Metagenome / Metatranscriptome Family F074465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	44 residues
Representative Sequence	GSLFSDRHARPERGIRIWRDVSPLLPAAGFTRLRINALVRVR
Number of Associated Samples	97
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	99.16 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (97.479 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (34.454 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.941 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.43% β-sheet: 0.00% Coil/Unstructured: 78.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00149	Metallophos	0.84
PF07963	N_methyl	0.84
PF00561	Abhydrolase_1	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
All Organisms	root	All Organisms	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
cellular organisms	root	All Organisms → cellular organisms	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002673\|Ga0005480J37268_101069	Not Available	510	Open in IMG/M
3300004100\|Ga0058904_1026639	Not Available	505	Open in IMG/M
3300004102\|Ga0058888_1026060	Not Available	500	Open in IMG/M
3300004116\|Ga0058885_1008337	Not Available	524	Open in IMG/M
3300004117\|Ga0058893_1344005	Not Available	586	Open in IMG/M
3300004119\|Ga0058887_1026812	Not Available	588	Open in IMG/M
3300004130\|Ga0058895_1117000	Not Available	591	Open in IMG/M
3300004131\|Ga0058898_1020472	Not Available	588	Open in IMG/M
3300004131\|Ga0058898_1023094	Not Available	542	Open in IMG/M
3300004134\|Ga0058906_1023395	Not Available	523	Open in IMG/M
3300004136\|Ga0058889_1036134	Not Available	606	Open in IMG/M
3300004500\|Ga0068954_1120493	Not Available	589	Open in IMG/M
3300004631\|Ga0058899_10136089	Not Available	607	Open in IMG/M
3300004631\|Ga0058899_10223198	Not Available	503	Open in IMG/M
3300004785\|Ga0058858_1427179	Not Available	517	Open in IMG/M
3300005363\|Ga0008090_10195129	Not Available	550	Open in IMG/M
3300005363\|Ga0008090_15772203	Not Available	548	Open in IMG/M
3300005640\|Ga0075035_1049897	Not Available	575	Open in IMG/M
3300005650\|Ga0075038_10193920	Not Available	572	Open in IMG/M
3300006050\|Ga0075028_100513644	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300006934\|Ga0080680_1016400	Not Available	559	Open in IMG/M
3300006937\|Ga0081243_1021989	Not Available	543	Open in IMG/M
3300007219\|Ga0075025_1011458	Not Available	588	Open in IMG/M
3300007219\|Ga0075025_1029738	Not Available	515	Open in IMG/M
3300007219\|Ga0075025_1047480	Not Available	539	Open in IMG/M
3300007219\|Ga0075025_1061492	Not Available	588	Open in IMG/M
3300007219\|Ga0075025_1339862	Not Available	550	Open in IMG/M
3300007327\|Ga0075016_1061517	Not Available	553	Open in IMG/M
3300007327\|Ga0075016_1062149	Not Available	564	Open in IMG/M
3300007327\|Ga0075016_1087432	Not Available	574	Open in IMG/M
3300007526\|Ga0075022_1009761	Not Available	501	Open in IMG/M
3300007526\|Ga0075022_1021143	Not Available	592	Open in IMG/M
3300007526\|Ga0075022_1066301	Not Available	586	Open in IMG/M
3300007526\|Ga0075022_1082993	Not Available	542	Open in IMG/M
3300009580\|Ga0115596_1050268	Not Available	563	Open in IMG/M
3300009586\|Ga0115591_1055258	Not Available	562	Open in IMG/M
3300010067\|Ga0127432_144492	Not Available	572	Open in IMG/M
3300010069\|Ga0127467_121456	Not Available	576	Open in IMG/M
3300010076\|Ga0127430_166163	Not Available	561	Open in IMG/M
3300010091\|Ga0127485_1032740	Not Available	564	Open in IMG/M
3300010147\|Ga0126319_1459509	Not Available	570	Open in IMG/M
3300010154\|Ga0127503_10188728	Not Available	584	Open in IMG/M
3300010154\|Ga0127503_10332519	Not Available	540	Open in IMG/M
3300010854\|Ga0126360_1011716	Not Available	595	Open in IMG/M
3300010856\|Ga0126358_1248337	Not Available	577	Open in IMG/M
3300011036\|Ga0138590_111173	Not Available	582	Open in IMG/M
3300011068\|Ga0138599_1077095	Not Available	564	Open in IMG/M
3300011080\|Ga0138568_1034101	Not Available	971	Open in IMG/M
3300011106\|Ga0151489_1610988	Not Available	579	Open in IMG/M
3300019199\|Ga0187789_1220552	Not Available	539	Open in IMG/M
3300019241\|Ga0187793_1425387	Not Available	584	Open in IMG/M
3300019245\|Ga0187791_1125024	Not Available	546	Open in IMG/M
3300019250\|Ga0187790_1058219	Not Available	528	Open in IMG/M
3300019264\|Ga0187796_1562509	Not Available	564	Open in IMG/M
3300019265\|Ga0187792_1104288	Not Available	547	Open in IMG/M
3300019265\|Ga0187792_1321261	Not Available	575	Open in IMG/M
3300021858\|Ga0213852_1481063	Not Available	592	Open in IMG/M
3300021860\|Ga0213851_1027449	Not Available	572	Open in IMG/M
3300021860\|Ga0213851_1512518	Not Available	525	Open in IMG/M
3300021861\|Ga0213853_10193224	Not Available	586	Open in IMG/M
3300021861\|Ga0213853_10506107	Not Available	524	Open in IMG/M
3300021861\|Ga0213853_10857874	Not Available	590	Open in IMG/M
3300021929\|Ga0213845_1207706	Not Available	542	Open in IMG/M
3300021967\|Ga0213848_1035300	Not Available	572	Open in IMG/M
3300021967\|Ga0213848_1141760	Not Available	540	Open in IMG/M
3300022171\|Ga0213857_1039266	Not Available	576	Open in IMG/M
3300022503\|Ga0242650_1019984	Not Available	556	Open in IMG/M
3300022504\|Ga0242642_1067169	Not Available	584	Open in IMG/M
3300022504\|Ga0242642_1072343	Not Available	569	Open in IMG/M
3300022505\|Ga0242647_1029947	Not Available	583	Open in IMG/M
3300022510\|Ga0242652_1049288	Not Available	529	Open in IMG/M
3300022511\|Ga0242651_1032621	Not Available	591	Open in IMG/M
3300022513\|Ga0242667_1044718	Not Available	548	Open in IMG/M
3300022525\|Ga0242656_1074116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300022525\|Ga0242656_1101577	Not Available	564	Open in IMG/M
3300022531\|Ga0242660_1236385	Not Available	516	Open in IMG/M
3300022533\|Ga0242662_10252519	Not Available	573	Open in IMG/M
3300022533\|Ga0242662_10256191	Not Available	570	Open in IMG/M
3300022708\|Ga0242670_1055845	Not Available	573	Open in IMG/M
3300022709\|Ga0222756_1054624	Not Available	606	Open in IMG/M
3300022711\|Ga0242674_1046363	Not Available	587	Open in IMG/M
3300022713\|Ga0242677_1080471	Not Available	525	Open in IMG/M
3300022717\|Ga0242661_1120516	Not Available	566	Open in IMG/M
3300022720\|Ga0242672_1002093	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1782	Open in IMG/M
3300022722\|Ga0242657_1190624	Not Available	562	Open in IMG/M
3300022722\|Ga0242657_1225694	Not Available	528	Open in IMG/M
3300023660\|Ga0247550_100550	Not Available	1003	Open in IMG/M
3300029636\|Ga0222749_10633743	Not Available	585	Open in IMG/M
3300029701\|Ga0222748_1077226	Not Available	615	Open in IMG/M
3300030525\|Ga0210273_1171955	Not Available	555	Open in IMG/M
3300030582\|Ga0210261_1157397	Not Available	573	Open in IMG/M
3300030596\|Ga0210278_1167065	Not Available	552	Open in IMG/M
3300030622\|Ga0265391_10280132	Not Available	546	Open in IMG/M
3300030740\|Ga0265460_12205329	Not Available	579	Open in IMG/M
3300030743\|Ga0265461_13350851	Not Available	541	Open in IMG/M
3300030759\|Ga0265745_1019992	Not Available	580	Open in IMG/M
3300030779\|Ga0075378_11071204	Not Available	555	Open in IMG/M
3300030824\|Ga0265726_105912	Not Available	537	Open in IMG/M
3300030842\|Ga0075404_11586949	Not Available	623	Open in IMG/M
3300030843\|Ga0075392_11137344	Not Available	564	Open in IMG/M
3300030876\|Ga0265730_102711	Not Available	587	Open in IMG/M
3300030886\|Ga0265772_105485	Not Available	570	Open in IMG/M
3300030917\|Ga0075382_11785514	Not Available	575	Open in IMG/M
3300030937\|Ga0138302_1473946	Not Available	513	Open in IMG/M
3300030966\|Ga0075383_11406015	Not Available	615	Open in IMG/M
3300030989\|Ga0308196_1068952	Not Available	519	Open in IMG/M
3300030993\|Ga0308190_1125106	Not Available	588	Open in IMG/M
3300031057\|Ga0170834_100362016	Not Available	624	Open in IMG/M
3300031058\|Ga0308189_10379483	Not Available	578	Open in IMG/M
3300031082\|Ga0308192_1063822	Not Available	575	Open in IMG/M
3300031125\|Ga0308182_1018289	Not Available	584	Open in IMG/M
3300031128\|Ga0170823_16654299	Not Available	580	Open in IMG/M
3300031469\|Ga0170819_13115353	Not Available	638	Open in IMG/M
3300031663\|Ga0307484_113655	Not Available	572	Open in IMG/M
3300034479\|Ga0314785_018098	Not Available	562	Open in IMG/M
3300034652\|Ga0316598_220203	Not Available	539	Open in IMG/M
3300034662\|Ga0314783_122197	Not Available	577	Open in IMG/M
3300034676\|Ga0314801_181252	Not Available	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.79%
Aquatic	Environmental → Aquatic	24.37%
Human	Host-Associated → Human	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.79%
Freshwater	Environmental → Aquatic → Freshwater	23.53%
Sediment	Environmental → Aquatic → Sediment	0.84%
Digestive System	Host-Associated → Human → Digestive System	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	20.17%
Loam	Environmental → Terrestrial → Soil → Loam	10.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.40%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.93%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	20.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.57%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	18.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.40%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	5.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.36%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	3.36%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.52%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.68%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.68%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.68%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.84%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002673	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF129 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004117	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004130	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF226 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004131	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF232 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004134	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004136	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004500	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 46 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006934	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006937	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007219	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007327	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaT_ABR_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009243	Microbial communities of water from Amazon river, Brazil - RCM13	Environmental	Open in IMG/M
3300009580	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009586	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010067	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010069	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010091	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011036	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 82 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011068	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011080	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300019199	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021929	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - DR:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021967	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - AB:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023660	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030525	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO037SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030582	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030779	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030824	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030876	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030886	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005480J37268_1010692	3300002673	Forest Soil	VPSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFSRLRIKALVRVR*
Ga0058904_10266392	3300004100	Forest Soil	VPSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFTRLRINALVRVR*
Ga0058888_10260602	3300004102	Forest Soil	PSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFARLRINALVRVR*
Ga0058885_10083372	3300004116	Forest Soil	FQVTSGSLLSDRHARSERGIRKWRDVSPLLPTAGFRQLRISARVRVCYPSR*
Ga0058893_13440051	3300004117	Forest Soil	VPSDPSGSLFSDRHARPERGIRIWRDVSPLLPAAGFIRLRINALVRAR*
Ga0058887_10268121	3300004119	Forest Soil	VPSDPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFTQLRIDALVRVR*
Ga0058895_11170001	3300004130	Forest Soil	VPSDPLGSLFSDRHARPERGIRLWRDVSPLLLAAGFIRLRINALVRVR*
Ga0058898_10204721	3300004131	Forest Soil	PSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFTRLRIDALVRVR*
Ga0058898_10230941	3300004131	Forest Soil	SLFSDRHARPERGIRRWRDVGPLLPAAGVTRMRINALVRAR*
