Metagenome Family F073944

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073944
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	70 residues
Representative Sequence	MRSIPTELAGIPVWLLLFGAAGFLLFFFKIAGNPNEREELSKLRLFFLIATILFALAGIADFVLWASPSS
Number of Associated Samples	88
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	30.83 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.500 % of family members)
Environment Ontology (ENVO)	Unclassified (45.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.12% β-sheet: 0.00% Coil/Unstructured: 43.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00069	Pkinase	34.17
PF04185	Phosphoesterase	8.33
PF05506	PLipase_C_C	5.83
PF01979	Amidohydro_1	3.33
PF10518	TAT_signal	2.50
PF02775	TPP_enzyme_C	1.67
PF08240	ADH_N	0.83
PF04116	FA_hydroxylase	0.83
PF13535	ATP-grasp_4	0.83
PF17147	PFOR_II	0.83
PF00005	ABC_tran	0.83
PF13602	ADH_zinc_N_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	136.67
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	14.17
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.17 %
Unclassified	root	N/A	35.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.17 %
Unclassified	root	N/A	35.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.17 %
Unclassified	root	N/A	35.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	3.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.83 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	3.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.83 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.83 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	3.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.83 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16575845	All Organisms → cellular organisms → Bacteria	33330	Open in IMG/M
2088090014\|GPIPI_16804305	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
2170459005\|F1BAP7Q01COST0	Not Available	532	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101991742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1803	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101992134	Not Available	687	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101993932	Not Available	579	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101994852	Not Available	626	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101994946	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300000955\|JGI1027J12803_100252212	Not Available	532	Open in IMG/M
3300001867\|JGI12627J18819_10034641	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300003659\|JGI25404J52841_10094848	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300004156\|Ga0062589_100012679	All Organisms → cellular organisms → Bacteria	3610	Open in IMG/M
3300004267\|Ga0066396_10061219	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300004479\|Ga0062595_102698032	Not Available	500	Open in IMG/M
3300004633\|Ga0066395_10012150	All Organisms → cellular organisms → Bacteria	3219	Open in IMG/M
3300005332\|Ga0066388_100129252	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300005332\|Ga0066388_100702443	Not Available	1618	Open in IMG/M
3300005332\|Ga0066388_101039003	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300005332\|Ga0066388_105842282	Not Available	622	Open in IMG/M
3300005439\|Ga0070711_100862028	Not Available	771	Open in IMG/M
3300005440\|Ga0070705_100176994	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005459\|Ga0068867_101092778	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005467\|Ga0070706_100128579	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300005471\|Ga0070698_100439355	Not Available	1240	Open in IMG/M
3300005539\|Ga0068853_100309843	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300005617\|Ga0068859_100492771	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300005764\|Ga0066903_104519088	Not Available	742	Open in IMG/M
3300005843\|Ga0068860_101927380	Not Available	612	Open in IMG/M
3300005937\|Ga0081455_10372767	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005983\|Ga0081540_1242640	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006173\|Ga0070716_100032626	All Organisms → cellular organisms → Bacteria	2842	Open in IMG/M
3300006175\|Ga0070712_100974444	Not Available	733	Open in IMG/M
3300006852\|Ga0075433_10604116	Not Available	963	Open in IMG/M
3300006854\|Ga0075425_100087943	All Organisms → cellular organisms → Bacteria	3520	Open in IMG/M
3300006854\|Ga0075425_100380048	Not Available	1627	Open in IMG/M
3300006854\|Ga0075425_100596012	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300006854\|Ga0075425_103022052	Not Available	514	Open in IMG/M
3300006871\|Ga0075434_101954548	Not Available	592	Open in IMG/M
3300006914\|Ga0075436_100262300	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300007076\|Ga0075435_100720451	Not Available	867	Open in IMG/M
3300009101\|Ga0105247_10713584	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009545\|Ga0105237_11263413	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300009553\|Ga0105249_10309205	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300009792\|Ga0126374_10514292	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010043\|Ga0126380_11488219	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010046\|Ga0126384_10881952	Not Available	807	Open in IMG/M
3300010358\|Ga0126370_10113120	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300010358\|Ga0126370_10127363	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300010358\|Ga0126370_10192968	Not Available	1531	Open in IMG/M
3300010358\|Ga0126370_10356487	Not Available	1184	Open in IMG/M
3300010358\|Ga0126370_10889182	Not Available	803	Open in IMG/M
3300010358\|Ga0126370_11594563	Not Available	624	Open in IMG/M
3300010360\|Ga0126372_10187576	Not Available	1705	Open in IMG/M
3300010360\|Ga0126372_10228600	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300010360\|Ga0126372_12174453	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010362\|Ga0126377_10454961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300010362\|Ga0126377_10906276	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010362\|Ga0126377_10971785	Not Available	914	Open in IMG/M
3300010362\|Ga0126377_12603278	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010362\|Ga0126377_12684266	Not Available	573	Open in IMG/M
3300010366\|Ga0126379_10004643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9082	Open in IMG/M
3300010366\|Ga0126379_11635981	Not Available	749	Open in IMG/M
3300010366\|Ga0126379_12598249	Not Available	604	Open in IMG/M
3300010366\|Ga0126379_13226364	Not Available	546	Open in IMG/M
3300010376\|Ga0126381_100421079	Not Available	1866	Open in IMG/M
3300010398\|Ga0126383_10628834	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300012202\|Ga0137363_11480344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	570	Open in IMG/M
3300012205\|Ga0137362_10380422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1223	Open in IMG/M
3300012210\|Ga0137378_11076509	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300012923\|Ga0137359_10034687	All Organisms → cellular organisms → Bacteria	4346	Open in IMG/M
3300012948\|Ga0126375_10015867	All Organisms → cellular organisms → Bacteria	3364	Open in IMG/M
3300012957\|Ga0164303_11476551	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012971\|Ga0126369_10622219	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300012971\|Ga0126369_11016446	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300013306\|Ga0163162_12710954	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300014968\|Ga0157379_10776303	Not Available	903	Open in IMG/M
3300015264\|Ga0137403_10163929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	2179	Open in IMG/M
3300015371\|Ga0132258_10283975	All Organisms → cellular organisms → Bacteria	4063	Open in IMG/M
3300015372\|Ga0132256_100976650	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300015374\|Ga0132255_100320138	All Organisms → cellular organisms → Bacteria → Acidobacteria	2238	Open in IMG/M
3300016319\|Ga0182033_10149089	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300020579\|Ga0210407_10010310	All Organisms → cellular organisms → Bacteria	6973	Open in IMG/M
3300021168\|Ga0210406_10004250	All Organisms → cellular organisms → Bacteria	15435	Open in IMG/M
3300021560\|Ga0126371_11332472	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300024232\|Ga0247664_1016893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1691	Open in IMG/M
3300024283\|Ga0247670_1039580	Not Available	848	Open in IMG/M
3300024331\|Ga0247668_1080492	Not Available	658	Open in IMG/M
3300025914\|Ga0207671_10715406	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300025916\|Ga0207663_10766451	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300025924\|Ga0207694_10561049	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300025934\|Ga0207686_11039175	Not Available	666	Open in IMG/M
3300025939\|Ga0207665_10015411	All Organisms → cellular organisms → Bacteria	5019	Open in IMG/M
3300025961\|Ga0207712_10386027	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300026319\|Ga0209647_1269014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	570	Open in IMG/M
3300026320\|Ga0209131_1389764	Not Available	520	Open in IMG/M
3300026489\|Ga0257160_1000325	Not Available	3196	Open in IMG/M
3300027371\|Ga0209418_1080640	Not Available	584	Open in IMG/M
3300027376\|Ga0209004_1000901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3447	Open in IMG/M
3300027874\|Ga0209465_10000851	All Organisms → cellular organisms → Bacteria	13883	Open in IMG/M
3300028381\|Ga0268264_10634481	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300028381\|Ga0268264_11583988	Not Available	666	Open in IMG/M
3300031057\|Ga0170834_106998386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2677	Open in IMG/M
3300031231\|Ga0170824_115512137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2805	Open in IMG/M
3300031544\|Ga0318534_10492405	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031679\|Ga0318561_10134883	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300031720\|Ga0307469_11915530	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031723\|Ga0318493_10792063	Not Available	534	Open in IMG/M
3300031754\|Ga0307475_10208826	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300031771\|Ga0318546_10741693	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031820\|Ga0307473_10140530	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300031962\|Ga0307479_10051773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3947	Open in IMG/M
3300031962\|Ga0307479_12184007	Not Available	500	Open in IMG/M
3300032094\|Ga0318540_10450224	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032174\|Ga0307470_11333279	Not Available	589	Open in IMG/M
3300032180\|Ga0307471_100033275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4011	Open in IMG/M
3300032180\|Ga0307471_100602541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1258	Open in IMG/M
3300032180\|Ga0307471_101202184	Not Available	922	Open in IMG/M
3300032180\|Ga0307471_104061554	Not Available	517	Open in IMG/M
3300032205\|Ga0307472_100232413	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300032205\|Ga0307472_101176523	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.83%
Host-Associated	Host-Associated	24.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.83%
Plants	Host-Associated → Plants	24.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	15.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.50%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03956160	2088090014	Soil	MRSAIPTELAGIPVWLVLFVAAGLLLFFFKIAGNPSQAEKLSTLRLFFLVATILFALAGIADFVIWVHPSP
GPIPI_03649960	2088090014	Soil	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPDDREELSKLRLFFLIATILFALAGIADFVLWATPLS
E41_03906520	2170459005	Grass Soil	MPRAVPTEFAGIPVWLILFVVAGFLLFLFKAAGNPQNRPQNGEELSGLRVFFLIATLLFAAAGIADFVVWTTPR
INPhiseqgaiiFebDRAFT_1019917422	3300000364	Soil	MRSAIPTELAGIPVWLVLFVAAGLLLFFFKIAGNPSQAEKLSTLRLFFLVATILFALAGIADFVIWVHPSP*
INPhiseqgaiiFebDRAFT_1019921341	3300000364	Soil	LYHPSCAAPYMRSIPTELAGVPVWLLLFVIAGFLLFFFKIAGNPSQNEELSKLRLFFLIASILLAIAGIADFVLWATPSS*
INPhiseqgaiiFebDRAFT_1019939321	3300000364	Soil	MRSXPTELAGIPVWLLLFVAAGFLLFFFXIAGNPXDREELSKLRLFXLIATILXAXAGIADFVLWATPXS*
INPhiseqgaiiFebDRAFT_1019948521	3300000364	Soil	IPIWLLLFVAAGFLLFFFKIAGNPSQDEKLSTLRLFFLIATILFALAGIADFVIWASPSS
INPhiseqgaiiFebDRAFT_1019949463	3300000364	Soil	MRSIPTELAGVPIWLLLFVAAGFLLFFFKIAGSGPENREELSKLRIFFLIATILLAIAGIADFVIWARPSS*
JGI1027J12803_1002522122	3300000955	Soil	MRSFPTELAGIPVWLLLFVAAGFLLFFFKIAGNPNDREELSKLRLFLLIATILLAVAGIADFVLWATPSS*
JGI12627J18819_100346412	3300001867	Forest Soil	VRLSIPTEFAGIPVWLILFTIAGFMLFLFKVAGNPQDRPQNSEEISSLRIFFLIATLLFAVAGIADFVVWATPR*
JGI25404J52841_100948482	3300003659	Tabebuia Heterophylla Rhizosphere	WRSGNIPASRLVAMRSIPTEFAGIPVWLLLFAAAGFLLFFFKIAGNPSQQEELSRLRLFLLIASILLAIAGIADFVVWASPAS*
Ga0062589_1000126792	3300004156	Soil	MRSIPAELAGVPVWLLLFLIAGFLLFFFKIAGNPSENEELSKLRLFFLIASVLLAIAGIADFVLWATPSS*
Ga0066396_100612191	3300004267	Tropical Forest Soil	VWLVLFAIAGFLLFFFKVAHNPSELEELSKLRLFILIATILFAIAGIADFVIWASPSS*
Ga0062595_1026980321	3300004479	Soil	KSMRSIPTEFAGIPVWLILFALAGFLLFFFKIAGNPAEREELSRLRLFFLLATILFAIAGIADFAIWVSPP*
Ga0066395_100121501	3300004633	Tropical Forest Soil	WLVLFAIAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIADFVIWASPSS*
Ga0066388_1001292523	3300005332	Tropical Forest Soil	LRSELLDSVFVMRSIPTEFAGIPVWLILFAVAGFLLFFFKIAGNPAEREELSKLRLFFLVATILFAIAGIADFVIWASPPS*
Ga0066388_1007024431	3300005332	Tropical Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPSQQEELSRPRLFFLIAAILFAIAGIVDFVVWASPSS*
Ga0066388_1010390032	3300005332	Tropical Forest Soil	MRSFPTELAGIPVWLLLFAAAGFLLFFFKIAGNPNDREELSKLRLFLLIATILLALAGIADFVLWATPSS*
Ga0066388_1058422822	3300005332	Tropical Forest Soil	IPTEFAGIPVWLMLFTVAGFLLFLFKVGGSQEQQEELSKLRLFFLIATILFAVAGIADFVVWALPST*
Ga0070711_1008620282	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPTELAGVPVWLLLFVIAGFLLFFFKIAGNPSQNEELSKLRLFFLIASILLAIAGIADFFTWAMPSS*
Ga0070705_1001769943	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASP
Ga0068867_1010927782	3300005459	Miscanthus Rhizosphere	MRSIPAELAGVPVWLLLFLIAGFLLFFFKIAGNPSENEELSKLRLFFLIASILLAIAGIADFVLWATPSS*
Ga0070706_1001285793	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASPS
Ga0070698_1004393551	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0068853_1003098432	3300005539	Corn Rhizosphere	MRSIPTELAGIPVWLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPSS*
Ga0068859_1004927712	3300005617	Switchgrass Rhizosphere	MRSIPTELAGIPVWLLLFVAAGLLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0066903_1045190883	3300005764	Tropical Forest Soil	MRSIPTELAGIPVWLFLFVAAGFLLFFFKIAGKPNDREELSKLRLFFLIATILFALAGIADFVVWASPSS*
Ga0068860_1019273801	3300005843	Switchgrass Rhizosphere	MRAIPTELAGVPVWLLLFVIAGFLLFFFKIAGNPSQNEELSKLRLFFLIASILLAIAGIADFFTWAMPS
Ga0081455_103727671	3300005937	Tabebuia Heterophylla Rhizosphere	MRSIPTELAGVPIWLILFVIAGFLLFFFKVAHNPSEHEEISKPRLFFLIATILFALAGIADFVIWASPPS*
Ga0081540_12426401	3300005983	Tabebuia Heterophylla Rhizosphere	AWRSGNIPASRLVAMRSIPTEFAGIPVWLLLFAAAGFLLFFFKIAGNPSQQEELSRLRLFLLIASILLAIAGIADFVVWASPAS*
Ga0070716_1000326263	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPDDREEFSKLRLFFLIATILFALAGIADFVLWATPAS*
Ga0070712_1009744442	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPHDREELSKLRLFFLIATILFALAGIADFVLWATPSS*
Ga0075433_106041162	3300006852	Populus Rhizosphere	MRSIPTELAGIPVWLVLFVVAGFLLFFFKIAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPAL*
Ga0075425_1000879431	3300006854	Populus Rhizosphere	LVMRSIPTELAGIPVWLVLFVVAGFLLFFFKIAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPAL*
Ga0075425_1003800483	3300006854	Populus Rhizosphere	MRSIPTELAGIPVWLLLFGAAGFLLFFFKIAGNPNEREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0075425_1005960121	3300006854	Populus Rhizosphere	TEFAGIPVWLILFALAGFLLFFFKIAGNPAEREELSRLRLFFLLATILFAIAGIADFAIWVSPP*
Ga0075425_1030220522	3300006854	Populus Rhizosphere	SMRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0075434_1019545481	3300006871	Populus Rhizosphere	MRSIPTELAGIPVWLMLFVAAGFLLFFFKIAGNPNEREELSKLRLFFLVATILFALAGIADFVLWASPSS*
Ga0075436_1002623001	3300006914	Populus Rhizosphere	ELAGIPVWLLLFGAAGFLLFFFKIAGNPNKREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0075435_1007204512	3300007076	Populus Rhizosphere	MHSIPTEFAGIPVWLMLFAVAGFLLFLCKAGGSPEKQEELTKLRLFFLIATILFAIAGIADFV
Ga0105247_107135841	3300009101	Switchgrass Rhizosphere	MRSIPTELAGIPVWLMLFVAAGFLLFFFKIAGNPNEREELSKLRLFFLVATILFALAGIA
Ga0105237_112634131	3300009545	Corn Rhizosphere	GIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0105249_103092052	3300009553	Switchgrass Rhizosphere	MRSIPTELAGVPVWLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPSS*
Ga0126374_105142922	3300009792	Tropical Forest Soil	MRSIPTEFAGIPVWLILFAVAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIADFVIWASPSS*
Ga0126380_114882192	3300010043	Tropical Forest Soil	MLSIPTELAGIPVWLILFAVAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIADFVIWASPSS*
Ga0126384_108819522	3300010046	Tropical Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPSQQEELSKLRLFFLIAAILFAIAGIADFVIWASPSS*
Ga0126370_101131203	3300010358	Tropical Forest Soil	MQSIPTELAGVPVWLILFAAAGFLLFFFKIAGNPAESERLSKLRLFFLIATILFAIAGVADFVIWASPSS*
Ga0126370_101273633	3300010358	Tropical Forest Soil	VRSIPSELVGIPVWLILFAVAGFLLFFFKIAHNPAEREELSKLRLFFLIAAILFAIAGIADFVIWASPPA*
Ga0126370_101929683	3300010358	Tropical Forest Soil	VRSIPSELVGIPVWLILFAVAGFLLFFFKIAHNPAEREELSRLRLFFLIAAILFAIAGVADFVIWASPPA*
Ga0126370_103564871	3300010358	Tropical Forest Soil	MRSIPTELAGIPVWLVLFAIAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIVDFVIWASPSS
Ga0126370_108891822	3300010358	Tropical Forest Soil	MHSIPTELAGIPVWLVLFFVAGFLLFFFKIAGKPSEREELSKLRLFFLIATILFAIAGIADFVVWANPSS*
Ga0126370_115945631	3300010358	Tropical Forest Soil	MHSIPTEFAGIPVWLMLFTVAGFLLFLFKVGGSQEQQEELSKLRLFFLIATILFAVAGIADFVVWALPST*
Ga0126372_101875762	3300010360	Tropical Forest Soil	MRSIPTELAGIPVWLVLFAIAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIVDFVIWASPSS*
Ga0126372_102286002	3300010360	Tropical Forest Soil	MRSIPTEFAGIPVWLMLFAAAGFLLFFFKIAGNPAEREELTRFRLFFLIATILFAIAGIADFVIWASPPS*
Ga0126372_121744531	3300010360	Tropical Forest Soil	TLMHSFPTELAGIPVWLLLFAAAGFLLFFFKIAGNPNDREELSKLRLFLLIATILLALAGIADFVLWATPSS*
Ga0126377_104549612	3300010362	Tropical Forest Soil	MRSIPTELAGIPVWLILFAVAGFLLFFFKVVHNPSEDEQLSKLRLFLLIASIFFAIAGVADFVIWASPS*
Ga0126377_109062762	3300010362	Tropical Forest Soil	MRSIPTEFAGIPVWLILFAVAGLLLFFFKIAGNPAEREELTRFRLFFLIATILFAIAGIADFVIWASPPS*
Ga0126377_109717852	3300010362	Tropical Forest Soil	MQSIPTELAGVPVWLILFAAAGFLLFFFKIAGNPAEREQLTRLRLFFLIATILYAIAGIADFVIWASPPS*
Ga0126377_126032782	3300010362	Tropical Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPSEKEGLSKLRLFFLVATILFAIAGIADFVIWASPSS*
Ga0126377_126842662	3300010362	Tropical Forest Soil	MRALPTEFAGIPVWLLLFVGAGFLLFFFKIAGNPSEREELSKLRLFFLIAAILFAIAGIADFVIWASPAS*
Ga0126379_100046438	3300010366	Tropical Forest Soil	MRSIPTEIAGIPVWLVLFAIAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIADFVIWASPSS*
Ga0126379_116359812	3300010366	Tropical Forest Soil	MRSIPTELAGVPVWLMLFVVAGFLLFFFKIAGHPSQREELTKLRLFFLIATILFAIAGIADFVIWATPSS*
Ga0126379_125982492	3300010366	Tropical Forest Soil	TELAGIPVWLLLFVAAGFLLFFFKIAGNPSQQEELSRPRLFFLIAAILFAIAGIVDFVVWASPSS*
Ga0126379_132263641	3300010366	Tropical Forest Soil	VRSIPSEVVGIPVWLILFAVAGFLLFFFKIAHNPAEREELSKLRLFFLIAAILFAIAGIADFVIWASPPA*
Ga0126381_1004210794	3300010376	Tropical Forest Soil	MRSIPTELAGIPVWLVLFAIAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIADFVIWASPSS*
Ga0126383_106288342	3300010398	Tropical Forest Soil	MRSIPTEFAGIPVWLMLFAVAGFLLFFFKIAGNPAEREELTRLRLFFLIATILFAIAGIADFVIWASPLS*
Ga0137363_114803441	3300012202	Vadose Zone Soil	YQTVRSVPTEFAGIPVWLILFIVAGFLLFLFKVAGNPQDRPQNSEELSKLRVFFLIATLLFAVAGVADFIVWATPQ*
Ga0137362_103804222	3300012205	Vadose Zone Soil	VRSVPTEFAGIPVWLILFIAAGFLLFLFKVAGNPQDRPQNSEELSKLRVFFLIATLLFAVAGVADFIVWATPQ*
Ga0137378_110765091	3300012210	Vadose Zone Soil	VRLSIPTEFFGIPVWLILFVVAGFLLFLFKVAGNPQDRPHNSEELSRLRIFFLIATLLFAVAGIADFIVWVSPQ*
Ga0137359_100346874	3300012923	Vadose Zone Soil	VWSVPTEFAGIPVWLILFIVAGFLLFLFKVAGNPQDRPQNSEELSKLRVFFLIATLLFAVAGVADFIVWATPQ*
Ga0126375_100158673	3300012948	Tropical Forest Soil	MHSIPTELAGIPVWLLLFFVAGFLLFLFKIAGSPRERGELSKLRLFFLIATILCAVAGIADFVIWANPSS*
Ga0164303_114765512	3300012957	Soil	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGRPNDREELSKLRLFFLIATVLFALAGIADFVLWASPSS*
Ga0126369_106222192	3300012971	Tropical Forest Soil	MRSIPTELSGIPVWLILFAAAGFLLFFFKIAGNPAEREQLSKLRLFFLIATILFAIAGVADFVIWASPSS*
Ga0126369_110164462	3300012971	Tropical Forest Soil	MRSIPIELAGVPVWLLLFAAAGFLLFFFKIAGNPTERERLSKLRLFFLIAAILVAIAGVADFVIWASPSS*
Ga0163162_127109541	3300013306	Switchgrass Rhizosphere	MRSIPTELAGIPVWLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIGASPSS*
Ga0157379_107763032	3300014968	Switchgrass Rhizosphere	MRSIPAELAGIPVWLLLFVAAGFLLFFFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0137403_101639293	3300015264	Vadose Zone Soil	VRSVPTEFAGIPVWLILFIVAGFLLFLFKVAGNPQDRPQNSEELSKLRVFFLIATLLFAVAGVADFIVWATPQ*
Ga0132258_102839752	3300015371	Arabidopsis Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWTSPSS*
Ga0132256_1009766502	3300015372	Arabidopsis Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREVLSKLRLFFLIATILFALAGIADFVLWASPSS*
Ga0132255_1003201382	3300015374	Arabidopsis Rhizosphere	MPSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPHDREELSKLRLFFLIATILFALAGIADFVLWATPSS*
Ga0182033_101490891	3300016319	Soil	VWIMLFAVAGFLLFFFKIAGNPVEREELTRLRLFFLIATILFAIAGIADFVIWASPLS
Ga0210407_100103102	3300020579	Soil	VRLSIPTEFAGIPVWLILFTIAGFMLFLFKVAGNPQDRPQNSEEISSLRIFFLIATLLFAAAGIADFVVWATPR
Ga0210406_1000425010	3300021168	Soil	VRLSIPTEFAGIPVWLILFTIAGFMLFLFKVAGNPQDRPQNSEEISSLRIFFLIATLLFAVAGIADFVVWATPR
Ga0126371_113324722	3300021560	Tropical Forest Soil	VRSIPSELVGIPVWLILFAVAGFLLFFFKIAHNPAEREELSRLRLFFLIAAILFAIAGIADFVIWASPPA
Ga0247664_10168932	3300024232	Soil	MPTELAGVPIWLLLFVAAGFLLFFFKIAGGGAENREDLSKLRIFFLIATILFAIAGIADFVIWARPSS
Ga0247670_10395801	3300024283	Soil	MRSIPTELAGVPVWLLLFVIAGFLLFFFKIAGNPSQNEELSKLRLFFLIASILLAIAGIADFFIWAMPSS
Ga0247668_10804922	3300024331	Soil	MRSIPTELAGIPVWLMLFVAAGFLLFFFKIAGNPNEREELSKLRLFFLVATILFALAGIADFVLWASPSS
Ga0207671_107154062	3300025914	Corn Rhizosphere	WLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPSS
Ga0207663_107664512	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TELAGIPVWLLLFVAAGFLLFFFKIAGNPHDREELSKLRLFFLIATILFALAGIADFVLWATPSS
Ga0207694_105610492	3300025924	Corn Rhizosphere	MRSIPTELAGIPVWLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPSS
Ga0207686_110391752	3300025934	Miscanthus Rhizosphere	MRSIPAELAGVPVWLLLFLIAGFLLFFFKIAGNPSENEELSKLRLFFLIASILLAIAGIADFVLWATPSS
Ga0207665_100154112	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPDDREEFSKLRLFFLIATILFALAGIADFVLWATPAS
Ga0207712_103860271	3300025961	Switchgrass Rhizosphere	MRSIPTELAGVPVWLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPSS
Ga0209647_12690141	3300026319	Grasslands Soil	AGIPVWLILFIVAGFLLFLFKVAGNPQDRPQNSEELSKLRVFFLIATLLFAVAGVADFIVWATPQ
Ga0209131_13897641	3300026320	Grasslands Soil	VPTEFAGIPVWLILFIVAGFLLFLFKVAGNPQDRPQNSEELSKLRVFFLIATLLFAVAGVADFIVWATPQ
Ga0257160_10003253	3300026489	Soil	VRSIPTEFAGIPVWLILFIVAGFLLFLFKVAGNPQDRPQNSEELSKVRIFFVIATLLFAAAGIADFIVWARPQ
Ga0209418_10806401	3300027371	Forest Soil	MRSIPTELAGIPVWLILFTIAGFMLFLFKVAGNPQDRPQNSEEISSLRIFFLIATLLFAVAGIADFVVWATPR
Ga0209004_10009012	3300027376	Forest Soil	MPRAIPTEFAGIPVWLILFIVAGFLLFLFKVAGNPRHRPQNREELSSLRIFFLIATVLFAVAGIADFMVWAGPQ
Ga0209465_100008515	3300027874	Tropical Forest Soil	MRSIPTEIAGIPVWLVLFAIAGFLLFFFKVAHNPSEREELSKLRLFILIATILFAIAGIADFVIWASPSS
Ga0268264_106344811	3300028381	Switchgrass Rhizosphere	IPTELAGIPVWLLLFVAAGFLLFFFKIAGNPSEDEKLSTLRLFLLIATILFALAGIADFVLWATPST
Ga0268264_115839882	3300028381	Switchgrass Rhizosphere	YQFAEENMRSIPTELAGIPVWLILFAIAGFLLFLFKVAGNPSEREELSKLRLFFLIATILFAIAGIADFVIWASPSS
Ga0170834_1069983866	3300031057	Forest Soil	VRSIPTEFASIPVWLILFIVAGFLLFLFKIAGNPQDRPQNSEELSKVRIFFLSATLLFAAAGIADFIVWARPQ
Ga0170824_1155121371	3300031231	Forest Soil	VRSIPTEFASIPVWLILFIVAGFLLFLFKIAGNPQDRPQNSEELSKVRIFFLIATLLFAAAGIADFIVWARPQ
Ga0318534_104924052	3300031544	Soil	MRSIPTEFAGIPVWLMLFAVAGFLLFFFKIAGNPAEREELTRLRLFFLIATILFAIAGIADFVIWASPLS
Ga0318561_101348831	3300031679	Soil	MRSIPTEFAGIPVWLMLFAVAGFLLFFFKIAGNPAEREELTRLRLFFLIATILFAIAG
Ga0307469_119155301	3300031720	Hardwood Forest Soil	LHSVRLMRSAIPTELAGIPVWLVLFVAAGFLLFFFKIAGNPSQDEKLSTLRLFLLIATILFALAGIADFVIWVNPSP
Ga0318493_107920631	3300031723	Soil	MRSIPTEFAGIPVWLMLFAVAGFLLFFFKIAGNPAEREELTRLRLFFLIATILFAIAGIADFVIWA
Ga0307475_102088263	3300031754	Hardwood Forest Soil	MHLSIPTEFVGIPVWLILLIVAGFLLFLFKVAGNPQDRPQNDEELSKLRVFFLIATLLFAAAGIADFVVWASPQ
Ga0318546_107416931	3300031771	Soil	NKSMRSIPTEFAGIPVWLMLFAVAGFLLFFFKIAGNPAEREELTRLRLFFLIATILFAIAGIADFVIWASPLS
Ga0307473_101405302	3300031820	Hardwood Forest Soil	MRSIPTELAGIPVWLLLFAAAGFLLFLFKIAGRPNDREELSKLRLFFLIATVLFALAGIADFVLWAAPSS
Ga0307479_100517733	3300031962	Hardwood Forest Soil	MPRVVPIEFAGIPVWLILFIVAGFLLFLFKIAGNPQNRPQNGEELSRLRVFFLIATLLFAVAGIADFVVWAKPW
Ga0307479_121840072	3300031962	Hardwood Forest Soil	MPRVVPTEFAGIPVWLILFIVAGFLLFLFKIAGNPQNRPQNGEELSRLRVFFLIATLLFAVAGIADFVVWAKPW
Ga0318540_104502241	3300032094	Soil	AGIPVWLMLFAVAGFLLFFFKIAGNPAEREELTRLRLFFLIATILFAIAGIADFVIWASPLS
Ga0307470_113332791	3300032174	Hardwood Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFFFKIAGNPDDREELSKLRLFFLIATILFALAGIADFVLWATPSS
Ga0307471_1000332754	3300032180	Hardwood Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGSPNDREELSKLRLFFLIATILFALAGIADFVLWATPSS
Ga0307471_1006025412	3300032180	Hardwood Forest Soil	MRSIPTELAGVPVWLLLFVIAGFLLFFFKIAGNPSQNEELSKLRLFFLIASILLAIAGIADFFIWAKPSS
Ga0307471_1012021841	3300032180	Hardwood Forest Soil	VRLSIPTEFAGIPVWLILFIVAGFLLFFFKVAGNPQNREELSKLRVFFLIATLLFAVAGIADFIVWAKPR
Ga0307471_1040615542	3300032180	Hardwood Forest Soil	ACSSRCYAPTLSSMPRVVPTEFVGIPVWLILFIVAGFLLFLFKVAGNPQDLPQNGEELSKLRIFFLIATLLFAAAGIADFVVWATPSP
Ga0307472_1002324132	3300032205	Hardwood Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFLFKIAGRPNDREELSKLRLFFLIATVLFALAGIADFVLWASPSS
Ga0307472_1011765232	3300032205	Hardwood Forest Soil	MRSIPTELAGIPVWLLLFVAAGFLLFFFKVAGNPNDHEELSKLRLFFLIATILFALAGIADFVLWATPSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073944

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences