Metagenome / Metatranscriptome Family F073882

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073882
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	65 residues
Representative Sequence	MVESQWRALYRAAILELDPKRLQARVKAAEDAIHARASSEARVSRDERREMNDALSTLRILKRKQS
Number of Associated Samples	64
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.67 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	63.33 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.667 % of family members)
Environment Ontology (ENVO)	Unclassified (56.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (91.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.32% β-sheet: 0.00% Coil/Unstructured: 44.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13545	HTH_Crp_2	24.17
PF00072	Response_reg	16.67
PF04338	DUF481	5.83
PF01103	Omp85	2.50
PF06965	Na_H_antiport_1	1.67
PF13620	CarboxypepD_reg	1.67
PF04264	YceI	1.67
PF00691	OmpA	1.67
PF00497	SBP_bac_3	0.83
PF13426	PAS_9	0.83
PF04831	Popeye	0.83
PF10677	DUF2490	0.83
PF11737	DUF3300	0.83
PF13581	HATPase_c_2	0.83
PF01594	AI-2E_transport	0.83
PF04909	Amidohydro_2	0.83
PF10282	Lactonase	0.83
PF13683	rve_3	0.83
PF00487	FA_desaturase	0.83
PF06863	DUF1254	0.83
PF00884	Sulfatase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3137	Putative salt-induced outer membrane protein YdiY	Cell wall/membrane/envelope biogenesis [M]	5.83
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.67
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.67
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.83
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.83
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.83
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.83 %
Unclassified	root	N/A	24.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.83 %
Unclassified	root	N/A	24.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.83 %
Unclassified	root	N/A	24.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.17 %
Unclassified	root	N/A	24.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.00 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	5.00 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.00 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	3.33 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.67 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003224\|JGI26344J46810_1020725	Not Available	555	Open in IMG/M
3300003350\|JGI26347J50199_1007643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300003367\|JGI26338J50219_1008409	Not Available	833	Open in IMG/M
3300003367\|JGI26338J50219_1016168	Not Available	638	Open in IMG/M
3300003505\|JGIcombinedJ51221_10178377	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300004082\|Ga0062384_100251215	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300004091\|Ga0062387_100732725	Not Available	728	Open in IMG/M
3300004091\|Ga0062387_100817152	Not Available	696	Open in IMG/M
3300004152\|Ga0062386_100055643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2984	Open in IMG/M
3300004635\|Ga0062388_100709599	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005541\|Ga0070733_10000333	All Organisms → cellular organisms → Bacteria	39823	Open in IMG/M
3300005591\|Ga0070761_10000292	All Organisms → cellular organisms → Bacteria	33271	Open in IMG/M
3300005591\|Ga0070761_10005368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	7515	Open in IMG/M
3300005591\|Ga0070761_10010279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5281	Open in IMG/M
3300005591\|Ga0070761_10060573	Not Available	2138	Open in IMG/M
3300005591\|Ga0070761_10081634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1844	Open in IMG/M
3300005591\|Ga0070761_10506487	Not Available	745	Open in IMG/M
3300005591\|Ga0070761_11108564	Not Available	504	Open in IMG/M
3300005602\|Ga0070762_10114095	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300005712\|Ga0070764_10149691	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005921\|Ga0070766_10067846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2046	Open in IMG/M
3300005921\|Ga0070766_10222050	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300005921\|Ga0070766_10634623	Not Available	719	Open in IMG/M
3300006174\|Ga0075014_100430301	Not Available	725	Open in IMG/M
3300006176\|Ga0070765_100015832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	5478	Open in IMG/M
3300006176\|Ga0070765_100022183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	4776	Open in IMG/M
3300006176\|Ga0070765_100068430	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300006176\|Ga0070765_100900583	Not Available	836	Open in IMG/M
3300011120\|Ga0150983_14484987	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300017928\|Ga0187806_1204539	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300017933\|Ga0187801_10336448	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300017955\|Ga0187817_11104030	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300020579\|Ga0210407_10000544	All Organisms → cellular organisms → Bacteria → Acidobacteria	41896	Open in IMG/M
3300020579\|Ga0210407_10207860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1521	Open in IMG/M
3300020579\|Ga0210407_11366226	Not Available	527	Open in IMG/M
3300020580\|Ga0210403_10000736	All Organisms → cellular organisms → Bacteria	32989	Open in IMG/M
3300020580\|Ga0210403_10994408	Not Available	657	Open in IMG/M
3300020581\|Ga0210399_10180705	All Organisms → cellular organisms → Bacteria → Acidobacteria	1751	Open in IMG/M
3300020581\|Ga0210399_10365488	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300020581\|Ga0210399_10603595	Not Available	908	Open in IMG/M
3300020582\|Ga0210395_10007017	All Organisms → cellular organisms → Bacteria	8537	Open in IMG/M
3300020582\|Ga0210395_10026645	All Organisms → cellular organisms → Bacteria	4243	Open in IMG/M
3300020582\|Ga0210395_10139389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1806	Open in IMG/M
3300020583\|Ga0210401_10001079	All Organisms → cellular organisms → Bacteria	32444	Open in IMG/M
3300020583\|Ga0210401_10004447	All Organisms → cellular organisms → Bacteria	14648	Open in IMG/M
3300020583\|Ga0210401_10131367	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300020583\|Ga0210401_10138722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	2275	Open in IMG/M
3300020583\|Ga0210401_10210184	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300020583\|Ga0210401_11038188	Not Available	678	Open in IMG/M
3300021170\|Ga0210400_10008596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8351	Open in IMG/M
3300021170\|Ga0210400_10314052	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300021171\|Ga0210405_10085567	All Organisms → cellular organisms → Bacteria → Acidobacteria	2486	Open in IMG/M
3300021171\|Ga0210405_10775347	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300021180\|Ga0210396_10200156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1785	Open in IMG/M
3300021180\|Ga0210396_10425343	Not Available	1166	Open in IMG/M
3300021180\|Ga0210396_11733925	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300021181\|Ga0210388_10047144	All Organisms → cellular organisms → Bacteria → Acidobacteria	3584	Open in IMG/M
3300021181\|Ga0210388_10238022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1597	Open in IMG/M
3300021181\|Ga0210388_10735797	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300021181\|Ga0210388_11185599	Not Available	648	Open in IMG/M
3300021401\|Ga0210393_10269277	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300021401\|Ga0210393_10454560	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300021402\|Ga0210385_10225724	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300021405\|Ga0210387_10843546	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300021406\|Ga0210386_10031110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4190	Open in IMG/M
3300021420\|Ga0210394_10508106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300021420\|Ga0210394_11129462	Not Available	675	Open in IMG/M
3300021432\|Ga0210384_10232632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1659	Open in IMG/M
3300021432\|Ga0210384_10330873	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300021432\|Ga0210384_10499278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300021433\|Ga0210391_10332829	Not Available	1191	Open in IMG/M
3300021433\|Ga0210391_11241407	Not Available	576	Open in IMG/M
3300021474\|Ga0210390_10019572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	5494	Open in IMG/M
3300021474\|Ga0210390_11277775	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300021475\|Ga0210392_10418854	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300021477\|Ga0210398_10088535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2514	Open in IMG/M
3300021477\|Ga0210398_10810515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300024225\|Ga0224572_1013469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1560	Open in IMG/M
3300024227\|Ga0228598_1000430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	8555	Open in IMG/M
3300024271\|Ga0224564_1064282	Not Available	726	Open in IMG/M
3300026467\|Ga0257154_1001022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3132	Open in IMG/M
3300026467\|Ga0257154_1001105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3050	Open in IMG/M
3300026467\|Ga0257154_1024042	Not Available	897	Open in IMG/M
3300026467\|Ga0257154_1058675	Not Available	601	Open in IMG/M
3300026515\|Ga0257158_1060843	Not Available	710	Open in IMG/M
3300027109\|Ga0208603_1000877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4949	Open in IMG/M
3300027371\|Ga0209418_1082755	Not Available	576	Open in IMG/M
3300027619\|Ga0209330_1001598	All Organisms → cellular organisms → Bacteria	6635	Open in IMG/M
3300027698\|Ga0209446_1009946	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300027729\|Ga0209248_10000874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9511	Open in IMG/M
3300027729\|Ga0209248_10032566	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300027737\|Ga0209038_10000267	All Organisms → cellular organisms → Bacteria	16833	Open in IMG/M
3300027783\|Ga0209448_10148906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300027795\|Ga0209139_10029726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300027853\|Ga0209274_10003508	All Organisms → cellular organisms → Bacteria	7496	Open in IMG/M
3300027867\|Ga0209167_10004136	All Organisms → cellular organisms → Bacteria	7412	Open in IMG/M
3300027884\|Ga0209275_10025500	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300027889\|Ga0209380_10285731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300028015\|Ga0265353_1004244	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300028037\|Ga0265349_1013418	Not Available	724	Open in IMG/M
3300028906\|Ga0308309_10003066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9986	Open in IMG/M
3300028906\|Ga0308309_10005661	All Organisms → cellular organisms → Bacteria	7564	Open in IMG/M
3300028906\|Ga0308309_10209589	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300028906\|Ga0308309_10672649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300031040\|Ga0265754_1033819	Not Available	537	Open in IMG/M
3300031708\|Ga0310686_100966309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2601	Open in IMG/M
3300031708\|Ga0310686_101801900	All Organisms → cellular organisms → Bacteria → Acidobacteria	23098	Open in IMG/M
3300031708\|Ga0310686_106309828	All Organisms → cellular organisms → Bacteria → Acidobacteria	2327	Open in IMG/M
3300031708\|Ga0310686_106790341	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300031708\|Ga0310686_107357876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2551	Open in IMG/M
3300031708\|Ga0310686_110607624	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300031708\|Ga0310686_112445056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300031708\|Ga0310686_112730252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300031708\|Ga0310686_113573018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300031708\|Ga0310686_113798797	Not Available	667	Open in IMG/M
3300031715\|Ga0307476_10311976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300031823\|Ga0307478_10002435	All Organisms → cellular organisms → Bacteria	14643	Open in IMG/M
3300031823\|Ga0307478_10733358	Not Available	828	Open in IMG/M
3300032205\|Ga0307472_100456671	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300034163\|Ga0370515_0047729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1894	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.33%
Host-Associated	Host-Associated	1.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.50%
Aquatic	Environmental → Aquatic	15.83%
Plants	Host-Associated → Plants	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.50%
Freshwater	Environmental → Aquatic → Freshwater	15.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.67%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.33%
Loam	Environmental → Terrestrial → Soil → Loam	23.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	19.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003224	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3	Environmental	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26344J46810_10207251	3300003224	Bog Forest Soil	RGGCLAPRELKMVESNWRDLYRAAILELDPKRLQARVKAAEDAIQARASGEARVSRDERREMNDALSTLRILKRKQP*
JGI26347J50199_10076433	3300003350	Bog Forest Soil	AAILELDPKRLQARVKAAEDAIHARGTSEARVSRDERREMNDALSTLRILKRK*
JGI26338J50219_10084092	3300003367	Bog Forest Soil	MVESQWRDLYRAAILELDPKRLQARVKAAEDAINARASCEARVSRDERREMTDALSTLRILKRKQS*
JGI26338J50219_10161682	3300003367	Bog Forest Soil	MAESQWRALYRAAILELDPKRLQARVKAAEDTINARASSEVRISRDERREMNDALSTLRILKRKQS*
JGIcombinedJ51221_101783771	3300003505	Forest Soil	MVESQWRALYKAAILELDPKQLEARVKAAENAISARQASEARISREEGRAIDDALSVLRALKRKQS*
Ga0062384_1002512151	3300004082	Bog Forest Soil	MVESQWRTLYRAAILELDPKRLQARVKAAEDAIHARGTSEARVSRDERREMNDAL
Ga0062387_1007327252	3300004091	Bog Forest Soil	MVESQWRDLHRAAILELNPKQLRARVKASEDAINGRASRDTRVPREERKAMDDALPALRVLKRKQY*
Ga0062387_1008171521	3300004091	Bog Forest Soil	MVESQWRSLYRAAILELDPKQLQARVKAAEEAIHARTSSGARVSRDERREMEDALSTMRILKAKKS*
Ga0062386_1000556434	3300004152	Bog Forest Soil	MVESQWRGLYRAAILELDPKRLQGRVKAAEDAIHARAASGARVSRDEKREMDDALSTLRILKRKQS*
Ga0062388_1007095991	3300004635	Bog Forest Soil	LPLRELEMVESPWRDLYRAAILELDPKQLQARVKAAEDAINARTSCGGRVSRDERREMNDALSTLRILKHKQS*
Ga0070733_1000033319	3300005541	Surface Soil	LPLQELKLVENQWRELYRAAILELDPKRLQGRVKAAEDAIHARGSSAARISRDERREMNDALSTLRILKREQS*
Ga0070761_1000029224	3300005591	Soil	MVESPWRDLYRAAILELDPKQLQARVKAAEDAINARASCGGRVSRDERREMNDALSTLRILKHKQS*
Ga0070761_100053684	3300005591	Soil	MVESQWRDLYRAAVLELDPKRLQARVKAAEDAIHARATCEARVSRDERREMDDALSTLRILKRKQS*
Ga0070761_100102795	3300005591	Soil	MVESQWRALYRAAILELDPKRLQARVKAAEDAINARASSEARISRDERTEMNDALSTLRILKRKQC*
Ga0070761_100605732	3300005591	Soil	MVESQWRELLKAAIVELDPERLQLRVKAAEEAINARASSDAPVSRDEQRAMNDALSTLRVLKKKQS*
Ga0070761_100816342	3300005591	Soil	MVESQWRNLYRAAILELDPKRLQARVKAAEDAIHARATCEARVSRDERREMNDALSTLRILKRKQS*
Ga0070761_105064872	3300005591	Soil	MVESQWRALYKAAILELDPSQVQVRVKAAEDAIHARASSDSRIPRDERRAMDDALCTLRLLKRNQS*
Ga0070761_111085642	3300005591	Soil	SYLPIQESEMAESQWRVLYRAAILELDLKLLSARVKAAEDAINARASSGARIPRDERREMDDALGTLRVLKRKHS*
Ga0070762_101140951	3300005602	Soil	MVESQWRALYRAAILELDPKRLQARVKAAEDAIHARASSEARVSRDERREMNDALSTLRILKRKQS*
Ga0070764_101496913	3300005712	Soil	MVESQWRGLYRAAILELDPKRLQGRVKAAEDAIHLRASSGARVSRDEQREMND
Ga0070766_100678463	3300005921	Soil	MVESQWRDLYRAAVLELDPKRLQARVKAAEDAIHARAACEARVSRDERREMDDALSTLRILKRKQS*
Ga0070766_102220501	3300005921	Soil	MIESEWRALYRAAILELDPKRLPALVKAAEDAIQERASSDARVPRDERREMDDALSTLRFLKR
Ga0070766_106346231	3300005921	Soil	MAESEWRALYRAAILELDPKRLPALVKAAEDAINERASPDARVPRDERREMDDALSTLRFLKRKQS*
Ga0075014_1004303012	3300006174	Watersheds	MVESQWRELYKAAILELDPKRLEVRVKAAEEAVHARVSSGARVTREERRAMDDALSTLHVLKQKQS*
Ga0070765_1000158325	3300006176	Soil	MVESQWRDLYRAAILELDPKQLQARVKAAEDAINARALNEARVSRDERREMNDALSTLRMLKRKQS*
Ga0070765_1000221837	3300006176	Soil	MVESQWRELFKAAILELDPKQLQLRVKAAEEAINARASSHARVSRDEQRAMDDALSALRVLKKKQS*
Ga0070765_1000684304	3300006176	Soil	MVESQWRNLYRAAILELDPKRLQARVKAAEDAIHARATCEGRVSRDERREMNDALSTLRILKRKQS*
Ga0070765_1009005831	3300006176	Soil	MVEHHWRDLYRAAIRELDPMRLQARVKAAEEAIHARASSGSQVSRDERREMDDALSTLRILKRKQS*
Ga0150983_144849873	3300011120	Forest Soil	MVESQWRALYKAAILELDPKQLEARVKAAENAISARQASEARISRDERRAIDDALAVLRALKRKQS*
Ga0187806_12045392	3300017928	Freshwater Sediment	MVESQWRALYKAAILELDPPRLQARVKAAEDAINAHASSKARISRNERKAMDDALSTLRVLKNGSSSNAL
Ga0187801_103364483	3300017933	Freshwater Sediment	MVESQWRALYKAAILELDPPRLQARVKAAEDAINAHASSKARISRNERKAMDDALSTLRVLKRKQV
Ga0187817_111040301	3300017955	Freshwater Sediment	RMVESQWRALYKAAILELDPQRLQACVKAAEDAINAHASSNARISRNERKAMDDALSTLRVLKRKHV
Ga0210407_1000054419	3300020579	Soil	MVEGQWRDLYRAAILEFDPKQLQARVKAAEDAIHVRAACEARVSRDERREMNDALSTPRILKRKQS
Ga0210407_102078603	3300020579	Soil	MVESPWRDLYRAAILELDPKQLQARVKAAEDAINARASCGGRVSRDERREMNDALSTLRILKHKQS
Ga0210407_113662261	3300020579	Soil	AAILELDPKQLQARVKAAEDAIHARATCEARVSRDERREMNDALSTLRILKRKQS
Ga0210403_1000073626	3300020580	Soil	MVEGQWRDLYRAAILELDPKQLQARVKAAEDAIHARATCEARVSRDERREMNDALSTLRILKRKQS
Ga0210403_109944081	3300020580	Soil	MVESQWRGLYRAAILELDPKRLQARVKAAEDAINARASSEARVSRDERREMIDALSTLRILKRKQS
Ga0210399_101807053	3300020581	Soil	MVESQWRELFKAAIIELDPEQLQLRVQAAEDAINARASSDARVSRDEQRAMNDALSTLRALKRKQS
Ga0210399_103654881	3300020581	Soil	MVESEWRDLYKAAMLELDPKQLQARVKAAEDAINARASGDARLSRDERRAMDDALSDLRVLKRKQS
Ga0210399_106035951	3300020581	Soil	MVESQWRDLYRAAVLELDPKRLQARVKAAEDAIHARATCEARVSRDERREMDDALSTLRILKRKQS
Ga0210395_100070179	3300020582	Soil	MVESQWWELLKAAIVELDPERLQLRVKAAEEAINARASSDAPVSRDEQRAMNDALSTLRVLKKKQS
Ga0210395_100266456	3300020582	Soil	MVESQWRDLYRAAVLELDPKRLQARVKAAEDAIHARAACEARVSRDERREMDDALSTLRILKRKQS
Ga0210395_101393893	3300020582	Soil	MVESQWRELFKAAIIELDPEQLQLRVQAAEDAINARASSDARVSRDEQRAMNDALSTLRALKRK
Ga0210401_1000107920	3300020583	Soil	MVESQWRALYKAAILELDPKQLEARVKAAENAISARQASEARISRDERRAIDDALAVLRALKRKQS
Ga0210401_1000444718	3300020583	Soil	MVESQWRDLYRAAILELDPKRLQARVKAAEDAIQARATCEARVSREERREMNDAVSTLRILKCKTS
Ga0210401_101313671	3300020583	Soil	VPEPELKMVESEWRALYRAAILELDPKRLPGLVKAAEEAINERASPDARVPRDERREMDDALSTLRFLKRKQS
Ga0210401_101387223	3300020583	Soil	MVESQWRELLKAAIVELDPERLQLRVKAAEEAINARASSDAPVSRDEQRAMNDALSTLRVLKKKQS
Ga0210401_102101842	3300020583	Soil	MVESQWRNLYRAAILELDPKRLQARVKAAEDAIHARATCEGRVSRDERREMNDALSTLRILKRKQS
Ga0210401_110381881	3300020583	Soil	MVEGQWRDLYRAAILELDPKRLQARVKAAEDAIHARAMCEARVSRDERREMNDALSTLRILKRKQS
Ga0210400_100085968	3300021170	Soil	MVEGQWRDLYRAAILEFDPKQLQARVKAAENAIHARAACEARVSRDERREMNDALSTPRILKRKQSKRSAVEVEEVCSN
Ga0210400_103140521	3300021170	Soil	MVESQWRGLYRAAILELDPKRLQGRVKAAEDAIHLRASSGARVSRDEQREMNDALSTLRILKRKQS
Ga0210405_100855672	3300021171	Soil	MVESQWRELFKAAIIELDPEQLQLRVQAAEDAINARASSDARVSRDKQRAMNDALSTLRVLKKKQS
Ga0210405_107753472	3300021171	Soil	MVESQWRNLYRAAILELDPKRLQARVKAAEDAIHARATCEGRVSRDERREMNDALST
Ga0210396_102001562	3300021180	Soil	MVESEWRALYRAAILELDPKRLPALVKAAEDAINERASSDARVPRDERREMDDALSTLRFLKRKQS
Ga0210396_104253432	3300021180	Soil	HLPLQEPKMVESQWRALYKAAILELDPKQLEARVKAAENAISARQASEARISREERRAIDDALSVLRALKRKQS
Ga0210396_117339251	3300021180	Soil	MVESQWRALYKAAILELDPKQLEARVKAAENAISARQASEARISREERRAIDDALSVLRALKRKQS
Ga0210388_100471442	3300021181	Soil	MVESQWRALYRAAILELDPKRLQARVKAAEDAIHARASSEARVSRDERREMNDALSTLRILKRKQS
Ga0210388_102380223	3300021181	Soil	MVESQWRGLYRAAILELDPKRLQARVKAAEDAIGERAASDARVSRDERREMNDALSTLRILKRKQS
Ga0210388_107357972	3300021181	Soil	MADMQWRDLFKAAILELDPEQLQVRVRAAEHAINGRISSGIQVSRTERKAMEDALSTLRVLKRKLF
Ga0210388_111855991	3300021181	Soil	MVESQWRDLYRAAVLELDPKRLQARVKAAEDATHARAACEARVSRDERREMDDALSTLRILKRKQS
Ga0210393_102692772	3300021401	Soil	MVESQWRDSYRAAILELDPKRLQARVKAAEDAINARASSDARISRDERREMSDALSTLRILKRKQP
Ga0210393_104545602	3300021401	Soil	MVESPWRDLYRAAILELDPKRLQTRVKEAEDAINARASSGARVSRDERREMNDALSTLQILKRKQP
Ga0210385_102257242	3300021402	Soil	MVESQWRALYKAAILELDPKQLEVRVKAAENAISARQASEARISRDERRAIDDALAVLRALKRKQS
Ga0210387_108435461	3300021405	Soil	MVEGQWRDLYRAAILELDPKRLQARVKAAEDAINLRALSGARVSRDEQREMIDALSTLRILKRKQS
Ga0210386_100311106	3300021406	Soil	MVESEWRALYRAAILELDPKRLPGLVKAAEEAINERASPDARVPRDERREMDDALSTLRFLKRKQS
Ga0210394_105081062	3300021420	Soil	YRAAILELDPKRLPGLVKAAEEAINERASPDARVPRDERREMDDALSTLRFLKRKQS
Ga0210394_111294622	3300021420	Soil	MVESQWRVLYRAAILELDPKRIQSRVKAAEDAINLRASGGARVSRDEQREMNDALSTLRILKRKQS
Ga0210384_102326323	3300021432	Soil	MAESEWRALYRAAILELDPKRLPGLVKAAEEAINERASPDARVPRDERREMDDALSTLRFLKRKQS
Ga0210384_103308731	3300021432	Soil	MVESQWRALYKAAILELDPKQLEARVKAAENAISARQASEARISREEGRAIDDALSVLRALKRKQS
Ga0210384_104992782	3300021432	Soil	MVESEWRALYRAAILELDPKQLQARVRAAEDAINARASSARVPPGERKEMDDASSTLRVLRRKQS
Ga0210391_103328292	3300021433	Soil	CSLQDSRMVESQWRELLKAAIVELDPERLQLRVKAAEEAINARASSDAPVSRDEQRAMNDALSTLRVLKKKQS
Ga0210391_112414071	3300021433	Soil	MADMQWRDLFKAAILELDPEQLQVRVRAAEDAINGRISSGIQVSRTERKAMEDALSTLRVLKRKPF
Ga0210390_100195722	3300021474	Soil	MVESQWRELFKAAIIELDPEQLQLRVQAAEDAINARASSDARVSRDEQRAMNDALSTLRVLKKKQS
Ga0210390_112777751	3300021474	Soil	LYKAAILELDPKQLEARVKAAENAISARQASEARISREERRAIDDALSVLRALKRKQS
Ga0210392_104188541	3300021475	Soil	MVEGQWRDLYRAAILELDPKQLQARVKAAEDAIHARATCEARVSRDERREMNDALS
Ga0210398_100885354	3300021477	Soil	DLYRAAILELDPKQLQARVKAAEDAINARASCGGRVSRDERREMNDALSTLRILKHKQS
Ga0210398_108105152	3300021477	Soil	MVESPWRDLYRAAILELDPKQLQARVKAAEDAINARASCGGRVSRDERREMNDALSTL
Ga0224572_10134692	3300024225	Rhizosphere	MVESQWRGLYRAAILELEPKRLQGRVKAAEDAIHLRASSGARVSRDEQREMNDALSTLRILKRKQC
Ga0228598_10004303	3300024227	Rhizosphere	MLEGQWRDLYRAAILELDPKRLQARVKAAEDAIHARATCEAPVSRDERREMNDALSTLRILKRKQS
Ga0224564_10642822	3300024271	Soil	MLEGQWRDLYRAAILELDPKQLQARVKAAEDAINARASCGGRVSRDERREMNDALSTLRILKHKQS
Ga0257154_10010222	3300026467	Soil	MVESQWRDLYRAAILELDPKRLQAQVKAAEDAIHVRTTCETRVSRDEQREMNDALSTLRILKRKQS
Ga0257154_10011052	3300026467	Soil	MVEGPWRDLYRAAILELDPNRLQARVKAAEDAIHARATCEARVSRDERREMNDALSTLRILKRKQS
Ga0257154_10240421	3300026467	Soil	MVESQWRDLYRAAILELDPKRLQARVKAAEDAIHARALSEARVSRDERREMNDALSTLRILNRKQS
Ga0257154_10586752	3300026467	Soil	YKAAILEINPNQIQVRANAAEEAIHARASSGSRIARDERQAMDDALCTLRILKQRSPNAS
Ga0257158_10608431	3300026515	Soil	MVESQWRTLYKAAILEINPNQIQVRANAAEEAIHARASSGSRIARDERQAMDDALCTLRILKQRSPNAS
Ga0208603_10008774	3300027109	Forest Soil	MAESEWRALYRAAILELDPKRLPALVKAAEDAINERASPDARVPRDERREMDDALSTLRFLKRKQS
Ga0209418_10827551	3300027371	Forest Soil	MVESQWRVLYRAAMIELDPEQLEARVKAAEDAINARASSDARVSRDERRAMDDALSDLRVLKRKQS
Ga0209330_10015987	3300027619	Forest Soil	MVESLWRELYKAAILELDPKQLQARVNAAEEAINARALRDARIPRDERKAMADALLTLRILKRREP
Ga0209446_10099463	3300027698	Bog Forest Soil	LAPRELKMVESNWRDLYRAAILELDPKRLQARVKAAEDAIQARASGEARVSRDERREMNDALSTLRILKRKQP
Ga0209248_100008743	3300027729	Bog Forest Soil	MVESQWRTLYRAAILELDPKRLQARVKAAEDAIHARGTSEARVSRDERREMNDALSTLRILKRK
Ga0209248_100325662	3300027729	Bog Forest Soil	MAESQWRALYRAAILELDPKRLQARVKAAEDTINARASSEVRISRDERREMNDALSTLRILKRKQS
Ga0209038_100002678	3300027737	Bog Forest Soil	MVESNWRDLYRAAILELDPKRLQARVKAAEDAIQARASGEARVSRDERREMNDALSTLRILKRKQP
Ga0209448_101489061	3300027783	Bog Forest Soil	MVESNWRDLYRAAILELDPKRLQARVKAAEDAIQARASGEARVSRDERREMNDALSTLRILK
Ga0209139_100297261	3300027795	Bog Forest Soil	MVESQWRALYRAAILELDPKRLQARVRAAEDAINARASGEARISRDERREMNDALSTLRILKRKQP
Ga0209274_100035083	3300027853	Soil	MVESQWRALYRAAILELDPKRLQARVKAAEDAINARASSEARISRDERTEMNDALSTLRILKRKQC
Ga0209167_100041365	3300027867	Surface Soil	LPLQELKLVENQWRELYRAAILELDPKRLQGRVKAAEDAIHARGSSAARISRDERREMNDALSTLRILKREQS
Ga0209275_100255004	3300027884	Soil	MAESEWRALYRAAILELDPKRLPALVKAAEDAINERASPDARVPRDERREMDDALSTLRFLKREQS
Ga0209380_102857312	3300027889	Soil	MIESEWRALYRAAILELDPKRLPALVKAAEDAIQERASSDARVPRDERREMDDALSTLRFLKREQS
Ga0265353_10042443	3300028015	Soil	MVGSQWRELYKAAILELDPKQLEVRVKAAEEAIHARISSGARVTREERRAMDDALSTLHVLKHK
Ga0265349_10134182	3300028037	Soil	MVESQWRGLYRAAILELDPKRLQGRVKAAEDAIHLRASSGARVSRDEQREMNNALSTLRILKRKQS
Ga0308309_100030663	3300028906	Soil	MVESQWRELFKAAILELDPKQLQLRVKAAEEAINARASSHARVSRDEQRAMDDALSALRVLKKKQS
Ga0308309_100056614	3300028906	Soil	MVESQWRDLYRAAILELDPKQLQARVKAAEDAINARALNEARVSRDERREMNDALSTLRMLKRKQS
Ga0308309_102095892	3300028906	Soil	MVESQWRALYKAAILELDPSQVQVRVKAAEDAIHARASSDSRIPRDERRAMDDALCTLRLLKRNQS
Ga0308309_106726491	3300028906	Soil	MVEHHWRDLYRAAIRELDPMRLQARVKAAEEAIHARASSGSQVSRDERREMDDALSTLRILKRKQS
Ga0265754_10338191	3300031040	Soil	HNTGDRWPLQESKMVGSQWRELYKAAILELDPKQLEVRVKAAEEAIHARISSGARVTREERRAMDDALSTLHVLKHK
Ga0310686_1009663092	3300031708	Soil	MVESQWRSLYRAAILELDPKRLQARVKAAEEAIHERASSGARVSRDERREMEDALSTMRILKAKQSE
Ga0310686_10180190020	3300031708	Soil	MVESQWRGLYRAAILELDPKRLPGRVKAAEDAINLRASSGARVSRDEQREMNDALSTLRILKRKQS
Ga0310686_1063098285	3300031708	Soil	AAILELDPEQLQLRVRAAEDAINARASSGSQVSRTERKAMEDALSTLRVLKRKLS
Ga0310686_1067903413	3300031708	Soil	LPRRELEMVESTWRDLYRAAILELDPKQLQARVKVAEDAINARASRGARVSRDERREMNDALSTLRILKRD
Ga0310686_1073578763	3300031708	Soil	MVESQWRSLYRAAILELDPKRLQARVEAAEEAIHARASSGARVSRDERREMEDALSTMRILKAKKSW
Ga0310686_1106076243	3300031708	Soil	MVDSQWRDLYKAAILELDPEKLEVRVSAAEDAINARLSSGSQLSRTERKAMEDALTTLRVLKRRLF
Ga0310686_1124450562	3300031708	Soil	MVESQWRSLYRAAILELDPKRLQARVKAAEEAIHARASSGARVSRDERREMEDALSTMRILK
Ga0310686_1127302521	3300031708	Soil	MVETQWRSLFKAVILELDPNQVQARVKAAEEAIYARDSRIPRDERRAMDDALCTLRVLKRKQS
Ga0310686_1135730182	3300031708	Soil	MVESQWRVLYRAAILELDLKLLSARVKAAEDAINARASSDARIPRDERREMDDALGILRILKRKQS
Ga0310686_1137987973	3300031708	Soil	MVESQWRDLYRAAILELDPKRLQARVQAAEDAINARASCEARVSREERREMNDALSTLRILKRKQS
Ga0307476_103119761	3300031715	Hardwood Forest Soil	MIESEWRALYRAAILELDPKRLPALVKAAEDAINERASSDARVPRDERREMDDALSTLRFLKRKQS
Ga0307478_100024354	3300031823	Hardwood Forest Soil	MVESQWRALFRAAILELDPKQLEVRVKAAEDAITARASAGARITREERRSMDDALSVLRALKRKQS
Ga0307478_107333582	3300031823	Hardwood Forest Soil	MVESEWRALYRAAILELDPKLLDARVKSAQEAINARMSSARVTPGERKEMDDALSTLLLLKRKQS
Ga0307472_1004566711	3300032205	Hardwood Forest Soil	MVESEWRDLYKAAMLELDPKQLQARVKAAEDAINARASGDARLSRDERRAMDDALSDLRV
Ga0370515_0047729_1669_1893	3300034163	Untreated Peat Soil	GGCSPLQESQMVESQWRTLYRAAILELDPKRLQARVKAAEDAIHARGTSEARVSRDERREMNDALSTLRILKRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073882

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences