Metagenome Family F074443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074443
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	70 residues
Representative Sequence	MPDRLVLPAAPQQREVLRQALADAVYYRDPPVQCPACEVLDGLCAQCAAGLARARSYLALGRELGVEVPG
Number of Associated Samples	62
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.15 %
% of genes near scaffold ends (potentially truncated)	14.29 %
% of genes from short scaffolds (< 2000 bps)	63.03 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.706 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (33.613 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00392	GntR	15.97
PF13581	HATPase_c_2	9.24
PF13560	HTH_31	6.72
PF04672	Methyltransf_19	5.04
PF04149	DUF397	2.52
PF03551	PadR	2.52
PF13549	ATP-grasp_5	1.68
PF02371	Transposase_20	1.68
PF03030	H_PPase	1.68
PF13508	Acetyltransf_7	1.68
PF07508	Recombinase	1.68
PF13637	Ank_4	0.84
PF01035	DNA_binding_1	0.84
PF00440	TetR_N	0.84
PF03050	DDE_Tnp_IS66	0.84
PF01927	Mut7-C	0.84
PF01184	Gpr1_Fun34_YaaH	0.84
PF01609	DDE_Tnp_1	0.84
PF01494	FAD_binding_3	0.84
PF02954	HTH_8	0.84
PF04072	LCM	0.84
PF00005	ABC_tran	0.84
PF02780	Transketolase_C	0.84
PF00144	Beta-lactamase	0.84
PF00248	Aldo_ket_red	0.84
PF13883	Pyrid_oxidase_2	0.84
PF01580	FtsK_SpoIIIE	0.84
PF00324	AA_permease	0.84
PF03631	Virul_fac_BrkB	0.84
PF00296	Bac_luciferase	0.84
PF01872	RibD_C	0.84
PF00069	Pkinase	0.84
PF10442	FIST_C	0.84
PF12721	RHIM	0.84
PF12006	DUF3500	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.36
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.52
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.52
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.52
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.68
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.68
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.68
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	1.68
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.84
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.84
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.84
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.84
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.84
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.84
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.84
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.84
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.84
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.84
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	0.84
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.84
COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	Cell cycle control, cell division, chromosome partitioning [D]	0.84
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.84
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.84
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.84
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.84
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.84
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.84
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.84
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.84
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.84
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.84
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.84
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.71 %
Unclassified	root	N/A	35.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.71 %
Unclassified	root	N/A	35.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.71 %
Unclassified	root	N/A	35.29 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.66 %
Unclassified	root	N/A	35.29 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.66 %
Unclassified	root	N/A	35.29 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.42 %
Unclassified	root	N/A	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.29 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.04 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.52 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.68 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.29 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.68 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.68 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.84 %
Corynebacteriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis	0.84 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.84 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.84 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.36 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.84 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.84 %
Fodinicola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola	0.84 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.84 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.84 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.36 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Nonomuraea cypriaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea cypriaca	0.84 %
Fodinicola acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	0.84 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.84 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.84 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.84 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10005240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11207	Open in IMG/M
3300002245\|JGIcombinedJ26739_100301090	Not Available	1488	Open in IMG/M
3300002910\|JGI25615J43890_1071888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300002917\|JGI25616J43925_10242254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300004082\|Ga0062384_101045582	Not Available	586	Open in IMG/M
3300005445\|Ga0070708_100013477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6696	Open in IMG/M
3300005445\|Ga0070708_100015916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6224	Open in IMG/M
3300005445\|Ga0070708_100152993	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300005445\|Ga0070708_100347016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1399	Open in IMG/M
3300005467\|Ga0070706_100037188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4496	Open in IMG/M
3300005467\|Ga0070706_100069485	All Organisms → cellular organisms → Bacteria	3257	Open in IMG/M
3300005467\|Ga0070706_100137439	Not Available	2280	Open in IMG/M
3300005467\|Ga0070706_100609130	Not Available	1015	Open in IMG/M
3300005467\|Ga0070706_100864382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300005471\|Ga0070698_100372948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1359	Open in IMG/M
3300005471\|Ga0070698_100668182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	980	Open in IMG/M
3300005534\|Ga0070735_10262563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1045	Open in IMG/M
3300005591\|Ga0070761_10724866	Not Available	623	Open in IMG/M
3300005602\|Ga0070762_10009981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4745	Open in IMG/M
3300005610\|Ga0070763_10486602	Not Available	704	Open in IMG/M
3300005921\|Ga0070766_10118782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1587	Open in IMG/M
3300005921\|Ga0070766_11314137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300007255\|Ga0099791_10507727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300007982\|Ga0102924_1007011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10434	Open in IMG/M
3300007982\|Ga0102924_1029700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3642	Open in IMG/M
3300010048\|Ga0126373_10169487	Not Available	2092	Open in IMG/M
3300010048\|Ga0126373_10610688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300010360\|Ga0126372_10559287	Not Available	1088	Open in IMG/M
3300010361\|Ga0126378_10097391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2894	Open in IMG/M
3300010379\|Ga0136449_100352806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2642	Open in IMG/M
3300011270\|Ga0137391_10798780	Not Available	778	Open in IMG/M
3300011271\|Ga0137393_11358476	Not Available	600	Open in IMG/M
3300012181\|Ga0153922_1115763	Not Available	616	Open in IMG/M
3300012206\|Ga0137380_10047166	All Organisms → cellular organisms → Bacteria	3955	Open in IMG/M
3300012206\|Ga0137380_10516831	Not Available	1051	Open in IMG/M
3300012207\|Ga0137381_10113819	Not Available	2305	Open in IMG/M
3300012207\|Ga0137381_10650483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300012209\|Ga0137379_10144691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2284	Open in IMG/M
3300012209\|Ga0137379_10312309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1483	Open in IMG/M
3300012211\|Ga0137377_11858402	Not Available	520	Open in IMG/M
3300012357\|Ga0137384_10155621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1913	Open in IMG/M
3300012363\|Ga0137390_10822213	Not Available	886	Open in IMG/M
3300014489\|Ga0182018_10207646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1093	Open in IMG/M
3300014495\|Ga0182015_10793143	Not Available	595	Open in IMG/M
3300017970\|Ga0187783_10157808	Not Available	1671	Open in IMG/M
3300017970\|Ga0187783_11260034	Not Available	533	Open in IMG/M
3300019887\|Ga0193729_1169787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	771	Open in IMG/M
3300020582\|Ga0210395_10680290	Not Available	770	Open in IMG/M
3300021433\|Ga0210391_10784741	Not Available	745	Open in IMG/M
3300021560\|Ga0126371_10023216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5743	Open in IMG/M
3300021560\|Ga0126371_12104316	Not Available	680	Open in IMG/M
3300022557\|Ga0212123_10010581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12946	Open in IMG/M
3300022557\|Ga0212123_10129625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1986	Open in IMG/M
3300025910\|Ga0207684_10024089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5193	Open in IMG/M
3300025910\|Ga0207684_10110410	Not Available	2354	Open in IMG/M
3300025910\|Ga0207684_10240420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1562	Open in IMG/M
3300025910\|Ga0207684_10295808	Not Available	1396	Open in IMG/M
3300025910\|Ga0207684_11439212	Not Available	563	Open in IMG/M
3300025922\|Ga0207646_10045522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3940	Open in IMG/M
3300025922\|Ga0207646_10057471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3476	Open in IMG/M
3300025922\|Ga0207646_10503056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1092	Open in IMG/M
3300026304\|Ga0209240_1029041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2111	Open in IMG/M
3300026304\|Ga0209240_1080365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300026555\|Ga0179593_1203137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea cypriaca	1763	Open in IMG/M
3300026557\|Ga0179587_10023531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3347	Open in IMG/M
3300026557\|Ga0179587_10919314	Not Available	577	Open in IMG/M
3300027505\|Ga0209218_1036918	Not Available	964	Open in IMG/M
3300027619\|Ga0209330_1034738	Not Available	1148	Open in IMG/M
3300027676\|Ga0209333_1000121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43586	Open in IMG/M
3300027681\|Ga0208991_1118778	Not Available	789	Open in IMG/M
3300027889\|Ga0209380_10013725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4648	Open in IMG/M
3300027895\|Ga0209624_10172609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1433	Open in IMG/M
3300027895\|Ga0209624_10415009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300027905\|Ga0209415_10076988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3887	Open in IMG/M
3300028047\|Ga0209526_10052160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2880	Open in IMG/M
3300031708\|Ga0310686_108155445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300031708\|Ga0310686_111450135	Not Available	748	Open in IMG/M
3300031708\|Ga0310686_117140181	Not Available	625	Open in IMG/M
3300031708\|Ga0310686_119604135	Not Available	652	Open in IMG/M
3300031718\|Ga0307474_11011863	Not Available	658	Open in IMG/M
3300031747\|Ga0318502_10784935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300031748\|Ga0318492_10201360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300031751\|Ga0318494_10590781	Not Available	649	Open in IMG/M
3300031781\|Ga0318547_10640204	Not Available	660	Open in IMG/M
3300031896\|Ga0318551_10639531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	615	Open in IMG/M
3300032805\|Ga0335078_10019873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9981	Open in IMG/M
3300032805\|Ga0335078_10067230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5250	Open in IMG/M
3300032805\|Ga0335078_10077442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4849	Open in IMG/M
3300032805\|Ga0335078_10091248	All Organisms → cellular organisms → Bacteria	4416	Open in IMG/M
3300032805\|Ga0335078_10118223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3796	Open in IMG/M
3300032805\|Ga0335078_10156247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3219	Open in IMG/M
3300032805\|Ga0335078_10443408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1688	Open in IMG/M
3300032805\|Ga0335078_10471163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1623	Open in IMG/M
3300032805\|Ga0335078_10476059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1612	Open in IMG/M
3300032805\|Ga0335078_11342804	Not Available	812	Open in IMG/M
3300032805\|Ga0335078_11695856	Not Available	693	Open in IMG/M
3300032892\|Ga0335081_11194898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300032895\|Ga0335074_10004039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20202	Open in IMG/M
3300032895\|Ga0335074_10049630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5781	Open in IMG/M
3300032895\|Ga0335074_10061317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5129	Open in IMG/M
3300032895\|Ga0335074_10102019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3775	Open in IMG/M
3300032895\|Ga0335074_10117283	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300032895\|Ga0335074_10133834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3179	Open in IMG/M
3300032895\|Ga0335074_10148954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2965	Open in IMG/M
3300032895\|Ga0335074_10301099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1832	Open in IMG/M
3300032895\|Ga0335074_10734202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	941	Open in IMG/M
3300032895\|Ga0335074_10814361	Not Available	868	Open in IMG/M
3300032895\|Ga0335074_11198333	Not Available	641	Open in IMG/M
3300032895\|Ga0335074_11524023	Not Available	530	Open in IMG/M
3300032896\|Ga0335075_10129757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3207	Open in IMG/M
3300032896\|Ga0335075_10644210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1035	Open in IMG/M
3300032896\|Ga0335075_10655592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1022	Open in IMG/M
3300032896\|Ga0335075_10955090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300032898\|Ga0335072_10640779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1057	Open in IMG/M
3300032898\|Ga0335072_11416337	Not Available	600	Open in IMG/M
3300033134\|Ga0335073_10014987	All Organisms → cellular organisms → Bacteria	10847	Open in IMG/M
3300033134\|Ga0335073_10108951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3566	Open in IMG/M
3300033134\|Ga0335073_10721879	Not Available	1085	Open in IMG/M
3300033134\|Ga0335073_11774907	Not Available	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.96%
Aquatic	Environmental → Aquatic	4.20%
Fungi	Host-Associated → Fungi	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.36%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Mycelium	Host-Associated → Fungi → Mycelium	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	31.93%
Loam	Environmental → Terrestrial → Soil → Loam	28.57%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	30.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	28.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.20%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_1000524011	3300001593	Forest Soil	MSDAPAVLTAAPQQREMLRQALADAVYYRDPPVQCAACPSPDRLCDQCAAGHERARAYLALSYELGLEAPS*
JGIcombinedJ26739_1003010901	3300002245	Forest Soil	KDTGISDAPAVLTAAPQQRETLRQALADAVYYRDPPLQCDACPSPERLCDQCTAGHERALAYLALSYQLGLEAPL*
JGI25615J43890_10718882	3300002910	Grasslands Soil	MAARLVLPAAPAQREVLRQALADAVYYRDPPAQCPACEVMHGLCADCAAGLARARAYLA
JGI25616J43925_102422542	3300002917	Grasslands Soil	MAARLVLPAAPAQREVLRQALADAVYYRDPPAQCPACEVMHGLCADCAAGLARARAYLALGLQLGVEVPA*
Ga0062384_1010455821	3300004082	Bog Forest Soil	MSNAPAILTAAPPQREILRQALADAVYYRDPPLQCAACPAPDRLCDQCAGGYERARAYLALSYELGLEPPS*
Ga0070708_1000134776	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQPAIILLPAQREILRQALADAVYYRDPPLYCHACEAQDGLCDHCAGGLARARAYLALSRTLGMPEPQ*
Ga0070708_1000159167	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLVLPMPPEQREVLRQALEDAVYYRDPPVQCQACDELDGLCAECEAGLARARAYLDLGRELGLETAR*
Ga0070708_1001529932	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAALVLPQRRELLRQALADAVCYRDPPVHCHVCDTLGRLCDQCAAGLARARAYLALGRELGIEVPP*
Ga0070708_1003470162	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSQVVPLVTREGRELLRQALADAVYYRDPPVHCQACEMLGRLCDQCAAGLDRARAYLALGRELGIDSPH*
Ga0070706_1000371886	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDTTSHHLVPPVPPEQREVLRQALADAVYYSDPPARCAACEAQDALCASCAAGLARARAYLALGRDLGMEVPA*
Ga0070706_1000694855	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAPPVPPERREVLRQALADAVYYRDPPARCRACEEIDRLCDECAAGLARARTYLALGRELGLEAPQ*
Ga0070706_1001374391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAPPVPPDQREILSQALADAVYYRDPPVQCRACDSLDGLCDDCAAGLARGLAYLALGRNLGIEISQ*
Ga0070706_1006091302	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAALVLPQRRELLRQALADAVCYRDPPVHCHVCDTLGRLCDQCAAGQARARAYLALGRELGIEVPP*
Ga0070706_1008643822	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAPPVPPEQREILGQALADAVYYRDPPAQCRACEKLGRLCDECAAGLVRASAYLALGRKLGIEVPQ*
Ga0070698_1003729483	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSLALAVPPGQHEILSQALADAVFYRDPPAQCTTCAVLDRLCDECAAGLARARAYLALGRKLGIEVPP*
Ga0070698_1006681822	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPDLLVPLILPEQRELLRQALDDAINYRDPPVECSSCGAYGELCDACAAGFARARAYVALGRELGVEPPP*
Ga0070735_102625631	3300005534	Surface Soil	PAMPDDLTLIVPSEQRGLLRDALADAVFYRDPPLQCHACDSLDGLCDDCAARLAQARAYLGLSRELGLEASA*
Ga0070761_107248661	3300005591	Soil	PRKDTDMSDAPAALTAAPQQREMLRQALADAVYYRDPPLQCAACPSPDRLCDQCAAGHERARAYLALSYELGLEAPS*
Ga0070762_100099817	3300005602	Soil	MSDAPAALTAAPQQREMLRQALADAVYYRDPPLQCAACPSPDRLCDQCAAGHERARAYLALSYELGLEAPS*
Ga0070763_104866022	3300005610	Soil	MSDAPAVLTAAPQQRETLRQALADAVYYRDPPLQCDACPSPERLCDQCTAGHERALAYLALSYQLGLEAPL*
Ga0070766_101187821	3300005921	Soil	MSQLLLNLAETPEQREVLRQSLADAVYYRDPPVSCPACPTPDHLCEECADGLARARTYLALSRALGLETMPSRHAPTRVGPT*
Ga0070766_113141372	3300005921	Soil	MSDRLAPLVTAERRELLRQALADAVFYRDPPVDCDACDRVDGLCGECAAGLARARAYLDLGE
Ga0099791_105077272	3300007255	Vadose Zone Soil	MAATIALRPDQRAVLAQALADAVSYRDPPVHCPACETPDTLCEACTAGLALARSYLTLGSDLGVPVP*
Ga0102924_10070114	3300007982	Iron-Sulfur Acid Spring	MRPVQPVPPGQRDLLRQALADAVYYRDPPVQCRACEALDRLCDECTAGLARARAYLALGRDLGVDIPA*
Ga0102924_10297004	3300007982	Iron-Sulfur Acid Spring	MPDRLPVPVPAAGQELLRQALADAVYYRDPPLTCAACDASEDLCADCAAGLKRARSYLALGRDLGLDVPA*
Ga0126373_101694872	3300010048	Tropical Forest Soil	MTADTSSDRLAPLAAPGKREVLRQALADAVHYRDPPLECPGCDADGGLCSRCAAGLARARAYLALGHDLGLDVPV*
Ga0126373_106106882	3300010048	Tropical Forest Soil	VQPAIILQPEQREILRQALADAVYYRDPPVYCPACETQQALCEQCAATLARARAYLALSRTLGMHEPR*
Ga0126372_105592872	3300010360	Tropical Forest Soil	MTADTSSDRLAPPAAPGKREVLRQALADAVHYRDPPLECPGCDADGGLCARCAAGLARARAYLALGHDLGLDVPA*
Ga0126378_100973912	3300010361	Tropical Forest Soil	VPPAIILQPEQREILRQALADAVYYRDPPVYCPACETQQALCEQCAATLARARAYLALSRTLGMHEPR*
Ga0136449_1003528064	3300010379	Peatlands Soil	MPDRLAALILPGQREVLRQALADAEYYRDPPVECSACQAQGDELCEACAAGLALARAYLALGRELGMEPSQ*
Ga0137391_107987803	3300011270	Vadose Zone Soil	MSPASQVPPDQRELLRQALADAVYYRDPPVYCPGCEAQGGALCGECAATFARASAYLDLG
Ga0137393_113584761	3300011271	Vadose Zone Soil	MADRLALPVAPAQRDILRQALSDAVYYRDPPARCRACEHLDRLCDECAAGLARARTYLALGRELGLEVPQ*
Ga0153922_11157631	3300012181	Attine Ant Fungus Gardens	MPDRLVLLILPEQREVLRQALSDALYYRDPPLECSSCEAHGELCDACAAELARARAYLAVARELGVEPSP*
Ga0137380_100471667	3300012206	Vadose Zone Soil	MTPASQVPPGQRELLRQALADAVYYRDPPVYCPGCEAQGGTLCGECAATFARASAYLDLGRELGLGTSA*
Ga0137380_105168311	3300012206	Vadose Zone Soil	MSQAPPVLPGQREVLRQALADAVYYRDPPVECPSCEALDRLCDQCAAGLARARAYLALARAFGIAMR*
Ga0137381_101138193	3300012207	Vadose Zone Soil	MNPAPPVPPGQRETLRQALADAVSYRDPPAQCRACEALNGLCDQCAAGLARARTYLALARALGMEVPP*
Ga0137381_106504831	3300012207	Vadose Zone Soil	MQPTIILQPEQREILQQAMADAVYYRDPPVYCDACEALDTLCEECAAGLARASAYLTLSRALGVQEPQ*
Ga0137379_101446915	3300012209	Vadose Zone Soil	MQPTIILQPEQREILQQAMADAVYYRDPPVYCDACEALDTLCEECAAGLARASAYLTLSR
Ga0137379_103123093	3300012209	Vadose Zone Soil	MQYTITLQPEQREILQQALADAVYYRDPLVYCPACDAYDTLCDRCAATLARASAYLALSRTLGMPGSWNAAL*
Ga0137377_118584022	3300012211	Vadose Zone Soil	MSPAPPVPPGQRETLRQALADAVSYRDPPAQCRACEALNGLCDQCAAGLARARTYLALARALGMEVPP*
Ga0137384_101556211	3300012357	Vadose Zone Soil	MTPASQVPPGQRELLRQALADAVYYRDPPVYCPGCEAQGGTLCGECAATFARASAYL
Ga0137390_108222132	3300012363	Vadose Zone Soil	MLPAPAATATVPPEQREILGQALADAVYYRDPPALCRACDALERLCDDCAAGLARASAYLALGRKLGIEVPQ*
Ga0182018_102076462	3300014489	Palsa	MTRKDTTMNQAPTILTAAPEQREVLRQALADAVYYRDPPARCPTCPSPDVLCAECAAGLVRARSYLALGQALGLEAPT*
Ga0182015_107931431	3300014495	Palsa	VTAEQREVLRQALADAVYYRDPPLMCPACQTPDRLCEECATGLARARAYLALSRAFGMEPSPSPFAG
Ga0187783_101578082	3300017970	Tropical Peatland	MSQSLLKLAETPERCDVLRQALADAVYYRDPPVSCAACRLPDQLCEECADGLARARKYLALSRALGLDVVP
Ga0187783_112600342	3300017970	Tropical Peatland	MTQEKDTSMSNAPAVLTAAPQQKETLRQALDDAISYRDPPLQCAACPSPDQLCDQCAAGHERARAYLALSHELGLEPSS
Ga0193729_11697872	3300019887	Soil	MPDRVVLPVAPEQRELLGQALADAVYYRDPPLVCVVCEECGGLCEGCAAGLARARAYLDLRRDLGLEAR
Ga0210395_106802902	3300020582	Soil	MSDAPAALTAAPQQREMLRQALADAVYYRDPPLQCAACPSPDRLCDQCAAGHERARAYLALSYELGLEAPS
Ga0210391_107847412	3300021433	Soil	MSDAPAVPTAARQQREILRQALADAVYYRDPPLQCAACPSPDRLCGQRAAGHERARAYLALSYELGLEAPS
Ga0126371_100232162	3300021560	Tropical Forest Soil	VQPAIILQPEQREILRQALADAVYYRDPPVYCPACETQQALCEQCAATLARARAYLALSRTLGMHEPR
Ga0126371_121043163	3300021560	Tropical Forest Soil	MTADTSSDRLAPLAAPGKREVLRQALADAVHYRDPPLECPGCDADGGLCSRCAAGLARARAYLALGHDLGLDVPV
Ga0212123_1001058112	3300022557	Iron-Sulfur Acid Spring	MRPVQPVPPGQRDLLRQALADAVYYRDPPVQCRACEALDRLCDECTAGLARARAYLALGRDLGVDIPA
Ga0212123_101296253	3300022557	Iron-Sulfur Acid Spring	MPDRLPVPVPAAGQELLRQALADAVYYRDPPLTCAACDASEDLCADCAAGLKRARSYLALGRDLGLDVPA
Ga0207684_100240896	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDTTSHHLVPPVPPEQREVLRQALADAVYYSDPPARCAACEAQDALCASCAAGLARARAYLALGRDLGMEVPA
Ga0207684_101104103	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAPPVPPDQREILSQALADAVYYRDPPVQCRACDSLDGLCDDCAAGLARGLAYLALGRNLGIEISQ
Ga0207684_102404202	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEQREVLRQALEDAVYYRDPPVQCQACDELDGLCAECEAGLARARAYLDLGRELGLETAR
Ga0207684_102958083	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAPPVPPERREVLRQALADAVYYRDPPARCRACEEIDRLCDECAAGLARARTYLALGRELGLEAPQ
Ga0207684_114392122	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMRGMEPTLDPGQREVLAQALADAVSYRDPPLYCRACETQDGLCEQCTAMLARARSYLALSRTLGMPDPQ
Ga0207646_100455223	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAALVLPQRRELLRQALADAVCYRDPPVHCHVCDTLGRLCDQCAAGLARARAYLALGRELGIEVPP
Ga0207646_100574716	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQPAIILLPAQREILRQALADAVYYRDPPLYCHACEAQDGLCDHCAGGLARARAYLALSRTLGMPEPQ
Ga0207646_105030563	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDTTSHHLVPPVPPEQREVLRQALADAVYYSDPPARCAACQAQDALCASCAAGLARARAYLALGRDLGMEVPA
Ga0209240_10290414	3300026304	Grasslands Soil	MPDRLVLPAAPQQREVLRQALADAVYYRDPPVQCPACEVLDGLCAQCAAGLARARSYLALGRELGVEVPG
Ga0209240_10803652	3300026304	Grasslands Soil	MAARLVLPAAPAQREVLRQALADAVYYRDPPAQCPACEVMHGLCADCAAGLARARAYLALGLQLGVEVPA
Ga0179593_12031372	3300026555	Vadose Zone Soil	MPDRVVLPVAPGQREVLRQALEDAVYYRDPPVQCGDCDAVDALCEGCAAGLARARAYLDLGRELGLEAPG
Ga0179587_100235315	3300026557	Vadose Zone Soil	MSPAPAVPPERRDVLRQALADAVYYRDPPAQCRACEELDRLCDECTAGLARARTYLALGRELGLEVPQ
Ga0179587_109193141	3300026557	Vadose Zone Soil	PEQVGMSPAPQVPPAQRELLRQALADAVSYRDPPVYCPACHAHGGALCEPCAATFARASAYLDLGRALGLETPA
Ga0209218_10369181	3300027505	Forest Soil	MPDHPALTVPAEQRALLRDALADAVYYRDPSVACDACEALDGLCDECAAGLARARAYLDLGDELGLELSA
Ga0209330_10347381	3300027619	Forest Soil	RTPPRPGLARKEPAMPDHPALTVPAEQRALLRDALADAVYYRDPPVACDACAALDGLCDECAAGLARARAYLDLGDELGLELSA
Ga0209333_100012140	3300027676	Forest Soil	MSDAPAVLTAAPQQREMLRQALADAVYYRDPPVQCAACPSPDRLCDQCAAGHERARAYLALSYELGLEAPS
Ga0208991_11187783	3300027681	Forest Soil	MTGDTTSDHLAPPVPPERREVLRQALADAVYYRDPPAQCAACEAQDGGPCASCAAGLARARAYLALGRDLGVDVPA
Ga0209380_1001372510	3300027889	Soil	MPDHPALTVPAEQRALLRDALADAVYYRDPPAACDACAALDGLCNECAAGLARARAYLDLGDELGLELSA
Ga0209624_101726093	3300027895	Forest Soil	MSQFPPILAEAEQREVLRQALADAVYYRDPPMWCPACPMPDGLCSECADGLARARTYLALSRALDLEVIP
Ga0209624_104150092	3300027895	Forest Soil	MSDRLAPLVTAEQRELLRQALADAVFYRDPPLNCDACDPIDGLCGGCAAGLARATAYLELVEDLGMQVPT
Ga0209415_100769882	3300027905	Peatlands Soil	MPDRLAALILPGQREVLRQALADAEYYRDPPVECSACQAQGDELCEACAAGLALARAYLALGRELGMEPSQ
Ga0209526_100521603	3300028047	Forest Soil	MTGDTMSGHLAPPVPPEQREVLRQALADAVYYRDPPLECSACEALDGLCASCAAGLARARAYLALGRDLGIDVPA
Ga0310686_1081554452	3300031708	Soil	MSQLPLILAETPERREVLRQALADAVYYRDPPVSCPACPTPDRLCEECADGLARARTYLALSRALGLETIP
Ga0310686_1114501352	3300031708	Soil	MSQLPLILSEAPEQREVLRQALADAVHYRDPPVWCPACPVHDRLCEKCADGLVRARAYLALSRTLGLEMIP
Ga0310686_1171401811	3300031708	Soil	MSQLPLVLAETPEQREVLRQALADAEYYRDPPVSCPACPTPDRLCEECADGLARARTYLALSRELGLEKIP
Ga0310686_1196041352	3300031708	Soil	MSQLLLNLAETPEQREVLRQALADAVYYRDPPVSCPACPTPDQLCEECADGLARARTYLALSRELGLQTIP
Ga0307474_110118631	3300031718	Hardwood Forest Soil	MSAPVALVVPAAQRELLLQALADAVNYRDPPVVCRRCEAQHELCDGCAAGLARALAYLALGRELGVDTLG
Ga0318502_107849352	3300031747	Soil	VTTMPAMITLKPEQHELLAQALADAVHYCDPPVHCPTCLTPDALCDQCAAGLARARSYLNLGSELGVPVPQ
Ga0318492_102013602	3300031748	Soil	VQSAIILQPEQREILRQALADAVYYRDPPVYCPACETQQALCEQCAATLARARAYLALSRTLGMHDPR
Ga0318494_105907811	3300031751	Soil	VCGTSEVLVQSAIILQPEQREILRQALADAVYYRDPPVYCPACETQQALCEQCAATLARARAYLALSRTLGMHDPR
Ga0318547_106402041	3300031781	Soil	TMPPAITLRPGQQAVLAQALADAVCYRDPPVHCPVCPSPDTLCESCAAGLARARAYLALGRELGVPVP
Ga0318551_106395312	3300031896	Soil	MPAMITLKPEQHELLAQALADAVHYCDPPVHCPTCLTPDALCDQCAAGLARARSYLNLGSELGVPVPQ
Ga0335078_100198737	3300032805	Soil	MADRLTWPVASEQHEVLCQALADAVSYRDPPVECLACEMLEAGLCAPCAAGLARARAYLAVRREIENGPPE
Ga0335078_100672302	3300032805	Soil	MSDPLVPLIPAGLREVLCQALADAVSYRDPPLECLDCEQRDELCAVCSAGLAHARAYLALGRALGMDTR
Ga0335078_100774425	3300032805	Soil	MSHAPPLPADQRELLQQALADAVFYCDPPAQCSRCEALDGLCDECAAGLDRARAYLALGRQLGMEVPP
Ga0335078_100912481	3300032805	Soil	MSDHLALIIPARQHRLLRDALTDAVYYSDPPLHCDACNAVDGLCEACEAGLARARAYLDLGRELGVDRAT
Ga0335078_101182232	3300032805	Soil	MSQFPLTLTEVPEQREVLSQALADAVYYRDPPVWCPACPEPDRLCEECADGLARARAYLALSHALGLEMNP
Ga0335078_101562473	3300032805	Soil	MSNAPAILAAAPAQLEILRQALSDAIYYRDPPLYCVACPSPDRLCDECASGHQRARAYLALSYELGLETPS
Ga0335078_104434083	3300032805	Soil	MADRVVLPVAPQQRELLDQALADAVYYRDPPLECVACEESDGLCEECAAGLARARAYLDLRVTLGLQAPVTGAERV
Ga0335078_104711631	3300032805	Soil	MNDATAVLNAAPHQRETLRQALADAVYYRDPPLQCAACTSPDRLCDKCKAGHERALAYLALSQELGLQAPS
Ga0335078_104760591	3300032805	Soil	MPDHPVINVPANQRALLREALADAVFYRDPPVDCDACDALDGLCDQCAAGLARAHAYLGLGRELGMEVSA
Ga0335078_113428042	3300032805	Soil	MSPVPPPLSRKKALLGQALADAVYYQDPPAWCGACETLGGLCDDCAAGLARARAYLALGRELGIDVP
Ga0335078_116958561	3300032805	Soil	MSQFPLFLAEAPEQREVLRQALADAVYYRDPPVWCPACPVPDRLCEECADSLARARAYLALSRTLGLETTP
Ga0335081_111948982	3300032892	Soil	VPPASSAPLVPSGQRELLRRALADAVYYRDPPLRCHACERLGQLCDDCAAGLARARGYLALGRELGIDIPQ
Ga0335074_100040398	3300032895	Soil	VTSEGALALLVPAAQRELLRQALADAVFYRDPPVECRACAGRDELCDACADGLARARGYLALGRALGMDISA
Ga0335074_100496302	3300032895	Soil	MAATLTLRPEQRDLLAQALADAIYYRDPPVHCPACATPDTLCDQCSAGLTRARAYLTLGSELGVPVSP
Ga0335074_100613175	3300032895	Soil	MPVSLALTIPAERRELLRQALADAVYYRDPPVQCDACEALDGLCEQCAAGLARARAYLVLGNELGVKEPT
Ga0335074_101020192	3300032895	Soil	MPDLSSLVPAAQLDVLRQALADAVYYRDPPVHCTACEALDGLCDECSAGLARARAYLNLGRELGVKASA
Ga0335074_101172833	3300032895	Soil	MSTFPVILAAAPAQQEILRQALTDAIYYRDPPLHCSACPSPDRLCGQCASGHERAQAYLTLSYELGLESPA
Ga0335074_101338342	3300032895	Soil	MPDRPVSVVTAPQRELLRQALADAVYYRDPPVQCDACEAADGLCEQCAAGLARARAYLGLGDELGMDVPG
Ga0335074_101489543	3300032895	Soil	MPDRLASLVSPAQRELLRQALADAVFYRDPPLECVACKVRQGLCDQCAAGLARARSYLALGRELGMEASA
Ga0335074_103010993	3300032895	Soil	MSQLPLILAETPEQREVLRQALADAVYYRDPPVSCPACPTPDQLCEECADGLARARTYLTLSRALGLETVP
Ga0335074_107342022	3300032895	Soil	LLTREPDHIPRGALLGKERDTEMSDAPAVLTAAPHQREMLRLALADAIYYRDPPLQCAACPSPDRLCDQCTAGHQRARAYLALSYE
Ga0335074_108143612	3300032895	Soil	MSQFPLILTEAPEQREALRQALADAVYYRDPPVSCRACPSPDRLCEDCADGLARARAYLALSRALGLELMP
Ga0335074_111983332	3300032895	Soil	MSDAPAAVTAAPHQREMLRLALADAIYYRDPPLQCAACPSPDRLCGQCAAEHERARAYLALSYELGLEAPS
Ga0335074_115240231	3300032895	Soil	APTMVTEEQRDVLRRALADAVYYRDPPLNCHACDALEGLCDQCAAGLARARSYLALSRELGIDDQQ
Ga0335075_101297574	3300032896	Soil	MPDRLALPVPAARQELLGQALADAVYYRDPPAQCAACEAADGLCEQCAAGPARARAYLVLGDDLGLEVPA
Ga0335075_106442103	3300032896	Soil	MPQLASLVPPAQREVLRQALADAVYYRDPPVNCDACDGLDGLCEQCSAGLARARAYLHLGRELGVEDPA
Ga0335075_106555922	3300032896	Soil	MPDHLALVPAGQRTLLRDALADAVYYRDPPLRCEACEALDGLCDGCSSGLARARSYLDLGRELGVEVPG
Ga0335075_109550901	3300032896	Soil	MADLFASHVPAAQREVLRQALTDAVYYRDPPVECGVCEAVDGLCEACAAGLACARVYLALDRELDPGLPG
Ga0335072_106407793	3300032898	Soil	MFDRLILIGSVEQREFLRAALADAVFYRDPPLQCNACESLDGLCDDCAAGLARARAYLHLGRELGVEDPA
Ga0335072_114163372	3300032898	Soil	MPDHPPLTVPAGQCALLRDALADAVYYRDPPLNCDACEAMDGLCDACAAGLARARSYLDLGRELGMEVLA
Ga0335073_100149877	3300033134	Soil	MSQLPPILAETPEQREVLRQALADAVYYRDPPVSCPACPTPDQLCEECADGLARARTYLALSRALRLKTIP
Ga0335073_101089513	3300033134	Soil	MAATLTVRPGQRELLAQALADAVHYRDPPVQCTACPTPDILCEQCAAGLARARAYLALISDLGVPVPAS
Ga0335073_107218792	3300033134	Soil	MPGHRTHTVPAEQRALLRDALADAVFYRDPPVDCDACDALDGLCDACAAGLARARAYLALGRALGVDASR
Ga0335073_117749072	3300033134	Soil	MPDHLTLIIPAEQGGLLRDALADAVFYRDPPLHCDACEALDGLCDACTAALTRARAYLDLGRGLGLEISA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences