Metagenome / Metatranscriptome Family F073793

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073793
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	63 residues
Representative Sequence	MAEVKKQDYSESAPILDEEDEATLAAIDRGIKAADEGRVVPLEEVRQRMSQWLTKSSSPKTR
Number of Associated Samples	99
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.67 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	70.83 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.500 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.44% β-sheet: 0.00% Coil/Unstructured: 65.56%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05016	ParE_toxin	12.50
PF02878	PGM_PMM_I	6.67
PF01642	MM_CoA_mutase	4.17
PF05690	ThiG	3.33
PF13692	Glyco_trans_1_4	3.33
PF01784	NIF3	3.33
PF00246	Peptidase_M14	3.33
PF01380	SIS	3.33
PF01726	LexA_DNA_bind	2.50
PF02502	LacAB_rpiB	1.67
PF04138	GtrA	1.67
PF03712	Cu2_monoox_C	1.67
PF03364	Polyketide_cyc	0.83
PF13462	Thioredoxin_4	0.83
PF00696	AA_kinase	0.83
PF16124	RecQ_Zn_bind	0.83
PF15919	HicB_lk_antitox	0.83
PF00535	Glycos_transf_2	0.83
PF03853	YjeF_N	0.83
PF00889	EF_TS	0.83
PF02880	PGM_PMM_III	0.83
PF01936	NYN	0.83
PF04023	FeoA	0.83
PF16826	DUF5076	0.83
PF13175	AAA_15	0.83
PF13641	Glyco_tranf_2_3	0.83
PF01939	NucS	0.83
PF02321	OEP	0.83
PF07676	PD40	0.83
PF02310	B12-binding	0.83
PF13520	AA_permease_2	0.83
PF04221	RelB	0.83
PF00781	DAGK_cat	0.83
PF09314	DUF1972	0.83
PF07927	HicA_toxin	0.83
PF00263	Secretin	0.83
PF04390	LptE	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	7.50
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	7.50
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	4.17
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	3.33
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	3.33
COG2022	Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)	Coenzyme transport and metabolism [H]	3.33
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	3.33
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	3.33
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	1.67
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.67
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.67
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	0.83
COG0264	Translation elongation factor EF-Ts	Translation, ribosomal structure and biogenesis [J]	0.83
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.83
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.83
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.83
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.83
COG2980	Outer membrane lipoprotein LptE/RlpB (LPS assembly)	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.83 %
Unclassified	root	N/A	34.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.83 %
Unclassified	root	N/A	34.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.83 %
Unclassified	root	N/A	34.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Unclassified	root	N/A	34.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.17 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.17 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	11.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.67 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.17 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	8.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.67 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.67 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.17 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	3.33 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.83 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.17 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	3.33 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.67 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.17 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	3.33 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.67 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	0.83 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.83 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10016636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4671	Open in IMG/M
3300000567\|JGI12270J11330_10190375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	713	Open in IMG/M
3300004114\|Ga0062593_101437145	Not Available	739	Open in IMG/M
3300004132\|Ga0058902_1025292	Not Available	753	Open in IMG/M
3300004152\|Ga0062386_100019271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4964	Open in IMG/M
3300004152\|Ga0062386_100123455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2005	Open in IMG/M
3300004635\|Ga0062388_100018192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4010	Open in IMG/M
3300004643\|Ga0062591_100972079	Not Available	804	Open in IMG/M
3300005167\|Ga0066672_10229589	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005174\|Ga0066680_10608255	Not Available	683	Open in IMG/M
3300005434\|Ga0070709_11100639	Not Available	635	Open in IMG/M
3300005435\|Ga0070714_100016952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5893	Open in IMG/M
3300005436\|Ga0070713_100001139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17037	Open in IMG/M
3300005445\|Ga0070708_101833194	Not Available	563	Open in IMG/M
3300005467\|Ga0070706_100497539	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005557\|Ga0066704_10413552	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005591\|Ga0070761_10714050	Not Available	628	Open in IMG/M
3300005591\|Ga0070761_10902696	Not Available	558	Open in IMG/M
3300005712\|Ga0070764_10205775	Not Available	1105	Open in IMG/M
3300006041\|Ga0075023_100317993	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300006050\|Ga0075028_100621014	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300006050\|Ga0075028_101034236	Not Available	512	Open in IMG/M
3300006176\|Ga0070765_101089238	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006794\|Ga0066658_10521411	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300006796\|Ga0066665_10610333	Not Available	875	Open in IMG/M
3300006806\|Ga0079220_10257328	Not Available	1049	Open in IMG/M
3300006903\|Ga0075426_11040709	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300006954\|Ga0079219_11467701	Not Available	615	Open in IMG/M
3300007265\|Ga0099794_10476819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	655	Open in IMG/M
3300009012\|Ga0066710_103436655	Not Available	601	Open in IMG/M
3300009029\|Ga0066793_10521654	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300009038\|Ga0099829_10028789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3933	Open in IMG/M
3300009089\|Ga0099828_10046427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3585	Open in IMG/M
3300009089\|Ga0099828_10604019	Not Available	987	Open in IMG/M
3300009090\|Ga0099827_10338579	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300009143\|Ga0099792_10345708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	896	Open in IMG/M