Ga0058906_10233951	3300004134	Forest Soil	GSLFSDRHARSERGIRIWRDVGPLLPAAGFIRLRINALVRAR*
Ga0058889_10361341	3300004136	Forest Soil	IKMVPSDPSGSLFSDRHARPERGIRMWRDVSPLLPAAGFTRLRINALVRVR*
Ga0068954_11204931	3300004500	Peatlands Soil	VPSDPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFTRLRINALVRVR*
Ga0058899_101360891	3300004631	Forest Soil	MVPSDPSGSLFSDRHARPERGIRVWRDLSPLLPAASFTQLRIKALVRVR*
Ga0058899_102231982	3300004631	Forest Soil	VPSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFARLRINALVRVR*
Ga0058858_14271791	3300004785	Host-Associated	GSLLSDRHARSERGIRNWRNVSPLLPAAGFSQPRISAPVRVCFLFR*
Ga0008090_101951292	3300005363	Tropical Rainforest Soil	VPSDPSNSLFSDRHARSERGIQNGVTLGPLLPAAGFAQLRIEALYPSAIPPW*
Ga0008090_157722032	3300005363	Tropical Rainforest Soil	DRHARSERGIQKQRDVSPLLPAAGFVRLRIIALVRVRDFHFW*
Ga0075035_10498971	3300005640	Permafrost Soil	PSDPSTSSFSDRHARSEHGIRTRCDVGPLLPAAGFGRLRINAPVRVRFFPSR*
Ga0075038_101939201	3300005650	Permafrost Soil	DPSTSSFSDRHARSEHGIRTRCDVGPLLPAAGFGRLRINAPVRARFFPSR*
Ga0075028_1005136442	3300006050	Watersheds	MVPSDPSGSLLPDRHARSERGIRSARDVSPSLPAAALTRLRIIAPVR
Ga0080680_10164001	3300006934	Tropical Rainforest Soil	SLLPDRHARSERGIQKQRDVSPLLPATGFVRLRIIALVRVRDFCFW*
Ga0081243_10219891	3300006937	Tropical Rainforest Soil	DRHARSERGIQKRRDVSPLLPAAGFARLRIVALVRVR*
Ga0075025_10114581	3300007219	Watersheds	DPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFIRLRIKALVRVR*
Ga0075025_10297381	3300007219	Watersheds	PSDPSGSLFSDRHARPERGIRVWRDLSPLLPAAGFIQLRIKALVRIR*
Ga0075025_10474801	3300007219	Watersheds	FSDRHARPERGSQQRRDVSPLLPAAGFARLRIDALVRARARY*
Ga0075025_10614921	3300007219	Watersheds	SDPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFTRLRIDALVRVR*
Ga0075025_13398621	3300007219	Watersheds	VPSDPSGSLFSDRHARPERGIRIWRDVSPLLPAAGFVRLRIEALVRVR*
Ga0075016_10615171	3300007327	Watersheds	RHARPERGIRIWRDVSPLLPAAGFTRLRINALVRVR*
Ga0075016_10621492	3300007327	Watersheds	SDRHARPERGIRMWRDGSPLLPAAGFIQLRIKALVRVR*
Ga0075016_10874321	3300007327	Watersheds	VPSDPSGSLFSDRHARPERGIRIWRDVSPLLPAAGFIQLRIDALVRVR*
Ga0075022_10097611	3300007526	Watersheds	PSGSLFSSRHARPERGIQKWCHVGPLLPAAGFIRLRINALVHIR*
Ga0075022_10211431	3300007526	Watersheds	VPSDPSGSLFSDRHARPERGIQRWCDVGPLLPAAGFIRLRINALVHIR*
Ga0075022_10663011	3300007526	Watersheds	VPSDPSGSLFSDRHARPERGIRIWRDVSPLLPAAGFVRLRINALVRVR*
Ga0075022_10829931	3300007526	Watersheds	SDRHARPERGIRIWRDVSPLLPAAGFTRLRIDALVRVR*
Ga0103860_101277341	3300009243	River Water	PSDPSVSSFPGRHARPEHGIQNLRDVSPSLPAAGFARLRISAPVRACNLFR*
Ga0115596_10502681	3300009580	Wetland	LFSDLHARSERGIRNVVTFCPLLPAAGFARLQIIALVRVRSPFR*
Ga0115591_10552581	3300009586	Wetland	RMFSDLHARSERGIRNVVTFCPLLPAAGFARLRIIALVRVRTTFR*
Ga0127432_1444921	3300010067	Grasslands Soil	GSLFSDRHARSERGIRESRDVSPLLPAAGFIRLRINALVRVR*
Ga0127467_1214561	3300010069	Grasslands Soil	DPSGSLFSDRHARSERGIRESRDVSPLLPAAGFIRLRINALVRVR*
Ga0127430_1661631	3300010076	Grasslands Soil	LFSDRHARSERGIRESRDVSPLLPAAGFIRLRINALVRVR*
Ga0127485_10327402	3300010091	Grasslands Soil	FSDRHARSERGIRESRDVSPLLPAAGFIRLRINALVRVR*
Ga0126319_14595091	3300010147	Soil	GNLFSDRHARPEHGIRESRDVSPLLPGVGFVRRRIDV*
Ga0127503_101887281	3300010154	Soil	SDPSGSLFSDRHARPERGIRVRRDVGPLLPAAGFIRLRIDALVRVR*
Ga0127503_103325191	3300010154	Soil	HAQPERGIRIWRDVCPLLPAAGFIRLRIDALVRVR*
Ga0126360_10117161	3300010854	Boreal Forest Soil	VPSDPLGSLFSDRHARPERGIRRWRDVSPLLLAAGFIRLRINALVRVR*
Ga0126358_12483371	3300010856	Boreal Forest Soil	SGSLLSDRHARSERGIRNWRDVSPLLPAAGFRQLRINVQVRVC*
Ga0138590_1111731	3300011036	Peatlands Soil	SGSLFSDRHARPERGIRIWRDLSPLLPAAGFTRLRINALVRVR*
Ga0138599_10770951	3300011068	Peatlands Soil	SDRHARPERGIRIWRDVSPLLPAAGFTRPRIDALVRVR*
Ga0138568_10341011	3300011080	Peatlands Soil	VPSDPSNSLFSDRHARPERGIRIWRDVSPLLPAAGFTRPRIDALVRVR*
Ga0151489_16109881	3300011106	Soil	GSLFPDRHARSERGIRIWRDVSPLLPAAGFGQLRIGALVRVCFLLQ*
Ga0187789_12205521	3300019199	Peatland	PSGSLFSDRHARSERGIRRWRDLSPLLPAAGFARLRINALVRVR
Ga0187793_14253871	3300019241	Peatland	LVNSLFSDRHARPEHGIRDDVTLAPLLPATDFIQLRINALGLVRDLFR
Ga0187791_11250241	3300019245	Peatland	DPSASLLPDRHARSERGIQKQRDVGPLLPAAGFARLRINALVRVRGFRFW
Ga0187790_10582191	3300019250	Peatland	FSGRHARPERGIRRWRDVSPLLPAAGFARLRIDALVRVR
Ga0187796_15625091	3300019264	Peatland	RHAQSERGSRKERDVSPLLPAAGIARLRIDALVRVR
Ga0187792_11042882	3300019265	Peatland	LFSGRHARPERGIRRWRDVSPLLPAAGFARLRIDALVRVR
Ga0187792_13212611	3300019265	Peatland	LFSDRHARSERGIRRWRDVSPLLPAAGFDRLRIDALVRVR
Ga0213852_14810631	3300021858	Watersheds	MVPSDPSGSLFSDRHARPERGIRIWRDVSPLLPAAGVVRLRIDALVRVR
Ga0213851_10274491	3300021860	Watersheds	GSLFSDRHARPERGIRIWRDVGPLLPAAGFIQLRINALVRVR
Ga0213851_15125181	3300021860	Watersheds	LFSDRHARPERGIRIWRDLSPLLPAAGFIRLRIKALVRVR
Ga0213853_101932241	3300021861	Watersheds	SGSLFSDRHARPERGIRVWRDLSPLLPAAGFIQLRIKELVRIR
Ga0213853_105061071	3300021861	Watersheds	SDRHARPERGIRIWRDVSPLLPAAGFTRLRISALVRVR
Ga0213853_108578741	3300021861	Watersheds	VPSDPSGSLFSDRHARPERGIRIWRDVSPLLPAAGFVRLRIEALVRVR
Ga0213845_12077061	3300021929	Watersheds	SDPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFIRLRIKALVRVR
Ga0213848_10353002	3300021967	Watersheds	GSLFSDRHARPERGIRIWRDVSPLLPAAGFTRLRINALVRVR
Ga0213848_11417602	3300021967	Watersheds	GSLFSDRHARPERGIRVWRDLSPLLPAAGFIQLRIKALVRIR
Ga0213857_10392662	3300022171	Watersheds	SGSLFSSRHARPERGIQKWCDVGPLLPAAGFIRLQINALVHIR
Ga0242650_10199841	3300022503	Soil	LGSLFSDRHARPERGIRLWRDVSPLLLAAGFIRLRINALVRVR
Ga0242642_10671691	3300022504	Soil	DPSGSLFSDRHARPERGIRMWRDVSPLLPAAGFTRLRLNALVRVR
Ga0242642_10723431	3300022504	Soil	GSLFSDRHARSERGIQNGGDVSPLLLAAGFGQQRISAQVRVCSLFR
Ga0242647_10299471	3300022505	Soil	SDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFTRLRIDALVRVR
Ga0242652_10492881	3300022510	Soil	LFSDRHARSERGIRILRDVGPLLPAAGFSRLRITALVRVR
Ga0242651_10326211	3300022511	Soil	SDPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFTRLRIDALVRVR
Ga0242667_10447181	3300022513	Soil	RHARSERGIRIWRDVGPLLPAAGFSRLRIKALVRVR
Ga0242656_10741161	3300022525	Soil	GSLFSDRHARPERGIRIRRDLSPLLPAAGFTRLQIDALVRVR
Ga0242656_11015771	3300022525	Soil	PSDPSGSLFSDRHARPERGIRMWRDVSPLLPAAGFTRLRINALVRVR
Ga0242660_12363851	3300022531	Soil	DPLGSLFSDRHARPERGIRIWRDVSPLLPAAGFTRLRINALVRVRYPYR
Ga0242662_102525191	3300022533	Soil	LSGSLFSDRHARSERGIQNGGDVGPLLLAAGFRQQRISAQVRVRSLFR
Ga0242662_102561911	3300022533	Soil	HARPERGIRVWRDLSPLLPAASFTQLRIKALVRVR
Ga0242670_10558451	3300022708	Soil	FSDRHARPERGIRVWRDLSPLLPAASFTQLRIKALVRVR
Ga0222756_10546241	3300022709	Soil	RQIPSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFSRLRIKALVRVR
Ga0242674_10463631	3300022711	Soil	PSDPLGSLFSDRHARPERGIRLWRDVSPLLLAAGFIRLRINALVRVR
Ga0242677_10804711	3300022713	Soil	HARPERGIRRWRDVGPLLPAAGVTRMRINALVRAR
Ga0242661_11205161	3300022717	Soil	DPSGSLFSDRHARSERGIRMWRDVSPLLPAAGFTRLRINALVRVR
Ga0242672_10020932	3300022720	Soil	VPSDPSGSLFSDRHARPERGIQRWCDVGPLLPAAGFIRLRINALVHIR
Ga0242657_11906241	3300022722	Soil	SLFSDRHARSERGIRILRDVGPLLPAAGFARLRIDALVRVR
Ga0242657_12256942	3300022722	Soil	SGSLFSDRHARPERGIRVWRDLSPLLPAAGFIQLRIKALVRIR
Ga0247550_1005501	3300023660	Soil	PSDPSGSLFSDRHARPERGIRIWRDLSPLLPAAGFTRLRINALVRVR
Ga0222749_106337431	3300029636	Soil	DPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFSRLRIKALVRVR
Ga0222748_10772261	3300029701	Soil	MEMVPSDPSNSLFSDRHARPERGIRRWRDVGPLLPAAGVTRMRINALVRAR
Ga0210273_11719551	3300030525	Soil	SLFSDRHARPERGIRIWRDLSPLLPAAGFTRLRINALVRVR
Ga0210261_11573971	3300030582	Soil	FSDRHARSERGIRIWRDVGPLLPAAGFARLRIDALVRVR
Ga0210278_11670651	3300030596	Soil	FSDRHARPERGIRIWRDLSPLLPAAGFTRLRINALVRVR
Ga0265391_102801321	3300030622	Soil	SDRHARSERGIRIWRDVGPLLPAAGFARLRIDALVRVR
Ga0265460_122053291	3300030740	Soil	LFSDRHARSERGIRIWRDVGPLLPAAGFARLRIDALVRVR
Ga0265461_133508511	3300030743	Soil	RHARSERGIRIWRDVGPLLPAAGFIRLRINALVRAR
Ga0265745_10199921	3300030759	Soil	SDPSGSLFSDRHARSERGIRIWRDVSPLLPAAGFIRLRINALVRAR
Ga0075378_110712041	3300030779	Soil	SDRHARSERGIRIWRDVSPLLPAAGFARLRINALVRVR
Ga0265726_1059121	3300030824	Soil	SGSLFSDRHARSERGIRIWRDVGPLLPAAGFIRLRINALVRAR
Ga0075404_115869491	3300030842	Soil	LFINIFYSLMVPSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFSQLRIKALVRVR
Ga0075392_111373441	3300030843	Soil	DRHARSERGIRIWRDVGPLLPAAGFGRLRINALVRVR
Ga0265730_1027111	3300030876	Soil	LSDPSGSLFSDRHARSERGIRIWRDVGPLLPAAGFIRLRINALVRAR
Ga0265772_1054851	3300030886	Soil	GSLFSDRHARSERGIRIWRDVSPLLPAAGFIRLRINALVRAR
Ga0075382_117855141	3300030917	Soil	GSLFSSGHAPPERGIRRWRDICPLLPAAGFIRLRINALVRVR
Ga0138302_14739461	3300030937	Soil	HARSERGIRIWRDVSPLLPAAGFARLRINALVRVR
Ga0075383_114060151	3300030966	Soil	FFMVPSDPLGSLFSSGHAPPERGIRRWRDICPLLPAAGFIRLRINALVRVR
Ga0308196_10689521	3300030989	Soil	PSDPSGSLFSDRHARSEPGIRELRDVSPLLPAAGFIRLRINALVRVR
Ga0308190_11251061	3300030993	Soil	VPSDPSGSLFSDRHARSERGIRELRDVSPLLPAAGFIRLRINALVRVR
Ga0170834_1003620161	3300031057	Forest Soil	LFFKLIVILMVPSDPLGSLFSSGHAPPERGIRRWRDICPLLPAAGFIRLRINALVRVR
Ga0308189_103794831	3300031058	Soil	SDPSGSLFSDRHARSERGIRELRDVSPLLPAAGFIRLRINALVRVR
Ga0308192_10638221	3300031082	Soil	GSLFSDRHARSERGIRIWRNVSPLLPAAGFGQLRISAQVRVRVHFR
Ga0308182_10182891	3300031125	Soil	SDPSGSLFSDRHARSERGIRESRDVSPLLPAAGFIRLRINALVRVR
Ga0170823_166542991	3300031128	Forest Soil	LGSLFSSGHAPPERGIRRWRDICPLLPAAGFIRLRINALVRVR
Ga0170819_131153531	3300031469	Forest Soil	KKLTFFYSLVMIPSDPSGSLFSSGHAPPERGIRRWRDICPLLPAAGFIRLRINALVRVR
Ga0307484_1136552	3300031663	Hardwood Forest Soil	GSLFSDRHARSERGIRIWRDVGPLLPAAGFSRLRIKALVRVR
Ga0314785_018098_425_562	3300034479	Soil	RLFSDLHARSERGIRNVVTFCPLLPAAGFARLRIIALVRVRTTLR
Ga0316598_220203_416_538	3300034652	Untreated Peat Soil	SFSDLHARSELGIRNVRDVSPLLPAAGFIQLRIVALVRVR
Ga0314783_122197_3_149	3300034662	Soil	LPDRLFSDLHARSERGIRNVVTFCPLLPAAGFARLRIIALVRVRTTLR
Ga0314801_181252_412_528	3300034676	Soil	ARSERGIRNWRDVSPLLPAAGFSQLRISALVRVCFPFQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences