Metagenome / Metatranscriptome Family F073792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073792
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	92 residues
Representative Sequence	LVVYGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDINPQAPDAWILVYRWADGTPLGGVQGPLTGNGARTFRSVPPC
Number of Associated Samples	104
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.13 %
% of genes near scaffold ends (potentially truncated)	92.50 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 23.33% Coil/Unstructured: 76.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00196	GerE	6.67
PF01494	FAD_binding_3	6.67
PF00890	FAD_binding_2	5.83
PF00877	NLPC_P60	5.00
PF08044	DUF1707	3.33
PF14310	Fn3-like	3.33
PF12831	FAD_oxidored	2.50
PF01042	Ribonuc_L-PSP	2.50
PF01565	FAD_binding_4	2.50
PF04525	LOR	2.50
PF00106	adh_short	1.67
PF09084	NMT1	1.67
PF13466	STAS_2	1.67
PF08450	SGL	1.67
PF01909	NTP_transf_2	1.67
PF03486	HI0933_like	1.67
PF00296	Bac_luciferase	1.67
PF10604	Polyketide_cyc2	1.67
PF02604	PhdYeFM_antitox	0.83
PF14437	MafB19-deam	0.83
PF08281	Sigma70_r4_2	0.83
PF05977	MFS_3	0.83
PF02705	K_trans	0.83
PF13302	Acetyltransf_3	0.83
PF02594	DUF167	0.83
PF01757	Acyl_transf_3	0.83
PF13700	DUF4158	0.83
PF00291	PALP	0.83
PF02702	KdpD	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	16.67
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	8.33
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	6.67
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	6.67
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	5.00
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	3.33
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.50
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	2.50
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	1.67
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	1.67
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	1.67
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.67
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	1.67
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	1.67
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.67
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	1.67
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.67
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	1.67
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.67
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.67
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	1.67
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.67
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	0.83
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.83
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.83
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.83
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.83
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.50 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.50 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	76.67 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	66.67 %
Unclassified	root	N/A	5.83 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	66.67 %
Unclassified	root	N/A	5.83 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	66.67 %
Unclassified	root	N/A	5.83 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Ancrocorticia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Ancrocorticia	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	66.67 %
Unclassified	root	N/A	5.83 %
Blastococcus endophyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus endophyticus	0.83 %
Ancrocorticia populi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Ancrocorticia → Ancrocorticia populi	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459023\|GZGNO2B02GKBLV	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300001867\|JGI12627J18819_10206679	Not Available	792	Open in IMG/M
3300003219\|JGI26341J46601_10193951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300004080\|Ga0062385_10215904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300004091\|Ga0062387_100081976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1674	Open in IMG/M
3300004092\|Ga0062389_100577765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300004092\|Ga0062389_100921845	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300004092\|Ga0062389_104257904	Not Available	538	Open in IMG/M
3300004092\|Ga0062389_104411929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300004635\|Ga0062388_100882268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300004635\|Ga0062388_101151881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300005534\|Ga0070735_10366562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300005610\|Ga0070763_10517797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300006052\|Ga0075029_100477132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300006176\|Ga0070765_101102795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300009520\|Ga0116214_1112003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300009630\|Ga0116114_1054574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300009632\|Ga0116102_1008845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3743	Open in IMG/M
3300009637\|Ga0116118_1059509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1341	Open in IMG/M
3300009698\|Ga0116216_10404934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300009698\|Ga0116216_10920962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300009700\|Ga0116217_10323502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988	Open in IMG/M
3300009764\|Ga0116134_1057773	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300010876\|Ga0126361_10402974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2218	Open in IMG/M
3300014491\|Ga0182014_10057428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2613	Open in IMG/M
3300014493\|Ga0182016_10583008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300014658\|Ga0181519_11044166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300014838\|Ga0182030_10125768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3386	Open in IMG/M
3300016371\|Ga0182034_11727689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300017821\|Ga0187812_1152611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300017924\|Ga0187820_1175303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300017926\|Ga0187807_1042895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1401	Open in IMG/M
3300017928\|Ga0187806_1352020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300017931\|Ga0187877_1088140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1316	Open in IMG/M
3300017932\|Ga0187814_10027964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Ancrocorticia → Ancrocorticia populi	2105	Open in IMG/M
3300017955\|Ga0187817_10292140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1039	Open in IMG/M
3300017973\|Ga0187780_10316279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300017975\|Ga0187782_10355206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300017995\|Ga0187816_10550249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300017999\|Ga0187767_10328986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300018008\|Ga0187888_1100941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1229	Open in IMG/M
3300018025\|Ga0187885_10261204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300018033\|Ga0187867_10414721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300018035\|Ga0187875_10345656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	800	Open in IMG/M
3300018040\|Ga0187862_10590717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300018043\|Ga0187887_10355010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300018043\|Ga0187887_10590941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300018046\|Ga0187851_10504752	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018058\|Ga0187766_11110741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300018062\|Ga0187784_10261642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300018062\|Ga0187784_10636940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300020579\|Ga0210407_11346808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300020580\|Ga0210403_11497035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300020581\|Ga0210399_10448179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300020581\|Ga0210399_10462076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300021180\|Ga0210396_11399456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300021180\|Ga0210396_11660885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300021388\|Ga0213875_10315442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300021403\|Ga0210397_10183799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1484	Open in IMG/M
3300021403\|Ga0210397_11374985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300021474\|Ga0210390_10553667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	967	Open in IMG/M
3300021474\|Ga0210390_10883192	Not Available	736	Open in IMG/M
3300021474\|Ga0210390_11215981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300022521\|Ga0224541_1012884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300025576\|Ga0208820_1043033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1306	Open in IMG/M
3300025634\|Ga0208589_1098989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300025915\|Ga0207693_11025997	Not Available	629	Open in IMG/M
3300027096\|Ga0208099_1019754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300027641\|Ga0208827_1134818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300027676\|Ga0209333_1201059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300027853\|Ga0209274_10036116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2308	Open in IMG/M
3300027905\|Ga0209415_11025687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300027986\|Ga0209168_10371252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300028742\|Ga0302220_10260260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300028747\|Ga0302219_10017243	All Organisms → cellular organisms → Bacteria	2694	Open in IMG/M
3300028808\|Ga0302228_10028260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2819	Open in IMG/M
3300028871\|Ga0302230_10198194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300028906\|Ga0308309_11059011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300029997\|Ga0302302_1185017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300029999\|Ga0311339_10607228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300029999\|Ga0311339_11570309	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300029999\|Ga0311339_11837421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300030007\|Ga0311338_10600704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300030013\|Ga0302178_10028252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3271	Open in IMG/M
3300030013\|Ga0302178_10344076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300030494\|Ga0310037_10395178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300030503\|Ga0311370_11745700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300030520\|Ga0311372_10992688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300030524\|Ga0311357_10849247	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300030580\|Ga0311355_11414144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300030618\|Ga0311354_11937717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300030629\|Ga0210268_1006182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1507	Open in IMG/M
3300030677\|Ga0302317_10201591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300030739\|Ga0302311_10046639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3765	Open in IMG/M
3300030740\|Ga0265460_10059091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1514	Open in IMG/M
3300031027\|Ga0302308_10367987	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031028\|Ga0302180_10412430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300031090\|Ga0265760_10114921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300031233\|Ga0302307_10198234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300031236\|Ga0302324_101660192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300031525\|Ga0302326_12353436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300031545\|Ga0318541_10655021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300031708\|Ga0310686_100308664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300031715\|Ga0307476_11003707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300031754\|Ga0307475_10572183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300031821\|Ga0318567_10122477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1423	Open in IMG/M
3300031823\|Ga0307478_10856498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus endophyticus	761	Open in IMG/M
3300031947\|Ga0310909_10964307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300032054\|Ga0318570_10427650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300032205\|Ga0307472_101556826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300032515\|Ga0348332_13890985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300032770\|Ga0335085_10253790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2112	Open in IMG/M
3300032805\|Ga0335078_10122615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3716	Open in IMG/M
3300032892\|Ga0335081_10881953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300032898\|Ga0335072_11289199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300033829\|Ga0334854_086407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300034124\|Ga0370483_0266865	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.67%
Aquatic	Environmental → Aquatic	27.50%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.17%
Freshwater	Environmental → Aquatic → Freshwater	26.67%
Peat	Environmental → Terrestrial → Peat	21.67%
Sediment	Environmental → Aquatic → Sediment	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.67%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.33%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_02415840	2170459023	Grass Soil	APGAARFPWSWSLSAPEPASAAATWLFVYGRHANPGQRYGLLSDTCAGQYVAAHDLAEGTADRDGNLTIVAPNLDINPGAPDVWIQVYRLADGTPLGGVQGPLTGNGARTFLSAPPC
JGI12627J18819_102066793	3300001867	Forest Soil	GTCGGQYVTSSDLADGVADHAGNVTIVAPNLAISPRAADIWVLVYRWQDGVPLGGIQGPLTGPGARIFRSAAPC*
JGI26341J46601_101939511	3300003219	Bog Forest Soil	EGTCGGQYVTASDLADGVADRRGDLTITAQDLAISPQAPDVWVLLYRSEDGAPLGGVRGPLTGMGGKTFRSAPPC*
Ga0062385_102159041	3300004080	Bog Forest Soil	CGGQYVTASDLADGTADRRGDLTITAQELAISPQAPDFWVMLYRWEDGTPLGGVQGPLAGSGAKTFRSGPPC*
Ga0062387_1000819761	3300004091	Bog Forest Soil	AVRPEPGSAALTWLFVYGQHANPGQRYGLLSDTCGGQYVAAYGLADGTADRNGDLTIVAPDLNINPQASDVWIMVYRWADGAPLGGVQGPLTGNGAKTFQSTPLC*
Ga0062389_1005777652	3300004092	Bog Forest Soil	YGLLEGTCGGQYVTASDLADGTADRHGDLTIVAPNLAISSQAPDVWILVYRWVDGMTIGGIQGPLVGGDAKTFRTTPPC*
Ga0062389_1009218451	3300004092	Bog Forest Soil	LEGTCGGQYVTASDLADGTADRRGDLTITAKELTISPQAPDFWVMLYRWEDGTPLGGVQGPLAGNGAKTFRSGPPC*
Ga0062389_1042579042	3300004092	Bog Forest Soil	CGGQYVAAYGVAAGTADRNGDLTIVAPNLDIDPQAGDVWIQLYRWADGKPLGGVQGPLTGSGAKTFPSTPSC*
Ga0062389_1044119291	3300004092	Bog Forest Soil	GGSFSVVAVAVRPEPGSTPLTWLFVYGQHASPGQRYGLLSDTCGGQYVAADGVAAGTADRDGDLTIVAPNLDINPQAGDVWIQLYRFADGAPLGGVQGPLTGSGARTFQSAPSC*
Ga0062388_1008822682	3300004635	Bog Forest Soil	YGQHAAPGQRYGLLEGTCGGQYVTASDLADGTADRRGDLTITAQELAISPQAPDFWVMLYRWEDGTPLGGVQGPLAGSGAKTFRSGPPC*
Ga0062388_1011518811	3300004635	Bog Forest Soil	GARYGLLEGTCGGQYVTASDLADGTADRHGDLTIVAPNLAISSQAPDVWILVYRWVDGMTIGGIQGPLVGGDAKTFRTTPPC*
Ga0070735_103665623	3300005534	Surface Soil	WLVVYGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDINPQAPDAWILVYRWADGTPLGGVQGPLTGNGARTFRSVPPC*
Ga0070763_105177971	3300005610	Soil	YGLLEGTCGGQFVTASDLADGTADRRGDLTIVAPNLEISASDSDVWVLVYRLEDGMTLGGIQGPLIGNGAKAFRTTPPC*
Ga0075029_1004771323	3300006052	Watersheds	YGQHAAPGQRYGLLEGTCGGQYVTASDLADGTADRRGDLTITAKELTISPQAPDFWVMLYRWEDGAPLGGVQGPLAGNGAKTFRSGPPC*
Ga0070765_1011027951	3300006176	Soil	DPGQRYGLLDGTCGGQYVAPSDLADGIADGRGDLRIAAQDSAISPQAPGFWVMLYRWEDGAPLGGVQGPLTGSGAKTFRSAPPC*
Ga0116214_11120032	3300009520	Peatlands Soil	SVVAVAVRAKPGSAPVTWLFVYGQHAAPGQRYGLLEGTCGGQYVTASDLADGTADRRGDLTITARELAISPQASDFWVMLYRWEDGTPLGGVQGPLAGSGAKTFRSGPPC*
Ga0116114_10545741	3300009630	Peatland	VAAVRPRPGSGPLTWLFVYGQHADPGQRYGLLGDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC*
Ga0116102_10088451	3300009632	Peatland	KSGGSFSMVVAAVRPRPGSGPLTWLFVYGQHADPGQRYGLLGDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC*
Ga0116118_10595092	3300009637	Peatland	GDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC*
Ga0116216_104049342	3300009698	Peatlands Soil	VYGQHAGPGQRYGLLEGTCGGQYVTASDLADGTADRRGDLTITAPELAISPQAPDFWVMLYRWQDGTPLGGVQGPLTGTGAKTFRSAPPC*
Ga0116216_109209621	3300009698	Peatlands Soil	QRYGLLEGTCGGQYVTASDLADGTADRRGDLTITAKELTISPQAPDFWVMLYRWEDGAPLGGVQGPLAGNRAKTFRSGPPC*
Ga0116217_103235021	3300009700	Peatlands Soil	SPGQRYGLLEGTCGGQYVTASGLADGTADRRGDLTITAPELAISPQAPGFWVMLYRWQDGTPLGGVQGPLTGTGAKTFRSAPPC*
Ga0116134_10577731	3300009764	Peatland	GTCGGQYVTASDLADGTADRRGDLTITAPELAISPQAPDFWVMLYRWQDGTPLGGVQGPLTGTGAKTFRSAPPC*
Ga0126361_104029742	3300010876	Boreal Forest Soil	LYIYDQHAEPGARYGLLEGTCGGQYVTASDLADGTANRAGDLTIVAPNLTISARSADVWVLVYRWQDGVTLGGIQGPLIGNGARIFRSAPPC*
Ga0182014_100574283	3300014491	Bog	MFAAAIRPRPHSGPLLWLYVHGQHETPGARYGLLGGTCGGQFVTSADLADGTADRSGDLAMVAPNLSVSPRDPRAWVLVYRMADGVTLGGVRGPFIGGGARAFRSVPPC*
Ga0182016_105830081	3300014493	Bog	VLEGTCGGQYVTASDLADGTADRAGDLTIVAPNLTISALAPDVWVLVYRWQDGVTLGGIQGPLIGAGARTFRSAPPC*
Ga0181519_110441662	3300014658	Bog	LPGAGGGSFSVVVVAVRPEPTSATLTWLFVYGRHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGNLTIVAPNLDIDPRAPGVWISVYRLADGAPLGGVQGPLTGNGARTFLSSPPC*
Ga0182030_101257684	3300014838	Bog	LAALTWLFVYDLHADPGARYGLLEGTCGGQYVTASDLADSTADRQGDLTIVAPNLPISSQAPDVWILVYRWVDGVTIGGIQGPLVGGGAKTFRTTPPC*
Ga0182034_117276891	3300016371	Soil	GLLSDTCGGQYVAPYDLAEGTANRNGDLTIVAPDLNINPRAPDVWILVYRWADGTPLGGIRGPLTGNGARTFPSIPPC
Ga0187812_11526112	3300017821	Freshwater Sediment	AVRPEPGSATLTWLFVYGRHASPGQRYGLLSDTCGGQYVAAYDLAEGTADRSGDLTIVAPNLDINPRAPDVWILVYRWADGTPLGGVQGPLTGNGARTFRSAPPC
Ga0187820_11753031	3300017924	Freshwater Sediment	PGSATLTWLFIYGRHAVPGERYGVIEDTCGGQYVAEYDLADGTADREGDLTIVVPNLAISPRAPDVWVLLYRWEDGAPLGGIQGPLTGSGAKTFRSAPPC
Ga0187807_10428951	3300017926	Freshwater Sediment	PEPGSAALTWLFVYGRHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDINPRAPDVWILVYRWADGTQLGGVQGPLTGNGARTFQSAPPC
Ga0187806_13520201	3300017928	Freshwater Sediment	PQPGSATLTWLFVYGRHASPGQRYGLLSDTCAGQYVAAYDLAEGTADRNGDLTIVAPNLHIDPRAPDVWILVYRWADGAPLGGVQGPLTGNGARTFRSAPPC
Ga0187877_10881401	3300017931	Peatland	MVVAAVRPRPGSGPLTWLFVYGQHADPGQRYGLLGDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC
Ga0187814_100279641	3300017932	Freshwater Sediment	YGVIEDTCGGQYVAAYDLADGTADREGDLTIVAPNLDISPHAPDVWVLLYRWDDGAPLGGIQGPLTGSGAKTFRSAPPC
Ga0187819_100262965	3300017943	Freshwater Sediment	GGQYVAAYDLAEGTADRNGDLTIVAPNLDINPRAPDVWILVYRWADGTQLGGVQGPLTGNGARTFQSAPPC
Ga0187817_102921401	3300017955	Freshwater Sediment	PEPGSATLTWLFVYGRHASPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVASNLDINPRAPDVWILVYRWADGAPLGGVQGPLTGNGARTFRSAPPC
Ga0187780_103162793	3300017973	Tropical Peatland	VRPDPGSATLTWLFIYGRHAIPGARYGVIEDTCGGQYVAANDLADGTADQEGDLTIVAPNLAVSPQAPDVWVLLYRWGDGSPLGGIQGPLTGSGARTFRSTPAC
Ga0187782_103552063	3300017975	Tropical Peatland	CGGQYVAAYDLAEGTADRNGDLTIVAPDLDIDPGAPDVWILVYRWADGIPLGGVQGPLTGNGSRTFQSAPPC
Ga0187816_105502491	3300017995	Freshwater Sediment	RPDPGSATLTWLFIYGRHAIPGARYGVIEDTCGGQYVAAYDLADGTADRQGDLTIVAPNLAVSPQAPDVRVVLYRWEDGAPLGGIQGPLTGSGAKTFRSAPPC
Ga0187767_103289862	3300017999	Tropical Peatland	TWLFVYGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDINPRAPDVWIVVYRWADGTPLGGVQGPLTGNGARTFPSAPPC
Ga0187888_11009412	3300018008	Peatland	GPLTWLFVYGQHADPGQRYGLLGDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC
Ga0187885_102612041	3300018025	Peatland	VVAVAVRPRPGSATVTWLFVYGQHATPGQRYGLLEGTCGGQYVTASDLADGTADRRGDLTITAPELAISPQAPDFWVMLYRWQDGTPLGGVQGPLTGTGAKTFRSAPPC
Ga0187867_104147211	3300018033	Peatland	TWLFVYGQHADPGQRYGLLGDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC
Ga0187875_103456561	3300018035	Peatland	VTASDLADGTADRAGDLTIVAPNLSISAQAADVWVLVYRWQDGVTLGGIQGPLIGSGARTFRSTPPC
Ga0187862_105907172	3300018040	Peatland	PGSATVTWLFVYGQHATPGQRYGLLEGTCGGQYVTASDLADGTADRRGDLTITAPELAISPQAPDFWVMLYRWQDGTPLGGVQGPLTGTGAKTFRSAPPC
Ga0187887_103550102	3300018043	Peatland	LYIYGRHAQPGARYGLLEGTCGGQYVTASDLADGTADRAGDLTIVAPNLSISAQAADVWVLVYRWQDGVTLGGIQGPLIGSGARTFRSTPPC
Ga0187887_105909412	3300018043	Peatland	AVRPRPGSAALTWLFVYDLHADPGARYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWADGRTIGGIQGPLVGGGAKTFRTTPPC
Ga0187851_105047522	3300018046	Peatland	GGQFVTSSDLADGTADRQGDLTIVAPNLAISSQDPDVWILVYRWVDGTTIGGIQGPLLGGGARTFRTTPPC
Ga0187766_111107411	3300018058	Tropical Peatland	GLLEGTCGGQYVTPSDLADGVADRSGNFAITVPDLVLGPGDWFLLYRWQDGVPLGGVQGPLTGGGARTFRSAPACL
Ga0187784_102616423	3300018062	Tropical Peatland	YGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADQDGDLTIVAPNLAISPQAPDVWVLLYRWEDGAPLGGIQGPLTGSGAKTFRSAPPC
Ga0187784_106369401	3300018062	Tropical Peatland	YGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPDLDIDPGAPDVWILVYRLADGTPLGGVQGPLTGNGSRTFQSAPPC
Ga0210407_113468081	3300020579	Soil	GSAALTWLFVYGQHAEPGQHYGLLEGTCGGQYVTATDLADGTADRHGDLTIAAPDLGASPQAPDIWVLLYRWKDGAPLGGVQGPLVGGGARTFRSEPPC
Ga0210403_114970351	3300020580	Soil	SLFVYGQHANPGERYGLLSDTCGGQYVAAYDLAEGTADRKGDVTIVAPNLDISSTALDVWVLVYRLADGTPLGGVLGPLTGNGAKTFRSVPPCPGLRSAS
Ga0210399_104481791	3300020581	Soil	MFSLPDAAGGSFSMVAVAVRPEPGSAALTWLFVYGRHANPGERYGLLSDTCGGQYVAAYDLAEGTADRKGDVTIVAPNLDISSTALDAWVLVYRLADGTPLGGVLGPLTGNGAKTF
Ga0210399_104620761	3300020581	Soil	FVYGRHADPGQRYGLLEGTCGGQYVTASDLADGIADGRGDLKIAAQDSPIDPQAPGVWVMLYRWEDGAPLGGVQGPLTGSGAKTFRSAPPC
Ga0210396_113994562	3300021180	Soil	VRPRLGSAALTWLFVYGQHAEPGQHYGLLEGTCGGQYVTATDLADGTADRHGDLTIAAPDLGASPQAPDIWVLLYRWKDGAPLGGVQGPLVGGGARTFRSEPPC
Ga0210396_116608851	3300021180	Soil	CGGQFVTASDLADGTADRRGDLTIVAPNLEISASDSDVWVLVYRLEDGVTLGGIQGPLIGNGAKAFRTTPPC
Ga0213875_103154422	3300021388	Plant Roots	TLPGGSVSVVAAAIAPRAGSSPLTWLFVYGHVSPGQRYGLLEDTCGGQFVTATDLADATADAAGQLTMVVPNSDVSPRAGDVWIQLYRWSDGASLGGVQGPLTGPGARTFRTIAPC
Ga0210397_101837991	3300021403	Soil	QHAEPGQHYGLLEGTCGGQYVTATDLADGTADRHGDLTIAAPDLGASPQAPDIWVLLYRWKDGAPLGGVQGPLVGGGARTFRSEPPC
Ga0210397_113749851	3300021403	Soil	YGRHADPGQRYGLLEGTCGGQYVTASDLADGIADGRGDLRIATQDSAVDPLAPGVWVMLYRWEDGAPLGGVQGPLTGSGAKTFRSAPPC
Ga0210390_105536672	3300021474	Soil	RPEPDSAALTWLFVYGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVATNLDINPQAPDAWILVYRWADGTPLGGVQGPLTGNGARTFRSVPPC
Ga0210390_108831921	3300021474	Soil	LEGTCGGQYVTASDLADGIADGRGDLTITAQDLAISSQAPDVWVMLYRWEDGASLGGVRGPLTGIGAKTFRSAPPC
Ga0210390_112159812	3300021474	Soil	LTWLFVYGRHASPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDVTIVAPNLDINPRASDVWIMLYRSTDGTSLGGVQGPLTGNGARTFQSAPPC
Ga0224541_10128842	3300022521	Soil	NPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDIDPRAPGVWISVYRLADGAPLGGVQGPLTGSGARTLKSAAPC
Ga0208820_10430332	3300025576	Peatland	RYGLLGDTCGGEYVAPVDWADGTADRQGDLTIVAPNLSIAPRDPNLWIVVYRLDDGTTLGGVKGPLLGGGSKTFGSAPPC
Ga0208589_10989892	3300025634	Arctic Peat Soil	VPSADLAAGTADRKGNLTIVAPNLDISSSSADTWVLVYRLQDGVTLGGIQGPLIGSGARAFRSTPPC
Ga0207693_110259971	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LLVYGRHARPGERFGLLAGTCGGQYVASSDLADGVADQDGNVTIVAPNLAISSRAPGVWVLVYRWQDGMPLGGIQGPLTGPGARIFRSAAPC
Ga0208099_10197541	3300027096	Forest Soil	AVRPRPGSAALTWLFVYDLHADPGARYGLLEGTCGGQYVTASDLADGTADRHGDLTIVAPNLAISSQAPDVWILVYRWVDGTTIGGIQGPLVGGGAKTFRTTPPC
Ga0208099_10605781	3300027096	Forest Soil	PSPDSAPRTWLFVYGRDIHPGQRYGLLEDTCGGQYVTASDVADGTADQRGYLTIVARNLDISPTASDVWILLYRQEDGVSMGGVQGPLTGQGARTFRSVPRC
Ga0208827_11348181	3300027641	Peatlands Soil	SLPDAAGGSFSVVVVAVRPEPGSATFTWLFVYGQHASPGQRYGLLSDTCGGQYVAAYGLAEGTADRNGDLTIVASNLDIDPRAPDVWILVYRWADGAPLGGVQGPLTGNGARTFRSAPPC
Ga0209333_12010591	3300027676	Forest Soil	GGSFSVVAVAVRPEPGSAALTWLFVYGRHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDIDPRAPGVWISVYRLADGAPLGGVQGPLTGSGARTFKSAAPC
Ga0209274_100361163	3300027853	Soil	ANPGQRYGLLSDTCGGQYVAAYGLADGTADRNGDLTIVAPDLDLNPQASDVWILVYRWADGAPLGGVQGPLTGNGARTFQSAPPC
Ga0209415_110256871	3300027905	Peatlands Soil	GQRYGLLSDTCGGQYVAAYGLAEGTADRNGDLTIVASNLDIDPRAPDVWILVYRWADGAPLGGVQGPLTGNGARTFRSAPPC
Ga0209168_103712522	3300027986	Surface Soil	LVVYGQHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDINPQAPDAWILVYRWADGTPLGGVQGPLTGNGARTFRSVPPC
Ga0302220_102602601	3300028742	Palsa	LTWLFVYDLHAEPGVRYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWADGVTIGGVQGPLVGGGAKTFRTTPPC
Ga0302219_100172431	3300028747	Palsa	SDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWVDGVTIGGIQGPLVGGGAKTFRTTPPC
Ga0302228_100282601	3300028808	Palsa	TWLFVYDMHADPGVSYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWVDGVTIGGIQGPLVGGGAKTFRTTPPC
Ga0302230_101981942	3300028871	Palsa	VAAAVRPGPGSAALTWLFVYDMHADPGARYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWADGVTIGGVQGPLVGGGAKTFRTTPPC
Ga0308309_110590111	3300028906	Soil	VTWLFVYGRHADPGQRYGLLDGTCGGQYVAPSDLADGIADGRGDLRIAAKDSAISPQAPGFWVMLYRWEDGAPLGGVQGPLTGSGAKTFRSAPPC
Ga0302302_11850172	3300029997	Palsa	DPGVSYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWVDGVTIGGIQGPLVGGGAKTFRTTPPC
Ga0311339_106072282	3300029999	Palsa	SPGSAALTWLFIYDRHADPGQRYGLLEGTCGGQFVTSSDLADGTADRQGNLTIVAPNLDISSQAPDVWILIYRWVDGATIGGVQGPLVGGGAKTFRTTPPC
Ga0311339_115703092	3300029999	Palsa	SDLADGTADRQGDLTIVAPNLAISSQAHDVWILVYRWVDGVTIGGIQGPLVGSGARTFRTTPPC
Ga0311339_118374211	3300029999	Palsa	LFVYGQHASPGQRYGLVSDTCGGQYVAAYGVAAGTADRNGDLTIVAPNLDINPQAADVWIQLYQWADGTPLGGVQGPLTGSGARTFRSTPSC
Ga0311338_106007041	3300030007	Palsa	TWLFIYDQHADPGARYGLLEGTCGGQFVTSSDLADGTADRQGDLTIVAPNLAISSQSPDVWILVYRWVDGTTIGGIQGPLLGGGARTFRTTPPC
Ga0302178_100282521	3300030013	Palsa	ASPGARYGLLEGTCGGQFVTSADLADGTADRQGDLTIVAPNLDISAGSADTWILIYRLQDGVTLGGIKGPLIGSGAQAFRSTPPC
Ga0302178_103440762	3300030013	Palsa	AALTWLFIYDQHAEPGERYGLLEGTCGGQFVTSSDLADGTADRQGDLTIVAPNLTISSQASDVWILVYRWVDGTTLGGIQGPLVGGGARTFRTTPPC
Ga0310037_103951781	3300030494	Peatlands Soil	YGLLEGTCGGQYVTASDLADGTADRRGDLTITARELAISPQASDFWVMLYRWEDGTPLGGVQGPLAGSGAKTFRSGPPC
Ga0311370_117457001	3300030503	Palsa	LFVYGKHAAPGARYGLLGGTCGGQYVAPVDWADGTANRNGDLTIVAPDLAIEPQDPKLWILVYRLKNGVTLGGITGPFIGGGSKTFRSAPPC
Ga0311372_109926882	3300030520	Palsa	DPGQRYGLLEGTCGGQFVTSSDLADGTADRQGNLTIVAPNLDISSQAPDVWILIYRWVDGATIGGVQGPLVGGGAKTFRTTPPC
Ga0311357_108492472	3300030524	Palsa	GQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWADGVTIGGVQGPLVGGGAKTFRTTPPC
Ga0311355_114141442	3300030580	Palsa	RGADPGARYGLLEGTCGGQFVTSSDLADGTADRQGDLTIVAPNLAISSEAPDVWILVYRWVDGATIGGVQGPLVGGGAKTFRTTPPC
Ga0311354_119377172	3300030618	Palsa	NDRHADPGARYGLLEGTCGGQFVTSSDLADGTADRQGDLTIVAPNLAISSQAHDVWILVYRWVDGVTIGGIQGPLVGSGARTFRTTPPC
Ga0210268_10061821	3300030629	Soil	AVRSEPGSATLTWLFVYGRHASPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDVTIVAPNLDINPRASDVWIMLYRSTDGTSLGGVQGPLTGNGARTFQSAPPC
Ga0302317_102015911	3300030677	Palsa	QRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDIDPRAPGVWISVYRLTDGAPLGGVQGPLTGSGARTFKSAAPC
Ga0302311_100466391	3300030739	Palsa	AAVRPGPGSAALTWLFVYDMHADPGVSYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWVDGVTIGGIQGPLVGGGAKTFRTTPPC
Ga0265460_100590911	3300030740	Soil	AVAVRSEPGSATLTWLFVYGRHASPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDVTIVAPNLDINPRASDVWIMLYRSTDGTSLGGVQGPLTGNGARTFQSAPPC
Ga0302308_103679871	3300031027	Palsa	CTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWADGVTIGGVQGPLVGGGAKTFRTTPPC
Ga0302180_104124301	3300031028	Palsa	FVYGRHANPGQRYGLLSDTCGGQYVAAYDLAEGTADRNGDLTIVAPNLDIDPRAPGVWISVYRLADGAPLGGVQGPLTGSGARTFKSAAPC
Ga0265760_101149212	3300031090	Soil	VFSLPDAAGGSFSVVAVAVRPQPGSAALTWLFVYGRHANPGERYGLLSDTCGGQYVAAYALAEGTADRKGDVTIVAPNLDISSTALDVWIMVYRLADGTPLGGVLGPLTG
Ga0302307_101982341	3300031233	Palsa	AAIRPRPGSAALTWLFVYDLHADPGARYGLLEGTCGGQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWADGVTIGGVQGPLVGGGAKTFRTTPPC
Ga0302325_128599531	3300031234	Palsa	GGQYVAAYGVAAGTADRNGDLTIVAPNLDINPQAADVWIQLYQWADGTPLGGVQGPLTGSGARTFRSTPSC
Ga0302324_1016601921	3300031236	Palsa	GADGSFSVVAVAVRAKPGSAPVTWLFVYGQHVSPGQRYGLLSDTCGGQYVAAYGVAAGTADRNGDLTIVAPNLDINPQAADVWIQLYQWADGTPLGGVQGPLTGSGARTFRSTPSC
Ga0302326_123534361	3300031525	Palsa	TCGGQYVAAYGVAAGTADRNGDLTIVAPDLDINPQAPDVWIQLYRWADGTPLGGVQGPLTGSGARTFQSTPSC
Ga0318541_106550212	3300031545	Soil	HANPGQRYGLLSDTCGGQYVAPYDLAEGTANRNGDLTIVAPDLNINPRAPDVWILVYRWADGTPLGGIRGPLTGNGARTFPSVPPC
Ga0310686_1003086642	3300031708	Soil	GSAALTWLFVYGQHASPGQRYGLLEGTCGGQFVTASDLADGTADRQGDVTIVAPNLDISASDSDVWVLVYRLEDGVTLGGIQGPLIGNGAKAFRTTPPC
Ga0307476_110037071	3300031715	Hardwood Forest Soil	LTWLFVYGQHANPGERYGLLSDTCGGQYVAAYDLAEGTADRKGDVTIVAPNLDISSTALDVWVLVYRLADGAPLGGVLGPLTGNGAKTFRSVPPCPGSRLPTR
Ga0307475_105721831	3300031754	Hardwood Forest Soil	VVAVAVRPEPGSAALTWLFVYGQHASPGKRYGLLSDTCGGQYVAAYDLAEGTADRKGDVTIVAPNLDISSTALDVWVLVYRLADGAPLGGVLGPLTGNGAKTFRSVPPCPGSRLPTR
Ga0318567_101224771	3300031821	Soil	VVAVAVRAGPGASPHTWLFVYGHHADPGQRYGLLEGTCGGQYVTPSALADGIADRNGNLTITVPDLALGPQAPDVWFMLYRWQDGVSLGGIQGPLTGGGARTFPSTPSCPAGP
Ga0307478_108564981	3300031823	Hardwood Forest Soil	VVVRPRPGSAALTWLFVYGQHAEPGQHYGLLEGACGGQYVTATDLADGTADRHGDLTIAAPDLGASPQAPDIWVLLYRWKDGAPLGGVQGPLVGGGARTFRSEPPC
Ga0310909_109643071	3300031947	Soil	SGSAALTWLFVYGQHANPGQRYGLLSDTCGGQYVAPYDLAEGTANRNGDLTIVAPDLNINPRAPDVWILVYRWADGTPLGGIRGPLTGNGARTFPSVPPC
Ga0318570_104276501	3300032054	Soil	VYGQHADPGQRYGLLEGTCGGQYVAPSALADGVADRSGNLTITVPDLALGPLAPDDWFLLYRWQDGVPLGGVQGPLTGGGARTFRSAPACS
Ga0307472_1015568261	3300032205	Hardwood Forest Soil	RDAHPGERFGLLEGTCGGQYVTSSDLADGVADQDGNVTIVAPNLAISPRAAAIWVLVYRWQDGVPLGGIQGPLTGPGARIFRSAAPC
Ga0348332_138909851	3300032515	Plant Litter	RYGLLEGTCGGQYVTASDLADGTADRSGDLTIVAPNLPISARAANVWVLVYRWEDGVTLGGIQGPLIGHGAKTFRSAPTC
Ga0335085_102537902	3300032770	Soil	VYGRHASPGQRYSVIEDTCGGQYIAGYDVAHGTADRYGDLTIVAPDQPLGIRCLDLLDRRDDGAPLGGVQGLLTGNGARTFWSAPPC
Ga0335078_101226151	3300032805	Soil	AVRTRPGASPLTWLFVYGQGADPGQRYGLLQGMCGGQYVTASDLADGTADRSGNLTITVPDLALGPQASDVWFMLYRWQDGVPLGGVQGPLTASRARIFRSGPPCS
Ga0335081_108819531	3300032892	Soil	GQRYGLLEGTCGGQYVTPSALADGVADRSGNLTITVPDLGPLAPDDWFLLYRSQDGVPLGGVQGPLTGGGARTFRSAPACS
Ga0335072_112891992	3300032898	Soil	YGRHAIPGQRYGVIQDTCGGEYVAAYDLADATADREGDLTIVAPNVDISPRASDVWILLFRWEDGAPLGGVQGPLTGSGAKTFRSTPRC
Ga0334854_086407_1_288	3300033829	Soil	LTWLFVYGQHASPGARYGLLEGTCGGQFVTSSDLADGTADRQGDLSIVAPNLDISASSADTWILIYRLRDGVTLGGIKGPLIGSGAQAFRSAPPC
Ga0370483_0266865_2_214	3300034124	Untreated Peat Soil	GQYVTASDLADGTADRQGDLTIVAPNLAISSQAPDVWILVYRWVDGVTIGGIQGPLVGGGAKTFRTTPPC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences