Metagenome / Metatranscriptome Family F073775

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073775
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	72 residues
Representative Sequence	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Number of Associated Samples	88
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.67 %
% of genes near scaffold ends (potentially truncated)	17.50 %
% of genes from short scaffolds (< 2000 bps)	67.50 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (24.167 % of family members)
Environment Ontology (ENVO)	Unclassified (63.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (43.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.49% β-sheet: 0.00% Coil/Unstructured: 48.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01381	HTH_3	15.00
PF00202	Aminotran_3	14.17
PF02769	AIRS_C	4.17
PF00551	Formyl_trans_N	3.33
PF01522	Polysacc_deac_1	2.50
PF13470	PIN_3	1.67
PF00534	Glycos_transf_1	0.83
PF02548	Pantoate_transf	0.83
PF04138	GtrA	0.83
PF00903	Glyoxalase	0.83
PF01042	Ribonuc_L-PSP	0.83
PF03576	Peptidase_S58	0.83
PF00586	AIRS	0.83
PF01402	RHH_1	0.83
PF13450	NAD_binding_8	0.83
PF08570	DUF1761	0.83
PF02569	Pantoate_ligase	0.83
PF00326	Peptidase_S9	0.83
PF02245	Pur_DNA_glyco	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	2.50
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.67
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.83
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.83
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.83
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
All Organisms	root	All Organisms	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
cellular organisms	root	All Organisms → cellular organisms	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.33 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20.83 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	20.83 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20.83 %
unclassified Patescibacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	5.00 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.83 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	5.00 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001398\|JGI20207J14881_1003332	All Organisms → cellular organisms → Bacteria	5160	Open in IMG/M
3300001401\|JGI20189J14885_1033485	Not Available	674	Open in IMG/M
3300001593\|JGI12635J15846_10362290	Not Available	886	Open in IMG/M
3300004092\|Ga0062389_100100989	Not Available	2553	Open in IMG/M
3300004635\|Ga0062388_101922574	Not Available	610	Open in IMG/M
3300005591\|Ga0070761_10055675	Not Available	2230	Open in IMG/M
3300005602\|Ga0070762_10638678	Not Available	710	Open in IMG/M
3300005712\|Ga0070764_10288375	Not Available	944	Open in IMG/M
3300006176\|Ga0070765_102181808	Not Available	517	Open in IMG/M
3300009519\|Ga0116108_1018515	All Organisms → cellular organisms → Bacteria → Acidobacteria	2422	Open in IMG/M
3300009623\|Ga0116133_1005867	All Organisms → cellular organisms → Bacteria	3088	Open in IMG/M
3300009628\|Ga0116125_1005184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3887	Open in IMG/M
3300009630\|Ga0116114_1089657	Not Available	827	Open in IMG/M
3300009636\|Ga0116112_1046925	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300009644\|Ga0116121_1002760	All Organisms → cellular organisms → Bacteria	6634	Open in IMG/M
3300009762\|Ga0116130_1242544	Not Available	573	Open in IMG/M
3300010343\|Ga0074044_10526121	Not Available	772	Open in IMG/M
3300010343\|Ga0074044_10709252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	657	Open in IMG/M
3300014156\|Ga0181518_10113065	Not Available	1500	Open in IMG/M
3300014160\|Ga0181517_10041807	All Organisms → cellular organisms → Bacteria → Acidobacteria	2883	Open in IMG/M
3300014160\|Ga0181517_10206458	Not Available	1071	Open in IMG/M
3300014160\|Ga0181517_10518302	Not Available	602	Open in IMG/M
3300014161\|Ga0181529_10091872	Not Available	1960	Open in IMG/M
3300014161\|Ga0181529_10642231	Not Available	551	Open in IMG/M
3300014199\|Ga0181535_10000298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	76104	Open in IMG/M
3300014199\|Ga0181535_10004509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15439	Open in IMG/M
3300014200\|Ga0181526_10717959	Not Available	630	Open in IMG/M
3300014491\|Ga0182014_10024453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4935	Open in IMG/M
3300014492\|Ga0182013_10121194	Not Available	1712	Open in IMG/M
3300014496\|Ga0182011_10076016	Not Available	2356	Open in IMG/M
3300014501\|Ga0182024_10001048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	71739	Open in IMG/M
3300014501\|Ga0182024_10115760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3852	Open in IMG/M
3300014654\|Ga0181525_10442816	Not Available	716	Open in IMG/M
3300014654\|Ga0181525_10742466	Not Available	552	Open in IMG/M
3300016750\|Ga0181505_11012602	Not Available	520	Open in IMG/M
3300017931\|Ga0187877_1025311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	3085	Open in IMG/M
3300017931\|Ga0187877_1086477	Not Available	1333	Open in IMG/M
3300017935\|Ga0187848_10124036	Not Available	1156	Open in IMG/M
3300017935\|Ga0187848_10151549	Not Available	1020	Open in IMG/M
3300017935\|Ga0187848_10297219	Not Available	674	Open in IMG/M
3300017940\|Ga0187853_10316797	Not Available	702	Open in IMG/M
3300017941\|Ga0187850_10112341	Not Available	1309	Open in IMG/M
3300017942\|Ga0187808_10257711	Not Available	781	Open in IMG/M
3300017946\|Ga0187879_10010913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	5797	Open in IMG/M
3300017946\|Ga0187879_10160662	Not Available	1268	Open in IMG/M
3300017946\|Ga0187879_10669601	Not Available	577	Open in IMG/M
3300017948\|Ga0187847_10101084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1591	Open in IMG/M
3300017948\|Ga0187847_10202537	Not Available	1082	Open in IMG/M
3300017975\|Ga0187782_10045299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	3203	Open in IMG/M
3300017975\|Ga0187782_10204286	Not Available	1478	Open in IMG/M
3300017988\|Ga0181520_10006095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18699	Open in IMG/M
3300017988\|Ga0181520_10007887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15404	Open in IMG/M
3300017988\|Ga0181520_10031045	Not Available	5606	Open in IMG/M
3300017988\|Ga0181520_10559956	Not Available	799	Open in IMG/M
3300017996\|Ga0187891_1008446	All Organisms → cellular organisms → Bacteria	5771	Open in IMG/M
3300018002\|Ga0187868_1294056	Not Available	537	Open in IMG/M
3300018012\|Ga0187810_10128180	Not Available	1010	Open in IMG/M
3300018019\|Ga0187874_10225908	Not Available	773	Open in IMG/M
3300018022\|Ga0187864_10512190	Not Available	500	Open in IMG/M
3300018024\|Ga0187881_10065747	Not Available	1709	Open in IMG/M
3300018030\|Ga0187869_10306846	Not Available	763	Open in IMG/M
3300018030\|Ga0187869_10524096	Not Available	562	Open in IMG/M
3300018034\|Ga0187863_10678792	Not Available	581	Open in IMG/M
3300018035\|Ga0187875_10562234	Not Available	603	Open in IMG/M
3300018038\|Ga0187855_10258866	Not Available	1020	Open in IMG/M
3300018038\|Ga0187855_10275589	Not Available	985	Open in IMG/M
3300018038\|Ga0187855_10451929	Not Available	748	Open in IMG/M
3300018043\|Ga0187887_10413240	Not Available	796	Open in IMG/M
3300018044\|Ga0187890_10679882	Not Available	581	Open in IMG/M
3300018047\|Ga0187859_10806694	Not Available	539	Open in IMG/M
3300018057\|Ga0187858_10094578	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300019787\|Ga0182031_1045195	Not Available	2340	Open in IMG/M
3300019788\|Ga0182028_1088729	Not Available	1118	Open in IMG/M
3300021181\|Ga0210388_10037391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4018	Open in IMG/M
3300021181\|Ga0210388_10201649	Not Available	1741	Open in IMG/M
3300021402\|Ga0210385_10380007	Not Available	1059	Open in IMG/M
3300021402\|Ga0210385_10922208	Not Available	671	Open in IMG/M
3300021404\|Ga0210389_10211515	Not Available	1514	Open in IMG/M
3300021477\|Ga0210398_10032435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4367	Open in IMG/M
3300022524\|Ga0224534_1024553	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300023068\|Ga0224554_1000655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27099	Open in IMG/M
3300023088\|Ga0224555_1000198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	88259	Open in IMG/M
3300023090\|Ga0224558_1038861	Not Available	2068	Open in IMG/M
3300023090\|Ga0224558_1163071	Not Available	703	Open in IMG/M
3300025434\|Ga0208690_1008286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2266	Open in IMG/M
3300025574\|Ga0208717_1030116	Not Available	1390	Open in IMG/M
3300025664\|Ga0208849_1000568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33645	Open in IMG/M
3300025703\|Ga0208357_1104946	Not Available	834	Open in IMG/M
3300027676\|Ga0209333_1081789	Not Available	884	Open in IMG/M
3300027853\|Ga0209274_10147556	Not Available	1183	Open in IMG/M
3300027867\|Ga0209167_10811619	Not Available	509	Open in IMG/M
3300027879\|Ga0209169_10625766	Not Available	561	Open in IMG/M
3300027908\|Ga0209006_10684256	Not Available	841	Open in IMG/M
3300028573\|Ga0265334_10294475	Not Available	556	Open in IMG/M
3300028653\|Ga0265323_10249883	Not Available	552	Open in IMG/M
3300028800\|Ga0265338_10302260	Not Available	1163	Open in IMG/M
3300028800\|Ga0265338_10307212	Not Available	1151	Open in IMG/M
3300029817\|Ga0247275_1034064	Not Available	1512	Open in IMG/M
3300029999\|Ga0311339_11964419	Not Available	502	Open in IMG/M
3300030813\|Ga0265750_1052614	Not Available	620	Open in IMG/M
3300030878\|Ga0265770_1029877	Not Available	907	Open in IMG/M
3300031235\|Ga0265330_10046562	Not Available	1911	Open in IMG/M
3300031344\|Ga0265316_11266483	Not Available	509	Open in IMG/M
3300031708\|Ga0310686_108224304	Not Available	767	Open in IMG/M
3300031708\|Ga0310686_108244073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9418	Open in IMG/M
3300031708\|Ga0310686_109920276	Not Available	932	Open in IMG/M
3300031708\|Ga0310686_109991050	Not Available	851	Open in IMG/M
3300031708\|Ga0310686_119345849	All Organisms → cellular organisms → Bacteria → Acidobacteria	3428	Open in IMG/M
3300031711\|Ga0265314_10192662	Not Available	1212	Open in IMG/M
3300031718\|Ga0307474_10000980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20733	Open in IMG/M
3300032805\|Ga0335078_10679115	Not Available	1281	Open in IMG/M
3300032805\|Ga0335078_12390318	Not Available	550	Open in IMG/M
3300032829\|Ga0335070_10432200	Not Available	1256	Open in IMG/M
3300032895\|Ga0335074_10050700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5714	Open in IMG/M
3300032895\|Ga0335074_10569740	Not Available	1144	Open in IMG/M
3300032896\|Ga0335075_10043784	Not Available	6298	Open in IMG/M
3300033402\|Ga0326728_10013664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17553	Open in IMG/M
3300033402\|Ga0326728_10018942	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13452	Open in IMG/M
3300033402\|Ga0326728_10068404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4765	Open in IMG/M
3300033405\|Ga0326727_10033228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9018	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.50%
Aquatic	Environmental → Aquatic	46.67%
Plants	Host-Associated → Plants	5.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.67%
Soil	Environmental → Terrestrial → Soil	39.17%
Peat	Environmental → Terrestrial → Peat	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	46.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	38.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	24.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	12.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.00%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.17%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.17%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.33%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.67%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20207J14881_10033322	3300001398	Arctic Peat Soil	MNSLYRSRDPKIRRLLALSNFSLVLGLLPWVFREYIPFHHGWVDAFCGFFIGLSITVNLYCLRAARRSRETRA*
JGI20189J14885_10334851	3300001401	Arctic Peat Soil	MNPLYRSRDPRIRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFSGFFIGISIGMNLYCLRVARRCRETRA*
JGI12635J15846_103622902	3300001593	Forest Soil	MNSLYRSRDPRIRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFCGFFIGISITMNLYCLRAARHCRETRA*
Ga0062389_1001009892	3300004092	Bog Forest Soil	MNSLYRSRDPKMRRLLAIANFSLVFGLLPWVFRDSIPFNHNWLDAFCGFFVGISLAVNLYCLRAGRRCRETRA*
Ga0062388_1019225742	3300004635	Bog Forest Soil	SLYRSRDPKMRRLLAIANFSLVFGLLPWVFRDSIPFNHNWLDAFCGFFVGISLAVNLYCLRAGRRCRETRA*
Ga0070761_100556753	3300005591	Soil	MHPLSRRLDPKFRRLFQIANIAFVLGALPWAFRESIHANHAWLDPFCGFFLGLSVTIYLCCLRAAHRYRQDQTQG*
Ga0070762_106386782	3300005602	Soil	MNPLYRSRDPKVRRLLAIANFSLVLGLLPWVFRDSMHFDHNWVDAFCGFFIGISITVNLYCLRAARRCRETQA*
Ga0070764_102883752	3300005712	Soil	MNPLYRSRDPRTRRLLAIANFSLVFGLLPWVFREYVPFNHNWLDAFCGVFIGISITLNLYCLRAARRCRETRA*
Ga0070765_1021818081	3300006176	Soil	MNPLYRSRDPKVRRLLAIANFSLILGLLPWIFRDSIHFNHNWVDAFCGFFIGISITVNLYCLRAARRCRETQA*
Ga0116108_10185154	3300009519	Peatland	DQKHRRLFQIANVALVLGLVPWVFREYVTVNHDWLDAWCGFFLGLSVTINLACLRAARRCPRTQA*
Ga0116133_10058674	3300009623	Peatland	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI*
Ga0116125_10051847	3300009628	Peatland	MHASFRRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI*
Ga0116114_10896571	3300009630	Peatland	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI*
Ga0116112_10469251	3300009636	Peatland	RRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI*
Ga0116121_10027603	3300009644	Peatland	MYSLISRLDQKHRRLFQIANVALVLGLVPWVFREYVTVNHDWLDAWCGFFLGLSVTINLACLRAARRCPRTQA*
Ga0116130_12425442	3300009762	Peatland	YRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI*
Ga0074044_105261212	3300010343	Bog Forest Soil	FSRLDQKYRRLFQVANVALVLGLVPWVFRESITVNHNWLDAWCGFFLGLSVTINLVCLRAARRCPRTQA*
Ga0074044_107092521	3300010343	Bog Forest Soil	MPEPEKEYSNMSPPYRSRSPKVRRLLAIANFSLVLGLLPWIFRAYIHVSHNWLDAFCGFFLGLSITVNLYCIRAARRCREPQI*
Ga0181518_101130652	3300014156	Bog	MHALYRRLDPKHRRLFAIANAALILGLLPWVFRDSIHVDHDWLDAFCGFFLGLNITINLFCLRAARRCRPDGI*
Ga0181517_100418075	3300014160	Bog	MHALYRRLDSKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI*
Ga0181517_102064582	3300014160	Bog	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI*
Ga0181517_105183021	3300014160	Bog	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCLPNGI*
Ga0181529_100918725	3300014161	Bog	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSITINLFCLRAA
Ga0181529_106422311	3300014161	Bog	MHALYRRLDSKHRRLLQLANFSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPDGV*
Ga0181535_1000029871	3300014199	Bog	MHSLMNRLDQKHRRLFQIANIALILGLVPWVFRESITVNHDWLDAWCGFFMGLSITINLVCLRAARRCPRTEA*
Ga0181535_1000450916	3300014199	Bog	MYALSRRLNQKHRRLFQLANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSITINLFCLRAARRCREDGV*
Ga0181526_107179591	3300014200	Bog	MNLHYRPRDPKTRRLLAIANFSLVLGLLPWIFREYIHVSHNWLDASRGFFIGLSITVNLWALRRARRCSAG*
Ga0182014_100244535	3300014491	Bog	MHALYRRFDPKHRRLFQIANFSLVLGLLPWVFRDSIHFNHDWLDAFCGFFLGLSIAINLFCLRAARRCRPDQI*
Ga0182013_101211942	3300014492	Bog	MHPLYRRLNSKHRRLFQIANVALVLGLLPWTFRESIHFNRDWLDAFCGFFMGLSITIMLFCLRAARCCRENHI*
Ga0182011_100760163	3300014496	Fen	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSVTINLFCLRAARRCRSDGI*
Ga0182024_1000104837	3300014501	Permafrost	MNPLYRSRDPKIRRMLAVANFSLVIGLLPWIFRESIPFNHNWLDASCGFFIGISIAVNLYCLRAARRCSETRA*
Ga0182024_101157605	3300014501	Permafrost	MHPIFSRLDQKHRRLFQIANIALVLGLVPWVFRESITVNHDWLDAWCGFFLGLSVTISLVCLRAARRCRQDGV*
Ga0181525_104428161	3300014654	Bog	MHASFRRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGV*
Ga0181525_107424662	3300014654	Bog	MHPMLSRLDEKHRRLFRIANVALILGLVPWVFRESITVNHDWLDAWCGFFMGLSITINLVCLRAARRCTRTQA*
Ga0181505_110126021	3300016750	Peatland	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCLPNGI
Ga0187877_10253113	3300017931	Peatland	MYSLISRLDQKHRRLFQIANVALVLGLVPWVFREYVTVNHDWLDAWCGFFLGLSVTINLACLRAARRCPRTQA
Ga0187877_10864774	3300017931	Peatland	MHALYRRLDSKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187848_101240362	3300017935	Peatland	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI
Ga0187848_101515492	3300017935	Peatland	MHPMYRRLDPKHRRLLAIANAALVLGLVPWIFRGPIHFNHDWLDAFCGFFMGLSITVNLYCLRAARRCRDEQRI
Ga0187848_102972191	3300017935	Peatland	IGVSFMHPLYRRLDPKHRRLFQIANLSLVLGLVPWIFRDSITFNHNWLDAFCGFFIGLSITINLCCLRAARRCGEIHS
Ga0187853_103167972	3300017940	Peatland	MHTLYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI
Ga0187850_101123415	3300017941	Peatland	MHASFRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSVTINLFCL
Ga0187808_102577111	3300017942	Freshwater Sediment	MHSLFRRLGLKHRLLFGLANAALVLGLTPWIFRESIPVNHDWLDAFCGFFLGLSITISVFCLRASRRCREPQ
Ga0187879_100109138	3300017946	Peatland	MHALYRRLDSKHRRLLQLANFSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI
Ga0187879_101606621	3300017946	Peatland	LHYRPRDPKTRRLLAIANFSLVLGLLPWIFREYIHVSHNWLDASRGFFIGLSITVNLWALRRARRCSAG
Ga0187879_106696012	3300017946	Peatland	LDSKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187847_101010842	3300017948	Peatland	MNLHYRPRDPKTRRLLAIANFSLVLGLLPWIFREYIHVSHNWLDASRGFFIGLSITVNLWALRRARRCSAG
Ga0187847_102025373	3300017948	Peatland	MHASFRRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187782_100452995	3300017975	Tropical Peatland	MHPLYRRLDRRHRRLFALANAAMVLGLTPLIFRESIPVNHNWLDGLCGFFMGLNITINVYCLRAARNCGRDRA
Ga0187782_102042861	3300017975	Tropical Peatland	MRPLYPGLNQQQRRLFIIANVSLILGLAPWIFRQFIPVNHDWLDAFSGFFIGLNVTINLFCLRAARRCGQPEI
Ga0181520_1000609522	3300017988	Bog	MHSLMNRLDQKHRRLFQIANIALILGLVPWVFRESITVNHDWLDAWCGFFMGLSITINLVCLRAARRCPRTEA
Ga0181520_100078878	3300017988	Bog	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0181520_100310452	3300017988	Bog	MYALSRRLNQKHRRLFQLANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSITINLFCLRAARRCREDGV
Ga0181520_105599561	3300017988	Bog	MHASFRRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAA
Ga0187891_10084465	3300017996	Peatland	MHPLHRHLDSKRRRLFQIANLSLVLGLVPWIFRDSIHVNHNWFDAFCGFFMGLSITINLFCLRSARHCREEQT
Ga0187868_12940561	3300018002	Peatland	MYSLISRLDQKHRRLFQIANLSLVLGLVPWIFRDSITFNHNWLDAFCGFFIGLSITINLC
Ga0187810_101281803	3300018012	Freshwater Sediment	MHPLYRRLDQKHRRLFAFANAALVLGLLPWIFREYISINRDWLDALCGIFLGLNVTINIFCLRAARRCPPDEI
Ga0187874_102259081	3300018019	Peatland	MHASFRRLDPKHRRLLQLANFSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI
Ga0187864_105121902	3300018022	Peatland	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187881_100657473	3300018024	Peatland	MHASFRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPNGI
Ga0187869_103068461	3300018030	Peatland	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPDGI
Ga0187869_105240961	3300018030	Peatland	QMHASFRRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187863_106787921	3300018034	Peatland	KHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187875_105622342	3300018035	Peatland	MHPLFSRLDQKHRRLFQIANAALVLGLVPWVFREYVTVNHDWLDAWCGFFLGLSVTINLVCLRAARRCRPDGV
Ga0187855_102588664	3300018038	Peatland	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSVTINLFCLRAA
Ga0187855_102755892	3300018038	Peatland	MCVPINQRDPKTRRLFQIANFSLVLGLLPWIFRQYIHVDHNWLDAFCGFFIGLNLTINLCCLRAARRCRTQEQR
Ga0187855_104519291	3300018038	Peatland	ESSMHALYRRLDSKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0187887_104132402	3300018043	Peatland	MHPLYRRLNSKHRRLFQIANVALVLGLLPWTFRESIHFNHDWLDAFCGFFLSLSVTINLCCLRAGRQCRESQI
Ga0187890_106798821	3300018044	Peatland	KHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTISLFCLRAARRCRPDGI
Ga0187859_108066942	3300018047	Peatland	MHPMFSRLDQRHRRLFQIANVALVLGLLPWVFRESITVNHDWLDAWCGFFLGLSVTINLVCLRAARRCSRTQA
Ga0187858_100945782	3300018057	Peatland	MHASYRRLDPKHRRLLQLANLSLVLGLTPWIFRESITFNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0182031_10451952	3300019787	Bog	MHPIFIRLDQKHRRLFRIANVALILGLVPWVFREYIHFNHNWLDAFCGFFMGLYITIMLFSLRAARRCRPNGV
Ga0182028_10887293	3300019788	Fen	MHALYRRFDPKHRRLFQIANFSLVLGLLPWVFRDSIHFNHDWLDAFCGFFLGLSIAINLFCLRAARRCRPDQI
Ga0210388_100373913	3300021181	Soil	MNPLYRSCDPKVRRLLAIANFSLILGLLPWIFRDSIHFNHNWLDAFCGFFIGISITVNLYCVRAARRCRETQA
Ga0210388_102016492	3300021181	Soil	MNPLYRSRDPRTRRLLAIANFSLVFGLLPWVFREYVPFNHNWLDAFCGVFIGISITLNLYCLRAARRCRETRA
Ga0210385_103800072	3300021402	Soil	MNPLYRSRDPKVRRLLAIANFSLVLGLLPWIFRNSIHFNHNWVDAFCGFFIGISITVNLYCVRAARRCRETQA
Ga0210385_109222083	3300021402	Soil	MNLLIKSRDPKVRRLLAIANFSLVLGLLPWIFRENINFNHDWLDAFCGFFIGISITVNLF
Ga0210389_102115154	3300021404	Soil	MSPLYRSRDPKVRRLLAIANFSLVLGLLPWIFRNSIHFNHNWVDAFCGFFIGISITVNLYCLRAARRCRETQA
Ga0210398_100324355	3300021477	Soil	MNPLYRSRDPKIRRLLAIANLSLVLGLLPLVFRESMHFNHNWVDAFCGFFIGISVTVNLYCLRAARRCRETQA
Ga0224534_10245532	3300022524	Soil	MHALYRRLDPKHRRLLQLANLALVLGLMPWIFREYITFNHNWLDAFCGFFLGLSITINLCCLRAARRCRPEEV
Ga0224554_100065518	3300023068	Soil	MHALYRRLDPKHRRLFELANVSLVLGLTPWIFREYFPVNHNWLDAFCGFFLGLSVTINLFCLRAARRCRSDGI
Ga0224555_100019823	3300023088	Soil	MHLLYRRLDQKHRRLFQIANFSLVLGLLPWVFREYIPVNHNWLDAFCGFFLGLSITINLFCLRVARRCRPDGV
Ga0224558_10388615	3300023090	Soil	MHALYRRLDPKHRRLLQLANLALVLGLMPWIFREYITFNHNWLDAFCGFFLGLSITINLCCLRAACRCRPEEV
Ga0224558_11630713	3300023090	Soil	MHPMFSRLDQKHRRLFRIANVALILGLVPWVFREYITFNHNWLDAFCGFFMGLYITIMLFCLRAARRCRPNGV
Ga0208690_10082863	3300025434	Peatland	MHASYRRLDPKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDGI
Ga0208717_10301162	3300025574	Arctic Peat Soil	MNSLYRSRDPKIRRLLALSNFSLVLGLLPWVFREYIPFHHGWVDAFCGFFIGLSITVNLYCLRAARRSRETRA
Ga0208849_10005683	3300025664	Arctic Peat Soil	MNPLYRSRDPRIRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFSGFFIGISIGMNLYCLRVARRCRETRA
Ga0208357_11049462	3300025703	Arctic Peat Soil	MNPLYRSRDPRIRRLLAIANFSLVIALLPWVFREYMPVNHNWVDAFCGFFIGISITVNLYCLRAGRRRETRA
Ga0209333_10817892	3300027676	Forest Soil	MNSLYRSRDPRIRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFCGFFIGISITMNLYCLRAARHCRETRA
Ga0209274_101475562	3300027853	Soil	MHPLSRRLDPKFRRLFQIANIAFVLGALPWAFRESIHANHAWLDPFCGFFLGLSVTIYLCCLRAAHRYRQDQTQG
Ga0209167_108116191	3300027867	Surface Soil	MHPLYRRLDPRHRRLFQIANFSLILGLVPWVFREYFPVNHNWLDAWCGFFMGLSVTINLFCLRAARRCPRTQA
Ga0209169_106257662	3300027879	Soil	MNSLYRSRDPKVRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFCGFFIGISITVNLYCLRTARRCRGTRA
Ga0209006_106842561	3300027908	Forest Soil	MTNLLHSVWTRLCTNARDPKIRRLLAIANFSLVFGLLPWIFRESIPFNHNWLDAICGFFIGISIAVNLYCLRAGRGCRETQA
Ga0265334_102944752	3300028573	Rhizosphere	MHALYRRLDPKNRRLLQLANLFLVLGMTPWIFREYITFNHNWLDALCGFFLGLSIAINLCCMRAARRCRPDEV
Ga0265323_102498832	3300028653	Rhizosphere	MHPLFSRLDEKHRRLFQIANVALVLGLVPWIFRESITVNHNWLDAWCGFCMGLSVAINMVCLRAARHCPRTQA
Ga0265338_103022604	3300028800	Rhizosphere	MHPMFSRLDQKHRRLFRIANVALILGLVPWVFRESITVNHDWLDAWCGFFMGLSVTINLVCLRAARRCPRTQA
Ga0265338_103072122	3300028800	Rhizosphere	MHPMYRRFDPKHRRLLQLANLSLVLGLTPWIFREYITFNHNWLDASCGFFLGLSIAINLCCLRAARRCREHQI
Ga0247275_10340645	3300029817	Soil	MHALYRRLDSKHRRLLQLANFSLVLGLTPWIFRESITLNHNWLDAFCGFFLGLSVTINLFCLRAARRCRPDG
Ga0311339_119644192	3300029999	Palsa	MNPLYRSRDPKVRRLLAIANFSLVLGLLPWIFREYIHIDHNWLDAFCGFFMGISITVNLYCLRACRRCREMQA
Ga0265750_10526141	3300030813	Soil	NEVFRGGSTEPEKENLKMNPLYRSRDPRIRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFCGFFIGISITMNLYCLRAARHCRETRA
Ga0265770_10298773	3300030878	Soil	MNSLYRSRDPKMRRLLAIANFSLVLGLLPWIFREYIHTGHIWIDAFCGFFIGISITVNLYCLRAARRCRETRA
Ga0265330_100465623	3300031235	Rhizosphere	MHPMYRRFDPKHRRLLQLANLSLVLGLTPWIFREYITFNHNWLDASCGFFLGLSIAINLCCLRAARRCRENQI
Ga0265316_112664831	3300031344	Rhizosphere	MHPMYRRFDPKHRRLLQLANLSLVLGLTPWIFREYITFNHNWLDASCGFFLGLSIAINLCCLRAARRCRPEGF
Ga0310686_1082243042	3300031708	Soil	MQNTNSDPEHDEDFCSGTTEQEKEDLKMNSLNRSRDPRTRRLLAIANFSLVLGLLPWVFREYIPFNHNWVDAFCGLFIGISITVNLYCLRAARRCRETQA
Ga0310686_1082440739	3300031708	Soil	MHRMFSRLDQKHRRLFQIANIALVLGLVPWVFRESITVNHDWLDAWCGFFLGLAVTINLVCLRAARRCRQDGV
Ga0310686_1099202761	3300031708	Soil	MNSLYRSRDPKIRRLLAIANFSLAFGLLPWVFREYIPFNHNWVDALCGFFIGISITMNLYCLRAARRCRETQA
Ga0310686_1099910501	3300031708	Soil	MNPLYRSRDPKVRRLLAIANFSLVFGLLPWVFRDYIPFNHNWVDAFCGFFIGISITMNLYCFRAARRCRETQA
Ga0310686_1193458491	3300031708	Soil	MNSLHRSRDPRTRRLLAIANFSLVFGLLPWVFREYIPFNHNWLDAFCGVFIGISITVNLYCLRAARRCRETQV
Ga0265314_101926621	3300031711	Rhizosphere	MHALYRRLDPKHRRLLQLANLSLVFGLLPWTFREYITFNHNWLDAFCGFFLGLSIAINLCCLRAAHRCREQQV
Ga0307474_1000098018	3300031718	Hardwood Forest Soil	MNPLYRSRDPKVRRLLAIANFSLILGLLPWIFRDSIHFNHNWVDAFCGFFIGISITVNLYCLRAARRCRETQA
Ga0335078_106791152	3300032805	Soil	MSPLDRSRSPKVRRLLAIANFSLVLGLLPWIFREYIHVSHNWLDASCGFFLGLSITINLYCVRAARRFWPGGT
Ga0335078_123903182	3300032805	Soil	MRTLYRRLDSKHRRLLQLANLSLVLGLMPWIFRESISFNHNWLDAFCGFFLGLSITINLFCLRAARRCPRTQE
Ga0335070_104322003	3300032829	Soil	MQLLIHRLDSKHRRLFQIANAALVLGLLPWIFREYIPMNHNWLDAFCGFCMGLSVTINLFCLRAARRCQNTQA
Ga0335074_100507003	3300032895	Soil	MHPLYRRLNPKQRRLFKIANAALVLGLAPWIFRESIHFNHDWLDAFCGFFLGLSITINLLCLRAARRCQEHRM
Ga0335074_105697404	3300032895	Soil	MHPLYRRLDRKHRRLFRIANIALILGLAPWIFRESIHVNHDWLDAYFGFCMGLYITISLFCLRAARRCREPQI
Ga0335075_100437845	3300032896	Soil	MHPLYRRLNPKQRRLFKIANAALVLGLAPWIFRESIHFNHDWLDAFCGFFLGLYITINLFCLRAARGCRERQM
Ga0326728_100136646	3300033402	Peat Soil	MHLWYRRLDLKSRRLFQIANFSLVLGLTPWIFREYIPVNHNWLDAFCGFFLGLSITINLYCLCAARRCLPALDLK
Ga0326728_100189428	3300033402	Peat Soil	MHALFSRLDQKHRRLFQIANAALVLGLVPWVFREYVTVNHDWLDAWCGFFLGLSVTINLVCLRAARRCRPDGV
Ga0326728_100684042	3300033402	Peat Soil	MHSIYRRLDPKFRRLFQLANLALVLGLLPWVFRESIPANHAWLDAFCGFFMGLSIAINLFCLRAARRRTSADSPTC
Ga0326727_1003322810	3300033405	Peat Soil	MHLWYRRLDLKSRRLFQIANFSLVLGLTPWIFREYIPVNHNWLDAFCGFFLGLSITINLYCLCAARRCLPGLDLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073775

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences