Metagenome Family F073903

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073903
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	109 residues
Representative Sequence	LFLQVLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA
Number of Associated Samples	113
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.50 %
% of genes near scaffold ends (potentially truncated)	96.67 %
% of genes from short scaffolds (< 2000 bps)	96.67 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.167 % of family members)
Environment Ontology (ENVO)	Unclassified (28.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.88% β-sheet: 0.00% Coil/Unstructured: 28.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01293	PEPCK_ATP	6.67
PF04525	LOR	5.00
PF04229	GrpB	3.33
PF00535	Glycos_transf_2	2.50
PF00211	Guanylate_cyc	2.50
PF01887	SAM_HAT_N	2.50
PF03861	ANTAR	2.50
PF05534	HicB	2.50
PF04542	Sigma70_r2	1.67
PF01799	Fer2_2	1.67
PF01139	RtcB	1.67
PF14907	NTP_transf_5	0.83
PF00682	HMGL-like	0.83
PF13087	AAA_12	0.83
PF01556	DnaJ_C	0.83
PF09722	Xre_MbcA_ParS_C	0.83
PF00389	2-Hacid_dh	0.83
PF00111	Fer2	0.83
PF04389	Peptidase_M28	0.83
PF00890	FAD_binding_2	0.83
PF02673	BacA	0.83
PF13649	Methyltransf_25	0.83
PF01699	Na_Ca_ex	0.83
PF08241	Methyltransf_11	0.83
PF09970	DUF2204	0.83
PF04237	YjbR	0.83
PF01230	HIT	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1866	Phosphoenolpyruvate carboxykinase, ATP-dependent	Energy production and conversion [C]	6.67
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	5.00
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	3.33
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	2.50
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	2.50
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.50
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	2.50
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	2.50
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.67
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	1.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.67
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.83
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.83
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.83
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.00 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.83 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.17 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.83 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	0.83 %
Erysipelotrichia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.83 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.83 %
Erysipelotrichales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → Erysipelotrichales	0.83 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.83 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.83 %
Desulfarculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.83 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	0.83 %
Aminicenantes bacterium SCGC AAA255-A06	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Aminicenantes bacterium SCGC AAA255-A06	0.83 %
Turicibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → Erysipelotrichales → Turicibacteraceae	0.83 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.83 %
Desulfarculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.83 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.83 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	0.83 %
Turicibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → Erysipelotrichales → Turicibacteraceae → Turicibacter	0.83 %
Desulfarculus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Desulfarculus	0.83 %
Aminicenantes bacterium SCGC AAA255-A06	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Aminicenantes bacterium SCGC AAA255-A06	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.83 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.83 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.83 %
Turicibacter sanguinis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → Erysipelotrichales → Turicibacteraceae → Turicibacter → Turicibacter sanguinis	0.83 %
Desulfarculus baarsii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Desulfarculus → Desulfarculus baarsii	0.83 %
Aminicenantes bacterium SCGC AAA255-A06	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Aminicenantes bacterium SCGC AAA255-A06	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11646582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300000956\|JGI10216J12902_124263236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300004114\|Ga0062593_102145728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300004153\|Ga0063455_101438771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300004156\|Ga0062589_100962244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300004643\|Ga0062591_101731036	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005172\|Ga0066683_10881017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → Erysipelotrichales → Turicibacteraceae → Turicibacter → Turicibacter sanguinis	514	Open in IMG/M
3300005186\|Ga0066676_10619954	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005294\|Ga0065705_10634414	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005327\|Ga0070658_11134369	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005332\|Ga0066388_102925749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300005343\|Ga0070687_101174044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfarculales → Desulfarculaceae → Desulfarculus → Desulfarculus baarsii	565	Open in IMG/M
3300005356\|Ga0070674_101659401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300005365\|Ga0070688_101499076	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005435\|Ga0070714_100524791	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005435\|Ga0070714_101448385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300005436\|Ga0070713_102394564	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Aminicenantes bacterium SCGC AAA255-A06	510	Open in IMG/M
3300005440\|Ga0070705_101298344	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005444\|Ga0070694_101726696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300005445\|Ga0070708_101117737	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005468\|Ga0070707_100373419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300005526\|Ga0073909_10351935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300005535\|Ga0070684_101646147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300005544\|Ga0070686_100106292	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300005549\|Ga0070704_100571810	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005549\|Ga0070704_102134001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300005559\|Ga0066700_10682425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300005559\|Ga0066700_10825762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300005615\|Ga0070702_100355043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1034	Open in IMG/M
3300005713\|Ga0066905_100311953	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005764\|Ga0066903_106987160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300006028\|Ga0070717_10260899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1533	Open in IMG/M
3300006034\|Ga0066656_10647599	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006046\|Ga0066652_101101262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300006173\|Ga0070716_101252045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300006797\|Ga0066659_10674453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300006800\|Ga0066660_10448461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1077	Open in IMG/M
3300006853\|Ga0075420_101538297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300006904\|Ga0075424_101121123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300009038\|Ga0099829_10226140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300009088\|Ga0099830_11691180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300009098\|Ga0105245_11098978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300009137\|Ga0066709_100839650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1334	Open in IMG/M
3300009137\|Ga0066709_103048308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300009147\|Ga0114129_12193155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300009156\|Ga0111538_11006677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300009177\|Ga0105248_11894368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300010040\|Ga0126308_10386948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300010040\|Ga0126308_11144076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010042\|Ga0126314_11254652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300010044\|Ga0126310_10594779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	824	Open in IMG/M
3300010045\|Ga0126311_10985462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300010047\|Ga0126382_11485227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300010166\|Ga0126306_10639683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300010301\|Ga0134070_10432848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300010304\|Ga0134088_10537468	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	578	Open in IMG/M
3300010358\|Ga0126370_12376789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300010375\|Ga0105239_11174125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300010403\|Ga0134123_12489750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	583	Open in IMG/M
3300012201\|Ga0137365_10038050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3673	Open in IMG/M
3300012202\|Ga0137363_11225573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300012203\|Ga0137399_10343453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1239	Open in IMG/M
3300012206\|Ga0137380_10841963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300012209\|Ga0137379_10194730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1940	Open in IMG/M
3300012361\|Ga0137360_11448259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300012363\|Ga0137390_10443985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300012469\|Ga0150984_104143064	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012685\|Ga0137397_10656123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300012897\|Ga0157285_10338152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300012922\|Ga0137394_10886142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300012924\|Ga0137413_11428445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300012929\|Ga0137404_11344908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300012958\|Ga0164299_10283352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300012961\|Ga0164302_10308848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300012977\|Ga0134087_10125207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1098	Open in IMG/M
3300012984\|Ga0164309_10703532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300012985\|Ga0164308_10327116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1228	Open in IMG/M
3300012988\|Ga0164306_10309362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300013104\|Ga0157370_11376089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300013105\|Ga0157369_12688196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300013308\|Ga0157375_10181889	Not Available	2254	Open in IMG/M
3300014157\|Ga0134078_10427353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300014326\|Ga0157380_13267465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300014488\|Ga0182001_10151372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300015242\|Ga0137412_11086539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300015264\|Ga0137403_11356498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300015371\|Ga0132258_13228729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300015372\|Ga0132256_101729863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300015373\|Ga0132257_101095058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300015374\|Ga0132255_103895925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300018028\|Ga0184608_10399352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300018468\|Ga0066662_11440910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300019361\|Ga0173482_10208736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300019875\|Ga0193701_1073808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300024222\|Ga0247691_1040466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300024224\|Ga0247673_1025827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300024288\|Ga0179589_10528389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300025911\|Ga0207654_10019931	All Organisms → cellular organisms → Bacteria	3547	Open in IMG/M
3300025911\|Ga0207654_11259305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300025929\|Ga0207664_11009499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300025929\|Ga0207664_11700872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300025933\|Ga0207706_11008579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300025937\|Ga0207669_11679975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300026528\|Ga0209378_1192610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300026532\|Ga0209160_1196881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300027821\|Ga0209811_10013903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2592	Open in IMG/M
3300027846\|Ga0209180_10412654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300028072\|Ga0247675_1045013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300028138\|Ga0247684_1081063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300028711\|Ga0307293_10302780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028720\|Ga0307317_10279439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300028722\|Ga0307319_10145029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300028755\|Ga0307316_10252481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300028768\|Ga0307280_10292733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300028771\|Ga0307320_10190262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300028876\|Ga0307286_10112688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300028885\|Ga0307304_10216537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	824	Open in IMG/M
3300030336\|Ga0247826_10774666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300031740\|Ga0307468_100828265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300031939\|Ga0308174_11940228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.67%
Host-Associated	Host-Associated	18.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.83%
Plants	Host-Associated → Plants	18.33%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	18.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_116465822	3300000953	Soil	YAWRNRRLLFCQILFWDLTAPFLSLGLRLGLIFAIVHDPRIFPTAVLPGWIALMLIRYILVPIRARGKLTGLFLYMFFYEACLYWLNLWALLTVKNKSWVTRSVTAQA*
JGI10216J12902_1242632361	3300000956	Soil	RWKRGYIRESIYTLTYAWRVKPLLFVQILCWDLTAPFLSFGLRIALIVTAFTHPSLIVTTIVPSWIVLMLVRYIFVPLRAGRKLPGLILYMFFYELCLYWLNLWALFTVKNKSWVTRASSAQA*
Ga0062593_1021457282	3300004114	Soil	WRVKKLLWLQILVWDLTAPFLAFGLRIGLIVIVIANPMLFLTAILPGWLVLLLIRYSFVPLRARDKLFGLFLYMFFYEGCLYWLNLWALFTVRNKSWVTRTSSAQA*
Ga0063455_1014387711	3300004153	Soil	QILCWDLTAPFLSFGLRLALLATAIGNPRLLVTTILPSWIVLMLVRYCFVPLRARDKLAGLFLYMLFYEGCLYWLNLWALFTVKNKSWVTRTVSAQA*
Ga0062589_1009622442	3300004156	Soil	AWRCKKLLWLQILLWDLTAPFLSFGLRIGLVVTVVARPELFLRVILPSWVLLLLVRYILVPLRARDKLLGLFVYMLFYECCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0062591_1017310362	3300004643	Soil	QQRRWKRGYIRESIYTLSYAWRVKKLLWLQILVWDLTAPFLAFGLRIGLIVIVIANPMLFLTAILPGWLVLLLIRYSFVPLRARDKLFGLFLYMFFYEGCLYWLNLWALFTVRNKSWVTRTSSAQA*
Ga0066683_108810171	3300005172	Soil	YAWRVKKLLWLQVLFWDLTAPFLSFGLRVALLFTIVAEPRLVVVVILPSWVVLMLVRYVFVPMRAPDKLFGLFLYMFFYEVCLYWVNIWALFTVRNKSWVTRAEVAQA*
Ga0066676_106199541	3300005186	Soil	GLRIGLIVVVVTNPTLFFTAILPSWVALLLIRYIFVPLRAPDKLLGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRTPAPQPV*
Ga0065705_106344142	3300005294	Switchgrass Rhizosphere	QRRWKRGYIRESIYTLTYAWRVKPLLFLQILCWDLTAPFLSFGLRIALIVTAVTNPSLIVTTIVPSWIVLMLVRYVFVPLRAGRKLPGLLVYMFFYELCLYWLNLWALLTVRNKSWVTRSATAQI*
Ga0070658_111343691	3300005327	Corn Rhizosphere	WRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVAARPEVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0066388_1029257491	3300005332	Tropical Forest Soil	WDLSAPFLSFGLRIGLLIIVVTNPAVFVTAILPSWIMLLLIRYIFVPLRARDKVPGLFLYMLFYELCLYWLNLYALFTVRNKSWVTRAPAPQPA*
Ga0070687_1011740441	3300005343	Switchgrass Rhizosphere	LSYAWRTKRLLFLQVLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0070674_1016594011	3300005356	Miscanthus Rhizosphere	KKLLWLQILFWDLSAPFLAFGLRVGLVVLVLTNPMLFFTAILPGWIVLLLIRYIFVPLRAPEKLPGLFLYMFFYELCLYWLNLWALFTVRNKSWVTRTQTAQA*
Ga0070688_1014990761	3300005365	Switchgrass Rhizosphere	FLAFGLRIGLIVVVLTNPTLFFTAILPSWVALLLIRYIFVPLRAPDKLPGLFLYMFFYEGCLYWLNLWALFTVRNKSWVTRAPEPQPA*
Ga0070714_1005247913	3300005435	Agricultural Soil	FGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0070714_1014483852	3300005435	Agricultural Soil	WDLTAPFLSFGLRIGLVVIVVTNPIVFFTAILPSWIMLLLIRYIFVPLRARDKLPGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRGASAQS*
Ga0070713_1023945641	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FLQVLFWDLSAPFLSFGLRVALLVTMIRFPVLVFTTILPSWIVLMLIRYIFVPLRAREKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0070705_1012983442	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	WKVKPLLWLQILFWDLSAPFLSLGLRLGIVAMAFQQPRLLLTVVLPSWIALLVVRYVFVPLRATRKLPGLLLYMFFYEFCLYWLNLWALFTVKNKSWVTRVQPTTAESSTVF*
Ga0070694_1017266962	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	WRTKRLLFLQVLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0070708_1011177372	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVAARPAVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0070707_1003734194	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	KKLLWLQILLWDLSAPFLAFGLRIGLVVLVVTNPALFVTAILPGWLVLLLIRYIFVPLRARDKLLGLFLYMFFYEGILYWLNLWALFTVRNKSWVTRTTTAQA*
Ga0073909_103519351	3300005526	Surface Soil	SFGLRIGLVVIVLTNPIVFFTAILPSWIMLLLIRYIFVPLRARDKLPGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRTPEQTQSRAPLELGEART*
Ga0070684_1016461472	3300005535	Corn Rhizosphere	IYTLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVAARPAVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0070686_1001062925	3300005544	Switchgrass Rhizosphere	LFLQVLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0070704_1005718102	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FLRQQRRWKRGYIRESIYTLTYAWRTKRLLFLQILFWDLTAPFLSFGLRVALVVTAVHEPRLVLTAILPSWIVLMLVRYILVPLRARDKLPGLFLYMMFYEVCLYWLNLWALLTIRNSSWVTRQATAQT*
Ga0070704_1021340012	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VRGFLRQQRRWKRGYIRESIYTLSYAWRNKRLLFLQILFWDLTAPFLSFGLRIGLVVTAWQAPGLLLTVILPSWIVLMLVRYVFVPLRARDKVLGLFLYMLFYEACLYWLNVWALFTVRNRSWVTRQVVAQA*
Ga0066700_106824252	3300005559	Soil	FLSFGLRVALAVTAIREPRLVLTVILPSWIVLMLIRYVFVPLRARDKLVGLFLYMVFYETCLYWLNVWALFTVKNKSWVTRQVVAQA*
Ga0066700_108257622	3300005559	Soil	APFLSFGLRIALAVTIVRDPRLVLTVILPSWVVLMLVRYCFVPLRARDKLLGLFLYMLFYEGCLYWLNIWALFTVKNRSWVTRQVSAQA*
Ga0070702_1003550431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0066905_1003119531	3300005713	Tropical Forest Soil	APFLSFGLRVALVVTAIQFPALVLTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQQTAQA*
Ga0066903_1069871601	3300005764	Tropical Forest Soil	FLRQQRRWKRGYIRESIYTLSYAWRTKRLLFLQVLFWDLSAPFLSFGLRVALLVTAIRYPALVFTTILPSWIVLMLIRYIFVPLRAREKLVGLFLYMLFYEVCLYWLNLWALFTVKNSSWVTRQHTAQA*
Ga0070717_102608991	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QQRRWKRGYVRESLFTLLYAWRTKKLLWLQILLWDLSAPFLSFGLRVGLVIIVVTNPAVFFTAILPSWVMLLLIRYIFVPLRAPDKLLGLFLYMLFYELCLYWLNLWALFTVRNKSWVTRTAMPQPA*
Ga0066656_106475992	3300006034	Soil	LKQQRRWKRGYVRESLFTLMYAWRVKKLLWLQILVWDLSAPFLAFGLRIGLIVVVVTNPTLFFTAILPSWVALLLIRYIFVPLRAPDKLLGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRAPAPQPV*
Ga0066652_1011012621	3300006046	Soil	FLSFGLRVALVVTAVREPRIVLTVILPSWILLMLMRYVFVPLRARDKVAGLFLYMLFYEACLYWLNVWALFTVRNKSWVTRQVSAQA*
Ga0070716_1012520452	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	YAWRNKRLLFLQILFWDLTAPFLSFGLRIGLVVTAWQAPGLLLTVILPSWIVLMLVRYVFVPLRARDKVLGLFLYMLFYEACLYWLNVWALFTVRNRSWVTRQVVAQA*
Ga0066659_106744531	3300006797	Soil	LVLKRNYDVVYVADAVSWTETPATVRGFLRQQRRWKRGYIRESIYTLSYAWRNKKMLFLQILLWDLTAPFLSLGLRLGLIVTAVHAPMFLVTVILPSWIVMMLVRYVFVPLRARDKVFGLFLYMLFYEACLYWLNIWALFTVKNRSWVTRQVAAQV*
Ga0066660_104484613	3300006800	Soil	PFLSCGLRIALAVTIVEDPRLVLTTILPSWVVLMLVRYCFVPLRARDKLLGLFLYMLFYEGCLYWLNIWALFTVKNRSWVTRQVTAQA*
Ga0075420_1015382971	3300006853	Populus Rhizosphere	VQILCWDLTAPFLSFGLRLALIVTVIANPRLVVTTILPSWIVLMLVRYIFVPLRAGRKLPGLLVYMLFYELCMYWLNLWALFTVRNTSWVTRTETAQA*
Ga0075424_1011211232	3300006904	Populus Rhizosphere	SFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0099829_102261402	3300009038	Vadose Zone Soil	GFLRQQRRWKRGCVRESIYTLSYAWRCKRLLFPQILFWDLTAPFLAFGLRIALIVTAVHNPTLLFRTILPSWIVLMLVRYIFVPLRAPKKLLGLFLYMLFYEGCLYWLNLWALFTVRNSSWGTRQVSAQR*
Ga0099830_116911802	3300009088	Vadose Zone Soil	YTLSYAWRCKRLLFLQILFWDLTAPFLAFGLRIALIVTAVHNPTLLFRAILPSWIVLMLVRYIFVPLRAPKKLLGLFLYMLFYEGCLYWLNLWALFTVRNNSWGTRQVSAQL*
Ga0105245_110989782	3300009098	Miscanthus Rhizosphere	FTLTYAWNVKPLLWLQIFFWDLSAPFLSLGLRLGIVVMAFQQPQLLLTVVLPSWIALLVVRYIFVPLRATRKLPGLLLYMFFYELCLYWLNLWALFTVRNKSWVTRTQTAQA*
Ga0066709_1008396501	3300009137	Grasslands Soil	TYAWRVKKLLWLQVLFWDLTAPFLSFGLRVALLFTIVAEPRLVVVVILPSWIVLMLVRYVFVPMRAPDKLFGLFLYMFFYEVCLYWVNIWALFTVRNKSWVTRAEVAQA*
Ga0066709_1030483083	3300009137	Grasslands Soil	GYIRESIYTLTYAWRNKKLLFLQILCWDLTAPFLSFGLRISLVVTAIRDPELILRFVLPSWIVLMLIRYIFVPLRAREKLLGLFLYMLFYETCLYWLNVWALLTVRNRSWVTRQVAAQA*
Ga0114129_121931552	3300009147	Populus Rhizosphere	YIRESIYTLTYAWRVKRLLFVQILCWDLTAPFLSFGLRLALIVTVIANPRLVVTTILPSWIVLMLVRYIFVPLRAGRKLPGLLVYMLFYEFCMYWLNLWALFTVRNTSWVTRTETAQA*
Ga0111538_110066772	3300009156	Populus Rhizosphere	VYVADAVSWTETPSTVRGFLRQQRRWKRGYIRESIYTLTYGWRVKRLLFVQILCWDLTAPFLSFGLRLALIVTVIANPRLVVTTILPSWIVLMLVRYIFVPLRAGRELPGLLVYMLFYELCMYWLNLWALFTVRNTSWVTRTETAQA*
Ga0105248_118943682	3300009177	Switchgrass Rhizosphere	WKRGYVRESLFTLLYAWRVKKLLWLQILVWDLSAPFLAFGLRIGLIVVVVTNPTLFFTAILPSWIALLLIRYIFVPLRAPDKLLGLFLYMFFYEGCLYWLNLWALFTVRNKSWVTRAPEPQPA*
Ga0126308_103869481	3300010040	Serpentine Soil	QRRWKRGYIRESIYTLTYAWRVKPLLFMQILCWDLTAPFLSFGLRIALIVTAVTHPALLVTTIVPSWILLMLVRYVFVPLRAGQKLPGLLLYMFFYELCLYWLNLWALLTVKNKSWVTRTATSQA*
Ga0126308_111440761	3300010040	Serpentine Soil	RESIFTLTYAWRVKRLLWLQIFAWDLTAPFLSFGLRIGLIVAVVRNPLLLPLVVLPSWIGLMLMRYILVPLRAWRKLPGLFLYMLFYELCLYWLNLWALFTVKNRSWVTRVHHAGPSGGTVF*
Ga0126314_112546521	3300010042	Serpentine Soil	EAISWTETPSTVMSFVRQQRRWKRGYIRESIFTLTYAWRVKRLLWLQIFAWDLTAPFLSFGLRIGLIVAVVRNPLLLPLVVLPSWIGLMLMRYILVPLRAWRKLPGLFLYMLFYELCLYWLNLWALFTVKNRSWVTRVHHAGSSGGTVF*
Ga0126310_105947792	3300010044	Serpentine Soil	FLAFGMRVGLIVVIATNPTLFLTAILPSWLMLLLIRYSFVPLRARDKLLGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRAPASQAAVPANA*
Ga0126311_109854621	3300010045	Serpentine Soil	VPEAISWTETPSTVMSFVRQQRRWKRGYIRESIFTLTYAWRVKRLLWLQIFAWDLTAPFLSFGLRIGLIVAVVRNPLLLPLVVLPSWIGLMLMRYILVPLRAWRKLPGLFLYMLFYELCLYWLNLWALFTVKNRSWVTRVHHAGPSGGTVF*
Ga0126382_114852272	3300010047	Tropical Forest Soil	RVALVVTAVHEPRLVLTAILPSWIVLMLVRYILVPLRARDKLPGLFLYMVFYEVCLYWLNLWALLTVRNTSWVTRQATAQA*
Ga0126306_106396831	3300010166	Serpentine Soil	WDLTAPFLSFGLRIGLIVAVVRNPLLLPLVVLPSWIGLMLMRYILVPLRAWRKLPGLFLYMLFYELCLYWLNLWALFTVKNRSWVTRVHHAGPSGGTVF*
Ga0134070_104328482	3300010301	Grasslands Soil	LSLGLRLALLFTVIHDPRIFLTAILPGWIILMLVRYIFVPLRARGKLPGLFLYMLFYETCLYWLNLWALFTVKNKSWVTRGVTAQA*
Ga0134088_105374681	3300010304	Grasslands Soil	YVEEAVSWTETPATVRGFLRQQRRWKRGYIRESIYTLSYAWRVKRLLWLQILCWDLTAPFLSFGLRIALAVTVIANPRLVVTTILPSWIVLMLVRYCFVPLRARDKLPGLFLYMLFYEGCLYWLNLWALFTVKNRSWVTRTVSAQA*
Ga0126370_123767892	3300010358	Tropical Forest Soil	FLSFGLRVALLVTAIRYPALVFTTILPSWIVLMLIRYIFVPLRAREKLIGLFLYMLFYELCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0105239_111741252	3300010375	Corn Rhizosphere	TAPFLSFGLRLALIVTVIANPRLVVTTILPSWIVLMLVRYIFVPLRAGRKLPGLLVYMLFYELCMYWLNLWALFTVKNTSWVTRTETAQA*
Ga0134123_124897502	3300010403	Terrestrial Soil	QILLWDLSAPFLAFGLRIGLVVLVVTNPSLFVTAILPGWILLLLIRYIFVPLRARDKLLGLFLYMFFYELCLYWLNLWALFTVRNKSWVTRTQTAQA*
Ga0137365_100380505	3300012201	Vadose Zone Soil	VRGFLRQQRRWKRGYIRESIYTLSYAWRNKKMLFLQILLWDLTAPFLSLGLRLGLVVTAVHAPKFLLTVILPSWVVMMLARYVFVPLRARDKVFGLFLYMLFYETCLYWLNIWALFTVKNRSWVTRQVAAQA*
Ga0137363_112255731	3300012202	Vadose Zone Soil	TLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLFVTVAARPGIFLTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRATTAQA*
Ga0137399_103434532	3300012203	Vadose Zone Soil	VRGFLRQQRRWKRGYIRESIYTLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVVARPGLFVTGILPSWIVLLLVRYIFVPLRARDKLVGLFVYMLFYEGCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0137380_108419631	3300012206	Vadose Zone Soil	FLRQQRRWKRGYIRESIYTLSYAWRNKKMLFLQILLWDLTAPFLSLGLRLGLVVTAVHAPKFLLTVILPSWVVMMLVRYVFVPLRARDKVFGLFLYMLFYETCLYWLNIWALFTVKNRSWVTRQVAAQA*
Ga0137379_101947304	3300012209	Vadose Zone Soil	VRGFLRQQRRWKRGYIRESIYTLSYAWRNKKMLFLQILLWDLTAPFLSLGLRLGLVVTAVHAPKFLLTVILPSWVVMMLVRYVFVPLRARDKVFGLFLYMLFYETCLYWLNIWALFTVKNRSWVTRQVAAQA*
Ga0137360_114482592	3300012361	Vadose Zone Soil	VAEAVSWTETPATVRGFLRQQRRWKRGYIRESSYTLSYAWRNKKMLFLQILLWDLTAPFLSLGLRLGLVVTAVHAPKFLLTVILPSWVVMMLVRYVFVPLRARDKVFGLFLYMLFYETCLYWLNI
Ga0137390_104439851	3300012363	Vadose Zone Soil	FWDLTAPFLAFRLRIALIVTAVHNPTLLFRTILPSWIVLMLVRYIFVPLRAPKKLLGLFLYMLFYEGCLYWLNLWALFTVRNSSWGTRQVSAQR*
Ga0150984_1041430642	3300012469	Avena Fatua Rhizosphere	PLFTLTYAWRVKKLLWLQILVWDLTAPFLAFGLRIGLIVVVVTNPTLFFTAILPSWVALLLIRYIFVPLRAPDKLLGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRAPTTQPALPANA
Ga0137397_106561231	3300012685	Vadose Zone Soil	IRESIYTLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVVARPGLFLTVILPSWVLLLLVRYIFVPLRARDKLVGLFVYMLFYEGCMYWLNLWALFTVKNRSWVTRAQTAQA*
Ga0157285_103381521	3300012897	Soil	PLLFLQILCWDLTAPFLSFGLRIALIVTAVTNPSLIVTTIVPSWIVLMLVRYVFVPLRAGRKLPGLLVYMFFYELCLYWLNLWALLTVRNKSWVTRSATAQI*
Ga0137394_108861421	3300012922	Vadose Zone Soil	YVRESIYTLTYAWRTKRLLFLQILCWDLTAPFLSFGLRIALVVTAANNPLLLVKAILPSWIVLMLVRYVFVPLRAPNKLLGLFLYMLFYEGCLYWLNLWALFTVRNKSWVTRQVTAQA*
Ga0137413_114284452	3300012924	Vadose Zone Soil	CWDLTAPFLAFGLRIALAVTAWHDPSLLLRAILPSWVVLMLVRYIFVPLRAPKQLLGLFLYMLFYECCLYWLNLWALFTVRNGSWVTRQVSAQA*
Ga0137404_113449082	3300012929	Vadose Zone Soil	WKRGYIRESIYTLSYAWRGKKLLFLQILCWDLTAPFLAFGLRIALVVTAWHDPSLLFRAILPSWVVLMLVRYIFVPLRAPKKLLGLFLYMLFYECCLYWLNLWALFTVRNGSWVTRQVSAQA*
Ga0164299_102833521	3300012958	Soil	SWTETPATVRGFLRQQRRWKRGYVRESIYTLTYAWRCKPLLFLQILLWDLTAPFLSFGLRVALAVTIFTRPSLVLTTILPSWIMLLLVRYILVPIRAREKVVGLFVYMLFYECCLYWLNLWALFTIKNRSWVTRTSSAQS*
Ga0164302_103088481	3300012961	Soil	APFLSFGLRIGLIVTVIHEPMFVLTVILPSWILMALVRYVFVPLRARDKVFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQATAQA*
Ga0134087_101252071	3300012977	Grasslands Soil	PFLAFGLRIGLIVVVVTNPTLFLTAILPSWVALLLIRYIFVPLRAPDKVLGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRTPAPQPV*
Ga0164309_107035322	3300012984	Soil	VSWTETPATVRGFLRQQRRWKRGYIRESIYTLSYAWRTKRLLFLQVLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVG
Ga0164308_103271164	3300012985	Soil	LSFGLRIGLIVTVIHEPMFVLTVILPSWILMALVRYVFVPLRARDKVFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQATAQA*
Ga0164306_103093622	3300012988	Soil	VLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA*
Ga0157370_113760891	3300013104	Corn Rhizosphere	IRESIYTLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVAARPAVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0157369_126881962	3300013105	Corn Rhizosphere	WDLTAPFLSFGLRIGLVVTVAARPAVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA*
Ga0157375_101818891	3300013308	Miscanthus Rhizosphere	WRCKPLLFLQILLWDLTAPFLSFGLRVALAVTIFTRPSLVLTTILPSWIMLLLVRYILVPIRAREKVVGLFVYMLFYECCLYWLNLWALFTIKNRSWVTRTSSAQS*
Ga0134078_104273531	3300014157	Grasslands Soil	NKRLLFLQILLWDLTAPFLSLGLRIGLVVTAIQAPQLLLTVILPSWIVLMLVRFVFVPLRAREKLPGLFLYMLFYEGCLYWLNIWALFTVKNRSWVTRQAAAQA*
Ga0157380_132674651	3300014326	Switchgrass Rhizosphere	VLFWDLSAPFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVALRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQ
Ga0182001_101513722	3300014488	Soil	KRDYDVVYVGEAISWTETPATVRGFLRQQRRWKRGYIRESIYTLSYAWRNKKLLFLQILCWDLTAPFLSFGLRIALAVTIVSEPRLVLTTILPSWIVLMLVRYIFVPLRARDKLFGLLLYMLFYELCLYWLNLWALFTVKNKSWVTRQVTAQA*
Ga0137412_110865392	3300015242	Vadose Zone Soil	IYTLSYAWRGKKLLFLQILCWDLTAPFLAFGLRIALAVTAWHDPSLLLRAILPSWVVLMLVRYIFVPLRAPKQLLGLFLYMLFYECCLYWLNLWALFTVRNGSWVTRQVSAQA*
Ga0137403_113564982	3300015264	Vadose Zone Soil	PFLAFGLRIALVVTAWHDPSLLFRAILPSWVVLMLVRYIFVPLRAPKKLLGLFLYMLFYECCLYWLNLWALFTVRNGSWVTRQVSAQA*
Ga0132258_132287291	3300015371	Arabidopsis Rhizosphere	TVDGFLKQQRRWKRGYVRESLFTLMYAWRNKKLLWLQILLWDLSAPFLAFGLRIGLIVVVVTNPTLFFTAILPSWIFLLLIRYIFVPLRAPDKLPGLFLYMFFYEGCLYWLNLWALFTVRNKSWVTRAPEPQPA*
Ga0132256_1017298632	3300015372	Arabidopsis Rhizosphere	LQILFWDLTALFLSFGLRVALMVTIVARPGLVLTTILPSWIMLLLVRYILVPIRAREKVVGLFVYMLFYECCLYWLNLWALFTVKNRSWVTRTSTAQA*
Ga0132257_1010950581	3300015373	Arabidopsis Rhizosphere	VAEAVSWTETPATVRGFVRQQRRWKRGYVRESIYTLTYAWRCKRLLFLQILFWDLTAPFLSFGLRVALMVTIVARPGLVLTTILPSWIVLLLVRYILVPIRAREKVGGLFVYMLFYECCLYWLNLWALFTVKNRSWVTRTSTAQA*
Ga0132255_1038959252	3300015374	Arabidopsis Rhizosphere	LQILLWDLTAPFLSFGLRIALVVTAFAEPRLLVTTILPSWIVLLLVRYCFVPLRAPGKLPGLFLYMLFYECCLYWLNLWALFTVKNRSWVTRTVTAQA*
Ga0184608_103993521	3300018028	Groundwater Sediment	VPCLIVFKSAPFLSFGLRIGLIITVIHAPLFVLTVILPSWIVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQIAAQA
Ga0066662_114409102	3300018468	Grasslands Soil	ETPATVRGFLRQQRRWKRGYIRESIYTLSYAWRNKRLLFLQVLLWDLTAPFLSFGLRIALAVTIVRDPRLVLTVILPSWVVLMLVRYCFVPLRARDKLLGLFLYMLFYEGCLYWLNIWALFTVKNRSWVTRQVSAQA
Ga0173482_102087361	3300019361	Soil	FLSFGLRIGLLITVIHAPLFVLTVIVPSWVVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQVAAQA
Ga0193701_10738082	3300019875	Soil	SFGLRIGLIITVIHAPLFVLTVILPSWIVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQVAAQA
Ga0247691_10404661	3300024222	Soil	LLFLQILLWDLTAPFLSFGLRLALAVTVFTRPGLVLTTILPSWIVLLLVRYIFVPLRARDKLLGLFVYMLFYEGCMYWLNLWALFTVKNRSWVTRASSAQA
Ga0247673_10258272	3300024224	Soil	FGLRVALLVTVIEYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA
Ga0179589_105283891	3300024288	Vadose Zone Soil	FLSFGLRIGLFVTVAARPGIFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRATTAQA
Ga0207654_100199316	3300025911	Corn Rhizosphere	WRTKRLLFLQVLFWDLSAPFLSFGLRVALLVTVIEYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA
Ga0207654_112593051	3300025911	Corn Rhizosphere	GYIRESIYTLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVAARPAVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA
Ga0207664_110094991	3300025929	Agricultural Soil	VAEAVSWTETPATVRGFLRQQRRWKRGYIRESIYTISYAWRVKKLLWVQILIWDLSAPFLSFGLRIGLLIIVFENPKLFFTAILPSWLMLLFIRYSFVPLRARDKVLGLLVYMFFYEFCMYWLNLWALFTVRNKSWVTRTATAQA
Ga0207664_117008721	3300025929	Agricultural Soil	GLRIGLVVIVVTNPIVFFTAILPSWIMLLLIRYIFVPLRARDKLPGLFLYMFFYECCLYWLNLWALFTVRNKSWVTRGASAQS
Ga0207706_110085791	3300025933	Corn Rhizosphere	WDRTAPFLSFGLRIALIVTAVTNPSLIVTTIVPSWIVLMLVRYVFVPLRAGRKLPGLLVYMFFYELCLYWLNLWALLTVRNKSWVTRSATAQI
Ga0207669_116799751	3300025937	Miscanthus Rhizosphere	LSAPFLAFGLRVGLVVLVLTNPMLFFTAILPGWIVLLLIRYIFVPLRAPEKLPGLFLYMFFYELCLYWLNLWALFTVRNKSWVTRTQTAQA
Ga0209378_11926103	3300026528	Soil	LTAPFLSLGLRLGLIVTAVHAPMFLVTVILPSWIVMMLVRYVFVPLRARDKVFGLFLYMLFYEACLYWLNIWALFTVKNRSWVTRQVAAQV
Ga0209160_11968813	3300026532	Soil	YIRESIYTLSYAWRNKKMLFLQILLWDLTAPFLSLGLRLGLIVTAVHAPMFLVTVILPSWIVMMLVRYVFVPLRARDKVFGLFLYMLFYEACLYWLNIWALFTVKNRSWVTRQVAAQV
Ga0209811_100139034	3300027821	Surface Soil	APFLSFGLRVALLVTVIRYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA
Ga0209180_104126541	3300027846	Vadose Zone Soil	GFLRQQRRWKRGCVRESIYTLSYAWRCKRLLFPQILFWDLTAPFLAFGLRIALIVTAVHNPTLLFRTILPSWIVLMLVRYIFVPLRAPKKLLGLFLYMLFYEGCLYWLNLWALFTVRNSSWGTRQVSAQR
Ga0247675_10450132	3300028072	Soil	FLSFGLRVALLVTVIRFPALVVTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA
Ga0247684_10810632	3300028138	Soil	WDLSAPFLSFGLRVALLVTVIEYPALVFTTILPSWIVLMLIRYIFVPLRARDKLVGLFLYMLFYEVCLYWLNLWALLTVKNSSWVTRQHTAQA
Ga0307293_103027801	3300028711	Soil	KLLFLQILLWDLTAPFLSFGLRIGLIITVIHAPLFVLTVILPSWVVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSLVTRQVAAQA
Ga0307317_102794391	3300028720	Soil	AQAWLRRRVRGRGSELDGDTGNRSGLLRQQRRWKRGYIRESIYTLTYAWRCKKLLFLQILVWDLTAPFLSFGLRIGLVVTVAARPAVFVTAILPSWIILLLIRYIFVPLRAPDKLIGLFAYMVFYECCMYWLNLWALFTVKNRSWVTRASTAQA
Ga0307319_101450293	3300028722	Soil	RNKKLLFLQILLWDLTAPFLSFGLRIGLIITVIHAPLFVLTVILPSWVVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQVAAQT
Ga0307316_102524812	3300028755	Soil	LLWDLTAPFLSFGLRIGLIITVIHAPLFVLTVILPSWIVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQVAAQA
Ga0307280_102927331	3300028768	Soil	IYTLSYAWRNKKLLFLQILLWDLTAPFLSFGLRIGLIITVIHAPLFVLTVILPSWIVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQVAAQA
Ga0307320_101902623	3300028771	Soil	VRGFLRQQRRWKRGYIRESIYTLSYAWRNKKLLFLQILLWDLTAPFLSFGLRIGLIITVIHAPLFVLTVILPSWVVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQVAAQA
Ga0307286_101126882	3300028876	Soil	IRESICTLSYAWRKKPLLFAQIALWDLTAPFLSFGLRIALVLTAVREPVLILTAVLPSWIVLMLIRYIFVPLRARDKLLGLFLYMLFYEVCLYWLNLWALFTVKNKSWVTRQSVAQA
Ga0307304_102165371	3300028885	Soil	LSYAWRNKKLLFLQILLWDLTAPFLSFGLRIGLIITVIHAPLFVLTVILPSWVVMALVRYVFVPLRARDKLFGLFLYMLFYESCLYWLNIWALFTVKNRSWVTRQIAAQA
Ga0247826_107746661	3300030336	Soil	RVKKLLWLQILLWDLSAPFLAFGLRMGLIVLVIEDPKLFFTAILPSWLLLLLVRYSLVPIRARDKMLGTLLYMFFYEACLYWLNLWALFTVRNKSWVTRTATAQA
Ga0307468_1008282651	3300031740	Hardwood Forest Soil	WRVKPLLFLQILCWDLTAPFLSFGLRIALIVTAVTNPSLIVTTIVPSWIVLMLVRYVFVPLRAGRKLPGLLVYMFFYELCLYWLNLWALLTVRNKSWVTRSATAQI
Ga0308174_119402282	3300031939	Soil	TAPFLSFGLRIALAVTAFGDPQLILRVILPSWVMLLLVRYIFVPLRAPRKLLGLFLYMLFYECCLYWLNLWALFTVKNKSWVTRQVSAQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073903

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences