIGERRMTRWRDGTPVSADMRTNCLRLAKRILRARETRLRARRRSMN*
Ga0066660_101925962	3300006800	Soil	MPESGWTYLSEEFIEDLERAISQGKTISSVLQEYGINRGTYYSWLAIGEGRMTRWRDGTPISEEMRTNCLRLARRVLRARETRLRTRRQTLR*
Ga0075436_1012893762	3300006914	Populus Rhizosphere	MPESGWTYLSEEFIEDLERAISQGKTISSVLQEYGINRGTYYTWLAIGEGRMSRWRDGTPISEEMRTNCLRLARRVLRAREARLRTRRQTLH*
Ga0066710_1014759123	3300009012	Grasslands Soil	TNEGGWTYLSEEFVEDLERAMVEGRTIGSVLQTYGINRGTYYSWLAIGDGRMSQWRDGTPISEDMRTNCRRLARRVLRAREARLKAKRQALR
Ga0099829_110445362	3300009038	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCKRLAKRVLRARETRFRAKRRSLR*
Ga0099830_104754272	3300009088	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIADGHTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISEDMQTNCLRLAKRVLRAREARFRSRRRSLR*
Ga0099828_113217712	3300009089	Vadose Zone Soil	MQQPGTQQRMHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMSEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR*
Ga0099828_113226982	3300009089	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIADGHTIVSVLQEYGINRGTYYSWLAIGEGRMTQWRDGTPISEDMQTNCLRLAKRVLRAREARFRSRRRSLR*
Ga0099827_101924342	3300009090	Vadose Zone Soil	MQESGWTYLSEEFIEDLERAIAGSKTISSILQEYGINRGTYYSWLAIGEGRMTSWRDGTPISHDMRTNCRRLFKRVLRARETALRAKRQALR*
Ga0099827_105582611	3300009090	Vadose Zone Soil	GGWTYLSEEFVEDLERAIVEGRTIGSVLQTYGINRGTYYSWLAIGDGRMRQWRDGTPISEDMRTNCRRLARRVLRAREARLKAKRQALR*
Ga0099827_107635771	3300009090	Vadose Zone Soil	MVRIGSVHCMQQPQTAAMHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISEDMQTNCRRLAKRVLRARETRFRAKRRSLR*
Ga0066709_1012995142	3300009137	Grasslands Soil	MQDSGWTYLSEEFIEDLERAIAGSKTISSVLQEYGINRGTYYSWLAIGEGSMTSWRDGTPISPDMRTNCRRLFKRVLRARETALRTKRQALR*
Ga0066709_1025178662	3300009137	Grasslands Soil	VARTTASAAKNPHESGWTYLSEEFIEDLEGAIGVGHTVSSVLHQYGINRATYYSWVAIGQGRMQRWRDGAAISADMRANCRRLSRRVLRAREA
Ga0066709_1045210812	3300009137	Grasslands Soil	MQESGWTYLSEEFIEDLERALSSGQTVSSVLQSYGINRGTYYSWLAIGEGRMTRWRDGTPISEDMRTNCRRLAKRVLRAREAALRTKRQALR*
Ga0111538_118074182	3300009156	Populus Rhizosphere	VHDSGWTYLSEGFIQDLERAVTEGLTVTSVLEEYGLNRSTYYSWLAIGEGRMTRWRDGTPISADMRTNCRRLYTRVLRAREANLRTKRQAL
Ga0126306_109136382	3300010166	Serpentine Soil	VLESGWTYLSEEFIQDLERAIVASETVSSVLQEYGINRGTYYSWLAIGEGRMSHWRDGTPISSEMRTNCRRLYKRVLKAREAQLRAKRQALR*
Ga0137391_101668191	3300011270	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIISVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCKRLAKRVLRARETRFRSRRRSLR*
Ga0137391_113656251	3300011270	Vadose Zone Soil	MQQESGWTYLSEEFIEDLERALTAGQTVSSVLQSYGINRGTYYAWLAIGEGRMARWRDGTPISEDMRTNCRRLARRVLRAREAALRAKRQALR*
Ga0120114_10820001	3300011998	Permafrost	MAKSVENAEKNPHESGWTYLSEEFIEDLERAIVVGHTVSSVLHQYGINRGTYYSWLAIGEGRMQRWRDGTPISVDMHTNCLRLFKRVLRAREARLRAKRQALR*
Ga0120159_11624931	3300012014	Permafrost	MAKSVENAEKSTHESGWTYLSEEFIEDLERAIVVGHTVSSVLHQYGINRGTYYSWLAIGEGRMQRWRDGTPISLDMHTNCLRLFKRVLRAREARLRAKRQALR*
Ga0137389_111885252	3300012096	Vadose Zone Soil	MQQPGTQQRMHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVL
Ga0137389_112003502	3300012096	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCKRLAKRVLRARETRFRSRRRSLR*
Ga0137388_117636692	3300012189	Vadose Zone Soil	MAKSAANVEKNLHDSGWTYLSEEFIEDLEGAIVAGQTVSSVLHQYGINRGTYYSWLAIGEGRMVRWRDGTPISVDMRTNCLRLFKRILRAREGRLRAKRQALS*
Ga0137399_107151212	3300012203	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMIEWRDGTPISADMQTNCKRLAKRVLRARETRFRSRRRSLR*
Ga0137399_111055081	3300012203	Vadose Zone Soil	MQQPGTQQRMHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR*
Ga0137374_103860382	3300012204	Vadose Zone Soil	VSDAVQDSGWTYLSEDFIQDLERALELGSTVSSVLTEYGINRGTYYSWMAIGEGRMTHWRDGTPISADMRTNCRRLYKRVLRAREAALRSKRQALR*
Ga0137380_111478021	3300012206	Vadose Zone Soil	MQDSGWTYLSEEFIADLERALIAGKTVSSVLQAYGINRGTYYSWLSIGEGRMTRWRDGAPISEDMQTNCRRLAKRVLRAREAALRAKRQALR*
Ga0137379_105363443	3300012209	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVLRARETRFRAKRRSLR*
Ga0137377_115777721	3300012211	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAITEGKTIISVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCKRLAKRVLRARETRFRAKRRSLR*
Ga0150985_1140416351	3300012212	Avena Fatua Rhizosphere	VQESGWTYLSEGFIQDLERVITEGGTISSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISADMRTNCRRLYKRVLRAREANLRTKRQALR*
Ga0150985_1150138452	3300012212	Avena Fatua Rhizosphere	VQESGWTYLSEGFIQDLERAITEGGTISSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISSDMRTNCKRLYKRVLRAREANLRTKRQALR*
Ga0150985_1157541111	3300012212	Avena Fatua Rhizosphere	MQESGWTYLSEEFIEDLERAISSGQTVSSVLSTYGINRGTYYSWLAIGDGRMTRWRDGTPVSVDMRTNCRRLTRRVLRAREAALRAKRQALR*
Ga0137387_104211322	3300012349	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTQWRDGTPISEDMQTNCRRLAKRVLRARETRFRAKRRSLR*
Ga0137372_109143811	3300012350	Vadose Zone Soil	LERAIGDNATIASVLRGYGINRGTYYSWLAIGEGRMTHWRDGTPISEDMRTNCRRLSRRVLRAREAQLRAKRQALR*
Ga0137366_111056621	3300012354	Vadose Zone Soil	VSDAVQDSGWTYLSEDFIQDLERAIELGSTVSSVLTEYGINRGTYYSWMAIGEGRMTHWRDGTPISADMRTNCRRLYKRVLRAREAALRSKRQALR*
Ga0137371_105575541	3300012356	Vadose Zone Soil	VTNEGGWTYLSEEFVEDLERAIVEGRTVGSVLQTYGINRGTYYSWLAIGDGRMSQWRDGTPISEDMRTNCRRLARRVLRAREARLKEKRQALR*
Ga0137384_100816641	3300012357	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAECKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCKRLAKRVLRARETRFRAKRRSLR*
Ga0137385_112236701	3300012359	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMSEWRDGTPISADMQTNCKRLAKRVLRARETRFRAKRRSLR*
Ga0137390_103212781	3300012363	Vadose Zone Soil	MTQESGWTYLSEEFIEDLERALTAGHTVSSVLQTYGINRGTYYSWLAIGEGRMNSWRDGTPISEDMRTNCRRLAKRVLRAREAALRAKRQSLR*
Ga0137390_112229012	3300012363	Vadose Zone Soil	MQDSGWTYLSEEFIEDLERAIAERQTVSSVLQVYGINRGTYYSWLSIGEGRMTRWRDGTPVSQDMRTNCRRLYKRLLRAREAALRVRRQALS*
Ga0150984_1041003582	3300012469	Avena Fatua Rhizosphere	QESGWTYLSEGFIQDLERAITEGGTISSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISSDMRTNCKRLYKRVLRAREANLRTKRQALR*
Ga0137395_104282642	3300012917	Vadose Zone Soil	LSEEFIEDLERAIAGSKTISSILQEYGINRGTYYSWLAIGEGRMTSWRDGTPISADMQTNCLRLAKRVLRARETRFRVKRRSLR*
Ga0137396_108470762	3300012918	Vadose Zone Soil	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR*
Ga0120158_100903451	3300013772	Permafrost	MAKSVENAEKNPHESGWTYLSEEFIEDLERAIVVGHTVSSVLHQYGINRGTYYSWLAIGEGRMQRWRDGTPISLDMHTNCLRLFKRVLRAREARLRAKRQALR*
Ga0120158_101130602	3300013772	Permafrost	MAKSVANNVEKNLHDSGWTYLSEEFIEDLEGAIIAGQTVSSVLHQYGINRGTYYSWLAIGEGRMLRWRDGTPISVDMRTNCLRLFKRILRAREGRLRAKRQALR*
Ga0120158_102846901	3300013772	Permafrost	MAKAMNESGWTYLSEEFIGDLEQAIGEGRTITSVLQEYGINRGTYYSWLAIGEGRMSSWRDGTPISEDMQTNCLRLAKRVLRARETRFRSRRRSLR*
Ga0157380_126301481	3300014326	Switchgrass Rhizosphere	VQGAVQEGRWTYLSEGFIQDLERAITEGGTISSVLQEYDLNRSTYYSWLAIGEGRMTHWRDGTPISADMRTNCKQLYRRVLRAR
Ga0182008_103706082	3300014497	Rhizosphere	MTTQESGWTYLSEDFIQDLERAIAAGSTITSVLQEYGINRGTYYSWLAIGEGRMTNWRDGTPISADMRTNCRRLYKRVLQAKEANLRAKRQAL*
Ga0132258_106032293	3300015371	Arabidopsis Rhizosphere	VHDSGWTYLSEGFIQDLERAITEGLTVTSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISADMRTNCRRLYTRVLRAREANLRTKRQALH*
Ga0132256_1025472212	3300015372	Arabidopsis Rhizosphere	VHDSGWTYLSEGFIQDLERAITEGLTVTSVLEEYGLNRSTYYSWLAIGEGRMTHWRDGTPISADMRTNCRRLYARVLRAREANLRTKRQALH*
Ga0066667_101320562	3300018433	Grasslands Soil	MPESGWTYLSEEFIEDLERAISQGKTISSVLQEYGINRGTYYSWLAIGEGRMTRWRDGTPISEEMRTNCLRLARRVLRAREARLRTRRQTLR
Ga0066667_105015062	3300018433	Grasslands Soil	VTSESGWTYLSDEFIEDLERAIAQGETISSVLQVYGINRGTYYSWLAIGEGRMRQWRDGTPISEDMRTNCLRLARRVFRAREARLRAKRQALR
Ga0066662_110289852	3300018468	Grasslands Soil	MQESGWTYLSEEFIEDLERAIARGETVSSVLRTYGINRGTYYSWLAIGDGRMSSWRDGTPVSQDMKTNCRRLTRRVLRAREAALRAKRKALR
Ga0213873_101367691	3300021358	Rhizosphere	MQESGWTYLSEEFIEDLERAIVAGRTVSSVLKEYGINRGTYYSWLAIGEGRMTHWRDGTPVSRDMRTNCRRLYARVLRARETALWAKRQALS
Ga0213882_101886072	3300021362	Exposed Rock	MQESGWTYLSEEFIEDLERAISGGQTIASVLRTYGINRGTYYSWLAIGEGRMSQWRDGTPVSSDMRTNCRRLTRRVLRAREAALRAKRQALR
Ga0213881_104169842	3300021374	Exposed Rock	ERAISGGQTIASVLRTYGINRGTYYSWLAIGEGRMSQWRDGTPVSSDMRTNCRRLTRRVLRAREAALRAKRQALR
Ga0213874_103764832	3300021377	Plant Roots	AVQESGWTYLSEEFIEDLERAISSGQTVSSVLQTYGINRGTYYAWLAIGEGRMTRWRDGTPVSADMRTNCRRLARRVLRAREVALKARRQALR
Ga0213876_100852603	3300021384	Plant Roots	MQESGWTYLSEEFIEDLERAIVAGRTVSSVLKEYGINRGTYYSWLAIGEGRMTHWRDGTPVSRDMRTNCRRLYARVLRARETALWAKR
Ga0213876_101851501	3300021384	Plant Roots	VWTYLSEEFIGYLERAISGGQTVASVLRTYGINRGTYYSWLAIGEGRMTTWRDGTPVSADMRTNCKRLTRRVLRAREAALRTKRQALR
Ga0213875_104518861	3300021388	Plant Roots	MQESGWTYLSEEFIEDLERAISGGQTIASVLRTYGINRGTYYSWLAIGEGRMSQWRDGTPVSSDMRTNCRRLTRRVLRAREAALRAKRQA
Ga0213853_110172803	3300021861	Watersheds	MARSVGTADQNLPDSGWTYLSEEFIEDLEGAIVAGQTVSSVLHHYGINRGTYYSWLAIGEGRMLRWRDGTPISAEMRTNCLRLFKRVLRAREGHLRAKRQALR
Ga0222622_110535712	3300022756	Groundwater Sediment	MHDSGWTYLSEEFIEDLEHAIADGHTIVSVLQEYGINRGTYYSWLAIGEGRMTSWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR
Ga0207684_106833171	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TLYATNGQKPMHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMSEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR
Ga0207684_108785252	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQQESGWTYLSEEFIGDLERALTAGQTVSSVLQSYGINRGTYYAWLAIGEGRMARWRDGTPISEDMRTNCRRLAKRVLRAREAALRAKRQALR
Ga0207646_109453862	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMSEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR
Ga0207646_110771142	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YLSEEFIEDLERAIAEGRTIVSVLQEYGINRGTYYSWLAIGEGRMTTWRDGTPISGDMQTNCLRMAKRVLRARETRFRSRRRSLS
Ga0207712_118644752	3300025961	Switchgrass Rhizosphere	TRPVDGDDAHGRKLHCAVQGAVQESGWTYLSEGFIQDLERAISEGLTISSVLQEYGLNRSTYYSWLAIGEGRMTHWRDGTPISSDMRTNCKRLYKRVLRAREANLRTKRQALR
Ga0209580_100046233	3300027842	Surface Soil	VQESGWTYLSEEFIEDLERAISGGQTVSSVLQTYGINRGTYYSWLAIGEGRMTQWRDGTPISADMRTNCKRLTRRVLRAREAALRAKRQALR
Ga0209580_101136533	3300027842	Surface Soil	MQESGWTYLSEEFIEDLERAITAGQTVSSVLQTYGINRGTYYSWLAIGEGRMARWRDGTPVSEDMRTNCRRLTRRVL
Ga0209580_101618872	3300027842	Surface Soil	MQESGWTYLSEEFIEDLERAVSGGQTVTSVLRTYGINRGTYYSWLAIGEGRMTRWRDGTPVSEDMRTNCRRLTRRVLRAREAALRAKRQALR
Ga0209166_100146182	3300027857	Surface Soil	MAKSIPTVAKDLHESGWTYLSEEFIEDLEGAIVAGQTVSSVLHQYGINRGTYYSWLAIGEGRMLRWRDGTPISADMRTNCVRLFKRILRAREGRLRAKRQALH
Ga0209166_100601111	3300027857	Surface Soil	QESGWTYLSEEFIEDLERAVSGGQTVTSVLRTYGINRGTYYAWLAIGEGRMTTWRDGTPVSEDMRTNCRRLTRRVLRAREAALRAKRQALR
Ga0209166_100983712	3300027857	Surface Soil	MSRLGTLYGTMQDSGWTYLSEEFIEDLERAIGEGRTITSVLQEYGINRGTYYSWLAIGEGRMARWRDGTPISDDMQTNCLRLAKRVLRARETRFRSRRRSLR
Ga0209166_101014581	3300027857	Surface Soil	RAGAVPDYGWTYLSEQFIEDLERAIAEGQTITSVLRDWGINRGTYYSWMAIGERRMTVWRDGTPVSADMRTNCVRLAKRILRARETRLRARRRSMA
Ga0209465_104318801	3300027874	Tropical Forest Soil	VTNESGWTYLSEEFVEDLERAVAEGQTVSSVLQTYGINRGTYYSWLAIGEGHMSQWRDGTPISEDMRTNCRRLARRVLRAREARLKARRQALR
Ga0209168_104088822	3300027986	Surface Soil	MQDSGWTYLSEEFIEDLERALSAGKTVTSVLQSYGINRGTYYSWLAIGEGRMTRWRDGAPISEDMRTNCKRLAKRVLRAREAALRTKRQALR
Ga0209526_103512312	3300028047	Forest Soil	MHDSGWTYLSEEFIEDLERAIAEGRTIVSVLQEYGINRGTYYSWLAIGEGRMTSWRDGTPISEDMQTNCLRLAKRVLRARETRF
Ga0137415_106824031	3300028536	Vadose Zone Soil	MQQPDTQQRMHDSGWTYLSEEFIEDLERAIAEGKTIVSVLQEYGINRGTYYSWLAIGEGRMTEWRDGTPISADMQTNCLRLAKRVLRARETRFRSRRRSLR
Ga0318502_109255391	3300031747	Soil	MQESGWTYLSEEFIEDLEGAISGGQTVSSVLQTYGINRGTYYSWLAIGEGRMISWRDGTPVSDDMRTNCRRLTRRVLRAREAALRAKRRA
Ga0306920_1035073351	3300032261	Soil	MQESGWTYLSEEFIEDLERAISGGQTVSSVLRTYGINRGTYYSWLAIGEGRMTSWRDGTPVSNDMRTNCRRLTQRVLRAREAALR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073634

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences