Metagenome Family F073735

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073735
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	96 residues
Representative Sequence	MSETRVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV
Number of Associated Samples	83
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.00 %
% of genes near scaffold ends (potentially truncated)	40.83 %
% of genes from short scaffolds (< 2000 bps)	75.83 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (31.667 % of family members)
Environment Ontology (ENVO)	Unclassified (31.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.80% β-sheet: 0.00% Coil/Unstructured: 31.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04828	GFA	42.50
PF07494	Reg_prop	18.33
PF06906	DUF1272	10.00
PF10282	Lactonase	3.33
PF07495	Y_Y_Y	2.50
PF07859	Abhydrolase_3	1.67
PF02518	HATPase_c	1.67
PF00072	Response_reg	0.83
PF00106	adh_short	0.83
PF00512	HisKA	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	42.50
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	18.33
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	10.00
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.50
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.00 %
Unclassified	root	N/A	32.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	21.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	20.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.67 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.83 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	8.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.83 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	8.33 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.67 %
Ideonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella	0.83 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	8.33 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.67 %
unclassified Ideonella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella	0.83 %
unclassified Parvularcula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	8.33 %
Aggregicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Aggregicoccus	1.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.67 %
Ideonella sp. A 288	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. A 288	0.83 %
Parvularcula sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	8.33 %
unclassified Aggregicoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Aggregicoccus → unclassified Aggregicoccus	1.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.67 %
Ideonella sp. A 288	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. A 288	0.83 %
Parvularcula sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	8.33 %
Aggregicoccus sp. 17bor-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Aggregicoccus → unclassified Aggregicoccus → Aggregicoccus sp. 17bor-14	1.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.67 %
Ideonella sp. A 288	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. A 288	0.83 %
Parvularcula sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8783522	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
2088090015\|GPICI_9109503	All Organisms → cellular organisms → Bacteria → Proteobacteria	11385	Open in IMG/M
2088090015\|GPICI_9184319	All Organisms → cellular organisms → Bacteria → Proteobacteria	6534	Open in IMG/M
2228664021\|ICCgaii200_c1052761	Not Available	619	Open in IMG/M
2228664021\|ICCgaii200_c1053170	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
2228664021\|ICCgaii200_c1053305	Not Available	514	Open in IMG/M
3300000559\|F14TC_102385130	Not Available	515	Open in IMG/M
3300000891\|JGI10214J12806_11532246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1251	Open in IMG/M
3300000891\|JGI10214J12806_11599909	Not Available	1405	Open in IMG/M
3300003267\|soilL1_10099694	All Organisms → cellular organisms → Bacteria → Proteobacteria	2720	Open in IMG/M
3300004114\|Ga0062593_100075284	All Organisms → cellular organisms → Bacteria → Proteobacteria	2256	Open in IMG/M
3300004463\|Ga0063356_100143995	All Organisms → cellular organisms → Bacteria → Proteobacteria	2701	Open in IMG/M
3300004463\|Ga0063356_101803039	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300004480\|Ga0062592_100273067	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300005328\|Ga0070676_11009742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	625	Open in IMG/M
3300005332\|Ga0066388_104964056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	676	Open in IMG/M
3300005334\|Ga0068869_100966716	Not Available	740	Open in IMG/M
3300005530\|Ga0070679_100605344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1039	Open in IMG/M
3300005546\|Ga0070696_100676902	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300005840\|Ga0068870_10226953	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300005844\|Ga0068862_100186568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1864	Open in IMG/M
3300006058\|Ga0075432_10170013	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300006058\|Ga0075432_10372340	Not Available	610	Open in IMG/M
3300006196\|Ga0075422_10144860	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300006844\|Ga0075428_100102034	All Organisms → cellular organisms → Bacteria → Proteobacteria	3128	Open in IMG/M
3300006844\|Ga0075428_100298667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1731	Open in IMG/M
3300006845\|Ga0075421_100003608	All Organisms → cellular organisms → Bacteria → Proteobacteria	18525	Open in IMG/M
3300006845\|Ga0075421_100966549	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300006845\|Ga0075421_101353804	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300006845\|Ga0075421_102258253	Not Available	573	Open in IMG/M
3300006846\|Ga0075430_100054589	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300006846\|Ga0075430_100431368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300006847\|Ga0075431_100610676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300006847\|Ga0075431_101148268	Not Available	740	Open in IMG/M
3300006847\|Ga0075431_101629179	Not Available	603	Open in IMG/M
3300006853\|Ga0075420_100067804	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300006853\|Ga0075420_100566979	Not Available	980	Open in IMG/M
3300006871\|Ga0075434_100563345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1159	Open in IMG/M
3300006871\|Ga0075434_101791393	Not Available	621	Open in IMG/M
3300006880\|Ga0075429_100005983	All Organisms → cellular organisms → Bacteria → Proteobacteria	10513	Open in IMG/M
3300006880\|Ga0075429_100594324	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300006894\|Ga0079215_11565702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	523	Open in IMG/M
3300006918\|Ga0079216_10408614	Not Available	856	Open in IMG/M
3300006918\|Ga0079216_11005687	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006969\|Ga0075419_10003878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9534	Open in IMG/M
3300006969\|Ga0075419_10193886	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300007004\|Ga0079218_11089469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300007076\|Ga0075435_100985606	Not Available	736	Open in IMG/M
3300009094\|Ga0111539_10112801	All Organisms → cellular organisms → Bacteria → Proteobacteria	3189	Open in IMG/M
3300009094\|Ga0111539_10241784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2102	Open in IMG/M
3300009100\|Ga0075418_10088450	All Organisms → cellular organisms → Bacteria → Proteobacteria	3292	Open in IMG/M
3300009147\|Ga0114129_10030654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7608	Open in IMG/M
3300009148\|Ga0105243_10360260	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300009156\|Ga0111538_11629707	Not Available	813	Open in IMG/M
3300009162\|Ga0075423_11830890	Not Available	655	Open in IMG/M
3300009553\|Ga0105249_11136457	Not Available	851	Open in IMG/M
3300010375\|Ga0105239_12867126	Not Available	563	Open in IMG/M
3300010399\|Ga0134127_12578258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	588	Open in IMG/M
3300010400\|Ga0134122_10730137	Not Available	935	Open in IMG/M
3300010400\|Ga0134122_11263441	Not Available	743	Open in IMG/M
3300010403\|Ga0134123_10948419	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300012912\|Ga0157306_10003294	Not Available	2943	Open in IMG/M
3300014325\|Ga0163163_10831257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	987	Open in IMG/M
3300015371\|Ga0132258_10079086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7663	Open in IMG/M
3300015371\|Ga0132258_10623695	All Organisms → cellular organisms → Bacteria → Proteobacteria	2709	Open in IMG/M
3300018000\|Ga0184604_10367983	Not Available	512	Open in IMG/M
3300018422\|Ga0190265_10513844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1311	Open in IMG/M
3300018429\|Ga0190272_11287195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	726	Open in IMG/M
3300018466\|Ga0190268_10395132	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300018476\|Ga0190274_10437503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300018476\|Ga0190274_10467133	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300018476\|Ga0190274_12524104	Not Available	611	Open in IMG/M
3300019360\|Ga0187894_10019137	All Organisms → cellular organisms → Bacteria → Proteobacteria	4947	Open in IMG/M
3300019377\|Ga0190264_10270513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1003	Open in IMG/M
3300019377\|Ga0190264_11390110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	600	Open in IMG/M
3300023057\|Ga0247797_1049253	Not Available	603	Open in IMG/M
3300023066\|Ga0247793_1090579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	528	Open in IMG/M
3300025901\|Ga0207688_10575471	Not Available	709	Open in IMG/M
3300025907\|Ga0207645_10048999	All Organisms → cellular organisms → Bacteria → Proteobacteria	2697	Open in IMG/M
3300025908\|Ga0207643_10012327	All Organisms → cellular organisms → Bacteria → Proteobacteria	4621	Open in IMG/M
3300025923\|Ga0207681_11558894	Not Available	553	Open in IMG/M
3300025930\|Ga0207701_10429699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1135	Open in IMG/M
3300025942\|Ga0207689_11763845	Not Available	512	Open in IMG/M
3300026095\|Ga0207676_12353745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	530	Open in IMG/M
3300026121\|Ga0207683_10423917	Not Available	1225	Open in IMG/M
3300027873\|Ga0209814_10258706	Not Available	755	Open in IMG/M
3300027880\|Ga0209481_10018892	All Organisms → cellular organisms → Bacteria → Proteobacteria	3032	Open in IMG/M
3300027880\|Ga0209481_10259475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	876	Open in IMG/M
3300027886\|Ga0209486_10809090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. A 288	614	Open in IMG/M
3300027907\|Ga0207428_10038044	All Organisms → cellular organisms → Bacteria → Proteobacteria	3914	Open in IMG/M
3300027909\|Ga0209382_10003757	All Organisms → cellular organisms → Bacteria → Proteobacteria	20829	Open in IMG/M
3300027909\|Ga0209382_10011358	All Organisms → cellular organisms → Bacteria → Proteobacteria	11058	Open in IMG/M
3300027909\|Ga0209382_10902785	Not Available	930	Open in IMG/M
3300027909\|Ga0209382_11159343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Aggregicoccus → unclassified Aggregicoccus → Aggregicoccus sp. 17bor-14	793	Open in IMG/M
3300027909\|Ga0209382_12274776	Not Available	510	Open in IMG/M
3300028380\|Ga0268265_10178453	Not Available	1823	Open in IMG/M
3300031538\|Ga0310888_10457451	Not Available	757	Open in IMG/M
3300031547\|Ga0310887_10008902	All Organisms → cellular organisms → Bacteria	3589	Open in IMG/M
3300031548\|Ga0307408_100062148	All Organisms → cellular organisms → Bacteria → Proteobacteria	2728	Open in IMG/M
3300031548\|Ga0307408_100120009	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300031548\|Ga0307408_101335112	Not Available	673	Open in IMG/M
3300031548\|Ga0307408_101622323	Not Available	615	Open in IMG/M
3300031562\|Ga0310886_10151345	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300031562\|Ga0310886_10320777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	891	Open in IMG/M
3300031901\|Ga0307406_10395082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300031911\|Ga0307412_10186541	Not Available	1565	Open in IMG/M
3300031911\|Ga0307412_11978269	Not Available	539	Open in IMG/M
3300031913\|Ga0310891_10296088	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300031943\|Ga0310885_10476300	Not Available	677	Open in IMG/M
3300031995\|Ga0307409_101658742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Aggregicoccus → unclassified Aggregicoccus → Aggregicoccus sp. 17bor-14	668	Open in IMG/M
3300032002\|Ga0307416_100277677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1650	Open in IMG/M
3300032002\|Ga0307416_101163208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	877	Open in IMG/M
3300032005\|Ga0307411_11449184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	630	Open in IMG/M
3300032005\|Ga0307411_12224161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	514	Open in IMG/M
3300032012\|Ga0310902_11045896	Not Available	569	Open in IMG/M
3300032013\|Ga0310906_11430730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	508	Open in IMG/M
3300032075\|Ga0310890_10950790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	689	Open in IMG/M
3300032211\|Ga0310896_10114544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1228	Open in IMG/M
3300032421\|Ga0310812_10006971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	3675	Open in IMG/M
3300033412\|Ga0310810_11207178	Not Available	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.33%
Environmental	Environmental	41.67%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.33%
Terrestrial	Environmental → Terrestrial	40.83%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	46.67%
Soil	Environmental → Terrestrial → Soil	40.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Sediment	Environmental → Aquatic → Sediment	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	44.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	3.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	44.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	31.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03481680	2088090015	Soil	MSEMQSREMRHYTALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRQVRDPALASTALTVLELVADGVTVALFAIATLGGIMRIEGQV
GPICI_01458640	2088090015	Soil	MSEMQPLETRERPRRYSALRSTLIGYGVLAFTFFPPTRTLMLWGVGVQVAVILVRQLIERRVSDPATAGTALMVIELIADGVTVALFAIATLGGIMRIAEQV
GPICI_01268020	2088090015	Soil	MSEMQSREMRHYAALRSALIGYGVLAFAFFPPTRTLMLWGIGVQVVVILVRQLIQRRVRDAAMASQALMVLELLADGVTVALFAIATFGGILRIESQI
ICCgaii200_10527612	2228664021	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVAVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
ICCgaii200_10531702	2228664021	Soil	MSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVFVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGI
ICCgaii200_10533051	2228664021	Soil	MRHYTALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRQVRDPALASTALTVLELVADGVTVALF
F14TC_1023851302	3300000559	Soil	MSGTRARTLSYGALRSALIGYGVLAFTFFPPTRRLMLWGVGAQIAVILXRKLIERQVRDPAIAGQALTVVELLGDGVTVALFAIATLGGIMQVEQQ
JGI10214J12806_115322463	3300000891	Soil	AAGDPAAAKCVNQYAGRRGSQRHMSEMQPLETRERPRRYSALRSTLIGYGVLAFTFFPPTRTLMLWGVGVQVAVILVRQLIERRVSDPATAGTALMVIELIADGVTVALFAIATLGGIMRIAEQV*
JGI10214J12806_115999092	3300000891	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILR
soilL1_100996942	3300003267	Sugarcane Root And Bulk Soil	MAETQARGRSHGALRSTLIGYGVLAFTFFPPTRTLMLCGVGAQLAVIVARKLIEMRVRDPAVAAQALMLIELLGDGVTVALFAIATLGGILRAEQQI*
Ga0062593_1000752842	3300004114	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI*
Ga0063356_1001439954	3300004463	Arabidopsis Thaliana Rhizosphere	FGVLAFTFFPPTRTLMVWGVGVQIAVILARMFIERRASDPASAGQALTVVELLGDGVTVALFAIATLGGIMQLGAEV*
Ga0063356_1018030392	3300004463	Arabidopsis Thaliana Rhizosphere	MQSREMRHYAALRSALIGYGVLAFAFFPPTRTLMLWGIGVQVVVILVRQLIQRRVRDAAMASQALMVLELLADGVTVALFAIATFGGILRIESQI*
Ga0062592_1002730672	3300004480	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI*
Ga0070676_110097421	3300005328	Miscanthus Rhizosphere	CGKMCEPVGPAGEEPRRDMSETQVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0066388_1049640561	3300005332	Tropical Forest Soil	MSELPSRETSESSRRYAALRSVLIGYGVLAFTFLPPTRTLMLWGVGVQVAVILVRKLIERQVRDPQMASQSLMLLELVADGVTVALFAIATLGGIMQFAAQV*
Ga0068869_1009667161	3300005334	Miscanthus Rhizosphere	MSETQVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0070679_1006053441	3300005530	Corn Rhizosphere	STLIGYGVLAFTFFPPTRTLMLWGVGVQVAVILVRQLIERRVSDPATAGTALMVIELIADGVTVALFAIATLGGIMRIAEQV*
Ga0070696_1006769022	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSETRARTLSYGALRSALIGYGLLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI*
Ga0068870_102269532	3300005840	Miscanthus Rhizosphere	MSEMQSREMRRYTALRSALIGYGVLAFSFFPPTRALMLWGVGVQVAVILVRQLIQRQVRDPALAGTALMVLELVADGVTVALFAIATFGGIMQIESQV*
Ga0068862_1001865683	3300005844	Switchgrass Rhizosphere	MQSREMRHYTALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRQVRDPALAGTALMVLELVADGVTVALFAIATFGGIMQIESQV*
Ga0075432_101700132	3300006058	Populus Rhizosphere	MSEMQSREMRHYAALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRRVRDPALASTALTVLELVADGVTVALFAIATLGGIMRIEGQV*
Ga0075432_103723401	3300006058	Populus Rhizosphere	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRI
Ga0075422_101448602	3300006196	Populus Rhizosphere	MSEMQSREMRRYGAIRSTLIGYGVLAFAFFPPTRTLMLWGVGVQIATIVAGKLIERRVRDPEIAAKALMLLELVADGVTVALFALATFGGILRFEEQV*
Ga0075428_1001020344	3300006844	Populus Rhizosphere	MSEAQVRGRSFAGLRSALIGYGVLAFTFFAPTRTLMLWGVGAQIAVIVARKVVERQVRDPAIGGQALMLIELLGDGATVALFAIATLGGIMGIEQQI*
Ga0075428_1002986671	3300006844	Populus Rhizosphere	ALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI*
Ga0075421_1000036088	3300006845	Populus Rhizosphere	MSEAQVRGRSFAGLRSALIGYGVLAFTFFAPTRTLMLWGVGAQIAVIVARKVVERQVRDPAIAGQALMLIELLGDGATVALFAIATLGGIMGIEQQI*
Ga0075421_1009665492	3300006845	Populus Rhizosphere	MSEMQSREMRHYAALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVVVILVRQLIQRRVRDAAMASQALMVLELLADGVTVALFAIATFGGILRIESQI*
Ga0075421_1013538042	3300006845	Populus Rhizosphere	MSETQVRGRSFAGLRSTLIGYGVLAFTFFPPTRALMLWGVGAQIAVIVARKLVERQVRDPAIAGQALMVIELLGDGATVALFAVATLGGIMGIAQQI*
Ga0075421_1022582531	3300006845	Populus Rhizosphere	HMSEIRSVGALRSTLIGFGVLAFTFFPPTRTLMVWGVGVQIAVILARMFIERRASDPASAGQALTVVELLGDGVTVALFAIATLGGIMQLGAEV*
Ga0075430_1000545892	3300006846	Populus Rhizosphere	MSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI*
Ga0075430_1004313682	3300006846	Populus Rhizosphere	MQSREMRRYGAIRSTLIGYGVLAFAFFPPTRTLMLWGVGVQIATIVAGKLIERRVRDPEIAAKALMLLELVADGVTVALFALATFGGILRFEEQV*
Ga0075431_1006106762	3300006847	Populus Rhizosphere	MSEMQSREMRHYTALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRQVRDPALASTALTVLELVADGVTVALFAIATLGGIMRIEGQV*
Ga0075431_1011482682	3300006847	Populus Rhizosphere	PMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGIGVQIAVIVARKLIERQVRDPAMARQALMLLELLGDGTTVALFANATLGGIMQFEQQI*
Ga0075431_1016291792	3300006847	Populus Rhizosphere	MSETQVRGRSFAGLRSTLIGYGVLAFTFFPPTRALMLWGVGAQIAVIVARKLVERQVRDPAIAGQALMVIELLGDGATVALFAIATLGGIMGIAQQI*
Ga0075420_1000678042	3300006853	Populus Rhizosphere	MSETQVRGRSFAGLRSTLIGYGVLAFTFFPPTRALMLWGIGAQIAVIVARKLVERQVRDPAIAGQALMVIELLGDGATVALFAVATLGGIMGIAQQI*
Ga0075420_1005669792	3300006853	Populus Rhizosphere	MSEIRSVGALRSTLIGFGVLAFTFFPPTRTLMVWGVGVQIAVILARMFIERRASDPASAGQALTVVELLGDGVTVALFAIATLGGIMQLGAEV*
Ga0075434_1005633452	3300006871	Populus Rhizosphere	MSETRVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0075434_1017913931	3300006871	Populus Rhizosphere	MRHYAALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRRLIQRQVRDPALAGTALMVLELLADGVTVALFAIATFGGIMRIAEDV*
Ga0075429_1000059838	3300006880	Populus Rhizosphere	MGVKWGSVRYGYRPNSSRLEIRLRQNVRPMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI*
Ga0075429_1005943242	3300006880	Populus Rhizosphere	MQSREMRHYAALRSALIGYGVLAFAFFPPTRTLMLWGIGVQVAVILVRQLIQRRVRDAAMASQALMVLELLADGVTVALFAIATFGGILRIESQI*
Ga0079215_115657021	3300006894	Agricultural Soil	LGALRSTLIGFGVLAFTFFPPTRALMLWGVGVQIAVILARMLIERRASDPVIAGQALTVVELLGDGVTVALFAIATLGGIMQLGAEV*
Ga0079216_104086141	3300006918	Agricultural Soil	RHMSEIQRPRSVGGLRSALIGYGVLAFTFFPPTRSLMLWGIAVQIAVIVARQLIEHRLRDPAAASQALTVVELLGDGVTVAVFAIATLGGIMRFEEQI*
Ga0079216_110056871	3300006918	Agricultural Soil	MSEIRSVGALRSTLIGIGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMAIEHRVKDPAIARQTLTVVELLGDGVTVALFAIATLGGIMQLG
Ga0075419_100038787	3300006969	Populus Rhizosphere	MGVKWGSVRHGYRPNSSRLEIRLRQNVRPMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI*
Ga0075419_101938861	3300006969	Populus Rhizosphere	MSETRTRTLSYGALRSALIGYGVLAFTFFPPTLTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVAL
Ga0079218_110894692	3300007004	Agricultural Soil	MSEIRSVGALRSTLIGFGVLAFTFFPPTRALMLWGVGVQIAVILARMLIERRASDPAIAGQALTVVELLGDGVTVALFAIATLGGIMQLGAEV*
Ga0075435_1009856061	3300007076	Populus Rhizosphere	TQVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0111539_101128012	3300009094	Populus Rhizosphere	MSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGIGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI*
Ga0111539_102417844	3300009094	Populus Rhizosphere	LIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0075418_100884501	3300009100	Populus Rhizosphere	MSEAQVRGRSFAGLRSALIGYGVLAFTFFAPTRTLMLWGVGAQIAVIVARKVVERQVRDPAIAGQALMLIELLGDGATVALFAI
Ga0114129_100306543	3300009147	Populus Rhizosphere	MSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVFVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI*
Ga0105243_103602602	3300009148	Miscanthus Rhizosphere	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALVIARKLVERQIRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI*
Ga0111538_116297071	3300009156	Populus Rhizosphere	VGPAGEELRRDMSETQVRGRSFGALRSTLIGYGVLAFTFFPPSRTLMLWGVGAQIAVILARKLIERQVRDPTIAAQASMVVELLGDGATVLLFAIATLGGILQVEQQV*
Ga0075423_118308902	3300009162	Populus Rhizosphere	GALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0105249_111364571	3300009553	Switchgrass Rhizosphere	MSETQVRGRSFGALRSILIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATVGGIMQGEQQV*
Ga0105239_128671261	3300010375	Corn Rhizosphere	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAI
Ga0134127_125782582	3300010399	Terrestrial Soil	MPEMRSPNKVPGVSPGALRSALIGYGVLAFTFFPPSRTLVLWGLTSQVIAIVMRWLIKRQLRDPAVAGQALMVIELLADGVTVALFAIATFGGIMRFEEQV*
Ga0134122_107301372	3300010400	Terrestrial Soil	MSEMQPLETRERPRRYSALRSTLIGYGVLAFTFFPPTRTLMLWGVGVQVAVILVRQLIERRVSDPATAGTALMVIELLADGVTVALFAIATLGGIMRIAEQV*
Ga0134122_112634411	3300010400	Terrestrial Soil	GRSFGALRSILIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV*
Ga0134123_109484192	3300010403	Terrestrial Soil	MSEMQSREMRQYTALRSALIGYGVLAFTFFPPTRTLMLWGVGVQVAVILVRQLIQRQVRDPALAGTALMVLELVADGVTVALFAIATFGGI
Ga0157306_100032943	3300012912	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVAVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI*
Ga0163163_108312572	3300014325	Switchgrass Rhizosphere	MSETRTRTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI*
Ga0132258_100790865	3300015371	Arabidopsis Rhizosphere	LIGYGVLAFTFFAPGRTLLLWGVGAQIAVIVARKLIERQVRDPAIASQALMVVELLGDGATVLLFAIGTLGGILQVEQQV*
Ga0132258_106236952	3300015371	Arabidopsis Rhizosphere	MRHYAALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRRLIQRQVRDPALAGTALMVLELLADGVTVALFAIATFGGIMRIAEGV*
Ga0184604_103679831	3300018000	Groundwater Sediment	MTEIRPGAAQQRPRSVGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIVVIVVRILIERRVRDPALAAQALTIVELLADAATVALFAFATLGGIMQFEAQI
Ga0190265_105138443	3300018422	Soil	MSEMRSVAVLRSSLIGFGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMVIEHRVRDPAIARQTLTVVELLGDGVTVALFAIATLGGIMQVGAQV
Ga0190272_112871951	3300018429	Soil	MSEMRSVAVLRSTLIGFGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMVIEHRVRDPAIAGQTLTVVELLGDGVTVALFAIGTLGGIMQLGTQV
Ga0190268_103951322	3300018466	Soil	MSEIRSVGALRSTLIGVGVLAFTFFPPTRTLMLWGVGAQVAVILARMLIQRRVSDPAIAGQSLTIVELFGDGVTVALFAIATLGGIMQLGAEV
Ga0190274_104375032	3300018476	Soil	MTEIRPSAAPRRPRSVGALRSALIGYGVLAFTFFPPTRALMLWGVGVQILVMVVRTLIERRVRDPAVATQALTVVELLADGATVALFAFATLGGIMRFEEQV
Ga0190274_104671332	3300018476	Soil	MSEMQSREMRRYTALRSALIGYGVLAFSFFPPTRALMLWGVGVQVAVILVRQLIQRQVRDPALAGTALMVLELVADGVTVALFAIATFGGIMRIQDQV
Ga0190274_125241041	3300018476	Soil	IGFGVLAFTFFPPTRTLMLWGVGVQIAVLLGRMAIEHRVRDRAIAGQALSVVELLGDGVTVALFAIGTLGGIMQLGTQV
Ga0187894_100191374	3300019360	Microbial Mat On Rocks	MSETQRGRALRSALIGYGVLAFTFFPPTRTLMLWGVGAQVAVIFARMLIERRVSDPAVAEHALTVVELLGDGVTVALFAIATLGGIMQLASQV
Ga0190264_102705133	3300019377	Soil	MSGMRSVAVLRSSLIGFGVLAFTIFPPTRTLLLWGVCVQIAVMLGRMVIEHRVRDPAIAGQTLTVLELLGDGVTVALFAMGTLGGIMQLGAQV
Ga0190264_113901101	3300019377	Soil	HMSEIRSVGALRSTLIGIGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMAIEHRVRDPAIARQTLTVVELLGDGVTVALFAIATLGGIMQLGAEV
Ga0247797_10492531	3300023057	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMVARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0247793_10905791	3300023066	Soil	RQHMSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI
Ga0207688_105754712	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0207645_100489991	3300025907	Miscanthus Rhizosphere	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI
Ga0207643_100123273	3300025908	Miscanthus Rhizosphere	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0207681_115588941	3300025923	Switchgrass Rhizosphere	MCEPVGPAGEEPRRDMSETQVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVA
Ga0207701_104296993	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSETRVRGRSFGAFRSTLIGLGVLAFTFFPPGRTLLLWGIAAQIAVILVRRLIERQVRDPAIAAQALTVVELLGDGATV
Ga0207689_117638451	3300025942	Miscanthus Rhizosphere	GEEPRRDMSETQVRGRSFGALRSILIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV
Ga0207676_123537451	3300026095	Switchgrass Rhizosphere	ALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0207683_104239171	3300026121	Miscanthus Rhizosphere	MGGLPWTFCGAIQSRTDRRGSSGLRSALIGYGVLAFTFFPPTRTLMLWGVAVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI
Ga0209814_102587062	3300027873	Populus Rhizosphere	GGEPGLAAVFLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0209481_100188922	3300027880	Populus Rhizosphere	MSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0209481_102594752	3300027880	Populus Rhizosphere	MSEMQSREMRRYGAIRSTLIGYGVLAFAFFPPTRTLMLWGVGVQIATIVAGKLIERRVRDPEIAAKALMLLELVADGVTVALFALATFGGILRFEEQV
Ga0209486_108090901	3300027886	Agricultural Soil	ASRISAERLAAGDSAAAKCVNQSAGRGGASQHMSEIRSVGALRSTLIGFGVLAFTFFPPTRALMLWGVGVQIAVILARMLIERRASDPAIAGQALTVVELLGDGVTVALFAIATLGGIMQLGAEV
Ga0207428_100380442	3300027907	Populus Rhizosphere	MSEMQSREMRHYAALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRRVRDPALASTALTVLELVADGVTVALFAIATLGGIMRIEGQV
Ga0209382_1000375712	3300027909	Populus Rhizosphere	MSEAQVRGRSFAGLRSALIGYGVLAFTFFAPTRTLMLWGVGAQIAVIVARKVVERQVRDPAIAGQALMLIELLGDGATVALFAIATLGGIMGIEQQI
Ga0209382_100113583	3300027909	Populus Rhizosphere	MGVKWGSVRYGYRPNSSRLEIRLRQNVRPMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0209382_109027851	3300027909	Populus Rhizosphere	RARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0209382_111593432	3300027909	Populus Rhizosphere	MSETQVRGRSFAGLRSTLIGYGVLAFTFFPPTRALMLWGVGAQIAVIVARKLVERQVRDPAIAGQALMVIELLGDGATVALFAIATLGGIMGIAQQI
Ga0209382_122747761	3300027909	Populus Rhizosphere	SVGAVRSTLIGYGVLAFTFFPPTRTLMLWGIGVQIAVIVARKLIERQVRDPAMARQALMLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0268265_101784532	3300028380	Switchgrass Rhizosphere	MSETQVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV
Ga0310888_104574511	3300031538	Soil	MGVKWGSVRYGYRPNSSRLEIRLRQNVRPMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIM
Ga0310887_100089022	3300031547	Soil	MSETRTRTLSYGALRSALIGYGVLAFTFFPPTRALMLWGVGVQIALVIARKLVERQIRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0307408_1000621484	3300031548	Rhizosphere	MSEIRSVGALRSTLIGIGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMAIEHRVKDPAIARQTLTVVELLGDGVTVALFAIATLGGIMQLGAEV
Ga0307408_1001200092	3300031548	Rhizosphere	MSEMQPMETRERPRRYTALRSTLIGYGVLAFTLFPPTRTLMLWGVGVQIAVIVLRQLIERRVSDPATAGTALMVLELIGDGVTVALFAIATLGGIMRIAGQV
Ga0307408_1013351122	3300031548	Rhizosphere	MSEIRSVGALRSTLIGIGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMLIEHRVRDPAIARQTLTVVELLGDGVTVALFAIATLGGIMQLGAEV
Ga0307408_1016223232	3300031548	Rhizosphere	RSALIGYGVLAFTFFPPTRALMLWGIGVQVAVILARQLIRRQVRDPALATTALTVLELVADGVTVALFAIATFGGIIRIEDQV
Ga0310886_101513452	3300031562	Soil	MQSREMRQYTALRSALIGYGVLAFTFFPPTRTLMLWGVGVQVAVILVRQLIQRQVRDPALAGTALMVLELVADGATVALFAIATFGGIMQVESQV
Ga0310886_103207773	3300031562	Soil	RQNVRPMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0307406_103950822	3300031901	Rhizosphere	MSEARVRGRSFGALRSTLIGYGVLAFTFFPPSRSLMLWGVGAQVAVILARKLIERRVRDPAIAGQALMLVELLGDGATVALFAIATLGGIMQVEQQV
Ga0307412_101865411	3300031911	Rhizosphere	RYGYRPNGSRLEIRLRQNVRPMSETRSAGISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0307412_119782691	3300031911	Rhizosphere	AGRRGAQRHMSEMQPMETRERPRRYTALRSTLIGYGVLAFTLFPPTRTLMLWGVGVQIAVIVLRQLIERRVSDPATAGTALMVLELIGDGVTVALFAIATLGGIMRIAGQV
Ga0310891_102960881	3300031913	Soil	ISVGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0310885_104763002	3300031943	Soil	MSETRARTLSYGALRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPALAAQVLTLLELLGDGATVALFAIATLGGILRIEQQI
Ga0307409_1016587422	3300031995	Rhizosphere	MQSREMRHYAALRSALIGYGVLAFAFFPPTRTLMLWGIGVQVVVILVRQLIQRRVRDAAMASQALMVLELLADGVTVALFAI
Ga0307416_1002776772	3300032002	Rhizosphere	MPETRRAKMPIEALRSALIGYGVLAFTFFPPTRTLMLWGVVVQVAVIVARKLIERQVRDPAISAQALTVVELLADGVTVALFAIATFGGIMRLEQQI
Ga0307416_1011632083	3300032002	Rhizosphere	GVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAAQTLTLLELLGDGVTVALFAIATLGGILRVEQQI
Ga0307411_114491842	3300032005	Rhizosphere	MSETRTRILSGGALRSALIGYGVLAFTFFPPTRTLLLWGVGVQIALVIARKLVERQVRAPAIAAQALTVLELLGDGATVALFAIATLGGIMGIAQQI
Ga0307411_122241612	3300032005	Rhizosphere	IGIGVLAFTFFPPTRTLMLWGVCVQIAVMLGRMLIEHRVRDPAIARQTLTVVELLGDGVTVALFAIATLGGIMQLGAEV
Ga0310902_110458961	3300032012	Soil	KMCEPVGPAGEEPRRDMSETQVRGRSFGALRSTLIGYGVLAFTFFPPSRRLMLWGVGAQIAVILARMLIERRVRDPAIAGQALTLVELLGDGVTVALFAIATLGGIMQVEQQV
Ga0310906_114307302	3300032013	Soil	LRSALIGYGVLAFTFFPPTRTLMLWGVGVQIALMIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRIEQQI
Ga0310890_109507901	3300032075	Soil	MSETRTRTLSYGALRSALIGYGVLAFTFFPPTRALMLWGVGVQIALVIARKLVERQVRDPAIAGQVLTLLELLGDGATVALFAIATLGGILRVEQQI
Ga0310896_101145441	3300032211	Soil	VGAVRSTLIGYGVLAFTFFPPTRTLMLWGVGVQIAVIVARKLIERQVRDPAMARQALLLLELLGDGATVALFAIATLGGIMQFEQQI
Ga0310812_100069712	3300032421	Soil	MSETRVRGRSFGAFRSTLIGLGVLAFTFFPPGRALLLWGIAAQIAVILVRRLIERQVRDPAIAAQALTVVELLGDGAT
Ga0310810_112071782	3300033412	Soil	MQSREMRQYTALRSALIGYGVLAFTFFPPTRTLMLWGIGVQVAVILVRQLIQRQVRDPALAGTALMVLELVADGVTVALFAIATFGGIMQVESQV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073735

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences