Metagenome Family F074315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074315
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	48 residues
Representative Sequence	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALA
Number of Associated Samples	81
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	84.87 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (63.025 % of family members)
Environment Ontology (ENVO)	Unclassified (63.866 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (88.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 89.58% β-sheet: 0.00% Coil/Unstructured: 10.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02627	CMD	5.04
PF00816	Histone_HNS	5.04
PF05013	FGase	2.52
PF02586	SRAP	2.52
PF02922	CBM_48	2.52
PF13493	DUF4118	1.68
PF09994	DUF2235	1.68
PF03976	PPK2	0.84
PF13460	NAD_binding_10	0.84
PF01165	Ribosomal_S21	0.84
PF01494	FAD_binding_3	0.84
PF07238	PilZ	0.84
PF11896	GlgE_dom_N_S	0.84
PF01068	DNA_ligase_A_M	0.84
PF03695	UPF0149	0.84
PF02826	2-Hacid_dh_C	0.84
PF04545	Sigma70_r4	0.84
PF09948	DUF2182	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	5.04
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	5.04
COG2916	DNA-binding protein H-NS	Transcription [K]	5.04
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.52
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	2.52
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	2.52
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.68
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.84
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.84
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.84
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.84
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.84
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.84
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.84
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.52 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.68 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.68 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	2.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.68 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.68 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000683\|JGI12540J11931_101972	Not Available	538	Open in IMG/M
3300000686\|JGI12494J11907_100863	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300000690\|JGI12582J11924_102826	Not Available	505	Open in IMG/M
3300000703\|JGI12416J11903_101170	Not Available	875	Open in IMG/M
3300000729\|JGI12371J11900_1008779	Not Available	682	Open in IMG/M
3300000734\|JGI12535J11911_1005052	Not Available	1298	Open in IMG/M
3300000734\|JGI12535J11911_1006824	Not Available	1054	Open in IMG/M
3300000935\|JGI12407J12866_102867	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300000935\|JGI12407J12866_107873	Not Available	537	Open in IMG/M
3300009147\|Ga0114129_12459880	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009162\|Ga0075423_12144455	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300010358\|Ga0126370_12050473	Not Available	560	Open in IMG/M
3300016294\|Ga0182041_10206973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1567	Open in IMG/M
3300016294\|Ga0182041_10303407	Not Available	1324	Open in IMG/M
3300016294\|Ga0182041_10522403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300016319\|Ga0182033_10250802	Not Available	1438	Open in IMG/M
3300016341\|Ga0182035_10190126	Not Available	1615	Open in IMG/M
3300016341\|Ga0182035_10412288	Not Available	1137	Open in IMG/M
3300016341\|Ga0182035_11660174	Not Available	577	Open in IMG/M
3300016357\|Ga0182032_10520021	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300016357\|Ga0182032_10622092	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300016371\|Ga0182034_10026731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3542	Open in IMG/M
3300016371\|Ga0182034_10095304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	2116	Open in IMG/M
3300016371\|Ga0182034_10445213	Not Available	1071	Open in IMG/M
3300016371\|Ga0182034_11629028	Not Available	567	Open in IMG/M
3300016387\|Ga0182040_10817104	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300016404\|Ga0182037_10880797	Not Available	775	Open in IMG/M
3300016404\|Ga0182037_12130276	Not Available	504	Open in IMG/M
3300016422\|Ga0182039_10036231	Not Available	3227	Open in IMG/M
3300016422\|Ga0182039_10393895	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300016422\|Ga0182039_10927755	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300016445\|Ga0182038_11140640	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300026692\|Ga0207725_100702	Not Available	1537	Open in IMG/M
3300026692\|Ga0207725_102013	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300026800\|Ga0207742_101922	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300026804\|Ga0207737_103496	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300026809\|Ga0207820_110417	Not Available	713	Open in IMG/M
3300026809\|Ga0207820_111110	Not Available	684	Open in IMG/M
3300026810\|Ga0207801_103681	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300026817\|Ga0207775_104582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300026819\|Ga0207765_105993	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300026833\|Ga0207728_102137	All Organisms → cellular organisms → Bacteria → Proteobacteria	2215	Open in IMG/M
3300026833\|Ga0207728_103429	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300026833\|Ga0207728_107006	Not Available	1093	Open in IMG/M
3300026839\|Ga0207764_105748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300026849\|Ga0207804_104617	Not Available	1352	Open in IMG/M
3300026852\|Ga0207838_101059	All Organisms → cellular organisms → Bacteria → Proteobacteria	2064	Open in IMG/M
3300026854\|Ga0207727_112314	Not Available	811	Open in IMG/M
3300026859\|Ga0207859_1000129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	11174	Open in IMG/M
3300026862\|Ga0207724_1009055	Not Available	926	Open in IMG/M
3300026866\|Ga0207786_102042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1929	Open in IMG/M
3300026871\|Ga0207825_103732	Not Available	1285	Open in IMG/M
3300026871\|Ga0207825_105695	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300026871\|Ga0207825_108322	Not Available	751	Open in IMG/M
3300026872\|Ga0207785_1000431	Not Available	5035	Open in IMG/M
3300026872\|Ga0207785_1007202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1050	Open in IMG/M
3300026879\|Ga0207763_1005662	All Organisms → cellular organisms → Bacteria → Proteobacteria	1370	Open in IMG/M
3300026890\|Ga0207781_1010691	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300026895\|Ga0207758_1003796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1674	Open in IMG/M
3300026896\|Ga0207730_1002277	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300026898\|Ga0207788_1007703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1018	Open in IMG/M
3300026908\|Ga0207787_1011214	Not Available	912	Open in IMG/M
3300026909\|Ga0207858_1000383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5310	Open in IMG/M
3300026921\|Ga0207860_1002511	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300026927\|Ga0207744_1000764	All Organisms → cellular organisms → Bacteria	4711	Open in IMG/M
3300026934\|Ga0207816_1014692	Not Available	1025	Open in IMG/M
3300026934\|Ga0207816_1045229	Not Available	512	Open in IMG/M
3300026941\|Ga0207741_1004420	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300026942\|Ga0207783_1030249	Not Available	535	Open in IMG/M
3300026953\|Ga0207835_1020415	Not Available	851	Open in IMG/M
3300026959\|Ga0207852_1015122	Not Available	813	Open in IMG/M
3300026979\|Ga0207817_1013647	Not Available	907	Open in IMG/M
3300026981\|Ga0207822_1000136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	10789	Open in IMG/M
3300026981\|Ga0207822_1008625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300026981\|Ga0207822_1018226	Not Available	768	Open in IMG/M
3300026982\|Ga0207854_1029346	Not Available	695	Open in IMG/M
3300026997\|Ga0207784_1004246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1709	Open in IMG/M
3300027010\|Ga0207839_1005852	Not Available	1521	Open in IMG/M
3300027010\|Ga0207839_1009711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300027011\|Ga0207740_1018205	Not Available	948	Open in IMG/M
3300027014\|Ga0207815_1000377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	7012	Open in IMG/M
3300027019\|Ga0207857_1007704	Not Available	1911	Open in IMG/M
3300027019\|Ga0207857_1014532	Not Available	1316	Open in IMG/M
3300027019\|Ga0207857_1016391	Not Available	1225	Open in IMG/M
3300027024\|Ga0207819_1020754	Not Available	873	Open in IMG/M
3300027045\|Ga0207726_1007513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1929	Open in IMG/M
3300027049\|Ga0207806_1002507	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300027049\|Ga0207806_1012055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300027063\|Ga0207762_1010666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1660	Open in IMG/M
3300027063\|Ga0207762_1015632	Not Available	1284	Open in IMG/M
3300027063\|Ga0207762_1021661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1031	Open in IMG/M
3300027313\|Ga0207780_1053904	Not Available	686	Open in IMG/M
3300027330\|Ga0207777_1074615	Not Available	592	Open in IMG/M
3300027516\|Ga0207761_1032389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1028	Open in IMG/M
3300027703\|Ga0207862_1006885	All Organisms → cellular organisms → Bacteria	3321	Open in IMG/M
3300027703\|Ga0207862_1090807	Not Available	919	Open in IMG/M
3300027703\|Ga0207862_1176097	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300027703\|Ga0207862_1190937	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300031573\|Ga0310915_10093416	All Organisms → cellular organisms → Bacteria → Proteobacteria	2020	Open in IMG/M
3300031719\|Ga0306917_10334189	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300031771\|Ga0318546_11143840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031833\|Ga0310917_10491112	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031859\|Ga0318527_10215890	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300031890\|Ga0306925_10388358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1497	Open in IMG/M
3300031910\|Ga0306923_10423307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1513	Open in IMG/M
3300031910\|Ga0306923_12442200	Not Available	517	Open in IMG/M
3300031912\|Ga0306921_10902593	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300031912\|Ga0306921_12750579	Not Available	504	Open in IMG/M
3300031942\|Ga0310916_10412045	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300031942\|Ga0310916_11268269	Not Available	607	Open in IMG/M
3300032035\|Ga0310911_10157253	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300032035\|Ga0310911_10176393	All Organisms → cellular organisms → Bacteria → Proteobacteria	1210	Open in IMG/M
3300032039\|Ga0318559_10597072	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300032051\|Ga0318532_10309549	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300032059\|Ga0318533_10953938	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300032091\|Ga0318577_10646365	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300032261\|Ga0306920_100339260	Not Available	2236	Open in IMG/M
3300032261\|Ga0306920_100455373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1901	Open in IMG/M
3300032261\|Ga0306920_104186373	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.32%
Host-Associated	Host-Associated	1.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.32%
Plants	Host-Associated → Plants	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.68%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	63.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	63.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	63.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000683	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60	Environmental	Open in IMG/M
3300000686	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49	Environmental	Open in IMG/M
3300000690	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75	Environmental	Open in IMG/M
3300000703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14	Environmental	Open in IMG/M
3300000729	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35	Environmental	Open in IMG/M
3300000734	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81	Environmental	Open in IMG/M
3300000935	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026692	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 38 (SPAdes)	Environmental	Open in IMG/M
3300026800	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 43 (SPAdes)	Environmental	Open in IMG/M
3300026804	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 2 (SPAdes)	Environmental	Open in IMG/M
3300026809	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)	Environmental	Open in IMG/M
3300026810	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16 (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026852	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 62 (SPAdes)	Environmental	Open in IMG/M
3300026854	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 48 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300026871	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 78 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300026934	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 10 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300026953	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 8 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026982	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 7 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12540J11931_1019721	3300000683	Tropical Forest Soil	MEATDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMX
JGI12494J11907_1008632	3300000686	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANGWFDRRRT
JGI12582J11924_1028262	3300000690	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQ
JGI12416J11903_1011701	3300000703	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDM
JGI12371J11900_10087792	3300000729	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQALANGW
JGI12535J11911_10050524	3300000734	Tropical Forest Soil	MEATDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALA
JGI12535J11911_10068242	3300000734	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDN
JGI12407J12866_1028671	3300000935	Tropical Forest Soil	MEITDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQA
JGI12407J12866_1078731	3300000935	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQT
Ga0114129_124598801	3300009147	Populus Rhizosphere	MKNADFTEQWTAMQKMFLPTSAISAPLRENAQRFWENQDKVLDNMQALANA
Ga0075423_121444551	3300009162	Populus Rhizosphere	MKNTDFTEQWTTMQKMFLPTSAISAPLRENAQRFWENQEKVLDGMQALAN
Ga0126370_120504731	3300010358	Tropical Forest Soil	MNPTDFAEQWSSMQKMFLPTSEVSATFRDNARRFWENQDKLLDSMQALA
Ga0182041_102069731	3300016294	Soil	MSMDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDN
Ga0182041_103034071	3300016294	Soil	MASTDFTEQWSNMQKMFLPSSEISATFRENARQFWENQGKV
Ga0182041_105224032	3300016294	Soil	MSTDFTEQWNNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQAFANDWFDRRR
Ga0182033_102508021	3300016319	Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANGWFDR
Ga0182035_101901264	3300016341	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWEN
Ga0182035_104122881	3300016341	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWENQGKVLDNMQALAN
Ga0182035_116601741	3300016341	Soil	MSTDFSEQWTSMQKMFLPSSEISATFKENARQFWENQGKVLDNMQA
Ga0182032_105200211	3300016357	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALANGWFDRRRTG
Ga0182032_106220921	3300016357	Soil	MSMDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQA
Ga0182034_100267316	3300016371	Soil	MSMDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQALANGWFDRRRTGT
Ga0182034_100953043	3300016371	Soil	MASTDFTEQWSNMQKMFLPSSEISATFRENARQFWENQ
Ga0182034_104452131	3300016371	Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALAN
Ga0182034_116290282	3300016371	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLD
Ga0182040_108171042	3300016387	Soil	MSMDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQAL
Ga0182037_108807971	3300016404	Soil	MSTDFTEQWSDMQKMFLASSEMSASFRESARRFWENQGKLLDNMQALANG
Ga0182037_121302761	3300016404	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQ
Ga0182039_100362314	3300016422	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWENQGKVLDNMQ
Ga0182039_103938951	3300016422	Soil	MSTDFTEQWNNMQKMFLASSEMSASFKESARRFWENQGKLLDDMQALANGWFDRRRTGAH
Ga0182039_109277551	3300016422	Soil	MSTDFTEQWKKLQETFLASSEMSASFRERARRFWENQGKLLDDMQALANGWFDRRR
Ga0182038_111406401	3300016445	Soil	MSTDFTEQWNNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANGWFDRRRTGA
Ga0207725_1007025	3300026692	Tropical Forest Soil	MEATDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANG
Ga0207725_1020131	3300026692	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANG
Ga0207742_1019221	3300026800	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLL
Ga0207737_1034964	3300026804	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFWENQGKVLDNM
Ga0207820_1104171	3300026809	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARRFWE
Ga0207820_1111103	3300026809	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWE
Ga0207801_1036813	3300026810	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFWE
Ga0207775_1045822	3300026817	Tropical Forest Soil	MASTDFTEQWSNMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWF
Ga0207765_1059932	3300026819	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFWENQGKVLDNMQALA
Ga0207728_1021375	3300026833	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWFDRRRT
Ga0207728_1034291	3300026833	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQ
Ga0207728_1070061	3300026833	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQALA
Ga0207764_1057481	3300026839	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQALANGWFDRRRT
Ga0207804_1046171	3300026849	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRENARRFWENQGKVL
Ga0207838_1010593	3300026852	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQ
Ga0207727_1123142	3300026854	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDD
Ga0207859_10001291	3300026859	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESACRFWENQGKLLDDMQA
Ga0207724_10090552	3300026862	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFRENARRFWENQGKVLDN
Ga0207786_1020424	3300026866	Tropical Forest Soil	MEATDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDM
Ga0207825_1037321	3300026871	Tropical Forest Soil	MSTDFTEQWSDMQKMFLASSEMSASFRESARRFWE
Ga0207825_1056951	3300026871	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWFDRR
Ga0207825_1083221	3300026871	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFWENQGKVLDNMQALANGW
Ga0207785_10004311	3300026872	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFW
Ga0207785_10072021	3300026872	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRESARLFWENQGKLLDNMQALANGWFDRRRTGTH
Ga0207763_10056621	3300026879	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANG
Ga0207781_10106912	3300026890	Tropical Forest Soil	MASTDFTEQWSNMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWFD
Ga0207758_10037961	3300026895	Tropical Forest Soil	MEATDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALAN
Ga0207730_10022771	3300026896	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFWENQGKVLDNMQALANGWFDRRRTGT
Ga0207788_10077031	3300026898	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWF
Ga0207787_10112143	3300026908	Tropical Forest Soil	MEATDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANGW
Ga0207858_10003835	3300026909	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEISASFRENARQFWENQGKVLDNMQALANVWFDRRRTGTHAAR
Ga0207860_10025111	3300026921	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALAN
Ga0207744_10007641	3300026927	Tropical Forest Soil	MEITDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALANG
Ga0207816_10146923	3300026934	Tropical Forest Soil	MSMDFTEQWSNMQKMFLQSSEMSASFRESARLFWENQGKVLDNMQALSNG
Ga0207816_10452291	3300026934	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQTLANGWF
Ga0207741_10044205	3300026941	Tropical Forest Soil	METTDFTEQWSNMQKMFLASSEMSASFRENARQFWENQGKVLDNMQALANGWFDRRRT
Ga0207783_10302491	3300026942	Tropical Forest Soil	MSTDFNEQWSNMQKMFLQSSEMSASFRESARQFWEIQGKALDNMQALAN
Ga0207835_10204152	3300026953	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRESARRFWENQGKLLDNMQALANGWF
Ga0207852_10151222	3300026959	Tropical Forest Soil	MSTDFSEQWSNMQKMFLQSSEMSASFRESARLFWENQGKVLDNMQALANVWF
Ga0207817_10136471	3300026979	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLL
Ga0207822_10001366	3300026981	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEISATFRENARQFWENQGKVLDNMQALANDWFERRRTGTHAARE
Ga0207822_10086253	3300026981	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWFDRRRTGT
Ga0207822_10182261	3300026981	Tropical Forest Soil	MEITDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALA
Ga0207854_10293461	3300026982	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARQFWENQGKVL
Ga0207784_10042463	3300026997	Tropical Forest Soil	MSTDFTEQWRKMQEMFLASSEMSASFRESARRFWENQGKLL
Ga0207839_10058521	3300027010	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQALANG
Ga0207839_10097112	3300027010	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRESARRFWENQGKLLDNMQALANG
Ga0207740_10182051	3300027011	Tropical Forest Soil	MSMDFTEQWSNMQKMFLQSSEMSASFRESARLFWENQGKVLDNMQ
Ga0207815_10003771	3300027014	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRESARLFWENQGKVLDNMQALANVW
Ga0207857_10077043	3300027019	Tropical Forest Soil	MSTDFSEQWSNMQKMFLQSSEMSASFRESARLFWENQG
Ga0207857_10145321	3300027019	Tropical Forest Soil	MASTDFTEQWSSMQKMFLPSSEISATFTENARRFWENQ
Ga0207857_10163911	3300027019	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRESARLFWENQG
Ga0207819_10207541	3300027024	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANG
Ga0207726_10075132	3300027045	Tropical Forest Soil	MSTDFTEQWSDMQKMFLASSEMSASFRESARRFWENQ
Ga0207806_10025076	3300027049	Tropical Forest Soil	MSTDFTEQWSNMQKMFLQSSEISASFRENARQFWENQGKVLDNMQALANVWF
Ga0207806_10120551	3300027049	Tropical Forest Soil	MASTDFTEQWSNMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGWFDRRRTGA
Ga0207762_10106661	3300027063	Tropical Forest Soil	MSTDFTEQWSDMQKMFLASSEMSASFRESARRFWENQGKLLDNMQA
Ga0207762_10156323	3300027063	Tropical Forest Soil	MASTDFTEQWSNMQKMFLPSSEISATFTENARRFWENQGKV
Ga0207762_10216612	3300027063	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQA
Ga0207780_10539042	3300027313	Tropical Forest Soil	MSTDFTEQWSDMQKMFLASSEMSASFRESARRFWENQGKLLDN
Ga0207777_10746152	3300027330	Tropical Forest Soil	MASTDFTEQWSNMQKMFLPSSEISATFTENARRFWEN
Ga0207761_10323891	3300027516	Tropical Forest Soil	MSTDFTEQWRKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQA
Ga0207862_10068854	3300027703	Tropical Forest Soil	MSTDFTEQWRKMQEMFLASSEMSASFRESARRFWENQGKLLD
Ga0207862_10908072	3300027703	Tropical Forest Soil	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLD
Ga0207862_11760971	3300027703	Tropical Forest Soil	MASTDFTEQWSNMQKMFLPSSEISATFTENARRFWENQGKVLDNMQALANGW
Ga0207862_11909371	3300027703	Tropical Forest Soil	MSTDFTEQWSNMQKMFLASSEMSASFRENARRFWENQGKVLDNMQALANGWF
Ga0310915_100934165	3300031573	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWENQGKVLDNMQALANGWFDRR
Ga0306917_103341892	3300031719	Soil	MASTDFTEQWSNMQKMFLPSSEISTTFRENARQFWENQGKVLDNMQALANGWFDRRRTG
Ga0318546_111438402	3300031771	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWENQGKVLD
Ga0310917_104911122	3300031833	Soil	MSMDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDNM
Ga0318527_102158901	3300031859	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALANGWFDRRRTGAH
Ga0306925_103883582	3300031890	Soil	MSTDFTEQWNNMQKMFLPSSEISATFRENARQFWENQG
Ga0306923_104233073	3300031910	Soil	MSTDFSEQWTSMQKMFLPSSEISATFKENARQFWENQGKVLDNMQALAN
Ga0306923_124422001	3300031910	Soil	MSTDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDN
Ga0306921_109025931	3300031912	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALA
Ga0306921_127505791	3300031912	Soil	MASTDFTEQWSNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQA
Ga0310916_104120453	3300031942	Soil	MSMDFTEQWNNMQKMFLPSSEISATFRENARQFWE
Ga0310916_112682691	3300031942	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWENQGKVLDNMQA
Ga0310911_101572531	3300032035	Soil	MSTDFTEQWNNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQA
Ga0310911_101763931	3300032035	Soil	MASTDFTEQWSNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQAL
Ga0318559_105970721	3300032039	Soil	MSTDFTEQWSNMQKMFLESSEMSASFRESARRFWENQGKLLDNMQALANGWFDRRS
Ga0318532_103095491	3300032051	Soil	MSTDFTEQWSNMQKMFLASSEMSASFRESARQFWENQGKVLDNMQAFANAWF
Ga0318533_109539381	3300032059	Soil	MSTDFTEQWNNMQKMFLASSEMSASFRESARRFWENQGKLLDDMQALANGWFDRRRTG
Ga0318577_106463651	3300032091	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWENQGKVLDNMQALANGWFDRRRTGTH
Ga0306920_1003392602	3300032261	Soil	MSTDFTEQWSNMQKMFLQSSEMSASFRENARQFWEN
Ga0306920_1004553731	3300032261	Soil	MSTDFTEQWNNMQKMFLPSSEISATFRENARQFWEN
Ga0306920_1041863731	3300032261	Soil	MASTDFTEQWSNMQKMFLPSSEISATFRENARQFWENQGKVLDNMQALANG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences