Metagenome / Metatranscriptome Family F074081

Basic Information
Family ID	F074081
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	73 residues
Representative Sequence	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDSKHYHVWCLLDRLAFGSPLPPTATADSVSHWGLMP
Number of Associated Samples	95
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.33 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	79.17 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (55.833 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.333 % of family members)
Environment Ontology (ENVO)	Unclassified (35.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.833 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 11.11% Coil/Unstructured: 79.80%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00902	TatC	16.67
PF01557	FAA_hydrolase	3.33
PF02586	SRAP	2.50
PF12833	HTH_18	2.50
PF08388	GIIM	1.67
PF02416	TatA_B_E	1.67
PF10431	ClpB_D2-small	1.67
PF00501	AMP-binding	0.83
PF01734	Patatin	0.83
PF00486	Trans_reg_C	0.83
PF06912	DUF1275	0.83
PF08669	GCV_T_C	0.83
PF04972	BON	0.83
PF02321	OEP	0.83
PF00691	OmpA	0.83
PF07638	Sigma70_ECF	0.83
PF00069	Pkinase	0.83
PF07883	Cupin_2	0.83
PF00165	HTH_AraC	0.83
PF00857	Isochorismatase	0.83
PF13193	AMP-binding_C	0.83
PF01370	Epimerase	0.83
PF16350	FAO_M	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	16.67
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.33
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.50
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.67
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	1.67
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.83
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.83
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.83
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
All Organisms	root	All Organisms	44.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
cellular organisms	root	All Organisms → cellular organisms	44.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100924736	Not Available	738	Open in IMG/M
3300005332\|Ga0066388_102345225	Not Available	967	Open in IMG/M
3300005363\|Ga0008090_15849783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1677	Open in IMG/M
3300005435\|Ga0070714_101157010	Not Available	754	Open in IMG/M
3300005436\|Ga0070713_100242214	All Organisms → cellular organisms → Bacteria → Proteobacteria	1643	Open in IMG/M
3300005439\|Ga0070711_100757921	Not Available	821	Open in IMG/M
3300005586\|Ga0066691_10140586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1383	Open in IMG/M
3300005764\|Ga0066903_100294030	All Organisms → cellular organisms → Bacteria → Proteobacteria	2562	Open in IMG/M
3300006163\|Ga0070715_10480960	Not Available	707	Open in IMG/M
3300006358\|Ga0068871_100585887	Not Available	1013	Open in IMG/M
3300006796\|Ga0066665_11151278	Not Available	591	Open in IMG/M
3300007265\|Ga0099794_10162091	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300009012\|Ga0066710_104890230	Not Available	501	Open in IMG/M
3300009038\|Ga0099829_10648039	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300009143\|Ga0099792_11219697	Not Available	511	Open in IMG/M
3300010048\|Ga0126373_10099855	Not Available	2682	Open in IMG/M
3300010048\|Ga0126373_10287034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1635	Open in IMG/M
3300010048\|Ga0126373_10367694	Not Available	1455	Open in IMG/M
3300010048\|Ga0126373_11282800	Not Available	798	Open in IMG/M
3300010048\|Ga0126373_12096573	Not Available	627	Open in IMG/M
3300010048\|Ga0126373_13005454	Not Available	526	Open in IMG/M
3300010358\|Ga0126370_12565884	Not Available	509	Open in IMG/M
3300010361\|Ga0126378_10958139	Not Available	960	Open in IMG/M
3300010361\|Ga0126378_11028840	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300010361\|Ga0126378_12423333	Not Available	599	Open in IMG/M
3300010376\|Ga0126381_100011131	All Organisms → cellular organisms → Bacteria	10158	Open in IMG/M
3300010376\|Ga0126381_100113592	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300010376\|Ga0126381_101648167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300010398\|Ga0126383_11709520	Not Available	718	Open in IMG/M
3300012202\|Ga0137363_10426497	Not Available	1107	Open in IMG/M
3300012205\|Ga0137362_10228740	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300012205\|Ga0137362_10792044	Not Available	812	Open in IMG/M
3300012211\|Ga0137377_11687578	Not Available	555	Open in IMG/M
3300012361\|Ga0137360_11781562	Not Available	521	Open in IMG/M
3300012362\|Ga0137361_10195960	Not Available	1825	Open in IMG/M
3300012582\|Ga0137358_10999178	Not Available	541	Open in IMG/M
3300012683\|Ga0137398_10226699	Not Available	1239	Open in IMG/M
3300012917\|Ga0137395_10873275	Not Available	651	Open in IMG/M
3300012923\|Ga0137359_10116023	Not Available	2373	Open in IMG/M
3300012929\|Ga0137404_10530543	Not Available	1053	Open in IMG/M
3300012930\|Ga0137407_11122842	Not Available	745	Open in IMG/M
3300012971\|Ga0126369_13027977	Not Available	550	Open in IMG/M
3300014969\|Ga0157376_12897051	Not Available	519	Open in IMG/M
3300015374\|Ga0132255_105400540	Not Available	541	Open in IMG/M
3300016270\|Ga0182036_10804138	Not Available	766	Open in IMG/M
3300016270\|Ga0182036_11606728	Not Available	547	Open in IMG/M
3300016294\|Ga0182041_11426013	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300016294\|Ga0182041_11912284	Not Available	551	Open in IMG/M
3300016319\|Ga0182033_10446395	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300016371\|Ga0182034_10442659	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300016422\|Ga0182039_10113459	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300016445\|Ga0182038_10493988	Not Available	1043	Open in IMG/M
3300017959\|Ga0187779_10055648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2313	Open in IMG/M
3300017959\|Ga0187779_11309458	Not Available	513	Open in IMG/M
3300017961\|Ga0187778_10001379	All Organisms → cellular organisms → Bacteria	16964	Open in IMG/M
3300017966\|Ga0187776_10525504	Not Available	813	Open in IMG/M
3300017970\|Ga0187783_10250718	Not Available	1295	Open in IMG/M
3300017973\|Ga0187780_11217094	Not Available	552	Open in IMG/M
3300017974\|Ga0187777_10073197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2224	Open in IMG/M
3300017974\|Ga0187777_10612098	Not Available	768	Open in IMG/M
3300017974\|Ga0187777_10676869	Not Available	731	Open in IMG/M
3300018058\|Ga0187766_10052233	Not Available	2405	Open in IMG/M
3300018058\|Ga0187766_10211203	Not Available	1228	Open in IMG/M
3300018060\|Ga0187765_10026233	Not Available	2828	Open in IMG/M
3300018062\|Ga0187784_10038203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3885	Open in IMG/M
3300020579\|Ga0210407_10056365	Not Available	2938	Open in IMG/M
3300020579\|Ga0210407_10458645	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300020581\|Ga0210399_10359547	Not Available	1215	Open in IMG/M
3300020582\|Ga0210395_10668193	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300021086\|Ga0179596_10000575	All Organisms → cellular organisms → Bacteria → Proteobacteria	9910	Open in IMG/M
3300021171\|Ga0210405_10027756	All Organisms → cellular organisms → Bacteria	4549	Open in IMG/M
3300021403\|Ga0210397_11012268	Not Available	645	Open in IMG/M
3300021432\|Ga0210384_10012653	All Organisms → cellular organisms → Bacteria	8451	Open in IMG/M
3300021560\|Ga0126371_10284121	Not Available	1777	Open in IMG/M
3300021560\|Ga0126371_10432583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300021560\|Ga0126371_12853163	Not Available	586	Open in IMG/M
3300026285\|Ga0209438_1184476	Not Available	552	Open in IMG/M
3300027903\|Ga0209488_10556176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300031543\|Ga0318516_10342177	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300031544\|Ga0318534_10056580	All Organisms → cellular organisms → Bacteria → Proteobacteria	2203	Open in IMG/M
3300031545\|Ga0318541_10361141	Not Available	811	Open in IMG/M
3300031546\|Ga0318538_10199658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300031549\|Ga0318571_10149378	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300031573\|Ga0310915_10078000	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300031573\|Ga0310915_10794973	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300031681\|Ga0318572_10267056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1008	Open in IMG/M
3300031682\|Ga0318560_10296626	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031718\|Ga0307474_10572651	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300031747\|Ga0318502_10228934	Not Available	1081	Open in IMG/M
3300031754\|Ga0307475_10027149	Not Available	4105	Open in IMG/M
3300031754\|Ga0307475_10481954	Not Available	996	Open in IMG/M
3300031754\|Ga0307475_10890399	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300031770\|Ga0318521_10488423	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300031770\|Ga0318521_10852022	Not Available	556	Open in IMG/M
3300031771\|Ga0318546_10028212	Not Available	3314	Open in IMG/M
3300031777\|Ga0318543_10347097	Not Available	664	Open in IMG/M
3300031779\|Ga0318566_10311772	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300031782\|Ga0318552_10450175	Not Available	657	Open in IMG/M
3300031796\|Ga0318576_10338231	Not Available	711	Open in IMG/M
3300031799\|Ga0318565_10047021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1994	Open in IMG/M
3300031820\|Ga0307473_11340962	Not Available	537	Open in IMG/M
3300031835\|Ga0318517_10256728	Not Available	789	Open in IMG/M
3300031879\|Ga0306919_11208008	Not Available	574	Open in IMG/M
3300031893\|Ga0318536_10027847	All Organisms → cellular organisms → Bacteria → Proteobacteria	2624	Open in IMG/M
3300031910\|Ga0306923_11040304	Not Available	887	Open in IMG/M
3300031912\|Ga0306921_10082902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3695	Open in IMG/M
3300031912\|Ga0306921_10298133	All Organisms → cellular organisms → Bacteria → Proteobacteria	1888	Open in IMG/M
3300031946\|Ga0310910_11462410	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300031981\|Ga0318531_10234162	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300032001\|Ga0306922_10184827	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300032009\|Ga0318563_10690009	Not Available	548	Open in IMG/M
3300032042\|Ga0318545_10063689	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300032054\|Ga0318570_10158157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300032059\|Ga0318533_10290893	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300032059\|Ga0318533_10801972	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300032076\|Ga0306924_11061992	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300032174\|Ga0307470_10566731	Not Available	843	Open in IMG/M
3300032180\|Ga0307471_100648423	Not Available	1218	Open in IMG/M
3300032261\|Ga0306920_100300222	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300032783\|Ga0335079_10015199	All Organisms → cellular organisms → Bacteria	8798	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.50%
Host-Associated	Host-Associated	2.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.50%
Plants	Host-Associated → Plants	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Roots	Host-Associated → Plants → Roots	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.67%
Loam	Environmental → Terrestrial → Soil → Loam	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1009247362	3300004479	Soil	MSWKWNTGPLDWKDKCSMCQQPLRLQGDGGTVIWTDSKHYHIWCLLDRLAFGSPLPQRATAA*
Ga0066388_1023452251	3300005332	Tropical Forest Soil	MSWSWSTEPLSWKDKCSRCQQPLRVQGDGGILIWIDSEHYHVSCLLDRLAFGSPLPQGPTADSVSHWGIMP*
Ga0008090_158497831	3300005363	Tropical Rainforest Soil	MSWRWNTELLSWKDTCSSCQQPLRVQGDGGIVIWTDSKHYHVWCLLDRLAFDSPLPPTATADSVSHWGLMP*
Ga0070714_1011570101	3300005435	Agricultural Soil	MSWKWNTGPLAWKDKCSMCQQPLRLQGDGGTVIWTDSQHYHIWCLLDRLAFGSPLPQAPTADSVSHWGIKP*
Ga0070713_1002422143	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKWNTGPLAWKDKCSMCQQPLRVQGDGGIVIWTDSKHYHVCCLLDQLAFGSPLPQGPTADSVSHWGI
Ga0070711_1007579212	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKWNTGPLAWKDKCSMCQQPLRLQGDGGTVIWTDSQHYHIWCLLDRLAFGSPLPQRATAD*
Ga0066691_101405862	3300005586	Soil	LARARLRVVPLRVLLAHLSEGDAMRWRWNTEPLSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAFRGPLPQRATADSVSHWGPMP*
Ga0066903_1002940303	3300005764	Tropical Forest Soil	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDSKHYHVWCLLDRLAFGSPLPPTATADSVSHWGLMP*
Ga0070715_104809601	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKWNTGPLTWKDKRSMCEQPLRTQGDGGIVTWTDSKHYHVSCLLERLAFPSPAPEAATADFVSHWGPQPP*
Ga0068871_1005858872	3300006358	Miscanthus Rhizosphere	MSWRWNTEPLSWRDKCSRCQQPLRVQGDGGIVIWTDGEHYHVSCLLDWLAFWSPLPQGPTADSVSHWG*
Ga0066665_111512781	3300006796	Soil	LARARLRVVPLRVLLAHLSEGDAMRWKWNTEPLSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAFRGPLPQRATADSVSHWGPMP*
Ga0099794_101620912	3300007265	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATADSVSHWGPMP*
Ga0066710_1048902302	3300009012	Grasslands Soil	MRWKWNTEPLSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAFRGPLPQRATADSVSHWGPMP
Ga0099829_106480392	3300009038	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATPDSVSHWGPMP*
Ga0099792_112196972	3300009143	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRAT
Ga0126373_100998558	3300010048	Tropical Forest Soil	MHWKWHTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDRLAAVSPLPQVAMADSVSHWGPAP*
Ga0126373_102870343	3300010048	Tropical Forest Soil	MSWRWNTEPLNWRDKCSRCQQPLRVQGDGGIVIWTDVKHYHVSCLLDQLAFWNPLPQGPTADSVSHWGIMP*
Ga0126373_103676941	3300010048	Tropical Forest Soil	MNWKWNTDPLSWKDKCSVCQQPLRAQGDGGIVTWTDRKHYHVWCILDRLAAVSPLPQ
Ga0126373_112828001	3300010048	Tropical Forest Soil	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGVVIWTDSKHYHVWCLLDQLAFGSPLPPTATADSVSHW
Ga0126373_120965732	3300010048	Tropical Forest Soil	MQHAREAATVWSIMSPERDAMSWKWNTGPLTWRDKCSMCEQPLRVQGDSGIVTWTDSKHYHVWCLLDRLALGNPIPSSATGDSVSHWGLMP*
Ga0126373_130054542	3300010048	Tropical Forest Soil	MNWKWNTDSLSAKDKCSMCDQPLRVQADGGVVIWTDSKQYHVSCLLDRLAAGRSPQQTETVDSVSHWGFVP*
Ga0126370_125658841	3300010358	Tropical Forest Soil	HGSESDAMSWRWNTEPLRWKDKCSRCQQPLRVQGDGGIVIWTDSKHYHVSCLLDRLAFGSPLPQGPTADSVSHWGLMP*
Ga0126378_109581391	3300010361	Tropical Forest Soil	MQHAREAATVWSIMSPEGDAMSWKWNTGPLTWRDKCSMCEQPLRVQGDSGIVTWTDSKHYHVWCLLDRLALGNPIPSSATGDSVSHWGLMP*
Ga0126378_110288402	3300010361	Tropical Forest Soil	MSWKWNTEPLGWKDRCSVCQEPLRVQGDGGIVIWTDGRHYHVWCLLDRLAFGSPLPPTATADSVSHWGLMP*
Ga0126378_124233332	3300010361	Tropical Forest Soil	MSWRWNTEPLNWRDKCSRCQQPLRVQGDGGIVIWTDVKHYHVSCLLDQLAFASPLPQGPTADSVSHWGIMP*
Ga0126381_1000111311	3300010376	Tropical Forest Soil	MSWRWNTEPLSWRDKCSRCEQPLRVQGGGGIVTWTDSKHYHVSCLLDRLAWSPLPPPGSTADSVSHWGIVP*
Ga0126381_1001135922	3300010376	Tropical Forest Soil	MSWKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDRLASGSPLPQVAMDSVSHWGPAP*
Ga0126381_1016481672	3300010376	Tropical Forest Soil	MNWKWNTDSLTWNDKCSMCQEPLQAQGDGGVVLWTDSKQYHVSCLLDRLAAGSPHAQMETVDGVSHWGFVP*
Ga0126383_117095202	3300010398	Tropical Forest Soil	MSWRWNTEPLSWKDKCSRCQQLLRVQGDGGIVIWTDSKHYHVSCLLDRLAFGSPLPQGPTADSVSHWGIMP*
Ga0137363_104264971	3300012202	Vadose Zone Soil	MRWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATPDSVSHWGPMP*
Ga0137362_102287402	3300012205	Vadose Zone Soil	MRWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYTGPLPQRATADSASHWGPMP*
Ga0137362_107920442	3300012205	Vadose Zone Soil	MSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATPDSVSHWGPMP*
Ga0137377_116875782	3300012211	Vadose Zone Soil	MSWKWNTEPLSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAFRGPLPQRATADSVSHWGPMP*
Ga0137360_117815622	3300012361	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVTWTDSKHYHVWCLLDRLARLAYAGPLPQRATADSVSHWGPMP*
Ga0137361_101959603	3300012362	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWIDRKHYHVWCLLDRLARLAYAGPLPQRATPDSVSHWGPMP*
Ga0137358_109991781	3300012582	Vadose Zone Soil	LARARLRVVPLRVLLAHLSEGDAMRWKWNTEPLSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRAAADSVSHWGPMP*
Ga0137398_102266991	3300012683	Vadose Zone Soil	VTPGKHARSLPTDGAIDRPLRLHWRARLRVVPLRVLLAHLSEGDAMRWKWNTEPLSWKDKCSMCQQPLRVQGDGGVVTWTDSKHYHVWCLLDRLARLAFRGPLPQRATADSVSHWGPMP*
Ga0137395_108732751	3300012917	Vadose Zone Soil	ARLRVVPLRVLLPHLSEGDAMSWKWNTEPLSWKAKCSMCHQPLRVQGDGGVVTWTDSKHYHVWCLLDRLARLAYAGPLPQRATADSVSHWGPMP*
Ga0137359_101160232	3300012923	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQGPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRAAADSVSHWGPMP*
Ga0137404_105305431	3300012929	Vadose Zone Soil	MSWKWNTEPMSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAFRGPLPQRATADSVSHWGPLP*
Ga0137407_111228421	3300012930	Vadose Zone Soil	MSWKWNTEPLSWKDKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATADSVSHWGPMP*
Ga0126369_130279771	3300012971	Tropical Forest Soil	MSWKWNTEPLGWKDSCSVCQQPLRVQGDGGIVIWTDSKHYHVSCLLDRLAFGSPLPQAPTADSVSHWGIMP*
Ga0157376_128970511	3300014969	Miscanthus Rhizosphere	ESDAMGWRWNTEPLSWRDKCSGCQQQLRVQGDGGIVTWTDSKHYYVSCLLDRLAFGSPLPQAPTADSVSHWGIIP*
Ga0132255_1054005401	3300015374	Arabidopsis Rhizosphere	MSWKWNTEPLSWKDKCSMCQQALRIHGDGGIVIWTDSNHYHVWCLLERLAFWSPLPPSATAYRTGE*
Ga0182036_108041381	3300016270	Soil	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDSKHYHVWCLLDRLALGSPLPPTATDSVS
Ga0182036_116067281	3300016270	Soil	ESDAMSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0182041_114260132	3300016294	Soil	THLSESDAMSWRWNTEPLNWRDKCSRCQQPLRIQGDGGIVIWTDGKHYHVSCLLDQLAFWNPLPQGPTADSVSHWGIMP
Ga0182041_119122841	3300016294	Soil	MSWKWNTEPLGWRDRCSVCQQPLRVQGDGGIVIWTDSKQYHVWCLLDRLAFGSPFPPTATSTADSVSHWGLMP
Ga0182033_104463953	3300016319	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADS
Ga0182034_104426592	3300016371	Soil	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDRKQYHVWCLLDRLAFGIPFPPTATSTADSVSHWGLIP
Ga0182039_101134593	3300016422	Soil	MSWRWNTEPLSWRDRCSRCQQPLRVQGDGGIVIWTDGKHYHVSCLLDQLAFASPLPQGPTADSVSHWGIMP
Ga0182038_104939881	3300016445	Soil	MSWKWNTEPLGWRDRCSVCQQPLRVQGDGGIVIWTDSKQYHVWCLLDRLAFGSPPPPTATADSVSHWGLMP
Ga0187779_100556481	3300017959	Tropical Peatland	GKTCRDLPHLPEGAAMSWKWNTEPLSWKEKCSLCEQPLRAQGDGGIVIWTDRKHYHVWCLLDRLSSGSALPQVALADGASHWGRAP
Ga0187779_113094582	3300017959	Tropical Peatland	MSWKWNTDPLGWKDKCSLCQQPLRVQGDGGIVIWTDRKHYHVWCLLDRLASGGALPQMALADGVSHW
Ga0187778_100013793	3300017961	Tropical Peatland	MSWKWNTAPLSWKDKCSLCQQPLRVQADGGIVIWTDRKHYHVWCLLDRLALGGPLPQVARADGVSYWGTAP
Ga0187776_105255042	3300017966	Tropical Peatland	MSWKWNTDPLSWKDKCSTCQQPLRVQGDGGIVIWTDRKHYHVWCLLDRLASGSALPQAALADGVSHWGRAP
Ga0187783_102507183	3300017970	Tropical Peatland	MSWKWNTAPLSWKDKCSVCQQPLRVQGDGGIVIWTDRKHYHVWCLLDRLAGGGQLPQVAMADGVSHWGAAP
Ga0187780_112170942	3300017973	Tropical Peatland	MSWKWNTAPLSWKDKCSVCQQPLRVQGDGGIVIWTDRKHYHVWCLLDRLAVGGPLPQLAMADGVSHWGTAP
Ga0187777_100731975	3300017974	Tropical Peatland	MSWKWNTEPLSWKEKCSLCQQPLRAQGDGGIVIWTDRKHYHVWCLLDRLSSGSALPQVALADGASHWGRAP
Ga0187777_106120982	3300017974	Tropical Peatland	VSWKWNTEPLSWKDKCSLCQQPLRVQGDGGIVTWTDRKHYHVWCILDRLASGSPQPQVAMAESVSHWGPAP
Ga0187777_106768692	3300017974	Tropical Peatland	MSWKWNTEPLGWKDKCCLCQQPLRVQGDGGIVIWTDRKHYHVWCLLDRLASGSALPQMALADGVSHWGRAP
Ga0187766_100522335	3300018058	Tropical Peatland	MSWKWNTEPLSWKEKCSLCEQPLRAQGDGGIVIWTDRKHYHVWCLLDRLSSGSALPQVALADGVSHWGRAP
Ga0187766_102112033	3300018058	Tropical Peatland	VSWKWNTEPLSWKDKCSLCQQPLRVQGDGGIVTWTDRRHYHVWCILDRLASGSPQPQVAMAESVSHWGPA
Ga0187765_100262331	3300018060	Tropical Peatland	MSWKWNTEPLSWREKCSLCQQPLRAQGDGGIVIWTDRKHYHVWCLLDRLSSGSALPQVALADG
Ga0187784_100382037	3300018062	Tropical Peatland	MSWKWNTAPLNWKDKCSVCQQPLRVQGDGGIVIWTDRKHYHVWCLLDRLAGGGQLPQVAMADGVSHWGAAP
Ga0210407_100563652	3300020579	Soil	MSWKWNTDPLSWKDKCSVCQQPLRVPGDGGIVTWTDRKHYHVWCILDRLASGIPLPQVAMAESVSHWGPAP
Ga0210407_104586452	3300020579	Soil	MSWKWNTGPLTRKDKCSMCEQPLRTQGDGGIVTWTDSKHYHVSCLLDRLAFPSPVPEAATADFVSHWGPQPP
Ga0210399_103595472	3300020581	Soil	MSWKWNTDPLSWKDKCSVCQQPLRVPGDGGIVTWTDRKHYHVWCILDRLASGSPIPQVAMADSVSHWGPAP
Ga0210395_106681931	3300020582	Soil	ADAMSWKWNTDPLSWKDKCSVCQQPLRVPGDGGIVTWTDRKHYHVWCILDRLASGSPIPQVAMADSVSHWGPAP
Ga0179596_100005751	3300021086	Vadose Zone Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATPDSVSHWGPMP
Ga0210405_1002775612	3300021171	Soil	IDHHLSEADAMSWKWNTDPLSWKDKCSVCQQPLRVPGDGGIVTWTDRKHYHVWCILDRLASGSPIPQVAMADSVSHWGPAP
Ga0210397_110122682	3300021403	Soil	MSWKWNTGPLTRKDKCSMCEQPLRTQGDGGIVTWTDSKHYHVSCLLDWLAFPSPVPEAATADFVSHWGPQPP
Ga0210384_100126531	3300021432	Soil	PPVEADAMSWKWNTDPLSWKDKCSVCQQPLRVPGDGGIVTWTDRKHYHVWCILDRLASGSPIPQVAMADSVSHWGPAP
Ga0126371_102841214	3300021560	Tropical Forest Soil	MNWKWHTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDRLAAGSPLPQVAMADSVSHWGPAP
Ga0126371_104325833	3300021560	Tropical Forest Soil	MSWKWNTEPMGWKDRCSVCQQPLRVQGDGGIVIWTDSKHYHVWCLLDQLAFGSPLPPTATADSVSHWGLMP
Ga0126371_128531631	3300021560	Tropical Forest Soil	TGPLTWRDKCSMCEQPLRVQGDSGIVTWTDSKHYHVWCLLDRLALGNPIPSSATGDSVSHWGLMP
Ga0209438_11844761	3300026285	Grasslands Soil	MSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATP
Ga0209488_105561761	3300027903	Vadose Zone Soil	LARARLRVVPLRVLLPHLSEGDAMSWKWNTEPLSWKAKCSMCQQPLRVQGDGGVVIWTDSKHYHVWCLLDRLARLAYAGPLPQRATADSVSHWGPMP
Ga0318516_103421771	3300031543	Soil	MTHLSESDAMSWRWNTEPLNWRDKCSRCQQSLRVQGDGGIVIWTDGKHYHVSCLLDQLAFASPLPQGPTADSVSHWGIMP
Ga0318534_100565802	3300031544	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0318541_103611412	3300031545	Soil	MSWKWNTEPLGWRDRCSVCQQPLRVQGDGGIVIWTDSKQYHVWCLLDRLAFGSPFPPTATSTADSVSHWGLIP
Ga0318538_101996581	3300031546	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTAD
Ga0318571_101493782	3300031549	Soil	MTHLSESDAMSWRWNTEPLNWRDKCSRCQQPLRIQGDGGIVIWTDGKHYHVSCLLDQLAFWNPLPQGPTADSVSHWGIMP
Ga0310915_100780003	3300031573	Soil	MSWRWDTEPLSWRDKCSRCGEPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0310915_107949732	3300031573	Soil	WNTEPLSWKDRCSVCQPPRVQGDGVIVIWTESKHYHVWCLLDRLTLGSPLPPTATDSVSQWGLMP
Ga0318572_102670561	3300031681	Soil	MTHLSESDAMSWRWNTEPLNWRDKCSRCQQSLRVQGDGGIVIWTDGKHYHVSCLLDQLAFWSPLPQGPTADSVSHWGIMP
Ga0318560_102966262	3300031682	Soil	MSWRWNTEPLSWRDKCSRCQQPLRVEGDGGIVIWTDGKHYHVSCLLDQLAFWSPLPQGPTADSVSHWGIMP
Ga0307474_105726513	3300031718	Hardwood Forest Soil	MSWKWNTGPLTLKDKCSMCEQPLRTQGDGGIVTWTDSKHYHLSCLLDRLAFPSPVPQPSTADFVSHWGPQPP
Ga0318502_102289343	3300031747	Soil	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDSKQYHVWCLLDRLAFGSPFPPTA
Ga0307475_100271494	3300031754	Hardwood Forest Soil	MSWKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDQLASGRPLPQVAMADSASHWGLAP
Ga0307475_104819541	3300031754	Hardwood Forest Soil	MSWKWNTGPLSWKDKCSVCQQPLRLQGDGGIVTWTDRKHYHVWCILDRLASGSPLPQVAMAESVSHWGPAP
Ga0307475_108903991	3300031754	Hardwood Forest Soil	MSWKWNTGPLTWKDQCSMCDQPLRAQGDGGIVTWIDSKHYHVSCLLDRLAFPSPVPEAATPDFVSHWGP
Ga0318521_104884231	3300031770	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSH
Ga0318521_108520221	3300031770	Soil	SESDAMSWRWNTEPLSWRDRCSRCQQPLRVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGPTADSVSHWGIVP
Ga0318546_100282121	3300031771	Soil	MQMNWKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRNHYHVWCILDQLASGRSLPQVALADSASHWGLAP
Ga0318543_103470971	3300031777	Soil	AMSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0318566_103117721	3300031779	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWG
Ga0318552_104501751	3300031782	Soil	AVTAPRRGPGPRLLTHLSESDAMSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGPTADSVSHWGIMP
Ga0318576_103382311	3300031796	Soil	AGKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRNHYHVWCILDQLASGRSLPQVALADSASHWGLAP
Ga0318565_100470212	3300031799	Soil	MTHLSESDAMSWRWNTEPLSWRDKCSRCGQALRIQGDGGIVIWTDGKHYHVSCLLDQLAFASPLPQGPTADSVSHWGIMP
Ga0307473_113409622	3300031820	Hardwood Forest Soil	MSWKWNTGPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDQLASGGPLPQVATADSASHWGRAP
Ga0318517_102567281	3300031835	Soil	LSESDAMSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0306919_112080082	3300031879	Soil	GKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRNHYHVWCILDQLASGRSLPQVALADSASHWGLAP
Ga0318536_100278472	3300031893	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPKGGRRTACRTGE
Ga0306923_110403041	3300031910	Soil	MQMNWKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDRLAAASPLPQVAMADSVSHWGPAP
Ga0306921_100829022	3300031912	Soil	MSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGPTADSVSHWGIMP
Ga0306921_102981334	3300031912	Soil	MSWKWNTGPLGWEDRCSMCQQPLRVQGDGAIVIWTDGKHYHVWCLLDRLAFGSTLAPTATADSVSHWGMMP
Ga0310910_114624102	3300031946	Soil	MSWRWNTEPLSWRDKCSRCEQPLRVQGGGGIVTWTDSNHYHVSCLLDRLAWSPLPPPGSTADSVSHWGIV
Ga0318531_102341622	3300031981	Soil	LMTHLSESDAMSWRWNTEPLNWRDKCSRCGQPLRVQGDGGIVIWTDVKHYHVSCLLDQLAFWNPLPQGPTADSVSHWGIMP
Ga0306922_101848273	3300032001	Soil	MSWRWNTEPLSWRDRCSRCQQPLRVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGPTADSVSHWGIVP
Ga0318563_106900091	3300032009	Soil	VTAPRRGPGPRLLTHLSESDAMSWRWDTEPLSWRDKCSRCGQPLLVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0318545_100636892	3300032042	Soil	MSWKWNTEPLGWKETCSMCQQPLRVQGAGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGRTADSVSHWGIMP
Ga0318570_101581572	3300032054	Soil	MTHLSESDAMSWRWNTEPLNWRDKCSRCQQSLRVQGDGGIVIWTDGKHYHVSCLLDQLAFWNPLPQGPTADSVSHWGIMP
Ga0318533_102908931	3300032059	Soil	MSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDSKQYHVWCLLDRLAFGSPFPPTATSTADSVSHWGLIP
Ga0318533_108019722	3300032059	Soil	MSWRWNTEPLNWRDKCSRCQQPLRIQGDGGIVIWTDGKHYHVSCLLDQLAFWNPLPQG
Ga0306924_110619921	3300032076	Soil	MSWRWNTEPLSWRDRCSRCQQPLRVQGDGGIVIWTDSKHYHVSCLLDRLAWSPLPPQGPTADSVSHWG
Ga0307470_105667313	3300032174	Hardwood Forest Soil	MSWKWNTGPLAWKDKCSMCQQPLRLQGDGGTVIWTDSKHYHIWCLLDRLAFGSPLPQRAT
Ga0307471_1006484231	3300032180	Hardwood Forest Soil	MSWKWNTDPLSWKDKCSVCQQPLRVQGDGGIVTWTDRKHYHVWCILDQLASGGPLPQVATADSASHWGRAP
Ga0306920_1003002221	3300032261	Soil	STTATLSERDAMSWKWNTEPLGWKDRCSVCQQPLRVQGDGGIVIWTDRKQYHVWCLLDRLAFGSPFPPTATSTADSVSHWGLIP
Ga0335079_1001519910	3300032783	Soil	MSWKWNTDPLSWKDKCSLCQQPLRAQGDGGIVIWTDRKHYHVWCLLDRLASGSALAQVALADGVSHWGRAP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074081

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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