Metagenome / Metatranscriptome Family F073863

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073863
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	73 residues
Representative Sequence	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAP
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.50 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	88.33 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.667 % of family members)
Environment Ontology (ENVO)	Unclassified (59.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.58% β-sheet: 22.11% Coil/Unstructured: 66.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02604	PhdYeFM_antitox	2.50
PF17197	DUF5134	1.67
PF06974	WS_DGAT_C	1.67
PF00578	AhpC-TSA	1.67
PF12840	HTH_20	1.67
PF00664	ABC_membrane	0.83
PF00756	Esterase	0.83
PF02627	CMD	0.83
PF03861	ANTAR	0.83
PF03965	Penicillinase_R	0.83
PF02683	DsbD	0.83
PF00005	ABC_tran	0.83
PF03437	BtpA	0.83
PF00392	GntR	0.83
PF08450	SGL	0.83
PF12867	DinB_2	0.83
PF04237	YjbR	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	2.50
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	2.50
COG0434	Membrane biogenesis protein, BtpA/SgcQ family	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.83
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.83
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.83
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.83
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.83
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.83
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
All Organisms	root	All Organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
cellular organisms	root	All Organisms → cellular organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	15.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.17 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	1.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.67 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.83 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.67 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.83 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10202145	Not Available	538	Open in IMG/M
3300005332\|Ga0066388_102474114	Not Available	943	Open in IMG/M
3300005337\|Ga0070682_100549229	Not Available	904	Open in IMG/M
3300005471\|Ga0070698_100209214	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300005764\|Ga0066903_104952112	Not Available	707	Open in IMG/M
3300006175\|Ga0070712_100029881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3656	Open in IMG/M
3300006175\|Ga0070712_100314059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1272	Open in IMG/M
3300006175\|Ga0070712_101109173	Not Available	687	Open in IMG/M
3300006796\|Ga0066665_10733559	Not Available	782	Open in IMG/M
3300007076\|Ga0075435_100742806	Not Available	854	Open in IMG/M
3300009094\|Ga0111539_10154014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2690	Open in IMG/M
3300009147\|Ga0114129_12322628	Not Available	643	Open in IMG/M
3300009551\|Ga0105238_10304061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1579	Open in IMG/M
3300009792\|Ga0126374_10597858	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300010046\|Ga0126384_10071526	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300010048\|Ga0126373_10491740	Not Available	1268	Open in IMG/M
3300010048\|Ga0126373_11215607	Not Available	820	Open in IMG/M
3300010358\|Ga0126370_10127032	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300010358\|Ga0126370_11903681	Not Available	578	Open in IMG/M
3300010358\|Ga0126370_12346225	Not Available	529	Open in IMG/M
3300010360\|Ga0126372_12757741	Not Available	543	Open in IMG/M
3300010361\|Ga0126378_10872390	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010361\|Ga0126378_11284624	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300010361\|Ga0126378_11618784	Not Available	735	Open in IMG/M
3300010366\|Ga0126379_10848714	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300010366\|Ga0126379_11456295	Not Available	791	Open in IMG/M
3300010371\|Ga0134125_12888419	Not Available	522	Open in IMG/M
3300010376\|Ga0126381_100182124	All Organisms → cellular organisms → Bacteria	2791	Open in IMG/M
3300010376\|Ga0126381_100624548	Not Available	1535	Open in IMG/M
3300010376\|Ga0126381_101454061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991	Open in IMG/M
3300012198\|Ga0137364_10943873	Not Available	653	Open in IMG/M
3300012201\|Ga0137365_10846050	Not Available	668	Open in IMG/M
3300012206\|Ga0137380_10054306	All Organisms → cellular organisms → Bacteria	3671	Open in IMG/M
3300012211\|Ga0137377_10401707	Not Available	1308	Open in IMG/M
3300012351\|Ga0137386_11252819	Not Available	516	Open in IMG/M
3300012971\|Ga0126369_12995773	Not Available	553	Open in IMG/M
3300016341\|Ga0182035_11282772	Not Available	655	Open in IMG/M
3300016387\|Ga0182040_10669864	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300016404\|Ga0182037_11417122	Not Available	615	Open in IMG/M
3300020070\|Ga0206356_11634987	Not Available	586	Open in IMG/M
3300020075\|Ga0206349_1400706	Not Available	500	Open in IMG/M
3300021178\|Ga0210408_11365594	Not Available	535	Open in IMG/M
3300021560\|Ga0126371_10876949	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300025898\|Ga0207692_10365639	Not Available	892	Open in IMG/M
3300025916\|Ga0207663_11600778	Not Available	524	Open in IMG/M
3300025981\|Ga0207640_10793914	Not Available	820	Open in IMG/M
3300027725\|Ga0209178_1066839	Not Available	1168	Open in IMG/M
3300027775\|Ga0209177_10301249	Not Available	611	Open in IMG/M
3300027909\|Ga0209382_11224909	Not Available	766	Open in IMG/M
3300028828\|Ga0307312_10666438	Not Available	689	Open in IMG/M
3300031469\|Ga0170819_15688956	Not Available	523	Open in IMG/M
3300031474\|Ga0170818_110809078	Not Available	603	Open in IMG/M
3300031544\|Ga0318534_10175826	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300031544\|Ga0318534_10287997	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300031544\|Ga0318534_10723420	Not Available	562	Open in IMG/M
3300031544\|Ga0318534_10804421	Not Available	528	Open in IMG/M
3300031544\|Ga0318534_10878239	Not Available	502	Open in IMG/M
3300031640\|Ga0318555_10056252	Not Available	2008	Open in IMG/M
3300031668\|Ga0318542_10633186	Not Available	558	Open in IMG/M
3300031679\|Ga0318561_10309224	Not Available	865	Open in IMG/M
3300031679\|Ga0318561_10492938	Not Available	675	Open in IMG/M
3300031680\|Ga0318574_10725744	Not Available	582	Open in IMG/M
3300031681\|Ga0318572_10017015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	3583	Open in IMG/M
3300031681\|Ga0318572_10967905	Not Available	505	Open in IMG/M
3300031719\|Ga0306917_10321809	Not Available	1198	Open in IMG/M
3300031723\|Ga0318493_10680636	Not Available	576	Open in IMG/M
3300031744\|Ga0306918_10787040	Not Available	743	Open in IMG/M
3300031747\|Ga0318502_10849502	Not Available	554	Open in IMG/M
3300031748\|Ga0318492_10004953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5089	Open in IMG/M
3300031751\|Ga0318494_10205204	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300031751\|Ga0318494_10265504	Not Available	986	Open in IMG/M
3300031764\|Ga0318535_10089722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1337	Open in IMG/M
3300031764\|Ga0318535_10151060	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031764\|Ga0318535_10497219	Not Available	542	Open in IMG/M
3300031768\|Ga0318509_10706401	Not Available	559	Open in IMG/M
3300031769\|Ga0318526_10240164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300031770\|Ga0318521_10487923	Not Available	740	Open in IMG/M
3300031771\|Ga0318546_10073621	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300031771\|Ga0318546_10312095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1090	Open in IMG/M
3300031771\|Ga0318546_11346264	Not Available	501	Open in IMG/M
3300031777\|Ga0318543_10457687	Not Available	572	Open in IMG/M
3300031778\|Ga0318498_10357681	Not Available	651	Open in IMG/M
3300031779\|Ga0318566_10021128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2889	Open in IMG/M
3300031781\|Ga0318547_10329895	Not Available	930	Open in IMG/M
3300031782\|Ga0318552_10657805	Not Available	534	Open in IMG/M
3300031794\|Ga0318503_10252052	Not Available	573	Open in IMG/M
3300031795\|Ga0318557_10239674	Not Available	830	Open in IMG/M
3300031796\|Ga0318576_10232492	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300031798\|Ga0318523_10026293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2595	Open in IMG/M
3300031798\|Ga0318523_10680056	Not Available	505	Open in IMG/M
3300031799\|Ga0318565_10485414	Not Available	597	Open in IMG/M
3300031819\|Ga0318568_10424452	Not Available	829	Open in IMG/M
3300031819\|Ga0318568_11032912	Not Available	507	Open in IMG/M
3300031821\|Ga0318567_10285789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	929	Open in IMG/M
3300031845\|Ga0318511_10549967	Not Available	536	Open in IMG/M
3300031846\|Ga0318512_10024028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2549	Open in IMG/M
3300031859\|Ga0318527_10329083	Not Available	651	Open in IMG/M
3300031880\|Ga0318544_10154291	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031890\|Ga0306925_10410612	Not Available	1450	Open in IMG/M
3300031912\|Ga0306921_10064409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4190	Open in IMG/M
3300031912\|Ga0306921_10167336	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2575	Open in IMG/M
3300031947\|Ga0310909_10826555	Not Available	764	Open in IMG/M
3300031947\|Ga0310909_11044876	Not Available	666	Open in IMG/M
3300031981\|Ga0318531_10127204	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300031981\|Ga0318531_10245724	Not Available	808	Open in IMG/M
3300032001\|Ga0306922_10711752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1056	Open in IMG/M
3300032001\|Ga0306922_11253046	Not Available	752	Open in IMG/M
3300032008\|Ga0318562_10901537	Not Available	504	Open in IMG/M
3300032009\|Ga0318563_10646326	Not Available	569	Open in IMG/M
3300032043\|Ga0318556_10705551	Not Available	525	Open in IMG/M
3300032044\|Ga0318558_10481706	Not Available	619	Open in IMG/M
3300032054\|Ga0318570_10500792	Not Available	554	Open in IMG/M
3300032059\|Ga0318533_10990992	Not Available	616	Open in IMG/M
3300032066\|Ga0318514_10203683	Not Available	1037	Open in IMG/M
3300032066\|Ga0318514_10742544	Not Available	522	Open in IMG/M
3300032066\|Ga0318514_10804023	Not Available	500	Open in IMG/M
3300032067\|Ga0318524_10392602	Not Available	723	Open in IMG/M
3300032068\|Ga0318553_10436591	Not Available	686	Open in IMG/M
3300032089\|Ga0318525_10496877	Not Available	624	Open in IMG/M
3300032090\|Ga0318518_10149098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1188	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.00%
Host-Associated	Host-Associated	5.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Plants	Host-Associated → Plants	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_102021452	3300002906	Grasslands Soil	LSRTADPALRVLVVWVPFLGGSRNAINPSIFPDSRVTSLWDQNAVSSQWFSQHVTSQPGPTWDYYLLFGPRA
Ga0066388_1024741141	3300005332	Tropical Forest Soil	MTCLAGASWVQNNILSRMSDPALRVLVVWLPFVAGTRTAINPSILADPRVTDFWDPHAITSQWLSRHVTHQLGPTWDYYLLFGARARWATVP
Ga0070682_1005492291	3300005337	Corn Rhizosphere	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTNEPGPTWDYYLLFSPRARWGAVP
Ga0070698_1002092144	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VQSNILSKMSDPALRVFVVWVPFLGGSKGAINPAVLPDNRVTSLWDGHAISSQWFSRHVTRQPFPTWDYYMLFPPSARWGSVPG
Ga0066903_1049521121	3300005764	Tropical Forest Soil	MSRMADPALRVLVVWVPFLGGSRHAINPAIFPDGRVTSWWDPGAVSSQWFSTHLTQQPGPTWDYYL
Ga0070712_1000298816	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPALRVLVVWVPFLSGTRSAINPSVLPDHRVTSLWDQHALSSQWFSRHVTGQPGPTWDYY
Ga0070712_1003140591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTNEPGPTWDYYLLFSPRARWGAVPGPVV
Ga0070712_1011091732	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTCLAGASWVQSNILSRMADPALRVLVVWVPFLNGSRGAINPSVLPDSRVTSLWDQNALSSQWFSQQVTSQPGPTWDYYMLFSSRARWGAVPGP
Ga0066665_107335591	3300006796	Soil	VQSNVLSRTADPALRVIVVWVPFLGGTRGAVNSSLFPDRRVISLWDASAVSSQWFSQHVTRQPGPTWDYYL
Ga0075435_1007428061	3300007076	Populus Rhizosphere	VQSNILSRTADPALRVLVVWVPFLNGSRGAINSSIFPDSRVTSLWDASAVSSQWFSQHVTNQPGPTWDYYL
Ga0111539_101540145	3300009094	Populus Rhizosphere	VQNNILSRSPDPALRVFVVWVPFLGGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTRQPGPTWDYYL
Ga0114129_123226281	3300009147	Populus Rhizosphere	VFVVWVPFLAGSRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYYLLFAPRARWGAVPGPVVSQGG
Ga0105238_103040611	3300009551	Corn Rhizosphere	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVISLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFPP
Ga0126374_105978583	3300009792	Tropical Forest Soil	MTCLAGASWVQNNVLSRNPDPALRVFVVWVPFLQGTRGAINSSVFPDSRVTYLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFG
Ga0126384_100715261	3300010046	Tropical Forest Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSVFPDSRVTYLWDQNAVSSRWFSQHVTSQLGPTWDYYLLFSPRARWGAAPGP
Ga0126373_104917403	3300010048	Tropical Forest Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSRWFSQHVTGQPGPTWDYYLLFGPRARW
Ga0126373_112156073	3300010048	Tropical Forest Soil	VQSNILARTTSPNLAVFVVWVPFLAGTRQAVNTSVLPDSRVTDMWDGSALSSQWFSAHVTHAGGPTWDYYLLFGPHAHWGATPGPIV
Ga0126370_101270323	3300010358	Tropical Forest Soil	MADPALRVVVVWVPFLGGSRGAINPSVFPDTRVTSLWDQKAVSSQWFSQHVTGQPGPTWDYYLLFSPRARWGAV
Ga0126370_119036811	3300010358	Tropical Forest Soil	MADPALRVLVVWVPFLGGSRSAINPSVFPDTRVTSLWDQNAVSSQWFSQHVTGQPGPTWD
Ga0126370_123462251	3300010358	Tropical Forest Soil	MTCLAGDSWVQSNVLSRMSDPALRVLVVWVPFLGGTRGAINSSVFPDNRVTSLWDAKATSSQWFSQHVTKFPGPTWDYYMLFGPRA
Ga0126372_127577412	3300010360	Tropical Forest Soil	MADPALRVLVVWVPFLGGSRHAINPAIFPDSRVTSLWDPGAVSSQWFSTHVTQQPGPT*
Ga0126378_108723901	3300010361	Tropical Forest Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTGQPRPTWDYYLLFSPRARWGATPRP
Ga0126378_112846243	3300010361	Tropical Forest Soil	MTCLAGASWVQNNVLSRNPDPALRVFVVWVPFMQGNRGAINPSIFPDSRVTYLWDQNEVSSQWFSRHVTGQPGPTWDYYLLFGPRARW
Ga0126378_116187841	3300010361	Tropical Forest Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDTRVTSLWDQNAVSSQWFSRHVTGQPGPTWDYYLLFSPRARW
Ga0126379_108487141	3300010366	Tropical Forest Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSIFPDSRVTYLWDQNAVSSPWFSRHVTNQLGPTWDYYLLFPPRARWG
Ga0126379_114562952	3300010366	Tropical Forest Soil	VIWVPFLNGTRAAINPSIFPGSRVTSFWDGTAMSSQWFSQHVTNQPDPTWDYYLLFSPQAHWGAVPGPVASQG
Ga0134125_128884192	3300010371	Terrestrial Soil	WVQSNILSRMADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTNEPGPTWDYYLLFLPGPGGVPFPGRS*
Ga0126381_1001821241	3300010376	Tropical Forest Soil	VQSNILSQTADPALRVLVVWVPFLGGSRGAINSSTFPDSRVTSLWDASAVSSQWFSQHVTGQP
Ga0126381_1006245481	3300010376	Tropical Forest Soil	VQSNILSHPDPALRVLVVWVPFMAGTRQAINTSVFPGRGVTQFWDPGAVTSQWLSRHVTHQGGP
Ga0126381_1014540611	3300010376	Tropical Forest Soil	VQSNILSRDTDPGLRVLVIWVPFLDGSRAAINPSVLPDSRVTYLWDSNAISSTWFSQHLTHRLGPTWDYYL
Ga0137364_109438731	3300012198	Vadose Zone Soil	VFVVWVPFLGGSRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFGPGARWGAVP
Ga0137365_108460501	3300012201	Vadose Zone Soil	VQNNILSRSPDPALRVFVVWVPFLGATRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTRQPGPTWDYYLLFGPRARWG
Ga0137380_100543065	3300012206	Vadose Zone Soil	VQSNILSQMPDPRLRVFAVWVPFLGGSRGAVRPAIFADSRVTDLWDQNAISSQWFSAHLTRLPGPTWDYYLLFGPRARWAAVPGPV
Ga0137377_104017071	3300012211	Vadose Zone Soil	VQSNILSQIPDPRLRVFAVWVPFMGGSRGAVRPAIFADSRVTDLWDQNAISSQWFSAHLTRLPGPTWDYYLLFGPRA
Ga0137386_112528192	3300012351	Vadose Zone Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSQHVTGQPG
Ga0126369_129957732	3300012971	Tropical Forest Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSQHVTNEPGPTWDYYLLF
Ga0182035_112827722	3300016341	Soil	VALRVFVVWVPFLNGTRNAINPSVFPDARVTSLWDGGAVSSQWFAQHVTHQ
Ga0182040_106698643	3300016387	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSVFPDSRVTYLWDRSAVSSQWFSQHVTGQPGPTWD
Ga0182037_114171221	3300016404	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVTSLWDQNAVSSQWFSQH
Ga0206356_116349872	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVISLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFPPR
Ga0206349_14007062	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVISLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFPPRA
Ga0210408_113655942	3300021178	Soil	MADPALRVLVVWVPFMSGSRGAINTSIFPDGRVTSLWDQGEVSSQWFSRYVTKQPGPTWDYYMLFPA
Ga0126371_108769491	3300021560	Tropical Forest Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINRSVFPDRRVTYLWDQNAVSSQWFSQHVTSQMGPTWDYYLLF
Ga0207692_103656393	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VQSNILSRNPDPALRVFVVWVPFLGGSRSAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFGPGA
Ga0207663_116007782	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSRHVTNEPGPTWDYYLLFSP
Ga0207640_107939141	3300025981	Corn Rhizosphere	VQNNILSRSPDPALRVFVVWVPFLGGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTRQPGPTWDYYLLFGPRARWGAVPGP
Ga0209178_10668393	3300027725	Agricultural Soil	MADPALRVLVVWVPFLGGSRGAINPAVFPDSRVTSLWDQNAVSSQWFSQHLTNEPGPTWDYYLLFP
Ga0209177_103012491	3300027775	Agricultural Soil	MADPALRVLVVWVPFLGGSRGAVNPAVFPDSRVTSLWDQDAVSSQWFSQHVTGQLGPTWDYYLLFPARARWGAVPGPV
Ga0209382_112249092	3300027909	Populus Rhizosphere	VQNNILSRSPDPALRVFVVWVPFLGGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTRQPGPTWDYYLLFGPRARWGAVPGPV
Ga0307312_106664381	3300028828	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTNEPSPTWDYYLLFSPRA
Ga0170819_156889561	3300031469	Forest Soil	VQSNILSRLTDPALRVLVVWVPFLGGSRGAINPAVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFPARARWGAVPGPVV
Ga0170818_1108090782	3300031474	Forest Soil	MTCLAGASWVQNNILSRNPDAALRVFVVWVPFLQGTRGAINPSVFPDSRVTYLWDQNAVSSQWFSQHVTSQLGPTWDYYL
Ga0318534_101758264	3300031544	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYL
Ga0318534_102879973	3300031544	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYYLLFSPRARWGAVPG
Ga0318534_107234202	3300031544	Soil	VQSNILSKNADPALRVLVVWVPFLNGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLL
Ga0318534_108044212	3300031544	Soil	VQSNILSKMADPALGVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSRHVTGQPGPTWDY
Ga0318534_108782392	3300031544	Soil	VQSSILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVASLWDQNAVSSQWFSQHVTGQPGPTWD
Ga0318555_100562524	3300031640	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWD
Ga0318542_106331861	3300031668	Soil	VALRVFVVWVPFLNGTRNAINPSVFPDARVTSLWDGGAVSSQWFAQHVTHQPGPCWDYYLLFSSRARWG
Ga0318561_103092241	3300031679	Soil	VQSNILSRMADPALRVLVIWVPFLNGSRSAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPVPTWDYYLLFPARARWGAVPG
Ga0318561_104929381	3300031679	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTG
Ga0318574_107257442	3300031680	Soil	MTDPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSRHVTNEPGPTWDYYLLFPARARWGAVPGPIT
Ga0318572_100170155	3300031681	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDNRVTSLWDQDAVSSQWFSRHVTGQPGPTWD
Ga0318572_109679051	3300031681	Soil	MADPALRVLVVWVPFLGGSRGAINPAVFPDSRVTSLWDQDAVSSQWFSRHVTNEPGPTWDYYLLFPA
Ga0306917_103218093	3300031719	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAPRARW
Ga0318493_106806362	3300031723	Soil	VQSNILSRDANPALRVFVVWVPFLNGTRNAINPSVFPDTRVTSLWDGGAVSSQWFSQHVTHQPGPTWDYYLLFSSRA
Ga0306918_107870402	3300031744	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTC
Ga0318502_108495021	3300031747	Soil	VQSNILSKNADPALRVLVVWVPFLNGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYL
Ga0318492_100049533	3300031748	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDNRVTSLWDQDAVSSQWFSRHVTGQPGPTWDYYLLFPPRARWGAAIRPLLR
Ga0318494_102052041	3300031751	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYY
Ga0318494_102655041	3300031751	Soil	VVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAISSRWFSQHVTGQPGPTWDYYLLFSSRARWG
Ga0318535_100897223	3300031764	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVASLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAPRARWDAVP
Ga0318535_101510603	3300031764	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRSAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYY
Ga0318535_104972192	3300031764	Soil	MTDPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSRHVTNEPGPTW
Ga0318509_107064012	3300031768	Soil	VQSNILSQAADPALRVLVVWVPFLGGSRGAINSSILPDGRVTSLWDQKAISSQWFSQHVTGQPGPTWDYYLLFPAGARWGTVPGHML
Ga0318526_102401643	3300031769	Soil	VQSNILSTITDPGLRVFAVWVPFLDGSRAAINPSVFPDSRVTSLWDGGAVSSAWFSQHVTQQPGPTWDYY
Ga0318521_104879232	3300031770	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSILPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYY
Ga0318546_100736211	3300031771	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINASVFPDSRVTYLWDQNAVSSQWFSQHVTSQQGPTWDYYLLFGPRARWGAAPGPV
Ga0318546_103120953	3300031771	Soil	VALRVFVVWVPFLNGTRNAINPSVFPDARVTSLWDGGAVSSQWFAQHVTHQPGPCWD
Ga0318546_113462642	3300031771	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDY
Ga0318543_104576871	3300031777	Soil	MADPALRVLVVWVPFLGGSRSAINPSVFPDSRVTSLWDQDAVSSQWFSQHVTTEPGPT
Ga0318498_103576812	3300031778	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSVFPDSRVTYLWDQNAVSSQWFSQHVTGQQGPTWDYYLL
Ga0318566_100211281	3300031779	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINASVFPDSRVTYLWDQNAVSSQWFSQHVTGQQGPTWDYYLLFG
Ga0318547_103298952	3300031781	Soil	VQSNILSRDANPALRVFVVWVPFLNGTRNAINPSVFPDTRVTSLWDGGAVSSQWFSQHVTHQP
Ga0318552_106578051	3300031782	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRDAINPSIFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAPRARW
Ga0318503_102520522	3300031794	Soil	VQSNILSQAADPALRVLVVWVPFLGGSRGAINSSILPDGRVTSLWDQKAISSQWFSQHVTGQPGPTWDYYLLFPAGAR
Ga0318557_102396741	3300031795	Soil	VALRVFVVWVPFLNGTRNAINPSVFPDARVTSLWDGGAVSSQWFAQHVTHQPGPCWDYYLLFSSRARWGAVPG
Ga0318576_102324923	3300031796	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSVFPDSRVTYLWDQNAVSSQWFSQHVTGQQGPTWD
Ga0318523_100262931	3300031798	Soil	VQSNILSQAADPALRVLVVWVPFLGGSRGAINSSILPDGRVTSLWDQKAISSQWFSQHVTGQPG
Ga0318523_106800561	3300031798	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVASLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAPR
Ga0318565_104854141	3300031799	Soil	LSRTSDPGLRVFVIWVPFLNGTRTAINPSIFPGSRVISFWDGTAMSSQWFSQHVTNQPGPTWDYYLLFSP
Ga0318568_104244522	3300031819	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPT
Ga0318568_110329121	3300031819	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRSAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYYLLFSPRARWGA
Ga0318567_102857892	3300031821	Soil	VQSNILSKNADPALRVLVVWVPFLNGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDF
Ga0318511_105499671	3300031845	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVASLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFTSR
Ga0318512_100240288	3300031846	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYY
Ga0318527_103290831	3300031859	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDTVSSQWFSQHVTNEPGPTW
Ga0318544_101542913	3300031880	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRSAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYYLLFSPRARWGAVPGPV
Ga0306925_104106123	3300031890	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDNRVTSLWDQDAVSSQWFSRHVTGQPGPTWDYYLL
Ga0306921_100644097	3300031912	Soil	VQSNILSQAADPALRVLVVWVPFLGGSRGAINSSILPDGRVTSLWDQKAISSQWFSQHVTGQPGPTWDYYLLFPAGA
Ga0306921_101673363	3300031912	Soil	MADPALRVLVIWVPFLNGSRSAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPVPTWDYYLLF
Ga0310909_108265553	3300031947	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSRHVTNEPGPTWDYYLLFPARARWGAVPGPIMSQ
Ga0310909_110448762	3300031947	Soil	VQSNILSRMADPALRVLVIWVPFLNGSRSAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPVPTWDY
Ga0318531_101272043	3300031981	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRSAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYYL
Ga0318531_102457241	3300031981	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFSPRARWG
Ga0306922_107117522	3300032001	Soil	VQSNILSKNADPALRVLVVWVPFLNGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFPPRA
Ga0306922_112530463	3300032001	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRSAINPSIFPDSRVTYLWDQNAVSSQWFSQHVTSQPGPTWDYYLLFSP
Ga0318562_109015372	3300032008	Soil	MTCLAGASWVQNNILSRNPDPALRVFVVWVPFLQGTRGAINPSVFPDSRVTYLWDQNAVSSQWFSQHVTGQQGPTWDYYLLFGPRAHW
Ga0318563_106463261	3300032009	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDTVSSQWFSQHVTNEPGPTWDYYLLFPPRARWG
Ga0318556_107055511	3300032043	Soil	VQNNILTRNPDPGLRVLVVWVPFLNGSQAAINPSVLPDSRVTYLWDSNAISSTWFSQHLTHQLGPTWDYYLLFGPRA
Ga0318558_104817061	3300032044	Soil	MADPALRVLVVWVPFLGGSRGAVNPSVFPDSRVTSLWDQNAVSSRWFSRHVTGQPGPTWDYYLLFAPRARWGAVPGWPVTCREN
Ga0318570_105007922	3300032054	Soil	VQSNILSKNADPALRVLVVWVPFLNGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYY
Ga0318533_109909922	3300032059	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAP
Ga0318514_102036832	3300032066	Soil	MADPALRVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQNAVSSQWFSQHVTGQPGP
Ga0318514_107425441	3300032066	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSILPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLL
Ga0318514_108040232	3300032066	Soil	MADPALGVLVVWVPFLGGSRGAINPSVFPDSRVTSLWDQDAVSSQWFSRHVTGQPGPTWDYYLLFPA
Ga0318524_103926021	3300032067	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDY
Ga0318553_104365911	3300032068	Soil	VQSNILSRDANPALRVFVVWVPFLNGTRNAINPSVFPDTRVTSLWDGGAVSSQWFSQHVTHQPGPTWD
Ga0318525_104968772	3300032089	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSILPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAPRARWDAVPGP
Ga0318518_101490983	3300032090	Soil	VQSNILSRTADPALRVLVVWVPFLGGSRGAINPSIFPDSRVTSLWDQNAVSSQWFSQHVTGQPGPTWDYYLLFAPRARWDAVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073863

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences