Metagenome Family F073841

Basic Information
Family ID	F073841
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	43 residues
Representative Sequence	NGGGVAFFAHVGGFVFGVIVALLLTNAGRVAPQDRSGALRAPA
Number of Associated Samples	105
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.67 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (67.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.167 % of family members)
Environment Ontology (ENVO)	Unclassified (43.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.44% β-sheet: 0.00% Coil/Unstructured: 60.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04972	BON	16.67
PF01594	AI-2E_transport	8.33
PF03706	LPG_synthase_TM	8.33
PF00196	GerE	5.83
PF10646	Germane	4.17
PF01694	Rhomboid	2.50
PF07730	HisKA_3	2.50
PF10009	DUF2252	2.50
PF06210	DUF1003	1.67
PF13462	Thioredoxin_4	1.67
PF03729	DUF308	1.67
PF07731	Cu-oxidase_2	1.67
PF06803	DUF1232	1.67
PF00582	Usp	0.83
PF00456	Transketolase_N	0.83
PF00903	Glyoxalase	0.83
PF00174	Oxidored_molyb	0.83
PF02163	Peptidase_M50	0.83
PF04261	Dyp_perox	0.83
PF05173	DapB_C	0.83
PF13396	PLDc_N	0.83
PF01061	ABC2_membrane	0.83
PF06293	Kdo	0.83
PF00437	T2SSE	0.83
PF12713	DUF3806	0.83
PF14241	Obsolete Pfam Family	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	8.33
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	8.33
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	2.50
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	2.50
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	2.50
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.50
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	2.50
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.67
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	1.67
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	1.67
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.67
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.83
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.83
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.83
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.83
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.83
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.50 %
Unclassified	root	N/A	32.50 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	8.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.33 %
Unclassified	root	N/A	32.50 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	8.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.50 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	8.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	8.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.83 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	0.83 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	0.83 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.83 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0813425	Not Available	1374	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105375189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1071	Open in IMG/M
3300000550\|F24TB_10747978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300000789\|JGI1027J11758_11851216	Not Available	518	Open in IMG/M
3300000956\|JGI10216J12902_101794457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1042	Open in IMG/M
3300000956\|JGI10216J12902_103664610	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300000956\|JGI10216J12902_112876203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	710	Open in IMG/M
3300000956\|JGI10216J12902_116469392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1174	Open in IMG/M
3300000956\|JGI10216J12902_116812855	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300001431\|F14TB_100048806	Not Available	1044	Open in IMG/M
3300002074\|JGI24748J21848_1059075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300004479\|Ga0062595_101718619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300004643\|Ga0062591_102948171	Not Available	505	Open in IMG/M
3300005161\|Ga0066807_1003092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1330	Open in IMG/M
3300005164\|Ga0066815_10090731	Not Available	562	Open in IMG/M
3300005332\|Ga0066388_105832714	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005334\|Ga0068869_100710086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300005338\|Ga0068868_100662600	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005338\|Ga0068868_101608189	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005435\|Ga0070714_101800934	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005447\|Ga0066689_10550412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300005454\|Ga0066687_10388623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300005471\|Ga0070698_102155027	Not Available	511	Open in IMG/M
3300005529\|Ga0070741_11188562	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005536\|Ga0070697_100701728	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005536\|Ga0070697_101928823	Not Available	529	Open in IMG/M
3300005563\|Ga0068855_100191914	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300005564\|Ga0070664_101591487	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005764\|Ga0066903_100610663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1893	Open in IMG/M
3300005764\|Ga0066903_105326263	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300005764\|Ga0066903_107707355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	554	Open in IMG/M
3300005844\|Ga0068862_100743403	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005983\|Ga0081540_1104177	Not Available	1215	Open in IMG/M
3300006028\|Ga0070717_10385235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M
3300006058\|Ga0075432_10534496	Not Available	527	Open in IMG/M
3300006175\|Ga0070712_101013849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300006175\|Ga0070712_101630165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300006755\|Ga0079222_10925563	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300006796\|Ga0066665_11324087	Not Available	554	Open in IMG/M
3300006844\|Ga0075428_101754427	Not Available	647	Open in IMG/M
3300006852\|Ga0075433_10158956	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300006871\|Ga0075434_101783026	Not Available	622	Open in IMG/M
3300006881\|Ga0068865_101061271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300006914\|Ga0075436_101320225	Not Available	546	Open in IMG/M
3300009137\|Ga0066709_100059285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4399	Open in IMG/M
3300009147\|Ga0114129_13324576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300009176\|Ga0105242_11563003	Not Available	692	Open in IMG/M
3300009553\|Ga0105249_10012176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7574	Open in IMG/M
3300010326\|Ga0134065_10056414	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1223	Open in IMG/M
3300010366\|Ga0126379_10695544	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300010371\|Ga0134125_10345675	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300010373\|Ga0134128_11210009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300010399\|Ga0134127_11066148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	871	Open in IMG/M
3300010403\|Ga0134123_10427676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300011269\|Ga0137392_10529506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300012200\|Ga0137382_10589403	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300012201\|Ga0137365_10905350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300012209\|Ga0137379_10589926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300012211\|Ga0137377_11816932	Not Available	529	Open in IMG/M
3300012349\|Ga0137387_11076476	Not Available	574	Open in IMG/M
3300012354\|Ga0137366_10560429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300012356\|Ga0137371_10304346	Not Available	1241	Open in IMG/M
3300012357\|Ga0137384_11606579	Not Available	500	Open in IMG/M
3300012930\|Ga0137407_10091004	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2593	Open in IMG/M
3300012971\|Ga0126369_13695654	Not Available	501	Open in IMG/M
3300012984\|Ga0164309_10807546	Not Available	756	Open in IMG/M
3300012986\|Ga0164304_11308286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300012986\|Ga0164304_11508084	Not Available	556	Open in IMG/M
3300012987\|Ga0164307_10763179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	765	Open in IMG/M
3300012988\|Ga0164306_11355112	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012988\|Ga0164306_11438678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300012989\|Ga0164305_10099842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1860	Open in IMG/M
3300012989\|Ga0164305_11566631	Not Available	587	Open in IMG/M
3300012989\|Ga0164305_12060654	Not Available	522	Open in IMG/M
3300013102\|Ga0157371_10833742	Not Available	696	Open in IMG/M
3300013296\|Ga0157374_11273674	Not Available	757	Open in IMG/M
3300013297\|Ga0157378_11710462	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300014745\|Ga0157377_11118295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300015200\|Ga0173480_10658659	Not Available	651	Open in IMG/M
3300017959\|Ga0187779_10180732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1312	Open in IMG/M
3300017966\|Ga0187776_10677280	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300018027\|Ga0184605_10468070	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300018058\|Ga0187766_10583074	All Organisms → cellular organisms → Bacteria → Terrabacteria group	762	Open in IMG/M
3300018071\|Ga0184618_10004588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3778	Open in IMG/M
3300018075\|Ga0184632_10242404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	789	Open in IMG/M
3300019361\|Ga0173482_10132143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	949	Open in IMG/M
3300019361\|Ga0173482_10372516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300020018\|Ga0193721_1129269	Not Available	628	Open in IMG/M
3300020022\|Ga0193733_1079054	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300021377\|Ga0213874_10427992	Not Available	519	Open in IMG/M
3300021968\|Ga0193698_1020745	Not Available	858	Open in IMG/M
3300024186\|Ga0247688_1006188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1677	Open in IMG/M
3300025906\|Ga0207699_10471325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300025923\|Ga0207681_11630462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300025931\|Ga0207644_10453376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1054	Open in IMG/M
3300025931\|Ga0207644_11210145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300025932\|Ga0207690_10099687	Not Available	2072	Open in IMG/M
3300025935\|Ga0207709_11519339	Not Available	556	Open in IMG/M
3300025937\|Ga0207669_10780391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300026118\|Ga0207675_100327082	Not Available	1498	Open in IMG/M
3300026894\|Ga0207980_1015350	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300027874\|Ga0209465_10434133	Not Available	657	Open in IMG/M
3300028710\|Ga0307322_10004130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3064	Open in IMG/M
3300028717\|Ga0307298_10033518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1372	Open in IMG/M
3300028793\|Ga0307299_10178360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300028796\|Ga0307287_10059040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300028811\|Ga0307292_10522345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300028819\|Ga0307296_10301259	Not Available	874	Open in IMG/M
3300028885\|Ga0307304_10288531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300031231\|Ga0170824_121220925	All Organisms → cellular organisms → Bacteria → Terrabacteria group	623	Open in IMG/M
3300031720\|Ga0307469_11655129	Not Available	616	Open in IMG/M
3300031740\|Ga0307468_100728044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300031782\|Ga0318552_10440407	Not Available	665	Open in IMG/M
3300032025\|Ga0318507_10331956	Not Available	662	Open in IMG/M
3300032770\|Ga0335085_12184446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300032782\|Ga0335082_11602388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300032954\|Ga0335083_10929224	Not Available	689	Open in IMG/M
3300033158\|Ga0335077_10136959	Not Available	2826	Open in IMG/M
3300033475\|Ga0310811_10783508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300034817\|Ga0373948_0071554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.50%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.50%
Sediment	Environmental → Aquatic → Sediment	2.50%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.17%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08134254	2228664021	Soil	NGGGVAFFAHIGGFVFGVVVARVLSNLGQVAPQDGSAALRAPA
INPhiseqgaiiFebDRAFT_1053751892	3300000364	Soil	AFFAHVGGFVFGALVAWVLVGAGRVSPQGVSPAFPSG*
F24TB_107479781	3300000550	Soil	NGGGVAFFAHVGGFVFGVIVALLLTNAGRVAPQDRSGALRAPA*
JGI1027J11758_118512161	3300000789	Soil	VAFFAHIGGFVFGVVVARVLSNLGQVAPQDGSAALRAPA*
JGI10216J12902_1017944574	3300000956	Soil	AFFAHVGGFVFGVIVALLLTNAGRVTPQDRSGTLSAPA*
JGI10216J12902_1036646102	3300000956	Soil	GGVAFFAHVGGFVFGVAVAVLLTSAGRVAPQSGTALRPA*
JGI10216J12902_1128762031	3300000956	Soil	GGVAFFAHVGGFVFGVLVALVLTKSGRVAPQDRSAVLGAPRLAS*
JGI10216J12902_1164693921	3300000956	Soil	VGGFVFGVLVALLLTNSGRVTPQDRSVALRAPAY*
JGI10216J12902_1168128555	3300000956	Soil	NGGGVAFFAHVGGFVFGVLAALLLTNTGLVAPQDRSSPLRAPA*
F14TB_1000488063	3300001431	Soil	AHVGGFVFGVIVALLLTNAGRVAPQDRSAALRAPA*
JGI24748J21848_10590752	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	KANGGGVAFFAHVGGFLFGVAVAFLLSNLGRVTAQDEGQALRVPA*
Ga0062595_1017186192	3300004479	Soil	GGTAFFAHVGGFVFGALVTLVLTNVGRVVPQDDTALRAPA*
Ga0062591_1029481712	3300004643	Soil	GSAANGGGVAFFAHVGGFLFGVIVTLLLTHAGRVAPQDRSRALGAPA*
Ga0066807_10030922	3300005161	Soil	MLGASANGDGTAFFAHVGGFVFGALVALLLASAGRVAPQDGTALRAPA*
Ga0066815_100907311	3300005164	Soil	GGVAFFAHVGGFLFGALVAWLVTGAGLVAPQDRSGALRAPA*
Ga0066388_1058327141	3300005332	Tropical Forest Soil	NGGGVAFFAHVGGFLFGVLVALLLAGVGRVTSDTGGSAPAGAAA*
Ga0068869_1007100863	3300005334	Miscanthus Rhizosphere	ANGGGVAFFAHVGGFVFGVLAARVLSTLGQVAPQDGSAALRAPA*
Ga0068868_1006626001	3300005338	Miscanthus Rhizosphere	GVAFFAHVGGFVFGALVAWLLKTAGRVAPQGGSPPPLRAPA*
Ga0068868_1016081891	3300005338	Miscanthus Rhizosphere	GGTAFFAHVGGFVFGALVALVLANAGRVAPQESTALRAPA*
Ga0070714_1018009341	3300005435	Agricultural Soil	NGGGVAFFAHVGGFVFGAIVAWLLTGAGVVAPQDRSAALRTA*
Ga0066689_105504122	3300005447	Soil	ANGGGVAFFAHVGGFIFGVSVALLLTSAGRVVPQGSSPLRAPA*
Ga0066687_103886231	3300005454	Soil	FGATANGGGVAFFAHVGGFLFGAAVAQLLTSAGRVVPQGGIPARVPV*
Ga0070698_1021550271	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAFFAHVGGFVFGALIAWLLAAAGRAGAEPEPAPLRAWG*
Ga0070741_111885622	3300005529	Surface Soil	GLFSASANGGGVAFFAHVGGFLFGVLVTTALAARGRIAPQEAGLPALRAPAW*
Ga0070697_1007017282	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FGASANGGGVAFFAHVGGFVFGVIVAVLLKSAGRVAPQDSAPLGAPA*
Ga0070697_1019288231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LFGASANGGGVAFFAHVGGFVFGAIVALLLTSVGRVVPQDGSSALRAPA*
Ga0068855_1001919141	3300005563	Corn Rhizosphere	ANGGGVAFFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARAPAY*
Ga0070664_1015914871	3300005564	Corn Rhizosphere	GGVAFFAHVGGFVFGAIVAWLLTGAGVVAPQDRSAALRTA*
Ga0066903_1006106633	3300005764	Tropical Forest Soil	VAFFAHVGGFVFGVIVTLFLGRTGWIDAQDRSTPLPAPGLIAR*
Ga0066903_1053262631	3300005764	Tropical Forest Soil	GGVAFFAHVGGFVFGVLVARLLLGSGRIVLGRDRPVGVPV*
Ga0066903_1077073553	3300005764	Tropical Forest Soil	ANGGGVAFFAHVGGFVFGVVVTLALTHAGRIAPNTGAAASPAPT*
Ga0068862_1007434033	3300005844	Switchgrass Rhizosphere	FFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARAPAY*
Ga0081540_11041774	3300005983	Tabebuia Heterophylla Rhizosphere	AHVGGFVFGALVTLLLTKSGRVAPQDRSIAWGGAPA*
Ga0070717_103852354	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GLLGASANGGGTAFFAHVGGFVFGALVSLALASAGRVVPQDGAVLRAPA*
Ga0075432_105344962	3300006058	Populus Rhizosphere	FFAHVGGFVFGAIVARVLVGVGQVAPQEGGTALRAPA*
Ga0070712_1010138491	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FFAHVGGFIFGVLVTLLLRGLGRISPQDLSTGAVGAPAY*
Ga0070712_1016301651	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FFAHVGGFIFGAIVAWTLVGVGLVVRPDGNPPLRTPAGAL*
Ga0079222_109255632	3300006755	Agricultural Soil	GGGVAFFAHVGGFVFGALVAWLLKTAGRVAPQGGSPPPLRAPA*
Ga0066665_113240871	3300006796	Soil	HVGGFVFGAIVAWLLTGAGLVAPQDRSAALRAPA*
Ga0075428_1017544273	3300006844	Populus Rhizosphere	ANGGGVAFFAHVGGFVFGAILTLVLARAGQVAAPNGRASPAHA*
Ga0075433_101589561	3300006852	Populus Rhizosphere	VAFFAHIGGFVFGAIVAWALMAAGRAAPQGGSPPLRAPA*
Ga0075434_1017830262	3300006871	Populus Rhizosphere	ANGGGVAFFAHVGGFVFGVIVTLLLTRTGQIEKQDRSTALPAPV*
Ga0068865_1010612711	3300006881	Miscanthus Rhizosphere	VGGFVFGAIVAWLLTGAGLVAPQDRSTAARAPAY*
Ga0075436_1013202251	3300006914	Populus Rhizosphere	GVAFFAHVGGFVFGAIVAWLLTGTGLVAPQDRSAAARAPAY*
Ga0066709_1000592857	3300009137	Grasslands Soil	FAHVGGFVLGFVVARILAGVGRVAPDDNGFPLRAPA*
Ga0114129_133245761	3300009147	Populus Rhizosphere	SANGGGTAFFAHVGGFLFGVVVALVLAGAGRVAPQDSTALRAPA*
Ga0105242_115630031	3300009176	Miscanthus Rhizosphere	GGGVAFFAHVGGFVFGAIVAWLLTGVGVVAPQDRSAALRPA*
Ga0105249_100121769	3300009553	Switchgrass Rhizosphere	SNGGGTAFFAHVGGFVFGVLVAWLLLQSGRIAGQERSVPLGGPA*
Ga0134065_100564144	3300010326	Grasslands Soil	IEPNVGLFGASANGGGVAFFVHVDGFLIGLIIALVLTRVGRVAPQDGGQPARVPA*
Ga0126379_106955441	3300010366	Tropical Forest Soil	NGGGVAFFAHVGGFVFGVIVTLLLTNAGRISPQDRSQILGAPA*
Ga0134125_103456751	3300010371	Terrestrial Soil	IFSSSANGGGVAFFAHVGGFVFGALVAWLLKTAGRVAPQGGSPPPLRAPA*
Ga0134128_112100092	3300010373	Terrestrial Soil	GVFSSSANGGGVAFFAHVGGFIFGAIVAWTLVGVGLVVRPDGDPPLRTPAGAL*
Ga0134127_110661481	3300010399	Terrestrial Soil	ANGGGTAFFAHVGGFVFGAVVALLLANAGRVAPQESTALRAPA*
Ga0134123_104276761	3300010403	Terrestrial Soil	NFGLFGSAANGGGVAFFAHVGGFVFGVIVALLLTNAGRVAPQDRSGPLRAPA*
Ga0137392_105295061	3300011269	Vadose Zone Soil	QLVEANFGLFGSTANGGGVAFFAHVGGFLFGVSVALLLTSIGRVAPQDTSPLRAPA*
Ga0137382_105894031	3300012200	Vadose Zone Soil	GLFSSNANGGGVAFFAHVGGFIFGAIVATLLSSSGRIASDANTDTGAGLMRAPA*
Ga0137365_109053502	3300012201	Vadose Zone Soil	ANGGGTAFFAHVGGFVFGALVALLLANAGRVAPQDGAPLRVSA*
Ga0137379_105899261	3300012209	Vadose Zone Soil	NFGIFGSAANGGGVAFFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARASAY*
Ga0137377_118169322	3300012211	Vadose Zone Soil	FGATANGGGVAFFAHVGGFLFGVVVAQLLASAGRVAPQGDGSALRVPA*
Ga0137387_110764761	3300012349	Vadose Zone Soil	HVGGFVFGAIVAWLLTGAGLVAPQDRSAALPAPA*
Ga0137366_105604292	3300012354	Vadose Zone Soil	FAHVGGFIFGAIVAAVLTGAGRVAPQEGSAFLRAPA*
Ga0137371_103043461	3300012356	Vadose Zone Soil	FFAHVGGFVFGAIVAWLLTGAGLVTPQDRSGVLRAPA*
Ga0137384_116065792	3300012357	Vadose Zone Soil	VAFFAHVGGFVFGALVAWLLTGVGLVAPQDRSAALRAPA*
Ga0137407_100910041	3300012930	Vadose Zone Soil	ANFGIFGSAANGGGVAFFAHVGGFVFGAIVAWLLTGAGLVTPQDRSAVLRAPA*
Ga0126369_136956541	3300012971	Tropical Forest Soil	ANGGGVAFFAHVGGFVFGVIVTLLLTNAGRISPQDRSQILGAPA*
Ga0164309_108075461	3300012984	Soil	FFAHVGGFVFGVIVAWLLTNTGRVTPQDRSAALGAPA*
Ga0164304_113082861	3300012986	Soil	NGGGVAFFAHVGGFIFGVAVAAFLSSLGRVAPQDGGQALLRAST*
Ga0164304_115080841	3300012986	Soil	ATSNGGGTAFFAHVGGFVFGVLVAWLLLQSGRIAGQERSVPLGGPA*
Ga0164307_107631792	3300012987	Soil	FFAHVGGFVFGVVVARLLVQAGRVAGEERGVPLGGPA*
Ga0164306_113551122	3300012988	Soil	AANGGGVAFFAHVGGFAFGYLVTRFLTDSGRVVPADVSLPLRAPA*
Ga0164306_114386782	3300012988	Soil	NFGLFGSSANGGGVAFFAHVGGFVFGDFVAKLLTDAGRVTPQQNREPLGAFT*
Ga0164305_100998421	3300012989	Soil	NGGGVAFFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARAPAY*
Ga0164305_115666313	3300012989	Soil	GVAFFAHVGGFVFGVIVAWLLTNTGRVTPQDRSAALGAPA*
Ga0164305_120606541	3300012989	Soil	NGGGVAFFAHVGGFVFGVIVALVLTRTGQIAAQDRSAALPAPG*
Ga0157371_108337421	3300013102	Corn Rhizosphere	TSNGGGTAFFAHVGGFVFGVLVAWLLVQSGRIAGQERSVPLGGPA*
Ga0157374_112736743	3300013296	Miscanthus Rhizosphere	GVAFFAHVGGFVFGAIVAWLLTGVGVVAPQDRSAALRPA*
Ga0157378_117104622	3300013297	Miscanthus Rhizosphere	AHVGGFVFGVLVAWVLVNAGRVVTSDTTALRAPA*
Ga0157377_111182953	3300014745	Miscanthus Rhizosphere	AHVGGFVFGAIVAWLLTGAGVVAPQDRSTAARAPAY*
Ga0173480_106586593	3300015200	Soil	FAHVGGFVFGVLVAIVLTNAGRVQPQDYGGTVLRAPA*
Ga0187779_101807321	3300017959	Tropical Peatland	AFFAHVGGFVFGVIVTLLLKNARQVALKDRSGMLRAPA
Ga0187776_106772802	3300017966	Tropical Peatland	FFAHVGGFVFGVAATLALLNARRITPQGEDALGAPA
Ga0184605_104680703	3300018027	Groundwater Sediment	FGSAANGGGVAFFAHVGGFVFGVIVALLLTNAGRVAPQDRSGALGAPA
Ga0187766_105830743	3300018058	Tropical Peatland	FFAHVGGFVFGVIVTLLLKNAGQVALQDRSGVLRAPA
Ga0184618_100045884	3300018071	Groundwater Sediment	GGGVAFFAHVGGFVFGVSVAVLLTSVGRVVPQDSGPLRAPA
Ga0184632_102424041	3300018075	Groundwater Sediment	ANGGGVAFFAHVGGFVFGVLVAWLLTRAGRVAANERAPEFGAPA
Ga0173482_101321433	3300019361	Soil	AFFAHVGGFVFGVVVARLLTGAGWVAPQDRSAALRAPA
Ga0173482_103725161	3300019361	Soil	NGGGVAFFAHVGGFIFGVVAALFLSSIGRVAPQGGGQPVRVSA
Ga0193721_11292692	3300020018	Soil	GGVAFFAHVGGFVFGVIVALLLRNAGRLVPQDSGGALRAPA
Ga0193733_10790541	3300020022	Soil	FSSSANGGGVAFFAHVGGFVFGAIVTWLLMGTRRISAQDMAALRAPT
Ga0213874_104279921	3300021377	Plant Roots	VAFFAHVGGFIFGVIVALGLTRAGRVAPDTGAAAAPA
Ga0193698_10207452	3300021968	Soil	NGGGVAFFAHVGGFIFGAAVAWALTSVGRVAPQSVAAGAGLRAPV
Ga0247688_10061884	3300024186	Soil	FAHVGGFVFGALVSLALASAGRVVPQDGAVLRAPA
Ga0207699_104713251	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GGGVAFFAHVGGFIFGAIVAWILVGAGRVIRPDGNPPLRAPAGAL
Ga0207681_116304623	3300025923	Switchgrass Rhizosphere	FAHVGGFVFGAIVAWLLTGAGLVDPQDRSTAARAPAY
Ga0207644_104533762	3300025931	Switchgrass Rhizosphere	VAFFAHVGGFVFGAFVAKLLTDAGRVTPQQNREPLGAFT
Ga0207644_112101452	3300025931	Switchgrass Rhizosphere	GGGTAFFAHVGGFVFGALVSLALASAGRVVPQDGAVLRAPA
Ga0207690_100996874	3300025932	Corn Rhizosphere	AFFAHVGGFVFGAIVAWLLTGAGVVAPQDRSAALRTA
Ga0207709_115193392	3300025935	Miscanthus Rhizosphere	GTAFFAHVGGFVFGVLVAWLLLQSGRIAGQERSVPLGGPA
Ga0207669_107803912	3300025937	Miscanthus Rhizosphere	GGVAFFAHVGGFVFGAIVAWILVGAGRVVRPDGNPPLRAPAGAL
Ga0207675_1003270821	3300026118	Switchgrass Rhizosphere	NFGLFGSAANGGGVAFFAHVGGFLFGVIVALLLTKAGRVAPQDRSATLGAPA
Ga0207980_10153502	3300026894	Soil	MLGASANGDGTAFFAHVGGFVFGALVALLLASAGRVAPQDGTALRAPA
Ga0209465_104341333	3300027874	Tropical Forest Soil	NGGGVAFFAHVGGFVFGVIVALLLTSAGRIAPQDRSRTLGAPA
Ga0307322_100041301	3300028710	Soil	AANGGGVAFFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARAPAY
Ga0307298_100335181	3300028717	Soil	ANGGGVAFFAHVGGFIFGAIVAWILVGAGRVIRPDGNPPLRAPAGAL
Ga0307299_101783602	3300028793	Soil	NANGGGVAFFAHVGGFAFGAIVAWVLTDVGRIAPQGHTAGLRAPA
Ga0307287_100590404	3300028796	Soil	NFGIFGSAANGGGVAFFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARAPAY
Ga0307292_105223452	3300028811	Soil	GASANGGGVAFFAHVGGFAFGAIVAWVLTDVGRIAPQGDTAGLRAPA
Ga0307296_103012592	3300028819	Soil	ATANGGGVAFFAHVGGFLFGVVVAQLLANAGRVAPQGDGSALRVPA
Ga0307304_102885311	3300028885	Soil	ANFGIFGSAANGGGVAFFAHVGGFVFGVIVALLLRNAGRLVPQDSGGALRAPA
Ga0170824_1212209251	3300031231	Forest Soil	NGGGVAFFAHVGGFIFGVAVALLLTTAGRVGPQDRSGALGALA
Ga0307469_116551291	3300031720	Hardwood Forest Soil	NAGLFSSTANGGGTAFFAHVGGFVFGVLIAWLLKQAGRVTPQEPAVPLGAPV
Ga0307468_1007280441	3300031740	Hardwood Forest Soil	GTAFFAHVGGFVFGALAALLLASAGRVAPQDGTALRAPA
Ga0318552_104404071	3300031782	Soil	YQLIEANFGLFGAAANGGGVAFFAHVGGFVFGVVVALALERGSSIGSQARGQPLHAPA
Ga0318507_103319561	3300032025	Soil	LIEANFGLFGAAANGGGVAFFAHVGGFVFGVVVALALERGGSIGSQARGQPLHATA
Ga0335085_121844461	3300032770	Soil	SSANGGGVAFFAHVGGFVFGVITTLALAGAGRISPTEDMGALRATA
Ga0335082_116023881	3300032782	Soil	FGFFSSSANGGGGVAFFAHVGGFIFGVAVTMGLLNAGRVATRDDRALGATI
Ga0335083_109292243	3300032954	Soil	GVAFFAHVGGFLFGLVVALALMNAGRVVPQDGSAAFGTT
Ga0335077_101369591	3300033158	Soil	GGGVAFFAHVGGFLFGLLVALALLNAGRVVPQDGSAAFGAA
Ga0310811_107835081	3300033475	Soil	ANGGGVAFFAHVGGFVFGAIVAWLLTGAGLVAPQDRSTAARVPAY
Ga0373948_0071554_2_118	3300034817	Rhizosphere Soil	FFAHVGGFVFGALVAWLLKTAGRVAPQGGSPPPLRAPA

Hidden Markov Model


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