Metagenome / Metatranscriptome Family F073885

Basic Information
Family ID	F073885
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	43 residues
Representative Sequence	MSLKSLVLCSDEKIVRVLRRVLGDLDIAVELCADSDTALRKL
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.75 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Most Common Taxonomy
Group	Bacteria (70.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (22.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.833 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.14% β-sheet: 11.43% Coil/Unstructured: 61.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13548	DUF4126	12.50
PF01541	GIY-YIG	0.83
PF05532	CsbD	0.83
PF06224	HTH_42	0.83
PF07676	PD40	0.83
PF13581	HATPase_c_2	0.83
PF12838	Fer4_7	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.83
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.83 %
Unclassified	root	N/A	29.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.83 %
Unclassified	root	N/A	29.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.83 %
Unclassified	root	N/A	29.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.67 %
Unclassified	root	N/A	29.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.17 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.17 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig154996	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
2140918007\|ConsensusfromContig172410	Not Available	861	Open in IMG/M
3300000567\|JGI12270J11330_10017446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4534	Open in IMG/M
3300000789\|JGI1027J11758_12788910	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300001471\|JGI12712J15308_10121170	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300001471\|JGI12712J15308_10168316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300001593\|JGI12635J15846_10356103	Not Available	896	Open in IMG/M
3300004080\|Ga0062385_10516566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300004082\|Ga0062384_100172144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1250	Open in IMG/M
3300004091\|Ga0062387_101479069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300004092\|Ga0062389_101380226	Not Available	889	Open in IMG/M
3300004092\|Ga0062389_101478456	Not Available	863	Open in IMG/M
3300004635\|Ga0062388_100264195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1410	Open in IMG/M
3300005435\|Ga0070714_100732847	Not Available	955	Open in IMG/M
3300005437\|Ga0070710_10195837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1273	Open in IMG/M
3300005445\|Ga0070708_101675111	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005455\|Ga0070663_100742319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300005575\|Ga0066702_10043121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2389	Open in IMG/M
3300005591\|Ga0070761_10862984	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005602\|Ga0070762_10572039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005610\|Ga0070763_10241995	Not Available	975	Open in IMG/M
3300006028\|Ga0070717_10289170	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300006028\|Ga0070717_10903749	Not Available	804	Open in IMG/M
3300006059\|Ga0075017_100166601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1578	Open in IMG/M
3300006059\|Ga0075017_101405819	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006086\|Ga0075019_10826799	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300006174\|Ga0075014_100280086	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006174\|Ga0075014_100379535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300006797\|Ga0066659_11810593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300006804\|Ga0079221_11591787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300009038\|Ga0099829_10547712	Not Available	961	Open in IMG/M
3300009090\|Ga0099827_10311875	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300009545\|Ga0105237_11598765	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300009616\|Ga0116111_1168627	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010341\|Ga0074045_10282576	Not Available	1091	Open in IMG/M
3300010361\|Ga0126378_12379699	Not Available	605	Open in IMG/M
3300010366\|Ga0126379_11454170	Not Available	791	Open in IMG/M
3300010376\|Ga0126381_103755727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300010379\|Ga0136449_100117557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5364	Open in IMG/M
3300011269\|Ga0137392_11534394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012356\|Ga0137371_11184894	Not Available	571	Open in IMG/M
3300012989\|Ga0164305_10793082	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300013296\|Ga0157374_10330813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1511	Open in IMG/M
3300013296\|Ga0157374_11468148	Not Available	705	Open in IMG/M
3300014489\|Ga0182018_10259516	Not Available	954	Open in IMG/M
3300017942\|Ga0187808_10571668	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300017946\|Ga0187879_10529079	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300017970\|Ga0187783_10351934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1072	Open in IMG/M
3300017970\|Ga0187783_10804158	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300017970\|Ga0187783_10989185	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300017970\|Ga0187783_11111068	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300017972\|Ga0187781_11063310	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300017972\|Ga0187781_11261218	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300017973\|Ga0187780_10336699	Not Available	1064	Open in IMG/M
3300017975\|Ga0187782_10912337	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300017975\|Ga0187782_11108103	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300017975\|Ga0187782_11168419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300017999\|Ga0187767_10075740	Not Available	889	Open in IMG/M
3300018035\|Ga0187875_10440114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300018047\|Ga0187859_10251566	Not Available	949	Open in IMG/M
3300018057\|Ga0187858_10443908	Not Available	800	Open in IMG/M
3300018057\|Ga0187858_10626492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300018090\|Ga0187770_11718847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300019887\|Ga0193729_1238831	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300020004\|Ga0193755_1164728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300020580\|Ga0210403_10572227	Not Available	914	Open in IMG/M
3300021181\|Ga0210388_10464244	Not Available	1112	Open in IMG/M
3300021401\|Ga0210393_11575579	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021402\|Ga0210385_10941858	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300021478\|Ga0210402_10528204	Not Available	1095	Open in IMG/M
3300021479\|Ga0210410_10147134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2099	Open in IMG/M
3300022521\|Ga0224541_1011090	Not Available	972	Open in IMG/M
3300024227\|Ga0228598_1083755	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300025414\|Ga0208935_1013575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1101	Open in IMG/M
3300025612\|Ga0208691_1093679	Not Available	677	Open in IMG/M
3300025906\|Ga0207699_11415932	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300025910\|Ga0207684_10470660	Not Available	1078	Open in IMG/M
3300025915\|Ga0207693_10129940	All Organisms → cellular organisms → Bacteria → Acidobacteria	1980	Open in IMG/M
3300025916\|Ga0207663_10297073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1205	Open in IMG/M
3300025928\|Ga0207700_11481211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300025929\|Ga0207664_11345224	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026035\|Ga0207703_10050237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3374	Open in IMG/M
3300026078\|Ga0207702_10047713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3610	Open in IMG/M
3300026325\|Ga0209152_10182847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300026489\|Ga0257160_1082305	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300026527\|Ga0209059_1125464	Not Available	974	Open in IMG/M
3300026550\|Ga0209474_10721371	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300027039\|Ga0207855_1044000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300027625\|Ga0208044_1107031	Not Available	809	Open in IMG/M
3300027652\|Ga0209007_1018192	All Organisms → cellular organisms → Bacteria → Acidobacteria	1821	Open in IMG/M
3300027652\|Ga0209007_1186461	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300027698\|Ga0209446_1090205	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300027725\|Ga0209178_1409492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027783\|Ga0209448_10070284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1177	Open in IMG/M
3300027842\|Ga0209580_10256408	Not Available	870	Open in IMG/M
3300027842\|Ga0209580_10485331	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300027875\|Ga0209283_10930677	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027879\|Ga0209169_10043733	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300027884\|Ga0209275_10762765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027889\|Ga0209380_10877198	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300027895\|Ga0209624_10117694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1743	Open in IMG/M
3300027911\|Ga0209698_11319002	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300028020\|Ga0265351_1004327	Not Available	1097	Open in IMG/M
3300028800\|Ga0265338_11167277	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300028906\|Ga0308309_10814673	Not Available	811	Open in IMG/M
3300029907\|Ga0311329_10277067	Not Available	1232	Open in IMG/M
3300030659\|Ga0316363_10273166	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031090\|Ga0265760_10163982	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031122\|Ga0170822_10178443	Not Available	923	Open in IMG/M
3300031231\|Ga0170824_127994262	All Organisms → cellular organisms → Bacteria → Acidobacteria	1959	Open in IMG/M
3300031233\|Ga0302307_10224217	Not Available	967	Open in IMG/M
3300031754\|Ga0307475_11248880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300031996\|Ga0308176_12125302	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031996\|Ga0308176_12241770	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300032180\|Ga0307471_102455253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300032895\|Ga0335074_10761645	Not Available	914	Open in IMG/M
3300032898\|Ga0335072_10040931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6334	Open in IMG/M
3300032955\|Ga0335076_10706836	Not Available	889	Open in IMG/M
3300033289\|Ga0310914_11836051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.33%
Host-Associated	Host-Associated	6.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.17%
Aquatic	Environmental → Aquatic	19.17%
Plants	Host-Associated → Plants	6.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.67%
Freshwater	Environmental → Aquatic → Freshwater	14.17%
Sediment	Environmental → Aquatic → Sediment	5.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Peat	Environmental → Terrestrial → Peat	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.67%
Loam	Environmental → Terrestrial → Soil → Loam	20.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_03517590	2140918007	Soil	MSLKSLVLCSDEKIVRVLRRVLGDLDIDVELCADSDSVLRKLTRQRCEAMIVDFA
A_all_C_01226000	2140918007	Soil	MRLQALLLTPDEKIERVLRRVLGDLEISVEYCADTDSA
JGI12270J11330_100174467	3300000567	Peatlands Soil	MNLRSLVLCSDEKIVRVLRRVLGDLDIAVELCSDADSAL
JGI1027J11758_127889101	3300000789	Soil	MGLKSLLLCSDEKIVRVLRRVLGDLEIEVDLCPNSDAALRKLTRHRFEGIIADLADDGAIEVL
JGI12712J15308_101211701	3300001471	Forest Soil	MSLKALVLCSDEKVVRVLRRTLGDLDIAMEMCADSDAALRRLTRQRYEGII
JGI12712J15308_101683161	3300001471	Forest Soil	MGLKSLLLCSDEKIVRVLRRVLGDLDIAVELCLDADSALRKLTRQ
JGI12635J15846_103561031	3300001593	Forest Soil	MSLKALLLCSDAKIVRVLRRVLGDLEIAVELCADGDSALRKLTRERF
Ga0062385_105165661	3300004080	Bog Forest Soil	MSLKSLVLCADEKIVRVLRRVLGDLDIAVELCGDSDAALRKLTRQR
Ga0062384_1001721441	3300004082	Bog Forest Soil	MILKSLVLCSDEKIVRVLRRTLGDLEIGVELCADADSALRKL
Ga0062387_1014790691	3300004091	Bog Forest Soil	MSLKSLVLCSDEKIVRVLRRVLGDLDIAVELCADSDTALRKL
Ga0062389_1013802261	3300004092	Bog Forest Soil	MTLKSLLLCADEKIVRVLRRTLGDLDISVEHCTSAEAALRHLTRD
Ga0062389_1014784562	3300004092	Bog Forest Soil	MSLKSLVLCADEKIVRVLRRVLGDLDIGVELCVDSDSALR
Ga0062388_1002641951	3300004635	Bog Forest Soil	MILKSLVLCSDEKIVRVLRRTLGDLEIGVELCADADSALRKLTRERFEA
Ga0070714_1007328472	3300005435	Agricultural Soil	MGLKSLLLCSDEKIVRVLRRVMGDLEIEVELCPNSETALRKLTRQR
Ga0070710_101958373	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MALKSLLLCSDEKIVRVVRRVLGDLEIEVELCLTADSALRKLTRQR
Ga0070708_1016751111	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSLKALLLCSDEKIVRVLRRTLGDLEIGVELCSDGDAALRKLTR
Ga0070663_1007423193	3300005455	Corn Rhizosphere	MKSAMNLQALVLCSDEKIVRVLRRVLNDLEIAVELCSDAELAIQKLSRRRFE
Ga0066702_100431211	3300005575	Soil	MGLKALLLCSDEKIVRVLRRVLGDLDIELQVCADADS
Ga0070761_108629842	3300005591	Soil	MKLKSLLLCSDEKIVRVLRRTLGDLDIGVEHSASSEIALRHL
Ga0070762_105720391	3300005602	Soil	MSLKSLVLCSDEKIIRVLRRVLGDLDISVDLCVNSDAALRKLTRER
Ga0070763_102419951	3300005610	Soil	MGLKSLLLCSDEKIVRVLRRVLGDLDIEVDLCLNSDTAL
Ga0070717_102891703	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGLKSLLLCSDEKIVRVLRRVLGDLDIEVDLCLNSDTALRKLTRERFEGIIADMSDD
Ga0070717_109037491	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKSLLLCSDEKIVRVLRRTLGDLDIGVELCSTA
Ga0075017_1001666013	3300006059	Watersheds	MSLKSLLLCSDEKIVRVLRRVLGDLEIDVELCPTADSA
Ga0075017_1014058191	3300006059	Watersheds	MNLKALLLCSDEKIVRVLRRTLGDLDVSVEHCTGSEAALRYLTRERFE
Ga0075019_108267991	3300006086	Watersheds	VRLPEDGLLMSLKSLLLCSDEKIVRVLRRVLGDLDIAVDLCSDADAALRK
Ga0075014_1002800861	3300006174	Watersheds	MSLKSLVLCSDEKIVRVLRRVLGDLEIAVELCSDSDAALRKLT
Ga0075014_1003795351	3300006174	Watersheds	MSLKSLVLSSDEKIVRVLRRVLNDLEIAVEHCNHPD
Ga0066659_118105931	3300006797	Soil	MNLQALLLCSDDKIVRVLRRVLNDLEIAVEHCADSEIA
Ga0079221_115917872	3300006804	Agricultural Soil	MKSAMNLQALVLCSDEKIVRVLRRVLNDLEIAVELCSDAELA
Ga0099829_105477122	3300009038	Vadose Zone Soil	VDLKSLLLCSDEKIVRVLRRTLGDLEIGVEHCTSSEVALRHLTRERFE
Ga0099827_103118753	3300009090	Vadose Zone Soil	VDLKSLLLCSDEKIVRVLRRTLGDLEIGVEHCTSSEVALR
Ga0105237_115987651	3300009545	Corn Rhizosphere	MSLKSLVYCSDEKIVRVLRRVLCDLEITVEHCADSDSAIHKLTRQRF
Ga0116111_11686271	3300009616	Peatland	MNLKALLLCSDDKIVRVLRRTLGDLDIEVEHCTNSEAAL
Ga0074045_102825761	3300010341	Bog Forest Soil	MSLKALVLCSDDKIVRVLRRTLGDLDIVMEMCADADTA
Ga0126378_123796992	3300010361	Tropical Forest Soil	MSLKSLVLCSDENIVRVLRRVLCELEIAMEHCSEPE
Ga0126379_114541701	3300010366	Tropical Forest Soil	MTPGRLLSMALKSLLLCSDEKIVRVVRRVLGDLEIEVELCLNADSAL
Ga0126381_1037557272	3300010376	Tropical Forest Soil	MGLKCLLLCSDEKIVRVLRRVLGDLEIEVDLCANSDAALRKLT
Ga0136449_1001175571	3300010379	Peatlands Soil	MNLKALLLCSDDKIVRVLRRTLGDLDIEVEHCTNS
Ga0137392_115343942	3300011269	Vadose Zone Soil	MSLKSLLLCSDEKIVRVLRRTLGDLEIDVELCASSE
Ga0137388_111911091	3300012189	Vadose Zone Soil	MSLQSLVLCSDEKIVRVLRPVLDALAIRLEHCTAADSAIPQLTRQ
Ga0137371_111848941	3300012356	Vadose Zone Soil	MSLKALVLCSDEKIVRVLRRTLGDLEIGVELCTNADSALRKLTRD
Ga0164305_107930822	3300012989	Soil	MGLKSLLLCSDEKIVRVLRRVLGDLDIELHVCADADSALYRLTRRRFEGIIVDCA
Ga0157374_103308131	3300013296	Miscanthus Rhizosphere	MRLQALLLTPDEKIERVLRRVLGDLEISVEDCADTDSAVNELTRDRVEDVI
Ga0157374_114681482	3300013296	Miscanthus Rhizosphere	MGLKALLLCSDEKIVRVLRRVLGDLDIELQVCADADSALYR
Ga0182018_102595161	3300014489	Palsa	MDLKSLLLCSDEKIVRVLRRTLSELDISVEHCPSSEVALSHLTRGR
Ga0187808_105716681	3300017942	Freshwater Sediment	MDLKALVLCSDEKIVRVLRRTLGDLEIGVEVCTDNES
Ga0187879_105290791	3300017946	Peatland	MTLKSLLLCSDDKIVRVLRRTLGDLDIGVEHCANAEAALRHLTRN
Ga0187783_103519341	3300017970	Tropical Peatland	MSLNALVLCSDDKIVRVLRRTLGDLEIGVELCTDADAALRQLTRRRF
Ga0187783_108041581	3300017970	Tropical Peatland	MSLKSLVLCSDEKIVRVLRRVLGDLEIAVELCTDSDSAL
Ga0187783_109891851	3300017970	Tropical Peatland	MELKALVLCSDDKIVRVLRRTLGDLEIGVELCTDPEGALRKL
Ga0187783_111110682	3300017970	Tropical Peatland	MSLKALLLCSDEKIVRVLRRTLSDLDIAVELCGEADAALRKLTRQRYE
Ga0187781_110633101	3300017972	Tropical Peatland	MSLKALVLCSDEKIVRVLRRTLGDLDIALEVCENSGTALRKLSRQ
Ga0187781_112612181	3300017972	Tropical Peatland	MAQVMSLNALLLTSDEKIARLLRRTLGDLDIGVEICADSDSALRK
Ga0187780_103366992	3300017973	Tropical Peatland	MEMAPAMSLNALVLCSDDKIIRVLRRTLGDLEIGVELCSDADGALRKLTRRRYEA
Ga0187782_109123371	3300017975	Tropical Peatland	MSLNALVLCSDEKIVRVLRRTLGDLEISVEICADPDSALRKLTRRRFEAIVVDCAGEGSS
Ga0187782_111081031	3300017975	Tropical Peatland	MSLKALVLCSDEKIVRVLRRTLGDLDIAIDMCANSDAAL
Ga0187782_111684191	3300017975	Tropical Peatland	MTLKSLVLCSDEKIVRVLRRVLGDLEIDIELCSTTDSALRRLTRQ
Ga0187767_100757403	3300017999	Tropical Peatland	MSLQSLVLCSDEKIVRVLRRVLNELEIAAEYCAEAEAAVHKLT
Ga0187875_104401141	3300018035	Peatland	MSLKALLLCADEKIVRVLRRVLGDLDIAVELCADS
Ga0187859_102515662	3300018047	Peatland	MSLKSLVLCADEKIVRVLRRVLGDLDIAVELCVDSDGALRRLTRQRF
Ga0187858_104439081	3300018057	Peatland	MRLKSLLLCSDDKIVRVLRRTLGDLNIEVEHCTNAEVALSHLTRDRF
Ga0187858_106264921	3300018057	Peatland	MSLKSLVLCADEKIVRVLRRVLGDLDIAVELCVDSDGALRRLTRQ
Ga0187770_117188471	3300018090	Tropical Peatland	MTLKALVLCSDDKIVRVLRRVLGDLEIAIELCPNSDAALRKLTRERFEAIVVDCVEDGSSEV
Ga0193729_12388311	3300019887	Soil	VDLKSLLLCSDEKIVRVLRRTLGDLEIGVEHCTNSEVALRHLTRER
Ga0193755_11647282	3300020004	Soil	MGLMSLVLCDDEKIVRVLRRVLNDLEIGIEHCTDPDGAVHKLTRQRF
Ga0210403_105722271	3300020580	Soil	MSLKSLVLCADEKIVRVLRRVLGDLDIGVELCADAD
Ga0210388_104642441	3300021181	Soil	MSLKSLVLCADEKIVRVLRRVLGDLEIGVELCTDSD
Ga0210393_115755791	3300021401	Soil	MSLKSMVLCSDEKIVRVLRRTLGDLDIAVDLCSDSDEALRKL
Ga0210385_109418581	3300021402	Soil	MSLKSLVLCADEKIVRVLRRVMGDLDIAVELCVDADS
Ga0210402_105282041	3300021478	Soil	MSLKSLVLCADEKIVRVLRRVLGDLDIAVELCGDSDAALRKLTRER
Ga0210410_101471344	3300021479	Soil	MNLKCLLLCSDDKIVRVLRRTLGDLDISVEHCTSSEIA
Ga0224541_10110901	3300022521	Soil	MKLKSLLLCSDDKIVRVLRRTLGDLDISVEPCASAEVALRHLTRERFEA
Ga0228598_10837551	3300024227	Rhizosphere	VRAMTLKSLLLCSDDKIVRVLRRTLGDLEIGVELCADADS
Ga0208935_10135753	3300025414	Peatland	MTLKSLLLCSDDKIVRVLRRTLGDLDIGVEHCTSSETALRHLTRERFEA
Ga0208691_10936791	3300025612	Peatland	MKLRALLLCSDEKIVRVVRRTLGDLDIAIEHCPAA
Ga0207699_114159321	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGLKALLLCSDDKIVRVLRRVLGDLDIELQVCADADSALYR
Ga0207684_104706603	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSLKSLLLCSDEKIVRVLRRTLSDLEIEVELCADSESALRKLTRERFE
Ga0207693_101299401	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGLKSLLLCSDEKIVRVLRRVLGDLDIEVDLCLNSDTALRKLTR
Ga0207663_102970731	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGLKSLLLCSDEKIVRVLRRVMGDLEIEVELCPNSETALRKLT
Ga0207700_114812111	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGLKSLLLCSDEKIVRVLRRVLGDLDIEVDLCLNSDTALRKLTRERFEGIIADMSD
Ga0207664_113452241	3300025929	Agricultural Soil	MGLKALLLCSDDKIVRVLRRVLGDLDIELQVCADADSAL
Ga0207703_100502371	3300026035	Switchgrass Rhizosphere	MRLQALLLTPDEKIERVLRRVLGDLEISVEYCADTDSALNKL
Ga0207702_100477135	3300026078	Corn Rhizosphere	MGLKSLLLCSDEKIVRVLRRVLGDLDIEIELCADADSALY
Ga0209152_101828473	3300026325	Soil	MKSAMNLQALVLCSDEKIVRVLRRVLNDLEIAVEL
Ga0257160_10823051	3300026489	Soil	MNLKSLLLCADEKIVRVLRRTLGDLEIAVELCASAELA
Ga0209059_11254642	3300026527	Soil	MGLKALLLCSDEKIVRVLRRVLGDLDIELQVCADADSALYRL
Ga0209474_107213711	3300026550	Soil	MSLQALLFCSDDKIVRVLRRVLGDLEVDVEHCTELDSA
Ga0207855_10440001	3300027039	Tropical Forest Soil	MGLKSLLLCSDEKIVRVLRRVLGDLDIEVDLCPNADAALRKLTRERFE
Ga0208044_11070312	3300027625	Peatlands Soil	MTLKSLLLCSDEKIVRVLRRTLGDLDIGVELCANSDA
Ga0209007_10181924	3300027652	Forest Soil	MSLKSLVLCSDDKVVRVLRRVLGDLDIEVDLCATSDAALRKL
Ga0209007_11864611	3300027652	Forest Soil	MKLSSLLLCSDDKIVRVLRRTLADLDINVEYCVDVDAALRHLTRSRFE
Ga0209446_10902052	3300027698	Bog Forest Soil	MSLKALVLCSDDKIVRVLRRTLGDLDIVMEMCADA
Ga0209178_14094922	3300027725	Agricultural Soil	MKSAMNLQALVLCSDEKIVRVLRRVLNDLEIAVELCSD
Ga0209448_100702841	3300027783	Bog Forest Soil	MSLKSLLLCSDEKIVRVLRRVLGDLDISVDLCSDADAALRKLTRQRF
Ga0209580_102564081	3300027842	Surface Soil	MGLKSLLLCADEKIVRVLRRVLGDLEIDVELCASSDAALRKLTRQ
Ga0209580_104853311	3300027842	Surface Soil	MSLKALLLCSDAKIVRVLRRVLGDLDIAVELCADADSALR
Ga0209283_109306771	3300027875	Vadose Zone Soil	MNLKSLLLCADEKIVRVLRRTLGDLDIGVELCASPEMA
Ga0209169_100437334	3300027879	Soil	MTLKSLLLCSDEKIVRVLRRTLGDLEIGVELCADADTALR
Ga0209275_107627651	3300027884	Soil	MGLKSLLLCSDEKIVRVLRRVLGDLEIEVELCPNSE
Ga0209380_108771981	3300027889	Soil	MSLKSLVLCADEKIVRVLRRVLGDLEIGVELCSDADSALRKLTRERYEAI
Ga0209624_101176941	3300027895	Forest Soil	MEMGFTMSLKALLLCSDAKIVRVLRRVLGDLEIDVELCADGDSALRK
Ga0209698_113190021	3300027911	Watersheds	MNLHALVLCSDEKIVRVLRRALVDLDIGIEVCGDPDSALRKLTRS
Ga0265351_10043272	3300028020	Soil	VDLKCLLLCSDDKIVRVLRRTLGDLEISVEHCTSSEVALRHLTR
Ga0265338_111672771	3300028800	Rhizosphere	MSLKALVLCSDEKIVRVLRRVLGDLDIAVDLCSDSDAALRKLTRERFEAIVAD
Ga0308309_108146732	3300028906	Soil	MNLKSLLLCSDDKIVRVLRRTLGDLDIGVELCASSEIALR
Ga0311329_102770672	3300029907	Bog	MTLKSLLLCADEKIVRVLRRTLGDLDIGVELCASSDVALRKLT
Ga0316363_102731661	3300030659	Peatlands Soil	MTLKSLLLCSDEKIVRVLRRTLGDLDIGVELCANSDAALRKLT
Ga0265760_101639821	3300031090	Soil	MTLKSLLLCSDDKIVRVLRRTLGDLEIGVELCADADSALRK
Ga0170822_101784432	3300031122	Forest Soil	MGLKSLLLCSDEKIVRVLRRVLGDLEIEVDLCLNS
Ga0170824_1279942624	3300031231	Forest Soil	MSLKSLVLCSDEKIVRVLRRVLGDLDIAVELCADSD
Ga0302307_102242171	3300031233	Palsa	MTLKSLVLCSDDKIVRVLRRTLGDLEIGVELCADADSALRK
Ga0307475_112488801	3300031754	Hardwood Forest Soil	MSLKSLVLCSDQKIVRVLRRVLGDLDIAVELCADSD
Ga0308176_121253021	3300031996	Soil	MGLKSLLLCSDEKIVRVLRRVLGDLDIELQVCADADSALYRLTRR
Ga0308176_122417702	3300031996	Soil	MGLKALLLCSDDKIVRVLRRVLGDLDIELQVCADADSA
Ga0307471_1024552532	3300032180	Hardwood Forest Soil	MRNGLPMGLKSLLLCSDEKIVRVLRRVLGDLDIEVDLCLNSDTALRKL
Ga0335074_107616451	3300032895	Soil	MSLKSLLLCSDEKIVRVLRRVLGDLEIGIELCPNSDAVLRKLTRQ
Ga0335072_100409318	3300032898	Soil	MSLNSLVLCSDDKIVRVLRRSLGDLDIAVELCSDSA
Ga0335076_107068362	3300032955	Soil	MALKSLILCSDDKIVRVLRRVLGDLDIEIDLCPNSDAALRRLT
Ga0310914_118360511	3300033289	Soil	MALKSLLLCSDEKIVRVLRRVLGDLDIEVELCPTA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073885

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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