Metagenome / Metatranscriptome Family F073702

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073702
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	83 residues
Representative Sequence	DGDPIFHQRFYQAVAISIPLIVLRLPPVRRWVVEQRALGRQWLVWLAVAPMAVFYLTAMAFIVNEEIFTGTMAITLHPPAD
Number of Associated Samples	88
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.86 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.667 % of family members)
Environment Ontology (ENVO)	Unclassified (32.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.30% β-sheet: 0.00% Coil/Unstructured: 36.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF08327	AHSA1	13.33
PF02687	FtsX	5.00
PF10099	RskA	4.17
PF00324	AA_permease	2.50
PF12840	HTH_20	2.50
PF00392	GntR	1.67
PF14572	Pribosyl_synth	0.83
PF03795	YCII	0.83
PF02126	PTE	0.83
PF00701	DHDPS	0.83
PF03633	Glyco_hydro_65C	0.83
PF01546	Peptidase_M20	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	2.50
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	2.50
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	2.50
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	2.50
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.67
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.83
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	0.83
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.00 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.00 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	77.50 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	69.17 %
Unclassified	root	N/A	13.33 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.33 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.17 %
Unclassified	root	N/A	13.33 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3.33 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.17 %
Unclassified	root	N/A	13.33 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	3.33 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.17 %
Unclassified	root	N/A	13.33 %
Mycolicibacterium conceptionense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium conceptionense	3.33 %
Actinomadura formosensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura formosensis	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101472983	Not Available	818	Open in IMG/M
3300005146\|Ga0066817_1007055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300005164\|Ga0066815_10100481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300005355\|Ga0070671_101523365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium conceptionense	592	Open in IMG/M
3300005437\|Ga0070710_10776235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300005537\|Ga0070730_11055631	Not Available	505	Open in IMG/M
3300005545\|Ga0070695_100782659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300005546\|Ga0070696_100980563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300005719\|Ga0068861_100617169	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300005764\|Ga0066903_100896098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1604	Open in IMG/M
3300005764\|Ga0066903_102673097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300005764\|Ga0066903_107798152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300005764\|Ga0066903_108850248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300006237\|Ga0097621_100199588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1736	Open in IMG/M
3300006358\|Ga0068871_100871966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300006804\|Ga0079221_10678214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300009100\|Ga0075418_12278379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300009176\|Ga0105242_11544577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300009176\|Ga0105242_12567249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium conceptionense	558	Open in IMG/M
3300009792\|Ga0126374_10582352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300009792\|Ga0126374_11268179	Not Available	594	Open in IMG/M
3300010043\|Ga0126380_10250529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1226	Open in IMG/M
3300010046\|Ga0126384_10891054	Not Available	803	Open in IMG/M
3300010046\|Ga0126384_11990652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium conceptionense	555	Open in IMG/M
3300010048\|Ga0126373_11906667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300010048\|Ga0126373_12495073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300010154\|Ga0127503_10922689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300010358\|Ga0126370_10652537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300010358\|Ga0126370_11431572	Not Available	654	Open in IMG/M
3300010360\|Ga0126372_10582874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300010360\|Ga0126372_10998343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300010360\|Ga0126372_11524002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300010361\|Ga0126378_11578419	Not Available	745	Open in IMG/M
3300010361\|Ga0126378_12423023	Not Available	599	Open in IMG/M
3300010366\|Ga0126379_10525248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1259	Open in IMG/M
3300010366\|Ga0126379_11688257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300010366\|Ga0126379_13007852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium conceptionense	564	Open in IMG/M
3300010366\|Ga0126379_13846254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300010376\|Ga0126381_102214840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300010397\|Ga0134124_12519714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300010398\|Ga0126383_10115804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2430	Open in IMG/M
3300010398\|Ga0126383_10559387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura formosensis	1210	Open in IMG/M
3300010398\|Ga0126383_10737118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1065	Open in IMG/M
3300010398\|Ga0126383_10851129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300010398\|Ga0126383_11968460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300010398\|Ga0126383_13459102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300012198\|Ga0137364_10638666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300012199\|Ga0137383_11063945	Not Available	587	Open in IMG/M
3300012200\|Ga0137382_10338309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300012200\|Ga0137382_10344923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300012200\|Ga0137382_10568910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300012208\|Ga0137376_10612762	Not Available	941	Open in IMG/M
3300012211\|Ga0137377_10475895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1187	Open in IMG/M
3300012350\|Ga0137372_10155731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1862	Open in IMG/M
3300012350\|Ga0137372_10919524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300012354\|Ga0137366_10071740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2639	Open in IMG/M
3300012356\|Ga0137371_11040654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300012961\|Ga0164302_11150161	Not Available	616	Open in IMG/M