3300009520\|Ga0116214_1020263	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300009698\|Ga0116216_10013418	All Organisms → cellular organisms → Bacteria → Acidobacteria	5161	Open in IMG/M
3300010339\|Ga0074046_10039467	Not Available	3179	Open in IMG/M
3300010339\|Ga0074046_10088925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	2000	Open in IMG/M
3300010379\|Ga0136449_101945285	Not Available	871	Open in IMG/M
3300010379\|Ga0136449_104243023	Not Available	531	Open in IMG/M
3300010876\|Ga0126361_10448331	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300011120\|Ga0150983_12273586	Not Available	653	Open in IMG/M
3300011120\|Ga0150983_14256500	Not Available	524	Open in IMG/M
3300011120\|Ga0150983_15229390	Not Available	730	Open in IMG/M
3300011120\|Ga0150983_15940698	Not Available	641	Open in IMG/M
3300011271\|Ga0137393_10971076	Not Available	724	Open in IMG/M
3300012189\|Ga0137388_10058684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3156	Open in IMG/M
3300012189\|Ga0137388_10419568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1240	Open in IMG/M
3300012199\|Ga0137383_10736861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	720	Open in IMG/M
3300012202\|Ga0137363_10195809	Not Available	1618	Open in IMG/M
3300012205\|Ga0137362_10678703	Not Available	886	Open in IMG/M
3300012209\|Ga0137379_10378337	Not Available	1325	Open in IMG/M
3300012210\|Ga0137378_11175422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	683	Open in IMG/M
3300012359\|Ga0137385_11338450	Not Available	579	Open in IMG/M
3300012362\|Ga0137361_10874880	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300012363\|Ga0137390_11752823	Not Available	554	Open in IMG/M
3300012582\|Ga0137358_10201925	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300012923\|Ga0137359_10232055	Not Available	1647	Open in IMG/M
3300012929\|Ga0137404_10049618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3211	Open in IMG/M
3300012929\|Ga0137404_10794760	Not Available	859	Open in IMG/M
3300012930\|Ga0137407_10547281	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012930\|Ga0137407_11048560	Not Available	773	Open in IMG/M
3300014160\|Ga0181517_10616361	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300014501\|Ga0182024_10000197	All Organisms → cellular organisms → Bacteria → Acidobacteria	143951	Open in IMG/M
3300014501\|Ga0182024_10076472	All Organisms → cellular organisms → Bacteria	5022	Open in IMG/M
3300017946\|Ga0187879_10798939	Not Available	527	Open in IMG/M
3300018034\|Ga0187863_10086371	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300019789\|Ga0137408_1090500	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300019789\|Ga0137408_1104489	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300020583\|Ga0210401_10000086	All Organisms → cellular organisms → Bacteria → Acidobacteria	104615	Open in IMG/M
3300020583\|Ga0210401_10440284	Not Available	1166	Open in IMG/M
3300021088\|Ga0210404_10266553	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300021171\|Ga0210405_10025027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4809	Open in IMG/M
3300021171\|Ga0210405_10838777	Not Available	702	Open in IMG/M
3300021181\|Ga0210388_10021298	All Organisms → cellular organisms → Bacteria	5253	Open in IMG/M
3300021559\|Ga0210409_11058180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	686	Open in IMG/M
3300025906\|Ga0207699_10398280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	980	Open in IMG/M
3300025910\|Ga0207684_10422100	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300026320\|Ga0209131_1046100	All Organisms → cellular organisms → Bacteria → Acidobacteria	2479	Open in IMG/M
3300026551\|Ga0209648_10018175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6140	Open in IMG/M
3300026557\|Ga0179587_10737813	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300027570\|Ga0208043_1015734	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300027641\|Ga0208827_1006469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4564	Open in IMG/M
3300027824\|Ga0209040_10130136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300027825\|Ga0209039_10075736	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300027846\|Ga0209180_10021010	Not Available	3460	Open in IMG/M
3300027854\|Ga0209517_10070839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2476	Open in IMG/M
3300027857\|Ga0209166_10012346	All Organisms → cellular organisms → Bacteria → Acidobacteria	5489	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10012914	All Organisms → cellular organisms → Bacteria	3124	Open in IMG/M
3300028798\|Ga0302222_10017680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2923	Open in IMG/M
3300028808\|Ga0302228_10223843	Not Available	853	Open in IMG/M
3300029944\|Ga0311352_10986520	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300029951\|Ga0311371_10173328	All Organisms → cellular organisms → Bacteria → Acidobacteria	3255	Open in IMG/M
3300029951\|Ga0311371_10624661	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300029999\|Ga0311339_10491201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1251	Open in IMG/M
3300030007\|Ga0311338_10757037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	974	Open in IMG/M
3300030399\|Ga0311353_11501663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	546	Open in IMG/M
3300030509\|Ga0302183_10347464	Not Available	571	Open in IMG/M
3300030520\|Ga0311372_11500655	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300030580\|Ga0311355_10744402	Not Available	906	Open in IMG/M
3300030706\|Ga0310039_10320353	Not Available	583	Open in IMG/M
3300031234\|Ga0302325_10109774	All Organisms → cellular organisms → Bacteria → Acidobacteria	5124	Open in IMG/M
3300031234\|Ga0302325_10749592	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300031234\|Ga0302325_11043073	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031236\|Ga0302324_100457276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1880	Open in IMG/M
3300031576\|Ga0247727_11196722	Not Available	509	Open in IMG/M
3300031708\|Ga0310686_100127563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5972	Open in IMG/M
3300031708\|Ga0310686_103498182	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300031716\|Ga0310813_10134339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1971	Open in IMG/M
3300031720\|Ga0307469_10874633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	830	Open in IMG/M
3300031753\|Ga0307477_10024032	All Organisms → cellular organisms → Bacteria	4163	Open in IMG/M
3300031754\|Ga0307475_10050526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3121	Open in IMG/M
3300031823\|Ga0307478_11317857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	600	Open in IMG/M
3300031962\|Ga0307479_10437326	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300032515\|Ga0348332_10070439	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300032892\|Ga0335081_11789257	Not Available	665	Open in IMG/M
3300032895\|Ga0335074_10006782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15878	Open in IMG/M
3300033412\|Ga0310810_10026322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7069	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.17%
Aquatic	Environmental → Aquatic	10.00%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Peat	Environmental → Terrestrial → Peat	12.50%
Freshwater	Environmental → Aquatic → Freshwater	7.50%
Sediment	Environmental → Aquatic → Sediment	2.50%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.83%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004132	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100166364	3300000567	Peatlands Soil	MGEVKKPAFDADSTPILDQEDEATLVAIDRGIKAADEGRVVFLQEVRRRMEQRGTSSPNIPTPPGNSALPS*
JGI12270J11330_101903751	3300000567	Peatlands Soil	MGEAKKLDFGADSTPILDEEDEATLAAIDRGIKAADEGRVVPLEEVRRQMEQWAARSSSPKTR*
Ga0062593_1014371451	3300004114	Soil	MLRSRHSLALQPLQGYGRGMAEVKKQDFCESAPILDKEDEATLAAIDRGIKAADEGRVLPLGEVRQRMRQWLTKSPSPKTR*
Ga0058902_10252922	3300004132	Forest Soil	VTKWDFDEQAPILDNEDEKTLAAIDRGIRAADEGRVVPSDVVRQRMQEWLTESSSPKTR
Ga0062386_1000192714	3300004152	Bog Forest Soil	MAELKKEAANESASILDEEDDATLAAIDRGIQSADEGRVVPLEEVRQRMSRWLTKSSSPKTR*
Ga0062386_1001234552	3300004152	Bog Forest Soil	MGEAKKLDFGADSTSILDEEDEATLAAIDRGIKAADEGRVVPLEEVRRRMEQWATRSSSPKTR*
Ga0062388_1000181927	3300004635	Bog Forest Soil	MAEVNSKNVNQSAPILDEEDEATLAAIDRGIRSADEGRVVPLEEVRQRMSRWLTKSSSPKTRCRTAP*
Ga0062591_1009720792	3300004643	Soil	MLRSRHSLALQPLQGYGRGMAEVKKQDFCESAPILDKEDEATLAAIDRGIKAADEGRVLPLGEVRQRMR
Ga0066672_102295892	3300005167	Soil	MAEVKKLDFSGTDHILDQEDEATLAAIDRGIKDADEGRLVPAEEVRKRMKKWITKSSSPKKH*
Ga0066680_106082551	3300005174	Soil	MAEVKKQHFCEPAPILDEEDEATLAAIDRGIKATDEGRLLPLGEVRQRMRQWLTKSSSPKTR*
Ga0070709_111006392	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DAKDGNAGGFERYKSMADLKSREVAKPDRILDEEDETTLAAIDRGIKAANEGRVVSSEAARRRFRERLTRSSSPKTRSET
Ga0070714_1000169521	3300005435	Agricultural Soil	MADLKSREVAKPDRILDEEDETTLAAIDRGIKAADEGRVVSSEAARRRFREWLTRSSSPKTRSET*
Ga0070713_10000113913	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MADLKSREVAKPDRILDEEDETTLAAIDRGIKAANEGRVVSSEAARRRFRERLTRSSSPKTRSET*
Ga0070708_1018331942	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAEVKKQDFGEPAPILDEEDEATLAAIDRGIKATDEGRVLPSGEVRQRMRQWLTKSSSPKTR*
Ga0070706_1004975391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAEVKKQDYSESAPILDEEDEATLAAIDRGIKAADEGRVVPLEEVRQRMSQWLTKSSSPKTR*
Ga0066704_104135521	3300005557	Soil	MAEVKKQHFCEPAPILDEEDEATLAAIDRGIKATDEGRLLPLGEVRQRMRQWLTKSSSPKTR
Ga0070761_107140501	3300005591	Soil	VGLDMKKEDVNESAPILDEEDEATLAAIDRGISSADQGRVVPLEEVRRRMNGCLQNPLH*
Ga0070761_109026962	3300005591	Soil	MGDVKKPDFNEPAAILDEEDEETVAAIDRGIKAADEGRVVPLVDVRQRMQTWLSKSSSLKTR*
Ga0070764_102057751	3300005712	Soil	VGVDVKKEDVNESAPILDEEDEATLAAIDRGILSADQGRVVLLEEVRQQMHQRLTKSSSPKTR*
Ga0075023_1003179931	3300006041	Watersheds	MGEVTNPNFDDDSAPILDEEDEATLAAIDRGVKAADEGHVVPFEEVRRRMELWATKSSSPKTR*
Ga0075028_1006210141	3300006050	Watersheds	MGEVKKLDFDDDSAPILDEEDEATLAAIDRGVKAADEGHVVPFEEVRRRMELWATKSSSPKTR*
Ga0075028_1010342362	3300006050	Watersheds	MAEAKKSDLHEPDPILDEEDEATLAAIDRGIQAADEGRVVTLEEARTRMQKWLTESSSPKPR*
Ga0070765_1010892382	3300006176	Soil	MAEVKKRDLVEPDSILDEENDATLAAIDRGIKAADEGRVVSFEEARRRLHEWLTRSSSQKTRS*
Ga0066658_105214112	3300006794	Soil	MGEVKKPDFENDSAPILEEEDEATLAAIDRGIKAADQGRVVPLQEARQRMQQWATKSSSLKTR*
Ga0066665_106103332	3300006796	Soil	MGEVKKLDFDESAPILDEEDEATLAAIDRGIKAADEGRVVPMEEVRRRMNQ*
Ga0079220_102573281	3300006806	Agricultural Soil	QGYRRGMAEVKKQDFCEPAPILDEEDEATLAAIDRGIQATDEGRVLPLGEVRQPMRQRLTKSSSPKTR*
Ga0075426_110407093	3300006903	Populus Rhizosphere	AKPDRILDEEDETTLAAIDRGIKAADEGRVVSSEAARRRFREWLTRSSSPKTRSET*
Ga0079219_114677012	3300006954	Agricultural Soil	MAEVKKQDFCEPAPILDEEDEATLAAIDRGIQATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0099794_104768192	3300007265	Vadose Zone Soil	MPKTKKILDEPVPILDEEDEATLAAIDRGIKAADEGRVVSLEQVRQRIQKWLTKSSSPKTR*
Ga0066710_1034366553	3300009012	Grasslands Soil	PGYCRGMGEVKRLDFDDSAAILGEEDEATLAGIDRGIKAANEGRVVPLEEVRRRMEQWATRSSSPKTR
Ga0066793_105216542	3300009029	Prmafrost Soil	MAEVKKPHFNEPAPILEEEDEATLVAIDRGIKAADEGRLVSAEEVRQRMQKWLTEPSSPKTR*
Ga0099829_100287892	3300009038	Vadose Zone Soil	MAKTKKILDEPVPILDEEDEATLAAIDRGIKAADEGRVVSLEQVRQRIQKWFTKSSSPKTR*
Ga0099828_100464273	3300009089	Vadose Zone Soil	MAKTKKILDEPVPILDEEDEATLAAIDRGIEAADEGRVVSLEQVRQRIQKWFTKSSSPKTR*
Ga0099828_106040191	3300009089	Vadose Zone Soil	MAEVKKQDFCEPPPILDEEDEATLGAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0099827_103385791	3300009090	Vadose Zone Soil	MPKTKKILDEPVPILDEEDETTLAAIDCGVKTADEGRVVSLEQVRQRIQKWLTKSSSPKTR*
Ga0099792_103457083	3300009143	Vadose Zone Soil	MGEAREDPAKILEEEDEATLAAIDRGVRAADEGRTLPLEEVWKRLEQWFTKSSSPKTH*
Ga0116214_10202633	3300009520	Peatlands Soil	MGEVKKLDFDADSTPILEEEDEVTLAAIDRGIKAADEGRVVPLEEVRRRMEQWESSSPKTR*
Ga0116216_100134182	3300009698	Peatlands Soil	MGEVKKLDFDADSTPILEEEDEATLAAIDRGIKAADEGRVVPLEEVRRRMEQWESSSPKTR*
Ga0074046_100394673	3300010339	Bog Forest Soil	MGKAKKVDFNKPVPILEEEDEATLAAIDRGIKAADEGRVVPLEEVRQRMKTWLTKSSSPKTR*
Ga0074046_100889253	3300010339	Bog Forest Soil	MGKAKKVDFDEPVPILDEEDEATLAAIDRGIKAADEGRVVPLEKVRPRMKTWLTRSSLPKTR*
Ga0136449_1019452851	3300010379	Peatlands Soil	EVKKKDVNESAPILDTEDEATLAAIDRGIQSADQGRVVPLEEVRQRMSRWLTNSSSPKMR
Ga0136449_1042430231	3300010379	Peatlands Soil	MAEVKKLDFNQPATILDEEDEAALAAIDRGISAADEGRVVPMEEVRQRMQAWLTKSFSPTTR*
Ga0126361_104483311	3300010876	Boreal Forest Soil	MAEVKKRDLVEPDSILDEENEATLAAIDRGIKAADEGRVVSFEEARRRLHEWLTR
Ga0150983_122735862	3300011120	Forest Soil	MAEVKKQVFDVPAPILEEEDEATLSAIERGVKAAEEGRVVPLEEVRRRMQKWPIKSSSPKTP*
Ga0150983_142565002	3300011120	Forest Soil	KGMGEVKKLEFDESAPILEEEDEATLAAIDRGIKAADEGRVVPLEEVRRRMEKWATKSSSPKTR*
Ga0150983_152293901	3300011120	Forest Soil	MGEVKKQDFSESAPILDEEDEATLAAIDRGIQAADEGRVVSLEEARRRMGQWLTTSSSPKTR*
Ga0150983_159406981	3300011120	Forest Soil	VADVTKWDFDEQAPILDNEDEKTLAAIDRGIRAADEGRVVPSDVVRQRMQEWPTESFTPKTR*
Ga0137393_109710761	3300011271	Vadose Zone Soil	MAEVKKQDFCEPAPILDEEDEMTLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKKR*
Ga0137388_100586842	3300012189	Vadose Zone Soil	MAKTKKILDEPVPILDEEDEATLAAIDRGIKAADEGRVVSLEQVRQRIQKWLTKSSSPKTR*
Ga0137388_104195682	3300012189	Vadose Zone Soil	MAEVKKQDFCEPPPILDEEDEATLGAIDRGIKATDEGRVLPLGEVRQRMRQRLIKSSSPRRVS*
Ga0137383_107368612	3300012199	Vadose Zone Soil	MGEVKKLDFDDDSAPILEEEDETTLAAIDRGIKAADEGRVVPLEEVRQRMQQW
Ga0137363_101958092	3300012202	Vadose Zone Soil	MAEVKKEDFCEPPPILDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0137362_106787031	3300012205	Vadose Zone Soil	MAEVKKQDFCEPPPIIDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0137379_103783372	3300012209	Vadose Zone Soil	MAEVKKLDFSESAPMLEEEDEATLAAIDRGIKAADEGRVVPLEEVRRRMNQWLTRSSSPKTR*
Ga0137378_111754223	3300012210	Vadose Zone Soil	MAEVKKLDFSESAPILEEEDEATLAAIDRGIKAADEGRVVPLEEVRRRMNQWLTRSSSPKTR*
Ga0137385_113384501	3300012359	Vadose Zone Soil	MAEVKKQDFCESPPILDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0137361_108748802	3300012362	Vadose Zone Soil	MAEVKKLDFNEPAPILGNEDEATLAAIDRGIKAADEGRVVPTEEVRKRMREWLTKSSLPKTR*
Ga0137390_117528231	3300012363	Vadose Zone Soil	MAEVKKQDFCEPPPILDEEDEATLGAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR
Ga0137358_102019251	3300012582	Vadose Zone Soil	MAEVKKQDFGEPAPILDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0137359_102320552	3300012923	Vadose Zone Soil	GMAEVKKQDFGEPAPILDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0137404_100496181	3300012929	Vadose Zone Soil	QDFGEPAPILDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPKTR*
Ga0137404_107947603	3300012929	Vadose Zone Soil	MAEVKKLDFDQPAPVLDEEDEATLAAIDRGIKAADEGRVVPLEEVRQRMHEWLTKSSSPTTR*
Ga0137407_105472811	3300012930	Vadose Zone Soil	MEEVKKSGLDDDCAPILEEEDEATLAAIDRGIKAADEGRVVAHEEVRKRMQQWATKSSTPMTR*
Ga0137407_110485602	3300012930	Vadose Zone Soil	MAEVKKQDFGEPAPILDEEDEATLAAIDRGIKAADEGRFLPLGEVRQRMRQWLTKSSSPKTR*
Ga0181517_106163612	3300014160	Bog	MGGLRNEDFDQSAPILDEEDEATLAAIDRGVQSADDGRLVPLEEVRQRMNRWLTKSSSPKTRSVI*
Ga0182024_1000019758	3300014501	Permafrost	MAEVKKRDLVEPDSILDEENEPTLAAIDRGIKAADEGRVVSFEEARRRLHEWLTRSSSQKTRS*
Ga0182024_100764721	3300014501	Permafrost	MADSKKPVVEDASSILDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTN*
Ga0187879_107989391	3300017946	Peatland	SAPILDEEDEATLAAIDRGVQSADDGRLVPLEEVRQRMNRWLTKSSSPKTRSVI
Ga0187863_100863712	3300018034	Peatland	MGGLRNEDFDQSAPILDEEDEATLAAIDRGVQSADDGRLVPLEEVRQRMNRWLTKSSSPKTRSVI
Ga0137408_10905002	3300019789	Vadose Zone Soil	MAEVKKQDFGEPAPILDEEDEATLAAIDRGIKATDEGRVLPLGEVRQRMRQWLTKSSSPETR
Ga0137408_11044894	3300019789	Vadose Zone Soil	MEEVKKSGLDDDCAPILEEEDEATLAAIDRGIKAADEGRVVAHEEVRKRMQQWATKSSTPMTR
Ga0210401_1000008616	3300020583	Soil	MAEVKKRNLVETESILDEEDESTLEAIDRGIKAADEGRVVSFEEARRRLREWLTRSSSQKTRFQT
Ga0210401_104402842	3300020583	Soil	MAGEKKRDLVEPDSILDQEDEATLAAIDRGIKAADESRVVSFEEARLRLRERIIRSSSQKARS
Ga0210404_102665532	3300021088	Soil	MADLKKLEFGEPAPILDDEDEATLAAIDRAVKAADEVRVVPSEEVRKRMQEWLTKSLSLKTRES
Ga0210405_100250273	3300021171	Soil	MAEVKKQDLVEPDSILDEENEATLAAIDRGIKAADEGRIVSFEEARRRLREWLTRSSSQKTRS
Ga0210405_108387772	3300021171	Soil	LDPALLRSMPEVKKQVFDKPAPILEEEDEATLSAIERGIKAAQQGRVVPLEEVRRRMQKWPTKSSSPKTR
Ga0210388_100212986	3300021181	Soil	VGVDVKKEDVNESAPILDEEDEATLAAIDRGILSADQGRVVLLEEVRQQMHQRLTKSSSPKTR
Ga0210409_110581802	3300021559	Soil	MGKVKKVDFDEAAPILEEENEATLAAIDRGVKAANEGRVVHLEKVRQRMKTWLFSR
Ga0207699_103982801	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MADLKSREVAKPDRILDEEDETTLAAIDRGIKAANEGRVVSSEAARRRFRERLTRSSSPKTRSET
Ga0207684_104221003	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAEVKKQDYSESAPILDEEDEATLAAIDRGIKAADEGRVVPLEEVRQRMSQWLTKSSSPKTR
Ga0209131_10461005	3300026320	Grasslands Soil	MGEAREDPAKILEEEDEATLAAIDRGVRAADEGRTLPLEEVWKRLEQWFTKSSSPKTH
Ga0209648_100181757	3300026551	Grasslands Soil	MDDIRKPDVNEPASILDEEDEATLAAIDRGIKAADEGRVVSSEEVRRRMQEWLTKSSSPKTR
Ga0179587_107378131	3300026557	Vadose Zone Soil	MSPLEAFALRADPDYCRGMAEVKKQDFNESSSILDEEDEATLAAIDCGIKAADEGRVVPLAEVRRRMNQWITK
Ga0208043_10157343	3300027570	Peatlands Soil	MGEVKKLDFDADSTPILEEEDEVTLAAIDRGIKAADEGRVVPLEEVRRRMEQWESSSPKT
Ga0208827_10064695	3300027641	Peatlands Soil	MGEVKKPAFDADSTPILDQEDEATLVAIDRGIKAADEGRVVFLQEVRRRMEQRGTSSPNIPTPPGNSALPS
Ga0209040_101301363	3300027824	Bog Forest Soil	MGKAKKVDFNKPVPILEEEDEATLAAIDRGIKAADEGRVVPLEEVRQRMKTWLTKSSSPKTR
Ga0209039_100757363	3300027825	Bog Forest Soil	MGEAKKLDFGADSTSILDEEDEATLAAIDRGIKAADEGRVVPLEEVRRRMEQWATRSSSPKTR
Ga0209180_100210103	3300027846	Vadose Zone Soil	MAKTKKILDEPVPILDEEDEATLAAIDRGIKAADEGRVVSLEQVRQRIQKWFTKSSSPKT
Ga0209517_100708392	3300027854	Peatlands Soil	MGEAKKLDFGADSTPILDEEDEATLAAIDRGIKAADEGRVVPLEEVRRQMEQWAARSSSPKTR
Ga0209166_100123463	3300027857	Surface Soil	MRKLKKPNLDERVSILDGEDEETLAAIDRGVKAADEGRVVPFEKVRQRLKTWLTKSPSPKMR
(restricted) Ga0233417_100129146	3300028043	Sediment	LDFNEPPPIMEEEDEATLAAIDRGIQDADEGRVVPLDEVRKMLPQWITESDSLKPR
Ga0302222_100176803	3300028798	Palsa	MADSKKPVVEDASSILDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKSSTPTKHSSI
Ga0302228_102238432	3300028808	Palsa	EDASSILDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKSSTPTKHSSI
Ga0311352_109865202	3300029944	Palsa	KKPVVEDPSSFLDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKSSTPTKHSS
Ga0311371_101733282	3300029951	Palsa	MADSKKPVVEDASSFLDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKSSTPTKHSSI
Ga0311371_106246612	3300029951	Palsa	MAEVKKENVNQSAPMLDEEDEATLAAIDRGIQSADQVVPLEEVRQRISRWLTKSSSPKTH
Ga0311339_104912012	3300029999	Palsa	MADSKKPVVEDPSSFLDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKSSTPTKHSSI
Ga0311338_107570372	3300030007	Palsa	VLGSRSRYGVAMAEVKKENVNQSAPMLDEEDEATLAAIDRGIQSADQVVPLEEVRQRISRWLTKSSSPKTH
Ga0311353_115016631	3300030399	Palsa	VLGSRSRYCVAMGGLRNEDFDQSAPILDEEDEATLAAIDRGVQSADDGRLVPLEEVRQRMNRWLTKSSSPKTRSVI
Ga0302183_103474641	3300030509	Palsa	LGSRSRYCVAMGGLRNEDFDQSAPILDEEDEATLAAIDRGVQSADDGRLVPLEEVRQRMNRWLTKSSSPKTRSVI
Ga0311372_115006551	3300030520	Palsa	LVPGFLSRYCLVMADAKNEDINQSVPILDEEDEATLAAIDRGIQSADARRVVSLEDVRQRMNGWLTKSSSPKTR
Ga0311355_107444022	3300030580	Palsa	KPVVEDASSILDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKSSTPTKHSSI
Ga0310039_103203532	3300030706	Peatlands Soil	VKKPAFDADSTPILDQEDEATLVAIDRGIKAADEGRVVFLQEVRRRMEQRGTSSPNIPTPPGNSALPS
Ga0302325_101097744	3300031234	Palsa	LYPNWLVFASLSRYRCGVAEMKKKDVDESAPILDEEDEATLAAIDRGIRSADQGRVVPLEEVRQRMNRWITKSSSPKTR
Ga0302325_107495922	3300031234	Palsa	MADAKNEDINQSVPILDEEDEATLAAIDRGIQSADARRVVSLEDVRQRMNGWLTKSSSPKTR
Ga0302325_110430732	3300031234	Palsa	MADSKKPVVEDASSFLDEEDEATLAAIDRGIKAADEGRVVPAKEVRQRMQQWLRKSSTPTKHSSI
Ga0302324_1004572761	3300031236	Palsa	MADSKKPVVEDASSILDEEDEATLAAIDRGIKAADEGRVVPAEEVRQRMQQWLTKS
Ga0247727_111967221	3300031576	Biofilm	MGEVKKLDFNDPGPILDEEDEATLAAIDRGVKAADEGRVVPLDEVRQRMQTWLTKSSSLKTLDAPEGRKSGG
Ga0310686_1001275632	3300031708	Soil	MGEQKREDLKLSAPILDEEDEATLSAIDRGVRAADEGRVVTLEEARKRMHQWRTKSSSPKTR
Ga0310686_1034981822	3300031708	Soil	MSELEKLDFDESRSILDNEDEATIAAIDRGIKAADEGRVVPLEDVRQRMHKWLSKPSSPKTR
Ga0310813_101343392	3300031716	Soil	MLRSRHSLALQPLQGYGRGMAEVKKQDFCESAPILDKEDEATLAAIDRGIKAADEGRVLPLGEVRQRMRQGLTKSPSPKTR
Ga0307469_108746332	3300031720	Hardwood Forest Soil	MAEVKKQDFGEPAPILDEEDEATLAAIDRGIKATDEGRVLPSGEVRQRMRQWLTKSSSPKTR
Ga0307477_100240324	3300031753	Hardwood Forest Soil	MAEVEKRNLVETESILDEEEESTLEAIDRGIKAADEGRVVSFEEARRRLREWLTRSSSQKTRFQT
Ga0307475_100505265	3300031754	Hardwood Forest Soil	MAEVKKRSLVETESILDEEDESTLEAIDRGIKAADEGRVVSFEEARRRLREWLTRSSSQKTRFQT
Ga0307478_113178572	3300031823	Hardwood Forest Soil	MAEVKKQVFDVPAPILEEEDEATLSAIERGVKAAEEGRVVPLEEVRRRMQKWPIKSSSP
Ga0307479_104373263	3300031962	Hardwood Forest Soil	MAEVKKQVFDIPAPILEEEDEATLSAIERGIKAAQERRVVPLEEVRRRMQQWPTRSSSPKMR
Ga0348332_100704391	3300032515	Plant Litter	QKREDLKLSAPILDEEDEATLSAIDRGVRAADEGRVVTLEEARKRMHQWRTKSSSPKTR
Ga0335081_117892571	3300032892	Soil	KKLDFGADSTPILDEEDEATLAAIDRGIQAADEGRVVPLEEVRRRMEQWAARSSSPKTR
Ga0335074_1000678216	3300032895	Soil	MAEGENKKSSESVAILNEEDEATLAAIDRGIRSAEQGRVVDLEEVRQRMSRWLTRSSLPKMR
Ga0310810_100263222	3300033412	Soil	MLRSRHSLALQPLQGYGRGMAEVKKQDFCESAPILDKEDEATLAAIDRGIKAADEGRVLPLGEVRQRMRQWLTKSPSPKTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters