Metagenome / Metatranscriptome Family F073968

Basic Information
Family ID	F073968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	72 residues
Representative Sequence	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSH
Number of Associated Samples	97
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.91 %
% of genes near scaffold ends (potentially truncated)	29.17 %
% of genes from short scaffolds (< 2000 bps)	88.33 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (65.833 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.000 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.04% β-sheet: 24.64% Coil/Unstructured: 62.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05494	MlaC	3.33
PF08327	AHSA1	2.50
PF07690	MFS_1	2.50
PF13676	TIR_2	1.67
PF01557	FAA_hydrolase	0.83
PF01979	Amidohydro_1	0.83
PF00400	WD40	0.83
PF01042	Ribonuc_L-PSP	0.83
PF01738	DLH	0.83
PF04261	Dyp_perox	0.83
PF00535	Glycos_transf_2	0.83
PF02705	K_trans	0.83
PF09929	DUF2161	0.83
PF00211	Guanylate_cyc	0.83
PF01381	HTH_3	0.83
PF13632	Glyco_trans_2_3	0.83
PF13417	GST_N_3	0.83
PF01134	GIDA	0.83
PF03928	HbpS-like	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	3.33
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.83
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.83
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.83
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
All Organisms	root	All Organisms	34.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
cellular organisms	root	All Organisms → cellular organisms	34.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.33 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	1.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	1.67 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Ignavibacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	1.67 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
unclassified Ignavibacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales	1.67 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Ignavibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium	1.67 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	0.83 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101153174	Not Available	630	Open in IMG/M
3300002245\|JGIcombinedJ26739_100280916	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300002914\|JGI25617J43924_10084736	Not Available	1147	Open in IMG/M
3300003505\|JGIcombinedJ51221_10367851	Not Available	584	Open in IMG/M
3300004633\|Ga0066395_10832525	Not Available	555	Open in IMG/M
3300005332\|Ga0066388_101424458	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300005332\|Ga0066388_101724676	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005434\|Ga0070709_10626562	Not Available	830	Open in IMG/M
3300005434\|Ga0070709_11078647	Not Available	642	Open in IMG/M
3300005436\|Ga0070713_100819818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300005437\|Ga0070710_10120878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1585	Open in IMG/M
3300005437\|Ga0070710_10397854	Not Available	922	Open in IMG/M
3300005437\|Ga0070710_11539253	Not Available	501	Open in IMG/M
3300005546\|Ga0070696_101187645	Not Available	644	Open in IMG/M
3300005602\|Ga0070762_10580435	Not Available	743	Open in IMG/M
3300005610\|Ga0070763_10102968	Not Available	1442	Open in IMG/M
3300005610\|Ga0070763_10643133	Not Available	617	Open in IMG/M
3300005921\|Ga0070766_10304805	Not Available	1024	Open in IMG/M
3300005921\|Ga0070766_11263065	Not Available	512	Open in IMG/M
3300006050\|Ga0075028_100679729	Not Available	618	Open in IMG/M
3300006172\|Ga0075018_10449804	Not Available	663	Open in IMG/M
3300006175\|Ga0070712_100871307	Not Available	775	Open in IMG/M
3300006755\|Ga0079222_11250399	Not Available	671	Open in IMG/M
3300006854\|Ga0075425_101488358	Not Available	765	Open in IMG/M
3300006871\|Ga0075434_100791111	Not Available	965	Open in IMG/M
3300006904\|Ga0075424_100380386	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300009148\|Ga0105243_11782121	Not Available	646	Open in IMG/M
3300009162\|Ga0075423_12710239	Not Available	542	Open in IMG/M
3300009792\|Ga0126374_10742909	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010047\|Ga0126382_10035982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2770	Open in IMG/M
3300010048\|Ga0126373_10048657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3760	Open in IMG/M
3300010048\|Ga0126373_10067816	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300010358\|Ga0126370_10055799	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300010359\|Ga0126376_10368628	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300010361\|Ga0126378_11541022	Not Available	754	Open in IMG/M
3300010376\|Ga0126381_100129875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3276	Open in IMG/M
3300010376\|Ga0126381_101756845	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300010397\|Ga0134124_10628747	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300010398\|Ga0126383_10387130	Not Available	1431	Open in IMG/M
3300010400\|Ga0134122_12493806	Not Available	566	Open in IMG/M
3300012198\|Ga0137364_10267529	Not Available	1265	Open in IMG/M
3300012582\|Ga0137358_10478374	Not Available	840	Open in IMG/M
3300012924\|Ga0137413_10462986	Not Available	925	Open in IMG/M
3300012924\|Ga0137413_11797239	Not Available	506	Open in IMG/M
3300012951\|Ga0164300_11035691	Not Available	531	Open in IMG/M
3300012957\|Ga0164303_11250704	Not Available	546	Open in IMG/M
3300012960\|Ga0164301_11239791	Not Available	601	Open in IMG/M
3300012961\|Ga0164302_10667342	Not Available	765	Open in IMG/M
3300012986\|Ga0164304_11528354	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300015241\|Ga0137418_10086755	All Organisms → cellular organisms → Bacteria	2831	Open in IMG/M
3300016294\|Ga0182041_10665895	Not Available	920	Open in IMG/M
3300020199\|Ga0179592_10506716	Not Available	516	Open in IMG/M
3300020579\|Ga0210407_10156501	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300020579\|Ga0210407_11058390	Not Available	616	Open in IMG/M
3300020580\|Ga0210403_10038186	All Organisms → cellular organisms → Bacteria	3837	Open in IMG/M
3300020580\|Ga0210403_10079717	All Organisms → cellular organisms → Bacteria → Proteobacteria	2637	Open in IMG/M
3300020580\|Ga0210403_10470658	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300020581\|Ga0210399_10159138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	1869	Open in IMG/M
3300020581\|Ga0210399_10290712	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300020582\|Ga0210395_10448561	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium	971	Open in IMG/M
3300020583\|Ga0210401_10647866	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300020583\|Ga0210401_11378705	Not Available	562	Open in IMG/M
3300021170\|Ga0210400_11006161	Not Available	677	Open in IMG/M
3300021171\|Ga0210405_11023454	Not Available	621	Open in IMG/M
3300021180\|Ga0210396_11237885	Not Available	623	Open in IMG/M
3300021181\|Ga0210388_10094353	All Organisms → cellular organisms → Bacteria	2555	Open in IMG/M
3300021181\|Ga0210388_10451114	Not Available	1130	Open in IMG/M
3300021315\|Ga0179958_1071567	Not Available	537	Open in IMG/M
3300021401\|Ga0210393_10385411	All Organisms → cellular organisms → Bacteria → Proteobacteria	1142	Open in IMG/M
3300021401\|Ga0210393_10483240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300021401\|Ga0210393_11204789	Not Available	609	Open in IMG/M
3300021407\|Ga0210383_10519191	Not Available	1028	Open in IMG/M
3300021420\|Ga0210394_10030658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4841	Open in IMG/M
3300021432\|Ga0210384_10786492	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300021475\|Ga0210392_10358088	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium	1057	Open in IMG/M
3300021478\|Ga0210402_10917315	Not Available	802	Open in IMG/M
3300021479\|Ga0210410_10347658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1329	Open in IMG/M
3300021559\|Ga0210409_11577942	Not Available	532	Open in IMG/M
3300021559\|Ga0210409_11705292	Not Available	506	Open in IMG/M
3300021560\|Ga0126371_10068912	All Organisms → cellular organisms → Bacteria → Proteobacteria	3435	Open in IMG/M
3300022511\|Ga0242651_1046401	Not Available	528	Open in IMG/M
3300022525\|Ga0242656_1036226	Not Available	810	Open in IMG/M
3300022528\|Ga0242669_1106977	Not Available	548	Open in IMG/M
3300022528\|Ga0242669_1136489	Not Available	504	Open in IMG/M
3300022529\|Ga0242668_1061015	Not Available	695	Open in IMG/M
3300022532\|Ga0242655_10233163	Not Available	576	Open in IMG/M
3300022709\|Ga0222756_1026224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300022712\|Ga0242653_1051101	Not Available	672	Open in IMG/M
3300022713\|Ga0242677_1074540	Not Available	538	Open in IMG/M
3300022715\|Ga0242678_1069552	Not Available	543	Open in IMG/M
3300022717\|Ga0242661_1027267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300022720\|Ga0242672_1104233	Not Available	560	Open in IMG/M
3300025905\|Ga0207685_10582195	Not Available	599	Open in IMG/M
3300025915\|Ga0207693_10804854	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300025915\|Ga0207693_11101472	Not Available	603	Open in IMG/M
3300025928\|Ga0207700_10072972	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300026345\|Ga0257148_1015045	Not Available	612	Open in IMG/M
3300026494\|Ga0257159_1031839	Not Available	879	Open in IMG/M
3300026551\|Ga0209648_10139126	All Organisms → cellular organisms → Bacteria → Proteobacteria	1933	Open in IMG/M
3300026998\|Ga0208369_1027716	Not Available	558	Open in IMG/M
3300027174\|Ga0207948_1012031	Not Available	999	Open in IMG/M
3300027174\|Ga0207948_1026054	Not Available	696	Open in IMG/M
3300027537\|Ga0209419_1004140	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300027605\|Ga0209329_1058507	Not Available	826	Open in IMG/M
3300027635\|Ga0209625_1036674	Not Available	1094	Open in IMG/M
3300028906\|Ga0308309_10701478	Not Available	879	Open in IMG/M
3300029636\|Ga0222749_10312747	Not Available	815	Open in IMG/M
3300031128\|Ga0170823_12398512	Not Available	617	Open in IMG/M
3300031128\|Ga0170823_16067358	Not Available	869	Open in IMG/M
3300031231\|Ga0170824_108964514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1536	Open in IMG/M
3300031446\|Ga0170820_10418467	Not Available	800	Open in IMG/M
3300031474\|Ga0170818_109511041	Not Available	866	Open in IMG/M
3300031715\|Ga0307476_10738324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300031718\|Ga0307474_11026452	Not Available	653	Open in IMG/M
3300031754\|Ga0307475_10828008	Not Available	733	Open in IMG/M
3300031962\|Ga0307479_11948942	Not Available	537	Open in IMG/M
3300032180\|Ga0307471_100912488	Not Available	1046	Open in IMG/M
3300032180\|Ga0307471_103476739	Not Available	558	Open in IMG/M
3300032205\|Ga0307472_101160744	Not Available	735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.83%
Host-Associated	Host-Associated	4.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.17%
Plants	Host-Associated → Plants	4.17%
Aquatic	Environmental → Aquatic	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.17%
Sediment	Environmental → Aquatic → Sediment	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.00%
Loam	Environmental → Terrestrial → Soil → Loam	24.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1011531742	3300000364	Soil	FEICPSKAGGCLIIVTWPKGPEQQVDGFTTVEAAQAWIENDAPSWIAESIYSTIQIEVLDD*
JGIcombinedJ26739_1002809162	3300002245	Forest Soil	MATVKYQPTFEILPSEGGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPTWIAGSLYSN*
JGI25617J43924_100847362	3300002914	Grasslands Soil	VELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
JGIcombinedJ51221_103678512	3300003505	Forest Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGS
Ga0066395_108325251	3300004633	Tropical Forest Soil	RRAALGACLVEEVVELATVKYRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV*
Ga0066388_1014244581	3300005332	Tropical Forest Soil	VFAPLDHGFVPDPDDMMFSGRRAALGACLVEEVVELATVKYRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV*
Ga0066388_1017246762	3300005332	Tropical Forest Soil	MEAGAEVGMGIVKHRPTFEILPSKADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSAYSR*
Ga0070709_106265621	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEAGEEVGMAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR*
Ga0070709_110786472	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VELATIKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0070713_1008198182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIGKVVKMATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL*
Ga0070710_101208781	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	KYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0070710_103978542	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKAGEEVGMAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR*
Ga0070710_115392531	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIGKVVKMATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGP
Ga0070696_1011876451	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VELATIKYRPTFEICPSNARGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0070762_105804352	3300005602	Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL*
Ga0070763_101029683	3300005610	Soil	VIFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0070763_106431332	3300005610	Soil	MAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSSYSG*
Ga0070766_103048052	3300005921	Soil	MFKPRKVVELATVKHRPTFEICPSKAGGCLIVVIWPKGPEQHLDGFSSAEAAQRWIENEAPSWIARSIYSTIHIEVLDD*
Ga0070766_112630652	3300005921	Soil	MIGIVVKMATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL*
Ga0075028_1006797291	3300006050	Watersheds	VVIFKPRKVVELATVKHRPTFEICPSKDGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0075018_104498042	3300006172	Watersheds	ICPSNAGGCLIVAIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0070712_1008713072	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVIVKHRPTFEILPSKADGYLVVVTWPKGPEQQLDGFASAEAAQVWIENDGPSWIAGSPYSH*
Ga0079222_112503992	3300006755	Agricultural Soil	VELATIKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSAIQIEVLDD*
Ga0075425_1014883582	3300006854	Populus Rhizosphere	VELATVKYRPTFEICPSNAGGCLIVVIWPQGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0075434_1007911112	3300006871	Populus Rhizosphere	MGTGAQASVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIADSLYSH*
Ga0075424_1003803863	3300006904	Populus Rhizosphere	MFKPRKVVELATVKYRPPFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0105243_117821211	3300009148	Miscanthus Rhizosphere	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSH*
Ga0075423_127102391	3300009162	Populus Rhizosphere	MFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0126374_107429091	3300009792	Tropical Forest Soil	MEAGAEVGMGIVKHRPTFEILPSKADGYLIVVTWPKGPEQQLDGFASAGAARAWLDKDGPSWIAGSAYSR*
Ga0126382_100359826	3300010047	Tropical Forest Soil	MEAGAEVGMGIVKHRPTFEIFPSKADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSSYSR*
Ga0126373_100486572	3300010048	Tropical Forest Soil	VELATVKYRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV*
Ga0126373_100678161	3300010048	Tropical Forest Soil	ACLVEEVVELATVKHRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSIIEVEV*
Ga0126370_100557994	3300010358	Tropical Forest Soil	MMFSGRRAALGACLVEEVVELATVKYRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV*
Ga0126376_103686282	3300010359	Tropical Forest Soil	VFAPLDHGFVPDPDEMMFSGRRAALGACLVEEVVELATVKYRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV*
Ga0126378_115410222	3300010361	Tropical Forest Soil	EAGAEVGMGIVKHRPTFEILPSKADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSAYSR*
Ga0126381_1001298751	3300010376	Tropical Forest Soil	RPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV*
Ga0126381_1017568452	3300010376	Tropical Forest Soil	MEARAEVGMGIVKHRPTFEILPSKADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSAYSR*
Ga0134124_106287471	3300010397	Terrestrial Soil	VIFKPRKVVELATIKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0126383_103871302	3300010398	Tropical Forest Soil	MEAGAEVGMGIVKHRPTFEILPSKADGYLIVVTWPKGLEQQLDGFASAEAARAWLDKDGQAG*
Ga0134122_124938062	3300010400	Terrestrial Soil	VIFEPRKVVELATVKYRPTFEICPSNADGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0137364_102675293	3300012198	Vadose Zone Soil	MFKPRKVVKLATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0137358_104783741	3300012582	Vadose Zone Soil	MKAGEEVGMAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSSYSR*
Ga0137413_104629862	3300012924	Vadose Zone Soil	MKAGEEVGMAIVKHRPTFEILPSEADGYLIVGTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR*
Ga0137413_117972391	3300012924	Vadose Zone Soil	FKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD*
Ga0164300_110356911	3300012951	Soil	MIGDVAKMAALKHPPTFEILPSEAGGCLVVVIWPRGPEQQLDGFANAEAAQAWIENYGPSWIAGNPLLAHTIPPAGCC*
Ga0164303_112507041	3300012957	Soil	MIGDVANMAALKHPPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSH*
Ga0164301_112397912	3300012960	Soil	VIFKPRKVVELATIKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSIIQIEVQDD*
Ga0164302_106673421	3300012961	Soil	VIFKPRKVVELATIKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPTWIAESIYSTIQIEVLDD*
Ga0164304_115283542	3300012986	Soil	MKAGEEVGMAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWI
Ga0137418_100867552	3300015241	Vadose Zone Soil	MEVGAEVGMAIVKHRPTFEILPSEADDYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR*
Ga0182041_106658952	3300016294	Soil	VELATVKLRPSFEICASKTGGYLIVVTWPKGPEQELDGFATVEAAQAWIENDAPGWITESIYSTIRVELHA
Ga0179592_105067161	3300020199	Vadose Zone Soil	VGKKLEMVIVKHRPTFEILPSKADGYLVVVTWPKGPEQQLDGFASAEAAQVWIENDGPSWIAGSPYSH
Ga0210407_101565012	3300020579	Soil	VELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0210407_110583901	3300020579	Soil	MKAGEEVGMAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR
Ga0210403_100381863	3300020580	Soil	VELAAVKHRPTFEICPSKAGGCLIIVTWPKGPEQQVDGFATVEAAQAWIENDAPGWIAESIYSTIEVEV
Ga0210403_100797173	3300020580	Soil	MATVKYQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0210403_104706582	3300020580	Soil	VIFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0210399_101591381	3300020581	Soil	MATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0210399_102907123	3300020581	Soil	LIEEVVELAAVKHRPTFEICPSKAGGCLIIVTWPKGPEQQVDGFATVEAAQAWIENDAPGWIAESIYSTIEVEV
Ga0210395_104485611	3300020582	Soil	MIGEVVKMATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSH
Ga0210401_106478663	3300020583	Soil	VIFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDDD
Ga0210401_113787051	3300020583	Soil	GRAKDVRAPIWIGTGAQAPVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0210400_110061612	3300021170	Soil	MATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAG
Ga0210405_110234541	3300021171	Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIEDDGPSWIAGSLLAL
Ga0210396_112378851	3300021180	Soil	APVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0210388_100943531	3300021181	Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLA
Ga0210388_104511143	3300021181	Soil	VELATVKYRPTFEICPSNTGGCLIVVIWPEGPEQQLDGFSSVEVALGWIENDAPSWIAESIYSTIQIEVLDD
Ga0179958_10715672	3300021315	Vadose Zone Soil	KKLEMVIVKHRPTFEILPSKADGYLVVVTWPKGPEQQLDGFASAEAAQVWIENDGPSWIAGSPYSH
Ga0210393_103854111	3300021401	Soil	VELATVKYRPTFEICPSNTGGCLIVVIWPEGPEQQLDGFSSVEVALGWIENDAPSWIAESIYST
Ga0210393_104832402	3300021401	Soil	VELATVKYRPTFEICPSNARGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDDD
Ga0210393_112047891	3300021401	Soil	RKVVELATVKYRPTFEICPSNTGGCLIVVIWPEGPEQQLDGFSSVEVALGWIENDAPSWIAESIYSTIQIEVLDD
Ga0210386_115387631	3300021406	Soil	QHVPGRAKDVWAPIWIGTGAQAPVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0210383_105191912	3300021407	Soil	VELVTVKHRPTFEICPSKAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAR
Ga0210394_100306584	3300021420	Soil	MEAGAEVGMAIVKHRPTFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDKDGPSWIAGSSYSG
Ga0210384_107864921	3300021432	Soil	MATVKYQPTFEILPSEGGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSP
Ga0210392_103580882	3300021475	Soil	APVRRMIGEVVKMATVKHQPTFEILPSEAGGSLVVVIWPKGPEQQLDGFASAEAAQAWIGNDGPSWIAGSLYSH
Ga0210402_109173151	3300021478	Soil	MATVKYQPTFEILPSEGGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPTWIAGSLYSN
Ga0210410_103476581	3300021479	Soil	VIFKPRKVVELATVKYRPTFEICPSNARGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPGWIAESIYSTIQIEVLDDD
Ga0210409_115779421	3300021559	Soil	VELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIA
Ga0210409_117052921	3300021559	Soil	SRAPVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0126371_100689123	3300021560	Tropical Forest Soil	VFAPLDHGFVPDPDDMMFSGRRAALGACLVEEVVELATVKYRPTFEICPSKASGYLIVVTWPKGPEQQLDGFVTVEAAQAWIDNDAPGWIAESIYSTIEIEV
Ga0242651_10464011	3300022511	Soil	WIGTGAQAPVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0242656_10362261	3300022525	Soil	MIGKVLKMATVKHQPTFEIRPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0242669_11069771	3300022528	Soil	APVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIEDDGPSWIAGSLLAL
Ga0242669_11364891	3300022528	Soil	VELATVKYRPTFEICPSNTGGCLIVVIWPEGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0242668_10610151	3300022529	Soil	VELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEVALGWIENDAPSWIAESIYSTIQIEVLDDD
Ga0242655_102331631	3300022532	Soil	MNGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0222756_10262242	3300022709	Soil	MIGKVVKMATVKHQPTFGILPSEVGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0242653_10511012	3300022712	Soil	IGTGAQAPVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0242677_10745402	3300022713	Soil	FKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0242678_10695522	3300022715	Soil	SIWIGTGAQATVRRMIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0242661_10272671	3300022717	Soil	KMATVKHQPTFEILPSEAGGCLVLLIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0242672_11042331	3300022720	Soil	MAIVKHRPTFEILPSEADCYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR
Ga0207685_105821951	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VELATIKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPTWIAESIYSTIQIEVLDD
Ga0207693_108048542	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VELATVKYRPTFEICPSNADGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0207693_111014721	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSH
Ga0207700_100729722	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIGKVVKMATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0257148_10150452	3300026345	Soil	MVIVKHRPTFEILPSKADGYLVVVTWPKGPEQQLDGFASAEAAQVWIENDGPSWIAGSPYSH
Ga0257159_10318391	3300026494	Soil	MKAGEEVGMAIVKHRPSFEILPSEADGYLIVVTWPKGPEQQLDGFASAEAARAWLDNDGPSWIAGSSYSR
Ga0209648_101391262	3300026551	Grasslands Soil	MFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0208369_10277162	3300026998	Forest Soil	VIFKPRKVVELTTVKYRPTFEICPSNAGGCLIVVIWPKGPEQHLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0207948_10120312	3300027174	Forest Soil	MFKPRKVVELATVKHRPTFEICPSKAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENHAPSWIAESIYSTIQIEVLDD
Ga0207948_10260542	3300027174	Forest Soil	MIGKVVKIATVKHQPTFEILPSEAGGCLVLVTWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0209419_10041401	3300027537	Forest Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIGNDGPSWIAGSLYSN
Ga0209329_10585071	3300027605	Forest Soil	VELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDRFSSVEAAQRWIENDAPSSIAESIYSTIQIEVLDV
Ga0209625_10366741	3300027635	Forest Soil	MIGEVVKMATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0308309_107014782	3300028906	Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVVVTWPNGPEQQFDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0222749_103127471	3300029636	Soil	MFGEVVKMTTVKHQPTFEILPSEAGGCLVVVIWPKGPEQQLDGFASVEAAQAWIENDGPSWIAGSLYSH
Ga0170823_123985122	3300031128	Forest Soil	MATVKHQPTFEILPSEAGGCLVVVIWPNGPEQQLDGFSSVEAAQAWIENDGPGFVADSPLEGAGFEL
Ga0170823_160673582	3300031128	Forest Soil	MFKPRKIVELATVKHRPTFEICPSKDGGCLIVVIWPKGPEQQLDGFSSVEVAQRWIENDAPNWIARSIYSTIHIEVLDD
Ga0170824_1089645142	3300031231	Forest Soil	VIFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEFLDD
Ga0170820_104184671	3300031446	Forest Soil	PTFEICPSKDGGCLIVVIWPKGPEQQLDGFSSVEVAQRWIENDAPNWIARSIYSTIHIEVLDD
Ga0170818_1095110412	3300031474	Forest Soil	VELATVKYRPTFEICPSNARGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0307476_107383241	3300031715	Hardwood Forest Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVLVIWPNGPEQQLDGFSSVEAARAWIENDGPSWIAGSLLAL
Ga0307474_110264522	3300031718	Hardwood Forest Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVLVTWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0307475_108280081	3300031754	Hardwood Forest Soil	MIGKVVKMATVKHQPTFEILPSEAGGCLVLLIWPNGPEQQLDGFSSVEAAQAWIENDGPSWIAGSLLAL
Ga0307479_119489422	3300031962	Hardwood Forest Soil	MFKPRKVVELATVKHRPTFEICPSKAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0307471_1009124881	3300032180	Hardwood Forest Soil	MIGKVVKMATVKHQPTFEIRPSEAGGCLVVVIWPNGPEQQLDGFSSVEAARAWIENDGPSWIAGSLLAL
Ga0307471_1034767391	3300032180	Hardwood Forest Soil	SLAVIFKPRKVVELATVKYRPTFEICPSNAGGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD
Ga0307472_1011607441	3300032205	Hardwood Forest Soil	VIFKPRKVVELATVKYRPTFEICPSNADGCLIVVIWPKGPEQQLDGFSSVEAAQRWIENDAPSWIAESIYSTIQIEVLDD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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