3300012971\|Ga0126369_10881778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300012971\|Ga0126369_11068111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300013100\|Ga0157373_10477666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300013100\|Ga0157373_10959754	Not Available	636	Open in IMG/M
3300013104\|Ga0157370_12142111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300013296\|Ga0157374_12575469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300016294\|Ga0182041_11963122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300016357\|Ga0182032_10928599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300016357\|Ga0182032_11865247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300016371\|Ga0182034_10545943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	972	Open in IMG/M
3300016445\|Ga0182038_11948494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300017959\|Ga0187779_11181127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300018058\|Ga0187766_10587759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300018060\|Ga0187765_11198487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300018064\|Ga0187773_11240836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300019887\|Ga0193729_1038200	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300019888\|Ga0193751_1207504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300021560\|Ga0126371_10121450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2637	Open in IMG/M
3300021560\|Ga0126371_10296323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1743	Open in IMG/M
3300021560\|Ga0126371_10739075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1131	Open in IMG/M
3300021560\|Ga0126371_12748566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300025915\|Ga0207693_10705478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300025931\|Ga0207644_11221720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300025931\|Ga0207644_11756472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300025934\|Ga0207686_11139338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300025949\|Ga0207667_10272065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1732	Open in IMG/M
3300025961\|Ga0207712_11549202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300026088\|Ga0207641_10526089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1151	Open in IMG/M
3300026118\|Ga0207675_100710150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300026498\|Ga0257156_1134483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300028796\|Ga0307287_10290621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300028884\|Ga0307308_10052205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1923	Open in IMG/M
3300028906\|Ga0308309_10263678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1446	Open in IMG/M
3300031573\|Ga0310915_11019974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300031640\|Ga0318555_10029426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2662	Open in IMG/M
3300031713\|Ga0318496_10429376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300031719\|Ga0306917_10225866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1427	Open in IMG/M
3300031719\|Ga0306917_10611862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300031724\|Ga0318500_10238384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300031765\|Ga0318554_10115144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300031779\|Ga0318566_10082480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1564	Open in IMG/M
3300031781\|Ga0318547_10772784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300031782\|Ga0318552_10427379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300031792\|Ga0318529_10472697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300031799\|Ga0318565_10599262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031833\|Ga0310917_10744586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300031897\|Ga0318520_10301173	Not Available	966	Open in IMG/M
3300031910\|Ga0306923_10653403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300031912\|Ga0306921_12220604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300031954\|Ga0306926_10684865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300032039\|Ga0318559_10335343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300032055\|Ga0318575_10406472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300032076\|Ga0306924_11929054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300032089\|Ga0318525_10148149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1204	Open in IMG/M
3300032094\|Ga0318540_10451554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300032955\|Ga0335076_11415543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300033158\|Ga0335077_10147341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2705	Open in IMG/M
3300033290\|Ga0318519_10542528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.00%
Host-Associated	Host-Associated	15.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.17%
Plants	Host-Associated → Plants	15.00%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.33%
Roots	Host-Associated → Plants → Roots	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.67%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.83%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1014729834	3300000956	Soil	IFHQRFYQALAVSIPLIILRLPPVRRWIVDRRAEGRQWLVWLAVAPLAVFYITSMAFIVNEEFFQGIGAFTLSPHAD*
Ga0066817_10070551	3300005146	Soil	LDGFKPFGASNGDGDPIFHQRFYQALAISIPLIILRLPPVRRWVTEQRAQGRQWVVWATFAPLIVLYVTAMAFIINNEIFQGTQAFTLRPIED*
Ga0066815_101004811	3300005164	Soil	FGGPEDGLAVFHQRFYQAVAISVPLILLRLPPVRRWVTEQRAQGRQWVVWATFAPLIVFYLTAMVFIINNEFFIGMQLFQLQAIED*
Ga0070671_1015233652	3300005355	Switchgrass Rhizosphere	KGDGDPVFHQRFYQALAISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED*
Ga0008090_149249691	3300005363	Tropical Rainforest Soil	DGDPVFHQRFYQVMAVSAPLFVLRLPPVRRWIIEQRTAGRAWLAWLVMSPLWTLYLVAIIFMINEEFFTGLKIITMTNLFHN*
Ga0070710_107762351	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LLDGFTPFGGPEGDGDPIMHQRFYQAVAISIPLLVLRLPPVRRWIGEQRAAGRQRLVYIAVLPLAVLFILGFAYIINEEIFTGTMALTLRPPAN*
Ga0070730_110556311	3300005537	Surface Soil	HQAVAISVPLVILRLPPVRRWISDQRAAGRQSRVWLAAAPLIALYLTGFVFIINEEIFTGTMAITLRPPAD*
Ga0070695_1007826592	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QRFYQALAISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED*
Ga0070696_1009805631	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	FHQRFYQAIAISIPLIVLRLPPVRRWIIGQRAKGRQWLVWLTVAPLAVFYITAMAFIINEEIFTGMQIITMHPPAN*
Ga0068861_1006171692	3300005719	Switchgrass Rhizosphere	DGFTPFGAADGDGDPVFHQRFYQAVAVSIPLIVLRLPPVRRWIVDRRAEGRQWLVWLAISPLAVFYITAMAFIVNEEFFTGLKVITMTHLFSN*
Ga0066903_1008960981	3300005764	Tropical Forest Soil	EGDGDPIMHQRFYQAAAISIPLIVLRLPPVRRWIADQRAVGRQRWVYLAFLPLVVLFILGFAYIVNEEIFTGTMVVTLRPPAN*
Ga0066903_1026730972	3300005764	Tropical Forest Soil	ADGDGDPIFHQRFYQAVAVSVPLILLRLPPVRRWVTEQRARGRQWVVYLTFAPLAVFYITALAFIVNEEFFTGTMAMTLHPPLN*
Ga0066903_1077981521	3300005764	Tropical Forest Soil	MPFGGPEGDGDPIMHQRFYQAVAISIPLIVLRLPPVRRWIADQRAAGRQRWVYLACLPLVVLFILGFGYIVNEEIFTGTMVATMRPPAN*
Ga0066903_1088502482	3300005764	Tropical Forest Soil	DGDGDPIFHQRFYWAVAISLPLIVLRLPPVRRWVADQRAEGRQWLVWLTFAPLIVLYLTAMAFIVNEEIFTGTMAILIHPPAN*
Ga0097621_1001995882	3300006237	Miscanthus Rhizosphere	DGIKPFGAADGDGIPVFHQRFYQAMAVSIPLIVLRLPPVRRWVTEQRAQGRQWMVWLTFAPLAVFYITSMAFIINNEIFQGMQAITLQPIED*
Ga0068871_1008719661	3300006358	Miscanthus Rhizosphere	AISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED*
Ga0079221_106782141	3300006804	Agricultural Soil	ADGDGDPVFHQRFYQAAAISIPLVILRLPPVRRWVTQQRANGRQWVVWLTFAPLAVLYVVGFAYIINEEIFTGTMAITMHPPAD*
Ga0075418_122783791	3300009100	Populus Rhizosphere	DGDPIFHQRFYQAVAVSIPLIVLRLPPVRRWIIERRAEGRQWLVWLAVSPLAVLYITAMAFIVNEEFFTGLKVITMTHLFSN*
Ga0105242_115445771	3300009176	Miscanthus Rhizosphere	QRFYQAMAVSIPLIVLRLPPVRRWVTEQRAQGRQWMVWLTFAPLAVFYITSMAFIINNEIFQGMQAITLQPIED*
Ga0105242_125672491	3300009176	Miscanthus Rhizosphere	ANQGDGDPVFHQRFYQAIAISIPLIILRLPPVRRWIVEQRAQGRQWLVWLSVSPLALFYLTAMVFIINEELFTGFKVITMTDLFHN*
Ga0126374_105823521	3300009792	Tropical Forest Soil	RFYQAVAISLPLIVLRLPPVRRWVTEQRAEGRQWLVWLAISPLIVLYVTAMAFIINNEFFQGTQAITLRPIKD*
Ga0126374_112681791	3300009792	Tropical Forest Soil	GDPIFHQRFYQAVAISLPLIVLRLPPVRRWVTEQRAEGRQWLVWLTISPLAVFYITAMVFIINNEFFIGIQQFQLQAVED*
Ga0126380_102505293	3300010043	Tropical Forest Soil	FHQRFYQAVAVSIPLIVLRLPPVRRWIVDRRAEGRQWLVWLAVAPLAVFYITAMAFIVNEEIFTGLKVITMTHLFAN*
Ga0126384_108910541	3300010046	Tropical Forest Soil	RFYWAVAISLPLIILRLPPVRRWVTELRAQGRQWIVWATFAPLILLYITAMVFIINEEIFTGTMAIMIHPPAN*
Ga0126384_119906522	3300010046	Tropical Forest Soil	DPIFHQRFYWAVAISLPLILLRLPPVRRWVTEQRAEGRQWVVWLTLSPLIVLYVTAMVFLINEEIFTGTMSILVHPPAN*
Ga0126373_119066671	3300010048	Tropical Forest Soil	FHQRFYQAVAVSVPLILLRLPPVRRWVTEQRAQGRQWVVYLTFAPLAVFYITALAFIVNEEFFTGTMAMTLHPPLN*
Ga0126373_124950731	3300010048	Tropical Forest Soil	GDPIFHQRFYWAVAISLPLIALRLPPVRRWVADQRAEGRQWLVWLTFAPLIVLYLTAMAFIVNEEIFTGTMAITIRPPAN*
Ga0127503_109226892	3300010154	Soil	VHLLLLDDFTPFGGPQGDGAPVFHQRFYQAVAISIPLVVLRLPPVRRWIAERRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD*
Ga0126370_106525371	3300010358	Tropical Forest Soil	DGDGDPIFHQRFYWAVAISLPLIVLRLPPVRRWVTEQRAEGRAWVVWLTLSPLFLLYLTAMVFLINEEIFTGTMAITVRPPAN*
Ga0126370_114315721	3300010358	Tropical Forest Soil	IFHQRFYWAVAISLPLIILRLPPVRRWVTELRAQGRQWIVWATFAPLILLYITAMVFIINEEIFTGTMAIMIHPPAN*
Ga0126372_105828742	3300010360	Tropical Forest Soil	DDGDGMPFFHQRFYQAVAISVPLIILRIPPVRRWIADQRAEGRQWLVWMTFAPLAVFYLTAMAFIINEEIFTGTMAFTLHPPAD*
Ga0126372_109983432	3300010360	Tropical Forest Soil	LLDGVMPFGGAEGDGDPIMHQRFYQAVAVSIPLIVLRLPPVRRWIADQRAAGRQRWVYLAFLPLVVLFILGFAYIVNEEIFTGTMVVTMRPPAN*
Ga0126372_115240022	3300010360	Tropical Forest Soil	DPVFHQRFYQAVAISIPLIVLRLPPVRRWITDQRAQGRQWLVWLTFAPLAVFYLIAMIFIVNEEFFTGLKIITMTNLFHN*
Ga0126378_115784192	3300010361	Tropical Forest Soil	WAVAISLPLIVLRLPPVRRWVTERRAEGRAWVVWLTLSPLFVLYLTAMVFLINEEIFTGTMAITVRPPAN*
Ga0126378_124230231	3300010361	Tropical Forest Soil	WAVAISLPLIVLRLPPVRRWVTERRAEGRAWVVWLTLSPLFLLYLTAMVFLINEEIFTGTMAITVRPPAN*
Ga0126379_105252481	3300010366	Tropical Forest Soil	PFGSDQGDGDPIFHQRFYQAIAVSIPLIILRLPPVRRWIVEQRAQGRQWLVWVTVAPLAVFYLTAMAFLVNEEIFTGTMAMTLHPPAD*
Ga0126379_116882572	3300010366	Tropical Forest Soil	FGADQGDGDPIFHQRFYQAIAISIPLIVLRIPAVRRWIVEQRAEGRQWLVWLSVSPLALFYLTAMVFIINEELFTGFKVITMTDLFHN*
Ga0126379_130078521	3300010366	Tropical Forest Soil	DGDPIFHQRFYWAVAISLPLIVLRLPPVRRWVTDQRAEGRQWLVWLTLSPLIVLYVTAMVFLINEEIFTGTMSILLHPPAN*
Ga0126379_138462541	3300010366	Tropical Forest Soil	VFHQRFYQALAISLPLVMLRLPPVRRWVIKQRETGRQWRVWLTFAPLFALYLIGFTFIINEEIFTGTMAITLHPPAG*
Ga0126381_1022148402	3300010376	Tropical Forest Soil	GVTPFGGGPGGDGDPVFHQRFYQAVAISIPLVILRLPPVRRWIAGQRAAGRRWRVWLAVAPLAALYIVGLVFIVNEEIFTGTKIITMNPPAN*
Ga0134124_125197142	3300010397	Terrestrial Soil	GASKGDGDPVFHQRFYQALAISIPLIVLRLPPVRRWIVEPRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED*
Ga0126383_101158041	3300010398	Tropical Forest Soil	KPFGAADGDGDPIFHQRFYWAVAISLPLIVLRLPPVRRWVTEQRAEGRAWVVWLTLSPLFLLYLTAMVFLINEEIFTGTMAITVRPPAN*
Ga0126383_105593871	3300010398	Tropical Forest Soil	LLLLDGFMPFGGPEGDGDPVMHQRFYQAVAISIPLIVLRLRPVRRWITDQRAAGRQWAVYLAFLPLAVLFILGFTYIVNEEIFTGSMVLTMRPPAN*
Ga0126383_107371182	3300010398	Tropical Forest Soil	GDGDPIFHQRFYQAIAISIPLIVLRLPPVRRWVTEQRAQGRQWMVYLTFAPLAVFYFTAMAFIINEEIFTGTMAFTLHPPAD*
Ga0126383_108511291	3300010398	Tropical Forest Soil	GAADGDGDPVFHQRFYWAVAISLPLIALRLPPVRRWVTEQRAEGRQWLVWLTFAPLIVLYLTAMVFLVNEEIFTGNMAITIHPPAN*
Ga0126383_119684602	3300010398	Tropical Forest Soil	FTTFGQADGDGDPIMHQRFYQAVAISIPLIVLRLPPVRRWVGDQRAAGRQYVVYFLMLPLIVLFLLGFIYIINEEIFTGTKILTMHPLKD*
Ga0126383_134591022	3300010398	Tropical Forest Soil	GASDGDGDPVFHQRFYQAVAISVPLVILRLPPVRRWISRQRAAGRPRQIWLAMMPLAALYIVGMAFLINEEIFTGTKVITMHPPAN*
Ga0137364_106386662	3300012198	Vadose Zone Soil	FGGDEGDGIPIFHQRFYQAMAVSIPLIVLRLPPVRRWITEQRADGRQWLVWLTVSPLIVLYVTSMIFIINNEIFIGTQAIQLQAIED*
Ga0137383_110639452	3300012199	Vadose Zone Soil	YQAVAISIPLVVLRLPPVRRWIVEQRAEGRAWLVWAAIMPLAALYILGFAFIVNEEIFQGVFAFTIHPLED*
Ga0137382_103383091	3300012200	Vadose Zone Soil	GFRPFGASKGDGDPVFHQRFYQAVAISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTYIINEEIFQGVLAFTIHPLAD*
Ga0137382_103449232	3300012200	Vadose Zone Soil	GDGIPVFHQRFYQAMAVSIPLIVLRLPPVRRWITEQRADGRQWLVWLTVSPLIVLYVTSMVFIINNEMFIGMQAIQLQAIED*
Ga0137382_105689101	3300012200	Vadose Zone Soil	FGAADGDGIPVFHQRFYQAVAISVPLIILRLPPVRRWVTEQRAQGRQWMVWLTFAPLAVFYITSMAFIINNAIFQGMQAITLQPIED*
Ga0137376_106127622	3300012208	Vadose Zone Soil	FHQRFYQAVAVSIPLIVLRLPAVRRWIVERRAEGRQWLVWLAVSPLAVFYITAMAFIVNEEFFTGLKIITMNHLFSN*
Ga0137377_104758951	3300012211	Vadose Zone Soil	RPFGASKGDGDPVFHQRFYQAVAISIPLVVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTYIINEEIFQGVLAFTIHPLAD*
Ga0137372_101557313	3300012350	Vadose Zone Soil	GDPVFHQRFYQAVAISIPLVILRLPPVRRWITDQRAAGRQGRVWLAVMPLATAFILGFAFIINEEIFTGILAFTMHPPAD*
Ga0137372_109195242	3300012350	Vadose Zone Soil	GDPVFHQRFYQAVAISIPLVILRLPPVRRWITDQRAAGRQGRVWLAVMPLATAFILGFAFIINEEIFTGTLAFTMHPPAD*
Ga0137366_100717401	3300012354	Vadose Zone Soil	ADGDGDPVFHQRFYQAVAISIPLVILRLPPVRRWITDQRAAGRQGRVWLAVMPLATAFILGFAFIINEEIFTGTLAFTMHPPAD*
Ga0137371_110406541	3300012356	Vadose Zone Soil	GDGDPIFHQRFYQAIAISIPLVILRLPPVRRWISEQRAANRHNRLWLTIVPLAALYIAGFIFIINEEIFTGTMAITLHPPADWHR*
Ga0164302_111501612	3300012961	Soil	AISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALSILGFTFIINEEIFQGVFAFTIHPLED*
Ga0126369_108817781	3300012971	Tropical Forest Soil	MPIFHQRFYQALAISIPLIILRLPPVRRWIVEQRAQGRQWAVYLTFAPLAVFYITAMAFIINEEIFTGTMAFTLHPPAD*
Ga0126369_110681112	3300012971	Tropical Forest Soil	DPVFHQRFYQAAAISVPLVILRLPPVRRWIASQRAEGRHRQVWFAVAPLAALYVVGMAFLVNEEIFTGMKVITMHPPAN*
Ga0157373_104776662	3300013100	Corn Rhizosphere	FHQRFYQAMAVSIPLIVLRLPPVRRWVTEQRAQGRQWMVWLTFAPLAVFYITSMAFIINNEIFQGMQAITLQPIED*
Ga0157373_109597541	3300013100	Corn Rhizosphere	DPVFHQRFYQALAISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED*
Ga0157370_121421112	3300013104	Corn Rhizosphere	FHQRFYQAIAISIPLIILRLPPVRRWIVEQRAQGRQWLVWLSVSPLALFYLTAMVFIINEELFTGFKVITMTDLFHN*
Ga0157374_125754691	3300013296	Miscanthus Rhizosphere	ADGDGMPIFHQRFYQALAISIPLIILRLPPVRRWIIEQRAQGRQWMVYLTFAPLAVFYITAMAFIINEEIFTGTMAFTLNPPAD*
Ga0182041_119631221	3300016294	Soil	LDGTPVFHQRFYQAVAISIPLVVLRLPPVRRWIAETRAAGQQWKVWLGVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0182032_109285991	3300016357	Soil	PVFHQRFYQAVAISIPLIILRLPPVRRWIIEQRAQGRQWLVWLAAAPFAVFYVTAMAFIVNEEIFTGTMAITLHPPAD
Ga0182032_118652471	3300016357	Soil	GAADGDGDPVFHQRFYQAVAVSVPLIILRLPPVRRWIIEQRAEGRQWLVWLTVAPLALLYLTSMAFIINEEIFTGTMAITLHPPAN
Ga0182034_105361462	3300016371	Soil	DPIFHQRFYQALAVSAPLFVLRLPPVRRWVIEQRTNGRAWLPWLALSPLIAFYFLGFIFIINEEFFTGLKIITMTNLFHN
Ga0182034_105459431	3300016371	Soil	DQGDGDPIFHQRFYQAVAVSIPLLVLRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0182038_119484942	3300016445	Soil	ADGDGDPVFHQRFYQAVAISIPLIILRLPPVRRWIIEQRAQGRQWLVWLAAAPFAVFYVTAMAFIVNEEIFTGTMAITLHPPAD
Ga0187779_111811271	3300017959	Tropical Peatland	PIFHQRFYQAVAISIPLIVLRLPPVRRWIVEQRAQDRQWLVWLAVAPMAVFYLTAMAFIVNEEIFTGTMAITLHPPAD
Ga0187766_105877592	3300018058	Tropical Peatland	DGDPIFHQRFYQAVAISIPLIVLRLPPVRRWVVEQRALGRQWLVWLAVAPMAVFYLTAMAFIVNEEIFTGTMAITLHPPAD
Ga0187765_111984871	3300018060	Tropical Peatland	DGDGIPIFHQRFYQAIAISIPLIILRLPPVRRWVIEQRAQGRQWMVYLTFAPLAVLYFTAMAFIVNEEIFTGTMAFTLNPPND
Ga0187773_112408361	3300018064	Tropical Peatland	DGFKPFGAADGDGMPIFHQRFYQAIAISIPLIILRLPPVRRWIIEQRAQGRQWMVYLTFAPLAVFYFTAMAFIVNEEIFTGTMAFTLNPPAD
Ga0193729_10382005	3300019887	Soil	FHQRFYQAVAISIPLVILRLPPVRRWITDQRAAGRQGRVWLAVMPLATAFILGFAFIINEEIFTGTLAFTMHPPAD
Ga0193751_12075041	3300019888	Soil	GAADGDGDPVFHQRFYQAVAISIPLVILRLPPVRRWITDQRAAGRQGRVWLAVMPLATAFILGFAFIINEEIFTGTLAFTMHPPAD
Ga0126371_101214503	3300021560	Tropical Forest Soil	FLLDGIKPFGGADGDGDPIFHQRFYQAVAVSIPLIVLRLPPVRRWIVEQRAQGRQWLVWLAVAPIAVFYLTGMAFLVNEEFFTGTMAMTLHPPAD
Ga0126371_102963231	3300021560	Tropical Forest Soil	LLLDGATPFGADQGDGDPIFHQRFYQAVAISLPLIILRLPPVRRWVTEQRAQGRQWLVWMTFAPLAVFYLTAMAFIVNEEIFTGTMAFTLHPPAD
Ga0126371_107390752	3300021560	Tropical Forest Soil	GAADGDGDPIFHQRFYQAVAVSVPLILLRLPPVRRWVTEQRARGRQWVVYLTFAPLAVFYITALAFIVNEEFFTGTMAMTLHPPLN
Ga0126371_110652161	3300021560	Tropical Forest Soil	DGDPVFHQRFYQAVAVSIPLFVLRLPPVRRWVIEQRTNGRAWLPWVALSPLIAFYFLGFIFIINEEFFTGLKIITMTNLFHN
Ga0126371_127485662	3300021560	Tropical Forest Soil	GDGDPVFHQRLYQAVAISIPLVVLRLPPVRRWISEQRAAGRQRRVWLAIAPLAALFLIGFVFIINEEIFTGTMAITLRPPAN
Ga0207693_107054781	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DGDGIPVFHQRFYQAMAVSIPLIILRLPPVRRWITEQRADGRQWLVWLTVSPLIVLYVTSMVFIINNEIFIGTQAIQLQAIED
Ga0207644_112217201	3300025931	Switchgrass Rhizosphere	KGDGDPVFHQRFYQALAISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED
Ga0207644_117564721	3300025931	Switchgrass Rhizosphere	TPFGAADGDGMPIFHQRFYQALAISIPLIILRLPPVRRWIIEQRAQGRQWMVYLTFAPLAVFYITAMAFIINEEIFTGTMAFTLNPPAD
Ga0207686_111393381	3300025934	Miscanthus Rhizosphere	QRFYQAMAVSIPLIVLRLPPVRRWVTEQRAQGRQWMVWLTFAPLAVFYITSMAFIINNEIFQGMQAITLQPIED
Ga0207667_102720653	3300025949	Corn Rhizosphere	FHQRFYQAIAISIPLIVLRLPPVRRWIIGQRAKGRQWLVWLTVAPLAVFYITAMAFIINEEIFTGMQIITMHPPAN
Ga0207712_115492022	3300025961	Switchgrass Rhizosphere	GDGAAIFHQRFYQALAVSIPLIILRLPPVRRWIVDRRAEGRQWLVWLAVAPLAVFYITSMAFIVNEEFFQGIGAFTLSPHAD
Ga0207641_105260892	3300026088	Switchgrass Rhizosphere	DGDGIPVFHQRFYQAMAVSIPLIVLRLPPVRRWVTEQRAQGRQWMVWLTFAPLAVFYITSMAFIINNEIFQGMQAITLQPIED
Ga0207675_1007101502	3300026118	Switchgrass Rhizosphere	LLDGFTPFGAADGDGDPVFHQRFYQAVAVSIPLIVLRLPPVRRWIVDRRAEGRQWLVWLAISPLAVFYITAMAFIVNEEFFTGLKVITMTHLFSN
Ga0257156_11344831	3300026498	Soil	GAADGDGMPVFHQRFYQALAISIPLIILRLPPVRRWIVEQRAQGRQWMVYLTFAPLAVFFITAMAFIINEEIFTGTMAFTLHPPAD
Ga0307287_102906212	3300028796	Soil	DGFTPFGAADGDGDPVFHQRFYQAIAVSIPLIVLRLPPVRRWIVERRAEGRQWLVWLAVAPLAVFYITAMAFIVNEEFFTGLKVITMTHLFAN
Ga0307308_100522054	3300028884	Soil	LDGFRPFGASKGDGDPVFHQRFYQAVAISIPLIVLRLPPVRRWIVEQRAEGRAWLVWLAIMPLAALYILGFTFIINEEIFQGVFAFTIHPLED
Ga0308309_102636782	3300028906	Soil	FTPFGGPEGDGDPIMHQRFYQAVAISIPLLVLRLPPVRRWIAEQRAAGRQRIVYLAVLPLAVLFILGFAYIINEEIFTGTMVMTMRPPAN
Ga0310915_110199741	3300031573	Soil	DGFTTFGQADGDGDPIMHQRFYQAVAISIPLIVLRLPPVRRWVGEQRAAGRQYVVYFVMLPLIVLFLLGFIYIINEEIFTGTKILTMHPLKD
Ga0318555_100294263	3300031640	Soil	VFHQRFYQALAVSIPLIVLRLPPVRRWIVEQRAQGRQWLVWVTVAPLAVFYLTAMAFLVNEEIFTGTMAITLRPPAN
Ga0318496_104293762	3300031713	Soil	TTFGQADGDGDPIMHQRFYQAVAISIPLIVLRLPPVRRWVGEQRAAGRQYVVYFVMLPLIVLFLLGFIYIINEEIFTGTKILTMHPLKD
Ga0306917_102258661	3300031719	Soil	GADQGDGDPIFHQRFYQAVAISIPLLVLRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0306917_106118621	3300031719	Soil	LHLLLLDDFVPFGAPQGDGDPVFHQRFYQAVAISIPLVVLRLPPVRRWIAETRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318500_102383841	3300031724	Soil	FGAPQGDGDPVFHQRFYQAVVISIPLVVLRLPPVRRWITDTRAAGQQWKVWLVVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318554_101151441	3300031765	Soil	RFYQAVAVSIPLLVLRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0318566_100824801	3300031779	Soil	GAADGDGDPVFHQRFYQAVAISIPLIILRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0318547_107727841	3300031781	Soil	GTADGDGDPVFHQRFYQAVAVSVPLIILRLPPVRRWIIEQRAEGRQWLVWLTVAPLALLYLTSMAFIINEEIFTGTMAITLHPPAN
Ga0318552_104273791	3300031782	Soil	FVPFGGPQGDGAPVFHQRFYQAVAISIPLVVLRLPPVRRWIAETRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318529_104726971	3300031792	Soil	FGGPQGDGAPVFHQRFYQAVAISIPLVVLRLPPVRRWIAETRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318548_100056855	3300031793	Soil	GDADPIMHQRFYQAVAISIPLIVLRLPPVRRWVGEQRAAGRQYVVYFVMLPLIVLFLLGFIYIINEEIFTGTKILTMHPLKD
Ga0318565_105992621	3300031799	Soil	LDGLRPFGTADGDGDPVFHQRFYQAVAVSVPLIILRLPPVRRWIIEQRAEGRQWLVWLTVAPLALLYLTSMAFIINEEIFTGTMAITLHPPAN
Ga0310917_107445862	3300031833	Soil	HQRFYQAVAISIPLVVLRLPPVRRWIAETRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318520_103011731	3300031897	Soil	FYQAVAISIPLIILRLPPVRRWIIEQRAQGRQWLVWLAAAPFAVFYVTAMAFIVNEEIFTGTMAITLHPPAD
Ga0306923_106534031	3300031910	Soil	FYQAVAVSIPLLVLRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0306921_122206042	3300031912	Soil	GGPEGDGDPIMHQRFYQAVAISIPLIVLRLPPVRRWIAGQWAAGRQRLVYLAILPLAVLFIFGFAYIVNEEIFTGSMVLTMRPPAN
Ga0306926_106848653	3300031954	Soil	PIFHQRFYQAVAISIPLLVLRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0318559_103353431	3300032039	Soil	FHQRFYQAVAISIPLVVLRLPPVRRWIAETRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318575_104064721	3300032055	Soil	HQRFYQAVAVSVPLIILRLPPVRRWIIEQRAEGRQWLVWLTVAPLALLYLTSMAFIINEEIFTGTMAITLHPPAN
Ga0306924_119290541	3300032076	Soil	DDFVPFGGPQGDGAPVFHQRFYQAVAISIPLVVLRLPPVRRWVAETRAAGQQWKVWLAVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318525_101481492	3300032089	Soil	LDDFVPFGAPQGDGDPVFHQRFYQAVVISIPLVVLRLPPVRRWITDTRAAGQQWKVWLVVAPLAALWILGFAYIINEEIFTGTEAITMRPPSD
Ga0318540_104515542	3300032094	Soil	LLDGLRPFGADQGDGDPIFHQRFYQAVAVSIPLLVLRLPPVRRWIIEQRTEGRAWLVWLTVAPLVVLYVVGYAFIINEEFFQGHLAFTLHPAED
Ga0335076_114155431	3300032955	Soil	KPFGASDGDGIPIFHQRFYQAIAISVPLIILRLPPVRRWVTEQRAQGRQWMVYLTFAPLAVFYFTAMAFIVNEEIFTGTMAFTLHPPAD
Ga0335077_101473411	3300033158	Soil	PFGADDGDGDPVFHQRFYWAVAISLPLIALRLPPVRRWVTDQRAEGRAWVVWLTLSPLFLLYLTAMFFLINEELFTGFKAITLTPPAN
Ga0318519_105425281	3300033290	Soil	QNNGTDGDPVFHQRFYQAVAISIPLFVLRLPPVRRWVIEQRTNGRAWLPWLALSPLIAFYFLGFIFIINEEFFTGLKIITMTSLFHN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073702

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences