Metagenome Family F073996

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073996
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	81 residues
Representative Sequence	MNQKLFVVATLIILQASTSINAQQLNAPQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKVHARFQSPAAEPPF
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.50 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.62% β-sheet: 0.00% Coil/Unstructured: 37.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13620	CarboxypepD_reg	3.33
PF04199	Cyclase	1.67
PF08281	Sigma70_r4_2	1.67
PF12796	Ank_2	0.83
PF04255	DUF433	0.83
PF13561	adh_short_C2	0.83
PF13519	VWA_2	0.83
PF02371	Transposase_20	0.83
PF13583	Reprolysin_4	0.83
PF04545	Sigma70_r4	0.83
PF13462	Thioredoxin_4	0.83
PF01471	PG_binding_1	0.83
PF03681	Obsolete Pfam Family	0.83
PF01169	UPF0016	0.83
PF04542	Sigma70_r2	0.83
PF03734	YkuD	0.83
PF00753	Lactamase_B	0.83
PF12869	tRNA_anti-like	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	1.67
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG2119	Putative Ca2+/H+ antiporter, TMEM165/GDT1 family	General function prediction only [R]	0.83
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.83
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.33 %
Unclassified	root	N/A	20.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	63.33 %
Unclassified	root	N/A	20.00 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.67 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Unclassified	root	N/A	20.00 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Unclassified	root	N/A	20.00 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Unclassified	root	N/A	20.00 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.83 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.83 %
Chitinimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Unclassified	root	N/A	20.00 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.83 %
Chitinimonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas taiwanensis	0.83 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Unclassified	root	N/A	20.00 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.83 %
Lunatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Lunatimonas	0.83 %
Chitinimonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas taiwanensis	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Unclassified	root	N/A	20.00 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Lunatimonas lonarensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Lunatimonas → Lunatimonas lonarensis	0.83 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.83 %
Chitinimonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas taiwanensis	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_1783199	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1507372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300000891\|JGI10214J12806_11701682	Not Available	503	Open in IMG/M
3300000956\|JGI10216J12902_100111921	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300001904\|JGI24736J21556_1078550	Not Available	518	Open in IMG/M
3300004114\|Ga0062593_100266868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300004157\|Ga0062590_101550667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005093\|Ga0062594_100162979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1486	Open in IMG/M
3300005289\|Ga0065704_10375717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005293\|Ga0065715_10356956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300005293\|Ga0065715_10671087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005294\|Ga0065705_10427578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300005295\|Ga0065707_10151039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1658	Open in IMG/M
3300005334\|Ga0068869_101129146	Not Available	687	Open in IMG/M
3300005334\|Ga0068869_101667235	Not Available	569	Open in IMG/M
3300005337\|Ga0070682_101663374	Not Available	554	Open in IMG/M
3300005338\|Ga0068868_102048218	Not Available	544	Open in IMG/M
3300005341\|Ga0070691_10999679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005345\|Ga0070692_10023993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2994	Open in IMG/M
3300005345\|Ga0070692_11064323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005440\|Ga0070705_101092664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	652	Open in IMG/M
3300005441\|Ga0070700_100222979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300005444\|Ga0070694_100413615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300005444\|Ga0070694_100526888	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005457\|Ga0070662_101174495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Lunatimonas → Lunatimonas lonarensis	659	Open in IMG/M
3300005468\|Ga0070707_101545157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300005518\|Ga0070699_100316910	All Organisms → cellular organisms → Bacteria → Acidobacteria	1401	Open in IMG/M
3300005535\|Ga0070684_101861063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005539\|Ga0068853_102040840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005545\|Ga0070695_101826091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005549\|Ga0070704_102030523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005563\|Ga0068855_100269860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1892	Open in IMG/M
3300005577\|Ga0068857_102136430	Not Available	549	Open in IMG/M
3300005578\|Ga0068854_100827501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300005617\|Ga0068859_100717916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300005719\|Ga0068861_100571002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300005840\|Ga0068870_10332808	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005841\|Ga0068863_100474248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300005842\|Ga0068858_101031329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300005844\|Ga0068862_100724865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300005844\|Ga0068862_102099591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300005884\|Ga0075291_1061141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas taiwanensis	519	Open in IMG/M
3300006058\|Ga0075432_10219340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300006169\|Ga0082029_1433863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	515	Open in IMG/M
3300006169\|Ga0082029_1441904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1306	Open in IMG/M
3300006852\|Ga0075433_10963528	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006852\|Ga0075433_11405588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300006853\|Ga0075420_100322466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1338	Open in IMG/M
3300006871\|Ga0075434_101634769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300006871\|Ga0075434_102107852	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006904\|Ga0075424_102726537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300006954\|Ga0079219_10008222	Not Available	3355	Open in IMG/M
3300006969\|Ga0075419_10688537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300007004\|Ga0079218_10711173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300009093\|Ga0105240_12235762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300009098\|Ga0105245_12406191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009098\|Ga0105245_12802252	Not Available	540	Open in IMG/M
3300009147\|Ga0114129_12504326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300009162\|Ga0075423_13010733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300009174\|Ga0105241_10050587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3168	Open in IMG/M
3300009174\|Ga0105241_10501130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300009176\|Ga0105242_11895407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300009177\|Ga0105248_12358066	Not Available	606	Open in IMG/M
3300009177\|Ga0105248_13104814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010038\|Ga0126315_10040435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2483	Open in IMG/M
3300010046\|Ga0126384_12249269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010047\|Ga0126382_10789789	Not Available	808	Open in IMG/M
3300010358\|Ga0126370_10051483	All Organisms → cellular organisms → Bacteria	2620	Open in IMG/M
3300010362\|Ga0126377_11721993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300010373\|Ga0134128_11075506	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	888	Open in IMG/M
3300010373\|Ga0134128_12145673	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300010375\|Ga0105239_13476010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010396\|Ga0134126_12280059	Not Available	590	Open in IMG/M
3300010397\|Ga0134124_12307089	Not Available	579	Open in IMG/M
3300010399\|Ga0134127_11576951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300010399\|Ga0134127_13202105	Not Available	535	Open in IMG/M
3300010401\|Ga0134121_10883585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300011119\|Ga0105246_10104622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2067	Open in IMG/M
3300012200\|Ga0137382_10328140	Not Available	1071	Open in IMG/M
3300012923\|Ga0137359_10033360	All Organisms → cellular organisms → Bacteria	4430	Open in IMG/M
3300012923\|Ga0137359_10550442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1015	Open in IMG/M
3300012958\|Ga0164299_11149060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300013100\|Ga0157373_10400506	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300013296\|Ga0157374_11544733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300013306\|Ga0163162_12624832	Not Available	580	Open in IMG/M
3300013760\|Ga0120188_1003556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300014325\|Ga0163163_11597792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300014745\|Ga0157377_10323793	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300015373\|Ga0132257_102266967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300015373\|Ga0132257_103629731	Not Available	561	Open in IMG/M
3300015374\|Ga0132255_102317716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300017792\|Ga0163161_11467585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300018063\|Ga0184637_10766500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300018920\|Ga0190273_12126334	Not Available	525	Open in IMG/M
3300019377\|Ga0190264_11924527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300021344\|Ga0193719_10125716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300025900\|Ga0207710_10785037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300025908\|Ga0207643_11145614	Not Available	501	Open in IMG/M
3300025917\|Ga0207660_10696042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300025918\|Ga0207662_10101285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1785	Open in IMG/M
3300025922\|Ga0207646_11066080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300025927\|Ga0207687_11373286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300025932\|Ga0207690_10429412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300025933\|Ga0207706_11184311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300025942\|Ga0207689_10801445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300025942\|Ga0207689_11368919	Not Available	594	Open in IMG/M
3300025960\|Ga0207651_11315329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300025961\|Ga0207712_10751229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300026041\|Ga0207639_11720007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300026095\|Ga0207676_10685510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300026322\|Ga0209687_1244437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300026497\|Ga0257164_1032862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	786	Open in IMG/M
3300027903\|Ga0209488_10507196	Not Available	884	Open in IMG/M
3300028381\|Ga0268264_12433981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300028792\|Ga0307504_10410212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300031548\|Ga0307408_100360221	Not Available	1237	Open in IMG/M
3300031548\|Ga0307408_102426599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300031852\|Ga0307410_10523399	Not Available	979	Open in IMG/M
3300031995\|Ga0307409_101048005	Not Available	835	Open in IMG/M
3300032126\|Ga0307415_102110044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.00%
Environmental	Environmental	45.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.00%
Terrestrial	Environmental → Terrestrial	44.17%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.00%
Sediment	Environmental → Aquatic → Sediment	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.17%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0861.00002530	2162886011	Miscanthus Rhizosphere	MTKKLFIVATLLVLQASTFVFAQQPNASQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKG
ICChiseqgaiiDRAFT_15073722	3300000033	Soil	MKQKLFVVAAFTILLASTSIIAQQPNAPQRSYQQARRVLDDAIQAHGGLEALRAIKDFTLKEKGKLHARFQ
JGI10214J12806_117016821	3300000891	Soil	MKLKLFLVATLLILQTSISLMAQQTEASLRSYQQARRVLDDAIAAHGGLEALRAVKDFTLKEKGKLHSRYQSPA
JGI10216J12902_1001119213	3300000956	Soil	MMKLLVVATLLVLQASTSVVAQQPNASQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKIHARFQSPAA
JGI24736J21556_10785502	3300001904	Corn Rhizosphere	MKLKLFVVATLVTLLASAAASAQQLDASQRSYQQARRVLDDAITAHGGVEALREVKDFTLKEKGKLHARYQSPAAEPPFVVGAS
Ga0062593_1002668682	3300004114	Soil	MKPKLFVVASLILLQTSTAIVAQQANAPQRSYQQARRVLDDAIEAHGGLEAMRAIKDFT
Ga0062590_1015506672	3300004157	Soil	MHQKLFLIATIVLSTSITLMAQQPSASQRSYQQARRVLDDSIEAHGGLEALRAIKDFTLKEKGKVYARFQSPGAEPPFSAGNSEETLIVDTERGYVFD
Ga0062594_1001629791	3300005093	Soil	MNRKPFFAATLVLLLTAIPLVAQQSNASMRSYQQARRVLDDAIEAHGGVEALRAIKDFTLTEKGKLHARFQSPAAE
Ga0065704_103757171	3300005289	Switchgrass Rhizosphere	MKLKLFVVATLIALLASAVASAQQLDASQRSYQQARRVLDDAIAAHGGVEALRAVKDFTLKEKGKL
Ga0065715_103569561	3300005293	Miscanthus Rhizosphere	MHQRLFLIATLVLSTSITLVAQQPDAAQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKERGK
Ga0065715_106710871	3300005293	Miscanthus Rhizosphere	MHQRLFLIFSFVLSTAIALMGQQPSAPQRSYQQARRVLDDAIAAHGGVEALRSIKDFTLKEKGKVYARFQS
Ga0065705_104275782	3300005294	Switchgrass Rhizosphere	MKLKLFVVATLIALLASAVASAQQLDASQRSYQQARRVLDDAIAAHGGVEALRAVKDFTLKEKGKLHARYQ
Ga0065707_101510393	3300005295	Switchgrass Rhizosphere	MKLKLFVVATLILLQAATAIVAQQANAPQRSYQQARRVLDDAIEAHGGLEAMRAIKDFTLKEKGKLHARFQSPAAEP
Ga0068869_1011291462	3300005334	Miscanthus Rhizosphere	MKLKLFVVATLVVLQVSAAASAQQLDASQRSYKDARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPPYVVG
Ga0068869_1016672352	3300005334	Miscanthus Rhizosphere	MKLKLFVVATLILLQASVNARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKGFTLKE
Ga0070682_1016633741	3300005337	Corn Rhizosphere	MKLKLFVVATLVVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPPYLVGNSEE
Ga0068868_1020482181	3300005338	Miscanthus Rhizosphere	MKLKLFVVATLLMLHASSAVPAQQLDASQRSYQQARRVLDDAIQAHGGLEALRAVKDFTLKEKSMVYARYQSPAAEPPFAAGTSEETLIV
Ga0070691_109996791	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKLKLFVVATVIVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARFQSPAAEGPFVVGTSEETLIVDTDRGFVYDD
Ga0070692_100239931	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MHRKLFLLATLTLLQASTSIVAQQTNAPQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARFQSPTAELPYAVGTSEETLIVDMD
Ga0070692_110643231	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKLKLFVVATLILLQASANARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKDFTLKEKGKTYARYQSPAAEPPFAAGTSEETLIVDTERGFV
Ga0070705_1010926642	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRQKLLVVATLIILQAAASSNAQQPNAPQRSYQQARRVLDDAIAAHGGLAALRGIKDFTLKEKGKLYARFQSPTAEPPFAAGTSEE
Ga0070700_1002229792	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MHRKLFLLATLTLLQASTSIVAQQTNAPQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARFQSPTAELPYAIGTSEETL
Ga0070694_1004136151	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRLFLIATLFVLLASVAIVAQQPNASQRSYQQARRVLDDAIAAHGGLEALRAIKDFTLKEKGKIYA
Ga0070694_1005268882	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNRKLFFAATLLLLSAATTLIAQQPNASQRSYEQARRVLDEAIEAHGGVEALRAIKDFTLKEKGKLYARYQSPGAEPPYAVGT
Ga0070662_1011744951	3300005457	Corn Rhizosphere	MNRKLFFAASLVLLLTAIPLVAQQSNASMRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARFQSPAAEPPFSVGTSEETLIVDTERG
Ga0070707_1015451571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKLLIVATLLVLQASTSVFAQQPNASQRSYQQARRVLDDAIEANGGVEALRAIKDFTLKEKGKIYARFQSPASEPPFVAGTSEETLIVDTDRGFVFD
Ga0070699_1003169102	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKQKLFVVATLIILQASTSIVAQQTNAAQRSYQQARRVLDDAIAAHGGLEALRAIKDFTLKEKGKLHAR
Ga0070684_1018610632	3300005535	Corn Rhizosphere	MKLKLFVVATLLVLHAASAAPAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKVHARYQSP
Ga0068853_1020408401	3300005539	Corn Rhizosphere	MKLKLFVVATLILLQASVNARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKDFTLKEKGKTYARYQSPAAEPPFA
Ga0070695_1018260911	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKLFVVATLILLQASISIPSIIAQQPNAPQRSYQQARRVLDDAIAAHGGVEAMRAIKDFTLKEKGKLYAR
Ga0070704_1020305231	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKLKLFVVATLIVLHASSAVPAQQLDASQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKSKIYARYQSPAVEPPFAAGTSEETLIVDTER
Ga0068855_1002698601	3300005563	Corn Rhizosphere	MNRKLFFAASLVLLLTSTPLVAQQSTASMRSYQQARRVLDDAIEAHGGVEAMRAIKDFTLKEKGKLHARFQSPAAEPPFSVGTSEETLIVDTERG
Ga0068857_1021364301	3300005577	Corn Rhizosphere	MKLKLFVVATLLVLQVSAAAGAQQLDASQRSYKDARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSP
Ga0068854_1008275011	3300005578	Corn Rhizosphere	MHQRLFLIATLVLSTSITLMAQQPSAAQRSYQQARRVLDDAIEAHGGLEALRGIKDFTLKEKGKVYA
Ga0068859_1007179161	3300005617	Switchgrass Rhizosphere	MSQKLFLVVTLILLLSPTLVAQQLNAPLRSYQQARRVLDDAIAAHGGVEALRSIKDFTLKEKGKIHARFQSPAAEPPFVTGTSEETLIVDTERGLVFDDLKTA
Ga0068861_1005710022	3300005719	Switchgrass Rhizosphere	MKHKLSVVAALIVLQAAISLPSLVAQQSNAPYRSYQQARRVLDDAIAAHGGVAALREIKDFTLTEKGKLYARFQSPTAEEPFVVGTSEETLIVDT
Ga0068870_103328082	3300005840	Miscanthus Rhizosphere	MKLKLFVVATLIVLQASAAASAQQLDASQRSYKDARRVLDDAITAHGGVEALREVKDFTLKEKGKLHARYQSPAADPPYVVGTSEETLIVDTERGFVYDDL
Ga0068863_1004742481	3300005841	Switchgrass Rhizosphere	MKLKLFVVATLLMLHASSAVPAQQLDASQRSYQQARRVLDDAIQAHGGLEALRAVKDFTLKEKSKVYARYQSPAAEPPFAAGTSEETLIVDTERGFVF
Ga0068858_1010313292	3300005842	Switchgrass Rhizosphere	MKLKLFVVATLILLQASVNARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKDFTLKEKGKTYARYQSPAAEPPFAA
Ga0068862_1007248652	3300005844	Switchgrass Rhizosphere	MKQKLFVIAALILLQAPISIPSISAQQPNAPYRSYQQARRVLDDAIAAHGGVEALRAIKDFTLKEKGKLYARFQSPGAEPPFAVGTSEETLIVD
Ga0068862_1020995911	3300005844	Switchgrass Rhizosphere	MKLKLFVVATLILLQASANARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKDFTLKEKGKTYARYQSPAAEPPFA
Ga0075291_10611411	3300005884	Rice Paddy Soil	MKQRLFLIVTLVFSTSITLMAQQPSAPQRSYQQARRVLDDAIAAHGGVEALRAIKDFTLKEKGKVYARFQSPGADQISAGNSEETLV
Ga0075432_102193402	3300006058	Populus Rhizosphere	MKLKLFVIATLIVLHASSAVLAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGRVHARYQSPAAE
Ga0082029_14338631	3300006169	Termite Nest	MKLKLFVVATLIVLHASSAVLAQQLDASQRSYQQARRVLDAAIEAHGGLEALRAVKDFTLKEKSKVYARYQSPAAEGPFAAGTSEETL
Ga0082029_14419041	3300006169	Termite Nest	MKLKLFVVATLLTLLASAVASAQQPDASQRSYQQARRVLDDAITAHGGVEALRAVKDFTLKEKGKLHARYQSPAAEPPFVVGTSEETLIVD
Ga0075433_109635282	3300006852	Populus Rhizosphere	MKLRLFLIATLFVLLASVAIVAQQPNASQRSYQQARRVLDDAIAAHGGLEALRAIKDFTLKEKGKIYARYQSPA
Ga0075433_114055881	3300006852	Populus Rhizosphere	MKLKLFVVATIIALLTSAVASAQQLDASQRSYQQARRVLDDAITAHGGVEALREVKDFTLKEKGKLHARYQSPAAEPPFVVGTSEETLIVDTERGFVY
Ga0075420_1003224663	3300006853	Populus Rhizosphere	MNRKLFFAASLVLLLTATPLVAQQSNASMRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKLHARFQSPSAEPPFSVGTSEETLIVDTERGFVFDDLK
Ga0075434_1016347691	3300006871	Populus Rhizosphere	MKLRLFLIATLFVLLASVAIVAQQPNASQRSYQQARRVLDDAIVAHGGLEALRAIKDFTLKEKGKIYARYQ
Ga0075434_1021078522	3300006871	Populus Rhizosphere	MNQKLFVVATLVTLLAGTSIFAQQPDASQRSYQQARRVLDDAIEAHGGVEALRAVKDFTLKEKGKVYARFQSPG
Ga0075424_1027265371	3300006904	Populus Rhizosphere	MKLKLFVVATLIVLHASSAVPAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAVKDFTLKEKSKVYARYQSPAAEPPFAAGTSEETLIVDTERGFVFDDVK
Ga0079219_100082221	3300006954	Agricultural Soil	MKHQRFFLIVTLVFSTSITLMAQQAGAPQRSYQQARRVLEDAIEAHGGLEALRAIKDFTLTEKGKVYARYQSPGADPP
Ga0075419_106885372	3300006969	Populus Rhizosphere	MKLKLFVAATLIVLHASSAVLAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKSKIHARYQSPAAEPPFAVG
Ga0079218_107111731	3300007004	Agricultural Soil	MKQRLYLIATLILLQASTSVVAQQLTASQRSYQQARRVLDDAIEAHGGLEALRGVKDFTLKEKGKVH
Ga0105240_122357621	3300009093	Corn Rhizosphere	MHQRLFLIFTFVLSTAIALMGQQPSVPQRSYQQARGVLDDAIAAHGGVEALRSIKDFTLKEKGKVYARFQSPSAEPPFSAGNSEETLIVDTERGYVFDDL
Ga0105245_124061911	3300009098	Miscanthus Rhizosphere	MHQRLFLIATLVLSTSITLMAQQPSAAQRSYQQARRVLDDAIEAHGGLEALRGIKDFTLKEKGKVYARFQSPGAEPPFSA
Ga0105245_128022521	3300009098	Miscanthus Rhizosphere	MKVKLFVVATLVVLQVSAAASAQQLDASQRSYKDARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPA
Ga0114129_125043261	3300009147	Populus Rhizosphere	MNRKLFFAATLVLLLTATPLFAQQSDASMRSYQQARRVLDDAIEAHGGIEALRAIKDFTLKEKGKLHARFQSPAAEPPFSVGTS
Ga0075423_130107331	3300009162	Populus Rhizosphere	MKLKLFVVATLIVLQASAVVSAQQVDASQRSYQQARRVLDDAITAHGGLEALRAVKDFTLKEKGKVHARYQSPAAEPPFAVGTSEETLIVDTERGLVYDDLKT
Ga0105241_100505872	3300009174	Corn Rhizosphere	MKLRLFLIATLFVLLASVAIVAQQPNASQRSYQQARRVLDDAIAAHGGLEALRAIKDFTLKEKGKIYARYQSPAADGPFVAGTSEETLIIDTERNYVFDDLKTS
Ga0105241_105011301	3300009174	Corn Rhizosphere	MKRKLLVVATLILLQASISIPSIIAQQPNAPQRSYQQARRVLDDAIAAHGGVEAMRAIKDFTLKEKGKLYARFQSPGAE
Ga0105242_118954071	3300009176	Miscanthus Rhizosphere	MKRKLFVVATLILLQASISIPSIIAQQPNAPQRSYQQARRVLDDAIAAHGGVEAMRAIKDFTLKEKGKLYARFQSPGAEPPFAIGTSEETLIVDVE
Ga0105248_123580661	3300009177	Switchgrass Rhizosphere	MKLKLFVVATLIVLQASAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPP
Ga0105248_131048141	3300009177	Switchgrass Rhizosphere	MKLKLFVVATLLVLHAASAAPAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKVHARYHSMARRPP
Ga0126315_100404355	3300010038	Serpentine Soil	LEYLPDFGEESTTMKLKLFVVATLFVMQVSTAVLAQQPNASQRSYQQASRVLDDAIAAHGGVEALRAIKDFTLKEKGKLYARNQSPAAEGLPAVGTSEETLIIDTEQKAKSDQRHPA*
Ga0126384_122492691	3300010046	Tropical Forest Soil	MNRTLLLLVTLIILAPTSVFAQQPNAAQRSYQQARRVLDDAIAAHGGVEALRAVKDFTLKEKGKLYARYQSPGA
Ga0126382_107897892	3300010047	Tropical Forest Soil	MKLKLFVVATLITLLASAAASAQQLDASQRSYQQARRVLDDAITAHGGVEALREVKDFTL
Ga0126370_100514833	3300010358	Tropical Forest Soil	MKLKLFVVATMLALHASSAVLAQQPDASQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKERGKIYARYQSPAAEPPFAVGTSEETLIIDTER
Ga0126377_117219931	3300010362	Tropical Forest Soil	MHRKLFFVSTLILLLAATPLVAQQPDASQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKI
Ga0134128_110755061	3300010373	Terrestrial Soil	MNRTLFVVVTLILLQASTSVIAQQSDASQRSYQQARRVLDDAIEAHGGLEALRGIKDFTLKEKGKLYARYQSPGAEPPYAAGASEETL
Ga0134128_121456732	3300010373	Terrestrial Soil	MKQKLFVVATLIILQASTSIVAQQTNAAQRSYQQARRVLDDAIAAHGGLEALRAIKDFTLTEKGKLYARYQSPAPEPPFAAGT
Ga0105239_134760101	3300010375	Corn Rhizosphere	MHRKLFLLATLTLLQASTSIVAQQTNAPQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARFQSPTAELPYAIGTSEETLIVDM
Ga0134126_122800591	3300010396	Terrestrial Soil	MKLKLFVVATLIVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPPYVVG
Ga0134124_123070891	3300010397	Terrestrial Soil	MKQRLFVVTTLILLLASISIPSIIAQQPNAPQRSYQQARRVLDNAIAAHGAVEAMRAIKD
Ga0134127_115769511	3300010399	Terrestrial Soil	MRHTLLLFATLLILQASAAVIAQQPNAPQRSYQQARRVLDDAIQAHGGLEALRGIKDFTLKEKGKLHARFQSPGAEPPFAVGTSEELLVVDTDRGLVY
Ga0134127_132021051	3300010399	Terrestrial Soil	MKQKLFAVATLLALQASTSIPSIIAQQPNAPQRSYQQARRVLDDAIEAHGGLEALRSI
Ga0134121_108835851	3300010401	Terrestrial Soil	MKVKLFVVATLVVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPPYVVGASEETLIVDTERGFVYD
Ga0105246_101046221	3300011119	Miscanthus Rhizosphere	MHRKLFLLATLTLLQASTSIVAQQTNAPQRSYQQARRVLDDAIEAHGGVEALPAIKHFPLKEKGNLHARFQSPTADL
Ga0137382_103281401	3300012200	Vadose Zone Soil	MKQKLFVVATLIILQASTSIVAQQPNAPQRSYQQARRVLDDAIEAHGGLEALRAIKDFTL
Ga0137359_100333606	3300012923	Vadose Zone Soil	MNQKLFVVATLIILQASTSINAQQLNAPQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKVHARFQSPAAEPPF
Ga0137359_105504422	3300012923	Vadose Zone Soil	MKQKLFVVATLIILQASTSINAQQLNAPQRSYQQARRVLDDAIEANGGLEALRAIKDFTLKEKGKVHARFQSPAAEPPF
Ga0164299_111490601	3300012958	Soil	MPTGFLDERTTTMKQKLFVVATLLVLQASTSISLVAQQPNAPQRSYQQARHVLDDAIEAHGGLEALRSIKDFTLKEKGKLYARYQSPAAEPPFASG
Ga0157373_104005063	3300013100	Corn Rhizosphere	MKLKLFVVATLIVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTL
Ga0157374_115447331	3300013296	Miscanthus Rhizosphere	MHQRLFLIATLVLSTSLTLVAQQPGAPQRSYQQARRVLDDAIAAHGGVEALRAIKDFTLKERGKVYARFQSPGVDQISAGNS
Ga0163162_126248322	3300013306	Switchgrass Rhizosphere	MKLKLFVVATLVTLLASAAASAQQLDASQRSYQQARRVLDDAITAHGGVEALREVKDFTLKEKGKLHARYQSPAAEPPFVVGASEETLIVDT
Ga0120188_10035562	3300013760	Terrestrial	MHRKLFLVATLILLQASTSVIAQQANAPQRSYQQARRVLDDAIEAHGGVEAMRAIKDFTLKEKGKLIARFQ
Ga0163163_115977922	3300014325	Switchgrass Rhizosphere	MKLKLFFVATLLVLHAASAAPAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKVHARYQSPAAEPPFVAGTSEETLIVD
Ga0157377_103237933	3300014745	Miscanthus Rhizosphere	MKLKLFVVATLVVLQVSAAASAQQLDASQRSYKEARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPPYVVGA
Ga0132257_1022669672	3300015373	Arabidopsis Rhizosphere	MKLRLFLIATLFVLLASVAIVAQQPNASQRSYQQARRVLDDAIAAHGGLEALRAIKDFTLKEKGKIYARYQSPAADGPFVAGTSEETLIIDTER
Ga0132257_1036297311	3300015373	Arabidopsis Rhizosphere	MKLKLFVVATLIVLQASAATQAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKDFTLREKGKIYAR
Ga0132255_1023177162	3300015374	Arabidopsis Rhizosphere	MHQRLFLIATLVLSTSITLMAQQPSAAQRSYQQARRVLDDAIEAHGGLEALRGIKDFTLK
Ga0163161_114675851	3300017792	Switchgrass Rhizosphere	MKLKLFVVATLIVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPAAEPPYVVGASEETLIVDTDRG
Ga0184637_107665001	3300018063	Groundwater Sediment	MKQKLFVVATFIVLQASTSTIAQQPNASERSYQQARRVLDDAIEAHGGLEALRAIKDFTLKERGKLHARFQSPASEPPFATGTSEELLIVDTDRGFVFDDL
Ga0190273_121263341	3300018920	Soil	MKHKLFVVAALIMLLAATSLSLVAQQPNAPYRSYQQARRVLYDAVAAHGRLTALREIKDFTLKEKGKLHARFQSPTAEQPFATGTSEETLI
Ga0190264_119245271	3300019377	Soil	MHRKLFLVATLVLLQASTSVVAQQINAPQRSYQQARRVLDDAIEAHGGIEAMRAIKDFTLKEKGKL
Ga0193719_101257162	3300021344	Soil	LIILQASTSIIAQLNASQRSYQQARRALDDAIEAHGGLEALRGIKDFTLKEKGKLHALYQILRNKGVR
Ga0207710_107850371	3300025900	Switchgrass Rhizosphere	MSQKLFLVVTLILLLSPTLVAQQLNAPLRSYQQARRVLDDAIEAHGGVEALRSIKDFTLKEKGKIHARFQSPAAEPPFVTGTSEETLIVDTERGL
Ga0207643_111456141	3300025908	Miscanthus Rhizosphere	MKLKLFVVATLLTLQASAAVNAQQPDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHA
Ga0207660_106960421	3300025917	Corn Rhizosphere	MHRKLFLLATLTLLQASTSIVAQQTNAPQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARFQSPTAELP
Ga0207662_101012852	3300025918	Switchgrass Rhizosphere	MKHKLSVVAALIVLQAAISLPSLVAQQSNAPYRSYQQARRVLDDAIAAHGGVAALREIKDFTLTEKGKLYARFQSPTAEEPFVVGTS
Ga0207646_110660801	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKLLIVATLLVLQASTSVFAQQPNASQRSYQQARRVLDDAIEANGGVEALRAIKDFTLKEKGKIYARFQSPASEPPFVAGTSEETLIVDTDRGFV
Ga0207687_113732861	3300025927	Miscanthus Rhizosphere	MKLKLFVVATLLMLHASSAVPAQQLDASQRSYQQARRVLDDAIEAHGGLEALRAVKDFTLKEKSKVYARYQSPAAEPPFTAGTSEETLIVDTERGFVF
Ga0207690_104294122	3300025932	Corn Rhizosphere	MNRKLFFAASLVLLLTATPLVAQQSTASMRSYQQARRVLDDAIEAHGGVEAMRAIKDFTLKEKGKLHARFQSPAAEPP
Ga0207706_111843111	3300025933	Corn Rhizosphere	MNRKLFFAASLVLLLTAIPLVAQQSNASMRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARFQSPAAEIPF
Ga0207689_108014451	3300025942	Miscanthus Rhizosphere	MKRKLFVVATLILLQASISIPSIIAQQPNAPQRSYQQARRVLDDAIAAHGGVEAMRAIKDFTLKEKGKLYARFQSPGAEPPFAI
Ga0207689_113689192	3300025942	Miscanthus Rhizosphere	MKLKLFVVATLILLQASVNARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKGFTLKEKGKT
Ga0207651_113153291	3300025960	Switchgrass Rhizosphere	MHQRLFLIATIVLSTSITLLAQQPSAAQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKVYARFQSPGVD
Ga0207712_107512292	3300025961	Switchgrass Rhizosphere	MKLKLFVVATIIALLTSAVASAQQLDASQRSYQQARRVLDDAITAHGGVEALREVKDFTLKEKGKLH
Ga0207639_117200071	3300026041	Corn Rhizosphere	MKLKLFVVATLILLQASVNARAQQVDASQRSYQQARRVLDDAIAAHGGLEALRAVKDFTLKEKGKTYARYQSPAAEPPFAASTSEETLI
Ga0207676_106855101	3300026095	Switchgrass Rhizosphere	MKLKLFVVATLVVLQVSAAASAQQLDASQRSYQQARRVLDDAITAHGGLEALREVKDFTLKEKGKLHARYQSPA
Ga0209687_12444371	3300026322	Soil	MNRTLFLVVTLILLLASTSIIAQQPDASQRSYQQARRVLGDAIEAHGGLEALRAIKDFTLKEKGKLYARYQSPGAEPPYAAGASEETLIID
Ga0257164_10328621	3300026497	Soil	MRQKLFVVAALIILQASTSIIAQQLNAPQRSYQQARRVLDDAIEAHGGLEAMRAIKDF
Ga0209488_105071962	3300027903	Vadose Zone Soil	MKQKLFVVATLIILQASTSINAQQLNAPQRSYQQARRVLDDAIEANGGLEALHAIKDFTLKEKSKIYARFQSPAAEPPFAIG
Ga0268264_124339812	3300028381	Switchgrass Rhizosphere	MHQRLFLIATLVLSTSITFMAQQPSAPQRSYQQARRVLDDAIAAHGGVEALRSIKDFTLKEKGKVYARFQSPSAEPPFSAGNSEETL
Ga0307504_104102122	3300028792	Soil	MKQKLFVVATLIVLQASTAIVAQQPNVAQRSYQQARRVLDDAIEAHGGLEALRAIKDFTLKEKGKLYARF
Ga0307408_1003602211	3300031548	Rhizosphere	MRQKLFLVAGLLLLQVSTSIMAQQLTAAERSYQQARRVLNDAIEAHGGVEALRAIKDFTLKEKGKLHARYQSPNGD
Ga0307408_1024265992	3300031548	Rhizosphere	MRQKLFLVAALLLLQVSTSITAQQLTAAQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARYQS
Ga0307410_105233992	3300031852	Rhizosphere	MRQKLFLVAALLLLQVSTSIMAQQLTAAQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEK
Ga0307409_1010480052	3300031995	Rhizosphere	MRQKLFLVAGLLLLQVSTSIMAQQLTAAQRSYQQARRVLDDAIEAHGGVEALRAIKDFTLKEKGKLHARYQSPNGDG
Ga0307415_1021100442	3300032126	Rhizosphere	MKQKLFVFATLIILQTSTAIFSQQTNAPYRSYQQARRVLDDAIAAHGGVEALRAIKDFKLTEKGKVYARFQSPTAEQPFAAGTSEETLIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073996

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences