Metagenome / Metatranscriptome Family F074129

Basic Information
Family ID	F074129
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	59 residues
Representative Sequence	IPLSGDFVNSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFTHGSRNGITTDVRPITIGVRW
Number of Associated Samples	99
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.52 %
% of genes near scaffold ends (potentially truncated)	95.83 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (97.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.167 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.833 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.36% Coil/Unstructured: 63.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13186	SPASM	62.50
PF03070	TENA_THI-4	2.50
PF12697	Abhydrolase_6	1.67
PF05016	ParE_toxin	1.67
PF09723	Zn-ribbon_8	1.67
PF08241	Methyltransf_11	0.83
PF13505	OMP_b-brl	0.83
PF05402	PqqD	0.83
PF03965	Penicillinase_R	0.83
PF01799	Fer2_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.83
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.50 %
Unclassified	root	N/A	2.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.67 %
Unclassified	root	N/A	2.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.33 %
Unclassified	root	N/A	2.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	3.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.33 %
Unclassified	root	N/A	2.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.33 %
Unclassified	root	N/A	2.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10159392	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300001593\|JGI12635J15846_10777266	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300004091\|Ga0062387_100953760	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300004092\|Ga0062389_100372772	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300004092\|Ga0062389_102116400	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300004092\|Ga0062389_103960902	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005468\|Ga0070707_101688832	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005602\|Ga0070762_10815802	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005712\|Ga0070764_10869336	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005921\|Ga0070766_10185994	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300009090\|Ga0099827_10047137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3223	Open in IMG/M
3300009521\|Ga0116222_1241078	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300009521\|Ga0116222_1346952	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300009523\|Ga0116221_1551580	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009636\|Ga0116112_1223269	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300009641\|Ga0116120_1188143	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009700\|Ga0116217_10970355	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009759\|Ga0116101_1013201	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300009759\|Ga0116101_1046960	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300009824\|Ga0116219_10153883	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300010341\|Ga0074045_10637177	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300010379\|Ga0136449_100894099	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300010876\|Ga0126361_10502189	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300011079\|Ga0138569_1193669	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300011120\|Ga0150983_11258088	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300011120\|Ga0150983_13059639	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300012917\|Ga0137395_11300448	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300014165\|Ga0181523_10140839	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300014165\|Ga0181523_10234546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1052	Open in IMG/M
3300014201\|Ga0181537_10019977	All Organisms → cellular organisms → Bacteria	4739	Open in IMG/M
3300014201\|Ga0181537_10817254	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300014489\|Ga0182018_10740545	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300014501\|Ga0182024_12161868	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300017933\|Ga0187801_10055594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300017975\|Ga0187782_10909873	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300017975\|Ga0187782_11573634	Not Available	519	Open in IMG/M
3300018013\|Ga0187873_1315696	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300018018\|Ga0187886_1316333	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300018018\|Ga0187886_1386680	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300018023\|Ga0187889_10247361	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300018023\|Ga0187889_10428398	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018044\|Ga0187890_10353243	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300018062\|Ga0187784_11518129	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300018085\|Ga0187772_11040174	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300019158\|Ga0184580_100133	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300019192\|Ga0184603_106183	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300019786\|Ga0182025_1203344	All Organisms → cellular organisms → Bacteria → Acidobacteria	2324	Open in IMG/M
3300020581\|Ga0210399_10395415	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300020582\|Ga0210395_10078328	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300020583\|Ga0210401_11270560	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300021170\|Ga0210400_10759971	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300021181\|Ga0210388_11500625	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300021401\|Ga0210393_10462095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1036	Open in IMG/M
3300021402\|Ga0210385_11222867	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300021406\|Ga0210386_10952865	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300021477\|Ga0210398_10186208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1691	Open in IMG/M
3300021477\|Ga0210398_10193304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1658	Open in IMG/M
3300021478\|Ga0210402_10669821	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300022531\|Ga0242660_1119936	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300022532\|Ga0242655_10290536	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300022721\|Ga0242666_1185445	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300022732\|Ga0224569_107705	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300025434\|Ga0208690_1058720	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300025434\|Ga0208690_1078655	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300025612\|Ga0208691_1108798	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300025922\|Ga0207646_11276450	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300026551\|Ga0209648_10196212	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300026557\|Ga0179587_11157031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300027109\|Ga0208603_1034697	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300027559\|Ga0209222_1068710	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300027562\|Ga0209735_1097142	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300027565\|Ga0209219_1160689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	537	Open in IMG/M
3300027568\|Ga0208042_1162092	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300027629\|Ga0209422_1072748	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300027667\|Ga0209009_1107228	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300027692\|Ga0209530_1003370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5671	Open in IMG/M
3300027701\|Ga0209447_10153207	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300027767\|Ga0209655_10046626	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300027803\|Ga0209910_10026641	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300027824\|Ga0209040_10082182	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300027824\|Ga0209040_10136550	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300027884\|Ga0209275_10598047	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300027889\|Ga0209380_10000477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28258	Open in IMG/M
3300027889\|Ga0209380_10166195	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300027895\|Ga0209624_10869765	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300027905\|Ga0209415_10792784	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300028776\|Ga0302303_10298889	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300028789\|Ga0302232_10365775	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300028789\|Ga0302232_10620312	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028863\|Ga0302218_10120184	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300029883\|Ga0311327_10366600	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300029922\|Ga0311363_10093642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4183	Open in IMG/M
3300029943\|Ga0311340_10016212	All Organisms → cellular organisms → Bacteria	9409	Open in IMG/M
3300029944\|Ga0311352_11193708	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300029944\|Ga0311352_11480153	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300029945\|Ga0311330_10242282	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300029986\|Ga0302188_10300763	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300030013\|Ga0302178_10081131	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300030045\|Ga0302282_1339379	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300030057\|Ga0302176_10359302	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300030706\|Ga0310039_10358362	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300030737\|Ga0302310_10215488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1115	Open in IMG/M
3300030738\|Ga0265462_12565215	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300030848\|Ga0075388_10644322	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300030878\|Ga0265770_1012244	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300031236\|Ga0302324_101161911	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031525\|Ga0302326_12448745	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300031708\|Ga0310686_102276264	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031708\|Ga0310686_108334519	All Organisms → cellular organisms → Bacteria → Proteobacteria	4321	Open in IMG/M
3300031708\|Ga0310686_113288559	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031715\|Ga0307476_10562586	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300031754\|Ga0307475_10374059	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300031754\|Ga0307475_10400297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1103	Open in IMG/M
3300032515\|Ga0348332_10809533	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300032515\|Ga0348332_12962251	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300032515\|Ga0348332_14240417	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300032898\|Ga0335072_11357107	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300033888\|Ga0334792_177063	Not Available	523	Open in IMG/M
3300034163\|Ga0370515_0453176	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.50%
Aquatic	Environmental → Aquatic	21.67%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Freshwater	Environmental → Aquatic → Freshwater	21.67%
Peat	Environmental → Terrestrial → Peat	15.00%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.67%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.50%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019158	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019192	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101593922	3300001471	Forest Soil	PNVSIPLSGNFVHSSQNQFGYNFGAGXTRKVPSGXELYAEFRLMHGSANGTTTDVRPITIGVRW*
JGI12635J15846_107772662	3300001593	Forest Soil	IPLSGDFVNSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFTHGSRNGITTDVRPITIGVRW
Ga0062387_1009537602	3300004091	Bog Forest Soil	FTHSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFMHGGANNITTDFRPITIGVRWGK*
Ga0062389_1003727722	3300004092	Bog Forest Soil	ACANVSIPLSGSFTHSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFMHGGANNITTDFRPITIGVRWGK*
Ga0062389_1021164001	3300004092	Bog Forest Soil	SSSLNEFGYNFGGGVARKMPSGVEIYGEYRFLHGSHNGITTDVRPITIGLRW*
Ga0062389_1039609021	3300004092	Bog Forest Soil	RFWEWWGACQNFSVPLNGSFTNSSLNQFGYNIGAGVTRKMPSGVEIYAEYRLMHGSGDHTTTDMRPITIGVRW*
Ga0070707_1016888321	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GFWTWWGACSNVSIPLSGSFVNSSVNQFGYNFGGGVTRKMPSGVEIYAEYRFTHGSHNGITTDVRPITIGVRW*
Ga0070762_108158022	3300005602	Soil	SSLNEFGFDAGGGVTRKMPSGVEVYLEYRLMHGSHNGITTDFRPITIGLRW*
Ga0070764_108693361	3300005712	Soil	PLNGSFATSSLNEFGYNVGAGVARKMPSGVEIYAEYRLMHGTHNNIQTDFRPITVGVRW*
Ga0070766_101859942	3300005921	Soil	TSIPLSGSFVNSSLNQFGYNFGGGVTRKMPSGAEIYIEYRLMHGTSNGITTDFRPITIGFRW*
Ga0099827_100471371	3300009090	Vadose Zone Soil	VDTSQNQFGYNFGAGITRKMPSGVEIYAEYRFTHGSHNGITTDVRPITIGVRW*
Ga0116222_12410781	3300009521	Peatlands Soil	NQFGYNVGAGVTRKMPSGVEIYGEVRIMHGTHNGITTDYRPITIGFRW*
Ga0116222_13469522	3300009521	Peatlands Soil	ACSNSNISVPLSGNFVNSSQNQFGYNLGGGITRKMPSGVEIYAEFRLMHGSHNGITTDMRPITIGFRW*
Ga0116221_15515802	3300009523	Peatlands Soil	SQNQFGYNLGGGITRKMPSGVEIYADFRLMHGSHNGITTDMRPITIGFRW*
Ga0116112_12232692	3300009636	Peatland	VSGDFLHSNQSAFGYNFGAGVTRKMPSGVEIYAEARLTHGKNGNITTDVRPITIGVRW*
Ga0116120_11881432	3300009641	Peatland	GFYEWWGACPSVSIPLSGSFVNSSQNQFGYNVGGGITRKMPSGVEIYAEYRLTHGSANGTTTDVRPITIGVRW*
Ga0116217_109703551	3300009700	Peatlands Soil	SGSFVNSSLNQFGYNVGAGVTRKMPSGVEIYGEVRIMHGTHNGITTDYRPITIGFRW*
Ga0116101_10132011	3300009759	Peatland	NSSQNHFGYNFGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW*
Ga0116101_10469602	3300009759	Peatland	SSQNEFGYNFGGGITRKMPSGVEVYAEYRFVHGSGNNTTTDFRPITIGVRW*
Ga0116219_101538832	3300009824	Peatlands Soil	LSIPLSGSFVNSSQNEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW*
Ga0074045_106371771	3300010341	Bog Forest Soil	PLSGSFVNSSLNEFGYNVGAGVARKMPSGVEIYGEFRLVHGSHNGITTDYRPITIGFRW*
Ga0136449_1008940991	3300010379	Peatlands Soil	ISVPLSGNFVNSSQNQFGYNLGGGIARKMPSGVEIYAEFRLMHGSHNGITTDMRPITIGFRW*
Ga0126361_105021892	3300010876	Boreal Forest Soil	SLNQFGYNVGVGVTRKLPSGVEFYGEGRIMHGTHNGITTDYRPITIGFRW*
Ga0138569_11936692	3300011079	Peatlands Soil	EFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW*
Ga0150983_112580881	3300011120	Forest Soil	QNAFGYNFGGGVTRKMPSGVELYVEYRFTHGSHNGITTDVRPITLGFRW*
Ga0150983_130596391	3300011120	Forest Soil	FSIPLSGNFVNSSLNQFGYNFGAGVTAKTPSGVEFYGEVRLMHGTHNGITTDYRPITIGFRW*
Ga0137395_113004482	3300012917	Vadose Zone Soil	QNQFGYNFGAGVTRKMPSGVEIYAEFRFTHGSHNGITTDVRPITIGLRW*
Ga0181523_101408391	3300014165	Bog	ALSLPLSGSFTSTAQNEFGYYVGAGVTRKMPSGVEVYAEYRLIHGSANGTTTDMRPITIGVRW*
Ga0181523_102345462	3300014165	Bog	SSQNHFGYNVGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITVGVRW*
Ga0181537_100199771	3300014201	Bog	SSVNEFGYNFGAGVTRKMPSGVELYVEYRLTHGSRNGITTDVRPITLGFRW*
Ga0181537_108172542	3300014201	Bog	WGACQNSNYNIPLNGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEFRLMHGSRNNIQTDYRPVTIGFRW*
Ga0182018_107405452	3300014489	Palsa	WGACQNSNFSLPLSNSFVNSSLNEFGYNVGGGVTCKMPSGVEIYGEVRIMHGSHNGITTDYRPITIGFRW*
Ga0182024_121618681	3300014501	Permafrost	DFVNTNQNEFGYNAGGGVARKMPSGVEIYAEYRLMHGNHNSIQTDVRPITIGVRW*
Ga0187801_100555943	3300017933	Freshwater Sediment	NPFWTWWGACPNVSIPLSGNFLNSSLNEFGYNLGAGVTRKMPSGVELYAEFRLTHGSHNNITTDVRPITIGLRW
Ga0187782_109098731	3300017975	Tropical Peatland	WWTGCPSVSIPLSGNFIHESQNALGINAGVGITRKMPSGVELYGEFRLMHGSANGTTTDVRPITLGVRW
Ga0187782_115736341	3300017975	Tropical Peatland	ACLTTNASIPLNNSFTTSSLNEFGYNVGAGITRKMPSGVEIYAEYRLMHGSRTGITTDFRPITIGFRW
Ga0187873_13156962	3300018013	Peatland	SPFWAWWGACTGGVSIPVSGDFLHSNQSAFGYNFGAGVTRKMPSGVEIYAEARLTHGKNGNITTDVRPITIGVRW
Ga0187886_13163332	3300018018	Peatland	GSFVNSSQNQFGYNVGGGITRKMPSGVEIYAEYRLTHGSANGTTTDVRPITIGVRW
Ga0187886_13866802	3300018018	Peatland	FVNSSQNHFGYNFGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW
Ga0187889_102473612	3300018023	Peatland	ACKNFSIPLSGNFTSTSQDQFGYNFGGGVARKMPSGVEIYAEYRFMHGSGNGVTTDFRPITIGVRW
Ga0187889_104283981	3300018023	Peatland	LHSNQSAFGYNFGAGVTRKMPSGVEIYAEARLTHGKNGNITTDVRPITIGVRW
Ga0187890_103532431	3300018044	Peatland	GDFVNSSQNHFGYNVGGGITRKMPSGVEIYAEYRLTHGSGNSTTTDVRPITIGVRW
Ga0187784_115181292	3300018062	Tropical Peatland	YNFGGGVTRKTPSGVEVYAEFRFMHGSGNNVTTDFRPITIGFRW
Ga0187772_110401741	3300018085	Tropical Peatland	WWQGTCFNGSLPLNGHFVNTSQNQFGYNVGAGVARKMPSGVEIYAEFRLMHGSNNGTTTDVRPITVGVRW
Ga0184580_1001331	3300019158	Soil	GDFVNSTVNAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0184603_1061832	3300019192	Soil	WGACRGVSIPVSGDFVNSTVNAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0182025_12033443	3300019786	Permafrost	LSGSFVTANQNEFGYNVGGGVTRKVPSGAEIYLEYRLTHGSANGTTTDTRPITLGVRW
Ga0210399_103954152	3300020581	Soil	FWNWWGACQNYNFGLAISGSFVNSSLNEFGIDGGGGVTRKMPSGVEIYAEWRIMHGSHNGITTDFRPITIGFRW
Ga0210395_100783281	3300020582	Soil	QFGYNFGGGVTRKMPSGVEIYIEYRLMHGTSNGITTDFRPITIGFRW
Ga0210401_112705602	3300020583	Soil	PLNGSFTSSSMNQFGYNIGAGVTRKMPSGVEIYAEYRLMHGSGDHTTTDIRPITIGVRW
Ga0210400_107599712	3300021170	Soil	NSSLPLSGRFTDSSQNQFGYNFGGGVTRKMPSGVELYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0210388_115006251	3300021181	Soil	SRFWEWWGACQNFSVPLNGSFTSSSLNQFGYNIGAGVTRKMPSGVEIYAEYRFMHGSGDHTTTDIRPITIGVRW
Ga0210393_104620951	3300021401	Soil	SIPLSGSFVHSSQNQFGYNFGGGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVR
Ga0210385_112228672	3300021402	Soil	INNNFVNSSQNEFGYNFGGGITRKMPSGVEIYAEYRFVHGSGNNTTTDFRPITIGVRW
Ga0210386_109528652	3300021406	Soil	VNIPLNGSFVHSSQNQFGYNLGAGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0210383_106730721	3300021407	Soil	GVTRKMPSGAEIYIEYRLMHGTSNGITTDFRPITIGFRW
Ga0210398_101862083	3300021477	Soil	LSGDFVNSSQNHFGYNFGGGITRKMPSGVEIYGEYRLTHGSGDGTTTDVRPITIGVRW
Ga0210398_101933043	3300021477	Soil	NVSIPLSGSFVHSSQNQFGYNFGGGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0210402_106698211	3300021478	Soil	SLSPNGSFVNSSLNEFGYNVGAGVAHKMPSGVEIYGEVRIMHGSHNGITTDYRPVTIGFR
Ga0242660_11199362	3300022531	Soil	GYNFGAGVARKFPSGVELYAEYRFMHGSHNGITTDMRPITIGLRW
Ga0242655_102905362	3300022532	Soil	CSNGSIALNGSFVNSTQNAFGYNFGGGVTRKMPSGVEIYVEYRLTHGSHNGVTTDVRPITLGFRW
Ga0242666_11854451	3300022721	Soil	PNVSLPLSGDFVNSSQNHFGYNFGGGITRKMPSGVEIYAEWRIMHGSHNGITTDFRPITIGFRW
Ga0224569_1077052	3300022732	Rhizosphere	YGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0208690_10587201	3300025434	Peatland	CANIPLSGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0208690_10786552	3300025434	Peatland	PNVSLPLSGDFVNSSQNHVGYNVGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW
Ga0208691_11087982	3300025612	Peatland	GDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0207646_112764501	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	NGFWTWWGACSNVSIPLSGSFVNSSVNQFGYNFGGGVTRKMPSGVEIYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0209648_101962121	3300026551	Grasslands Soil	WWGTCFNSSLPLSGKFVNASQNQFGYNFGAGITRKMPSGVEIYAEFRFTHGSHNGITTDVRPITIGLRW
Ga0179587_111570312	3300026557	Vadose Zone Soil	AFWTWWGTCFNSSLPLSGKFVDASQNQFGYNFGGGVTRKMPSGVELYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0208603_10346971	3300027109	Forest Soil	TSNFSIPLSGNFVDSSLNQFGYNVGAGVTRKMPSGVEIYGEFRLMHGSHNGITTDYRPITIGFRW
Ga0209222_10687101	3300027559	Forest Soil	QNEVGYNFGGGITRKTPSGVEIYAEFRLMHGRANNTTTDVRPITIGVRW
Ga0209735_10971421	3300027562	Forest Soil	NVSIPLNGSFVHSSQNQFGYNFGAGVTRKVPSGAEIYAEFRFMHGSANGTTTDVRPITIGVRW
Ga0209219_11606891	3300027565	Forest Soil	VDSSQNQFGYNFGGGVTRKMPSGVELYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0208042_11620922	3300027568	Peatlands Soil	ISVPLSGNFVNSSQNQFGYNLGGGIARKMPSGVEIYAEFRLMHGSHNGITTDMRPITIGFRW
Ga0209422_10727482	3300027629	Forest Soil	SIPLSGDFVNSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFTHGSRNGITTDVRPITIGVR
Ga0209009_11072282	3300027667	Forest Soil	NFNIPLSGSFVNSSLNQFGYNLGGGVTRKMPSGVEIYGEVRLIHGTHNGITTDYRPITIGFRW
Ga0209530_10033701	3300027692	Forest Soil	FFVWWGVCPSVSIPLSGTFTDSSQNQVGYDIGAGITHKMPSGAEIYAEYRLTHGSGYNSTTDVRPITIGVRW
Ga0209447_101532072	3300027701	Bog Forest Soil	GDFVNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLIHGSANHTTTDLRPITIGVRW
Ga0209655_100466262	3300027767	Bog Forest Soil	GSFVNSSLNQFGIDGGGGITRKMPSGVEVYAEWRIMHGSHNGITTDFRPITIGLRW
Ga0209910_100266411	3300027803	Thawing Permafrost	MCIRDSSSIPLSGDFVHSSVNEFGYNFGGGVTRKTPSGVELYVEYRLTHGSRNGITTDVHPITLGFRW
Ga0209040_100821821	3300027824	Bog Forest Soil	NQFGYTFGGGVARKMPSGAEIYLEFRLMHGSHNGITTDVRPITIGFRW
Ga0209040_101365501	3300027824	Bog Forest Soil	TSTSQNQFGYNVGAGVTRKMPSGVEIYAEYRLMHGSGNGVTTDFRPITIGVRW
Ga0209275_105980472	3300027884	Soil	NSSLNEFGFDAGGGVTRKMPSGVEVYLEYRLMHGSHNGITTDFRPITIGLRW
Ga0209380_100004771	3300027889	Soil	AFIPLSGNFVDSSLNQWGYDFAGGVARKMPSGVEIYAEYRLMHGTASNITTDFRPITIGLRW
Ga0209380_101661951	3300027889	Soil	CSNGSIPLNGSFVNSSQNAFGYNFGGGVTRKTPSGVEIYLEYRFTHGSHNGITTDVRPITLGFRW
Ga0209624_108697651	3300027895	Forest Soil	QNQFGYNFGGGVTRKVPSGVELYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0209415_107927842	3300027905	Peatlands Soil	VSLPLSGDFVNSSQNHVGYNVGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW
Ga0302303_102988891	3300028776	Palsa	VDSNQNSFGYNFGAGITRTLPSGVELYLEARLMHGKNSNVTTDVRPITIGVRW
Ga0302232_103657752	3300028789	Palsa	DSSQNEFGYNFGGGITRKMPSGVEIYAEYRFTHGSHSGITTDIRPITIGVRW
Ga0302232_106203122	3300028789	Palsa	NSNQNEFGYNIGAGVARKMPSGVEIYAEYRLMHGSGNNITTDVRPITIGVRW
Ga0302218_101201841	3300028863	Palsa	GYNVGAGVSRKMPSGVEIYGEFRLLHGSHNGITTDYRPITIGFRW
Ga0311327_103666001	3300029883	Bog	VNEFGYNFGGGVTRKTPSGVELYVEYRLTHGSRNGITTDVHPITLGFRW
Ga0311363_100936427	3300029922	Fen	LHSNQSAFGYNFGAGVTRKMPSGVEIYAEARITHGKNGNITTDVRPITIGVRW
Ga0311340_1001621213	3300029943	Palsa	PVSGNFVDSNQNSFGYNFGAGITRTLPSGVELYLEARLMHGKNSNVTTDVRPITIGVRW
Ga0311352_111937082	3300029944	Palsa	NSNFSIPLSGNFNSTVNEFGYNVGAGVSRKMPSGVEIYGEFRLLHGSHNGITTDYRPITIGFRW
Ga0311352_114801532	3300029944	Palsa	FGYNVGAGITRKVPSGAEIYVEYRVTHGTSNSIHTDFRPITIGVRW
Ga0311330_102422821	3300029945	Bog	DFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0302188_103007631	3300029986	Bog	TVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0302178_100811311	3300030013	Palsa	PLSGDFTNSTVNEFGYNIGAGVTRKMPSGVEIYAEFRLMHGSRNNIQTDYRPITIGFRW
Ga0302282_13393792	3300030045	Fen	NQSAFGYNFGAGVTRKMPSGVEIYAEARITHGKNGNITTDVRPITIGVRW
Ga0302176_103593022	3300030057	Palsa	EWWGSCPSVSIPLNGSFVNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLMHGSGNNITTDVRPITIGVRW
Ga0310039_103583621	3300030706	Peatlands Soil	LSIPLSGSFVNSSQNEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW
Ga0302310_102154882	3300030737	Palsa	SFVNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLMHGSGNNITTDVRPITIGVRW
Ga0265462_125652151	3300030738	Soil	FAYDFGGGVTRKFPSGAEMYLEGRIMHGSHNNISTDFRPITLGFRW
Ga0075388_106443221	3300030848	Soil	DSSQNHFGYNVGAGVTRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITLGVRW
Ga0265770_10122442	3300030878	Soil	VNSSLNQFGYDLGGGVAHKMPSGVEIYAEYRLMHGSHNGITTDFHPITMGFRW
Ga0302324_1011619111	3300031236	Palsa	SSFWNWWGACQNSNYNIPLSGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEFRLMHGSRNNIQTDYRPITIGFRW
Ga0302326_124487451	3300031525	Palsa	SNFNIPLSGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0310686_1022762641	3300031708	Soil	DFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITVGFRW
Ga0310686_1083345197	3300031708	Soil	AYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0310686_1132885592	3300031708	Soil	FWTWWGACSSLAIPLNGSFVSSNQNEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW
Ga0307476_105625861	3300031715	Hardwood Forest Soil	PLNGSFVHSSQNQFGYNLGAGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0307475_103740591	3300031754	Hardwood Forest Soil	GYNIGAGVTRKTPSGVEIYLEYRLMHGTINGITTDFRPITIGFRW
Ga0307475_104002972	3300031754	Hardwood Forest Soil	GACSNSSIPLSGSFVHSSVNSFGYNFGGGVTRKMPSGVELYAEYRLTHGSHNGITTDVRPITLGVRW
Ga0348332_108095331	3300032515	Plant Litter	IPVSGDFVNSTVNAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0348332_129622512	3300032515	Plant Litter	FWTWWGACSSLAIPLNGSFVSSSQNQFGYNVGAGVARKMPSGVEIYAEYRLMHGSGNNTTTDIRPITIGVRW
Ga0348332_142404172	3300032515	Plant Litter	FIHAHQNELGYNAGAGVARKMPSGVEIYAEFRLMHGTHNNIQTDVRPITIGVRW
Ga0335072_113571071	3300032898	Soil	FYKWWTGCPSVSIPLSGNFTHSSQNDFGEFVGAGITRKMPSGVELYVEYRLIHGSANETTTDVRPITLGVRW
Ga0334792_177063_54_203	3300033888	Soil	VNQYGYNFGAGVARKMPSGVEIYAEYRFMHGSGDYTTTDFRPIQIGFRW
Ga0370515_0453176_2_172	3300034163	Untreated Peat Soil	SSFVNSSLNEFGYNVGAGVARKMPSGVEIYGEVRIMHGSHNGITTDYRPITIGFRW

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074129

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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