Metagenome Family F074489

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074489
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	74 residues
Representative Sequence	SLTARTAWSKDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWRKQA
Number of Associated Samples	77
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.39 %
% of genes near scaffold ends (potentially truncated)	90.76 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (70.588 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.773 % of family members)
Environment Ontology (ENVO)	Unclassified (54.622 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.025 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 45.36% Coil/Unstructured: 54.64%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
b.30.5.4: Galactose mutarotase-like	d1z45a1	1z45	0.79
b.30.5.4: Galactose mutarotase-like	d1lura_	1lur	0.78
b.30.5.4: Galactose mutarotase-like	d1nsza1	1nsz	0.76
b.30.5.0: Galactose mutarotase-like	d4rnla_	4rnl	0.75
f.4.3.1: Porins	d2fgra_	2fgr	0.74

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01425	Amidase	3.36
PF00440	TetR_N	1.68
PF13424	TPR_12	1.68
PF03976	PPK2	0.84
PF13561	adh_short_C2	0.84
PF00873	ACR_tran	0.84
PF12680	SnoaL_2	0.84
PF07691	PA14	0.84
PF13610	DDE_Tnp_IS240	0.84
PF00174	Oxidored_molyb	0.84
PF03050	DDE_Tnp_IS66	0.84
PF13387	DUF4105	0.84
PF08803	ydhR	0.84
PF03150	CCP_MauG	0.84
PF12770	CHAT	0.84
PF13280	WYL	0.84
PF00392	GntR	0.84
PF01497	Peripla_BP_2	0.84
PF04679	DNA_ligase_A_C	0.84
PF01548	DEDD_Tnp_IS110	0.84
PF04014	MazE_antitoxin	0.84
PF00171	Aldedh	0.84
PF14224	DUF4331	0.84
PF03734	YkuD	0.84
PF08808	RES	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.36
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.84
COG0614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.84
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.84
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.84
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.84
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.84
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.84
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.84
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
All Organisms	root	All Organisms	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
cellular organisms	root	All Organisms → cellular organisms	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.52 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.68 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.68 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.84 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.84 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.84 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.84 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.68 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.84 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.84 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.84 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.84 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.84 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.84 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.68 %
Cohnella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella	0.84 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.84 %
Mesorhizobium prunaredense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	0.84 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.84 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	0.84 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.84 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.68 %
Variovorax sp. YR216	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	0.84 %
Cohnella faecalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella → Cohnella faecalis	0.84 %
Opitutaceae bacterium EW11	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium EW11	0.84 %
Mesorhizobium prunaredense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	0.84 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.84 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.84 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101064988	Not Available	578	Open in IMG/M
3300000955\|JGI1027J12803_108253259	Not Available	609	Open in IMG/M
3300001867\|JGI12627J18819_10119952	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300002906\|JGI25614J43888_10134048	Not Available	652	Open in IMG/M
3300005332\|Ga0066388_108004903	Not Available	528	Open in IMG/M
3300005435\|Ga0070714_100578475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1077	Open in IMG/M
3300005439\|Ga0070711_101924779	Not Available	520	Open in IMG/M
3300005602\|Ga0070762_10426490	Not Available	859	Open in IMG/M
3300005712\|Ga0070764_11008750	Not Available	525	Open in IMG/M
3300005764\|Ga0066903_103165666	Not Available	890	Open in IMG/M
3300005764\|Ga0066903_104128486	Not Available	778	Open in IMG/M
3300006893\|Ga0073928_10009416	All Organisms → cellular organisms → Bacteria	11910	Open in IMG/M
3300006893\|Ga0073928_10105856	All Organisms → cellular organisms → Bacteria → Acidobacteria	2349	Open in IMG/M
3300006893\|Ga0073928_10709919	Not Available	701	Open in IMG/M
3300009098\|Ga0105245_13288111	Not Available	500	Open in IMG/M
3300009101\|Ga0105247_10801804	Not Available	719	Open in IMG/M
3300010048\|Ga0126373_12160082	Not Available	618	Open in IMG/M
3300010360\|Ga0126372_11345085	Not Available	745	Open in IMG/M
3300010373\|Ga0134128_10713130	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1114	Open in IMG/M
3300010376\|Ga0126381_101754383	Not Available	896	Open in IMG/M
3300010398\|Ga0126383_13128298	Not Available	540	Open in IMG/M
3300011392\|Ga0153987_1027703	Not Available	535	Open in IMG/M
3300012202\|Ga0137363_10395824	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300012984\|Ga0164309_10399035	Not Available	1025	Open in IMG/M
3300013025\|Ga0157367_1153541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	901	Open in IMG/M
3300014968\|Ga0157379_11470245	Not Available	662	Open in IMG/M
3300016270\|Ga0182036_10170010	Not Available	1571	Open in IMG/M
3300016294\|Ga0182041_10594755	Not Available	971	Open in IMG/M
3300016319\|Ga0182033_10551790	Not Available	996	Open in IMG/M
3300016341\|Ga0182035_12102646	Not Available	513	Open in IMG/M
3300016357\|Ga0182032_10553601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	952	Open in IMG/M
3300016357\|Ga0182032_10728068	Not Available	834	Open in IMG/M
3300016357\|Ga0182032_12030197	Not Available	505	Open in IMG/M
3300016371\|Ga0182034_10842286	Not Available	786	Open in IMG/M
3300016371\|Ga0182034_11362520	Not Available	620	Open in IMG/M
3300016371\|Ga0182034_11484752	Not Available	594	Open in IMG/M
3300016371\|Ga0182034_11933183	Not Available	521	Open in IMG/M
3300016387\|Ga0182040_11120256	Not Available	660	Open in IMG/M
3300016387\|Ga0182040_11159352	Not Available	649	Open in IMG/M
3300016404\|Ga0182037_10571381	Not Available	956	Open in IMG/M
3300016422\|Ga0182039_10317026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1298	Open in IMG/M
3300016422\|Ga0182039_10848385	Not Available	813	Open in IMG/M
3300016422\|Ga0182039_11153583	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300016445\|Ga0182038_10904547	Not Available	778	Open in IMG/M
3300016445\|Ga0182038_11658065	Not Available	576	Open in IMG/M
3300017970\|Ga0187783_10264286	Not Available	1257	Open in IMG/M
3300017970\|Ga0187783_10762982	Not Available	698	Open in IMG/M
3300017972\|Ga0187781_10834460	Not Available	670	Open in IMG/M
3300020579\|Ga0210407_11466587	Not Available	504	Open in IMG/M
3300020580\|Ga0210403_10318002	Not Available	1275	Open in IMG/M
3300021088\|Ga0210404_10853349	Not Available	521	Open in IMG/M
3300021178\|Ga0210408_10892122	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300021361\|Ga0213872_10095928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium EW11	1324	Open in IMG/M
3300021372\|Ga0213877_10062730	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300021401\|Ga0210393_10576326	Not Available	919	Open in IMG/M
3300021403\|Ga0210397_10398630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300021405\|Ga0210387_11567726	Not Available	562	Open in IMG/M
3300021405\|Ga0210387_11792714	Not Available	517	Open in IMG/M
3300021439\|Ga0213879_10029898	Not Available	1363	Open in IMG/M
3300021444\|Ga0213878_10100638	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300021475\|Ga0210392_10364376	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300021475\|Ga0210392_10872849	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300021560\|Ga0126371_10827937	Not Available	1071	Open in IMG/M
3300021560\|Ga0126371_11706096	Not Available	753	Open in IMG/M
3300021560\|Ga0126371_12128628	Not Available	676	Open in IMG/M
3300021560\|Ga0126371_13123799	Not Available	560	Open in IMG/M
3300025910\|Ga0207684_11028619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300025928\|Ga0207700_10824676	Not Available	830	Open in IMG/M
3300027548\|Ga0209523_1011836	Not Available	1625	Open in IMG/M
3300027548\|Ga0209523_1079294	Not Available	678	Open in IMG/M
3300027855\|Ga0209693_10039240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	2324	Open in IMG/M
3300030007\|Ga0311338_11471682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella → Cohnella faecalis	630	Open in IMG/M
3300031546\|Ga0318538_10167452	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300031573\|Ga0310915_10234751	Not Available	1289	Open in IMG/M
3300031573\|Ga0310915_10609786	Not Available	773	Open in IMG/M
3300031668\|Ga0318542_10534993	Not Available	610	Open in IMG/M
3300031679\|Ga0318561_10838703	Not Available	505	Open in IMG/M
3300031719\|Ga0306917_10087190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2208	Open in IMG/M
3300031719\|Ga0306917_10271429	Not Available	1304	Open in IMG/M
3300031719\|Ga0306917_10806336	Not Available	736	Open in IMG/M
3300031719\|Ga0306917_11058877	Not Available	632	Open in IMG/M
3300031768\|Ga0318509_10177862	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300031793\|Ga0318548_10289498	Not Available	805	Open in IMG/M
3300031833\|Ga0310917_10707058	Not Available	682	Open in IMG/M
3300031879\|Ga0306919_11012385	Not Available	635	Open in IMG/M
3300031879\|Ga0306919_11089545	Not Available	609	Open in IMG/M
3300031890\|Ga0306925_10059864	All Organisms → cellular organisms → Bacteria	3989	Open in IMG/M
3300031890\|Ga0306925_11053654	Not Available	825	Open in IMG/M
3300031910\|Ga0306923_10239495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2075	Open in IMG/M
3300031910\|Ga0306923_10666741	Not Available	1161	Open in IMG/M
3300031910\|Ga0306923_10877410	Not Available	984	Open in IMG/M
3300031910\|Ga0306923_11004739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	906	Open in IMG/M
3300031910\|Ga0306923_11594100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	679	Open in IMG/M
3300031912\|Ga0306921_10690880	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300031941\|Ga0310912_10109760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2044	Open in IMG/M
3300031941\|Ga0310912_10179090	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300031941\|Ga0310912_10636816	Not Available	828	Open in IMG/M
3300031941\|Ga0310912_11219730	Not Available	572	Open in IMG/M
3300031942\|Ga0310916_10214375	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300031945\|Ga0310913_11189983	Not Available	531	Open in IMG/M
3300031946\|Ga0310910_11251657	Not Available	574	Open in IMG/M
3300031947\|Ga0310909_10093205	Not Available	2409	Open in IMG/M
3300031947\|Ga0310909_11220818	Not Available	607	Open in IMG/M
3300031947\|Ga0310909_11521056	Not Available	532	Open in IMG/M
3300031954\|Ga0306926_11130566	Not Available	924	Open in IMG/M
3300031954\|Ga0306926_12042332	Not Available	643	Open in IMG/M
3300031962\|Ga0307479_11794904	Not Available	565	Open in IMG/M
3300032039\|Ga0318559_10312440	Not Available	730	Open in IMG/M
3300032059\|Ga0318533_10214765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1381	Open in IMG/M
3300032059\|Ga0318533_10760391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300032059\|Ga0318533_11367278	Not Available	517	Open in IMG/M
3300032059\|Ga0318533_11386533	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300032076\|Ga0306924_10434245	Not Available	1501	Open in IMG/M
3300032076\|Ga0306924_11202041	Not Available	820	Open in IMG/M
3300032261\|Ga0306920_100526851	Not Available	1752	Open in IMG/M
3300033289\|Ga0310914_10166623	Not Available	1953	Open in IMG/M
3300033289\|Ga0310914_11609426	Not Available	553	Open in IMG/M
3300033290\|Ga0318519_10114478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR216	1469	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.96%
Host-Associated	Host-Associated	5.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.44%
Plants	Host-Associated → Plants	3.36%
Aquatic	Environmental → Aquatic	2.52%
Fungi	Host-Associated → Fungi	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.52%
Mycelium	Host-Associated → Fungi → Mycelium	1.68%
Peat	Environmental → Terrestrial → Peat	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.15%
Loam	Environmental → Terrestrial → Soil → Loam	10.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.36%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.52%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	0.84%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011392	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC071 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013025	Fungus gardens microbial communities from leaf cutter ant in Botucatu, State of S?o Paulo, Brazil - Atta bisphaerica ABBM2	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1010649881	3300000955	Soil	ATALKTRTAWSKDRKRLVATHQIKTRQGKQGQLIITRYLINEGKNLVVVYTLKLDAEPETSARQIWDKQA*
JGI1027J12803_1082532592	3300000955	Soil	GATALKTRTAWSEDHKQLVSTHQIKTKEGKEGQLIITRYLINEGKSMVVAFTLILNAEPIETSARQIWNKQA*
JGI12627J18819_101199522	3300001867	Forest Soil	LGAISLNTRAGWSTDAKQLVATHQIKTKQGKEGKLVVTRYLIDDGDTLMVTFTLRLNAEPDEFSARQIWHKQA*
JGI25614J43888_101340481	3300002906	Grasslands Soil	TAWSKDHQQLIEIHQIKTKQGKEGQLVIERYLIDEGGTLVAAYTLKLNAEPNQTSARQIWHKEV*
Ga0066388_1080049032	3300005332	Tropical Forest Soil	DERSHPSNLQLLGATCLTARTAWSEDHKNLVVTYQIKTTQGKEGQLIVKRYLINEGKTEVAVFTLQLNAEPDQISARQIWPKQA*
Ga0070714_1005784753	3300005435	Agricultural Soil	ALKTRTAWSEDQTQLVETHQIKTRQGKEGQLIIKRYLIDEGKTLVAAYTLKLNAEPNQTSARQIWHKEV*
Ga0070711_1019247792	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SLTARTAWSKDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWRKQA*
Ga0070762_104264902	3300005602	Soil	LGATSLKTRTAWSKDHQQLIEAHEIKTKQAKEGQLIIKRYLIDEGKTLVAAYTLKLNAEPNQPSARQIWRKQA*
Ga0070764_110087501	3300005712	Soil	YLDGGTHQSNLQLLGATTLTARTAWSKDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLTLSTEPGQISARQIWPKQA*
Ga0066903_1031656662	3300005764	Tropical Forest Soil	PSNLQLLGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLVVKRYLTNEGKTEVVVFTLKLNAEPDQISARQIWPRQA*
Ga0066903_1041284861	3300005764	Tropical Forest Soil	TAWSEDRKQLVETHQIKTKQGKEGQLIIKRYLIDDGKSMVVAFTVNLNAEPQITSARQIWHK*
Ga0073928_1000941610	3300006893	Iron-Sulfur Acid Spring	LGATTLKIRTAWSKDHEQLVATHQIKTKQGKEGQLIVKRYLINEGKTLVVAFTLELNAEPHTISARQIWHKQA*
Ga0073928_101058561	3300006893	Iron-Sulfur Acid Spring	AWSKDHQHLIEAHQIKTKQGKEGQLIIERYLIDEGKTLVAAYTLKLNEEPNQTSARQIWHKQA*
Ga0073928_107099193	3300006893	Iron-Sulfur Acid Spring	TRTAWSKDHQQLIEAHQIKTKQGKEGQLIIKRHLIDEGKTLEAAYTLKLDAEPNQTSARQIWHKEA*
Ga0105245_132881111	3300009098	Miscanthus Rhizosphere	NLQLLGANCLTARTAWSSDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLTLSTEPSQISARQIWRKQA*
Ga0105247_108018041	3300009101	Switchgrass Rhizosphere	LQLLGANCLTARTAWSSDQKQLVVTYQIKTKQGQEGQLIVTRYLMNEGKTEIVVFTLELTTEPSQISARQVWHKEA*
Ga0126373_121600821	3300010048	Tropical Forest Soil	TVTSNKQLMGATALTTRAAWSEDGKRLVATSQIKTKQGKQGQLIITRYLTNGGKNLVAVYTLKLDAEPETSARQIWDKQA*
Ga0126372_113450851	3300010360	Tropical Forest Soil	RTAWSEDQKQLVVTHQIKTRQGKEGQLIIKRYLINDGKNMVLAFTVKLNAEPQINSARQIWHK*
Ga0134128_107131302	3300010373	Terrestrial Soil	KTRTAWSEDHKQLVSTHQIKTKEGKEGQLIITRYLINEGKSMVVAFSLMLNADPIETSARQIWNKQA*
Ga0126381_1017543832	3300010376	Tropical Forest Soil	DGRSHPSNLQLLGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLVVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPRQA*
Ga0126383_131282982	3300010398	Tropical Forest Soil	LYLDGRTDPSDQQLLGAIALKTRTAWSEDRKRLVATHQIKTKQGKQGQLIITRYLMNEGKNLVVVYTLKLDAEPETSARQIWDKQA*
Ga0153987_10277032	3300011392	Attine Ant Fungus Gardens	VWSTDAKQLVATHQIKTKQGKEGKLVVTRYLKDDGDTLMVTFTLRLNAEPDEFSARQIWHKQA*
Ga0137363_103958242	3300012202	Vadose Zone Soil	LGATSLKARTAWSEDHKQLVATHQIKTKQGKEGQLIIKRYLIDEGKTLVVAFTLELNAEPNKTSARQIWHKQA*
Ga0164309_103990353	3300012984	Soil	CLTARTAWSKDQKQLVVIYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPKQA*
Ga0157367_11535411	3300013025	Fungus Garden	QLLGATALKTRTAWSEDHKQLVATHQIKTKQGKEGQMIITRYLINEGKSMVVAFSLKLNGEPDKTSARQIWHKQA*
Ga0157379_114702451	3300014968	Switchgrass Rhizosphere	KTRTAWSEDHKQLVSTHQIKTKEGKEGQLIITRYLINEGKSMVVAFTLMLNAEPIETSARQIWNKQA*
Ga0182036_101700101	3300016270	Soil	TDPSNKQLLGATALKTRTAWSEDQKQLIETHHIKTRQGKEGQLIITRYLINDGKNMVLAFTVKLNAEPQVTSARQIWHK
Ga0182041_105947552	3300016294	Soil	SNKQLLGATALKTRTAWSEDQKQLVETHQIKTKQGKEGQLIIKRYLIDDGKSMVVAFTVNLNAELQITSARQIWHK
Ga0182033_105517901	3300016319	Soil	TAWSEDQKQLVETLQIKTRQGKEGQLIIKRYLIDDGKSMLVAFTVKLNAEPQIASAREIWHKQP
Ga0182035_121026461	3300016341	Soil	GATALKTRTAWSEDQKQLVETHQIKTKQGKEGQLIIKRYLIDDGKSMVVAFTVNLNAEPQITSARQIWHK
Ga0182032_105536011	3300016357	Soil	AAWSKDQKQLIATYHIKTKQGKEGELIIKRHLINEGKTLVAAYTVKLHGEPDTTSARQIWHKQA
Ga0182032_107280682	3300016357	Soil	AWSEDQKQLVETHQIKTRQGKQGELIIKRYLINDGKNMVLAFTVKLNAEPQITSARQIWH
Ga0182032_120301971	3300016357	Soil	DETLYLDGRSHPSNQQLLGAKCLTARTTWSGDQKQLLVTYQIKTKQGKEGQLIVTRYLINDGKTEVVVFTLKLNAEPDQISARQIWPKQA
Ga0182034_108422861	3300016371	Soil	SNKQLFGATAQKTRTAWSEDQKQLVETLQIKTRQGKEGQLIIKRYLIDDGKSMLVAFTVKLNAEPQIASAREIWHKQP
Ga0182034_113625202	3300016371	Soil	ATSVKTTTVWSKDYKQLVETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAESAEISARQIWHKQA
Ga0182034_114847521	3300016371	Soil	ATSVKTTTVWSKDYKQLVETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAEPAEISARQIWHKQA
Ga0182034_119331831	3300016371	Soil	TALKTRTAWSEDQKQLVETHQIKTKQGKEGQLIIKRYLIDDGKSMVVAFTVNLNAEPQITSARQIWHK
Ga0182040_111202561	3300016387	Soil	QLLGATTLKTRTAWSEDGKRLVATHQIKTKQGKQGQLIITRYLTNGGKNLVAVYTLKLDGEPETSARQVWVKQA
Ga0182040_111593523	3300016387	Soil	VETRAAWSQDGKRLVATHQIKTKQGKQGQLIITRYLMNGGKNLVAVYTLKLDAEPETSARQIWDKQA
Ga0182037_105713811	3300016404	Soil	YKQLVETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAEPAETSARQIWHKQA
Ga0182039_101631912	3300016422	Soil	MHLPSRSNAPFCKERSLFPDGRSHPSNLQLLGANCLTASTAWSKAQKQLVVIYQIETKQGKEGQLIVKRYLINEGKTEVAVFTLKL
Ga0182039_103170261	3300016422	Soil	TRTAWSDDQKQLVETLQIKTRQGREGQLIIKRYLINDGKSMVVAFTVRLNAEPEITSACQIWHKQA
Ga0182039_108483852	3300016422	Soil	KTRTAWSKDQKRLVVTYQTKTKQGKEGQLIVKRYLMNEGKTEVVVFTLKLNAKPDQISARQIWPKQA
Ga0182039_111535831	3300016422	Soil	KTATVWSKDYKQIVETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAESAEISARQIWHKQA
Ga0182038_109045472	3300016445	Soil	TVATRGPGDFALDENLYLDERSHPSNLQLLGATCLTARTAWSEDHKNLVVTYQIKTTQGKEGRLIVKRYLINEGKTEVAVFTLQLNAEPDQISARQIWPRQV
Ga0182038_116580651	3300016445	Soil	LGATALKTRTAWSEDQKQLVETHQIKTRQGKQGELIIKRYLINDGKNMVLAFTVKLNAEPQITSARQIWHK
Ga0187783_102642861	3300017970	Tropical Peatland	TTTVWSKDYKQLVETHQIKTKEGKEGQLVIKRYLADDGKSLVAIYTLQLNAEPGEISAQQIWHRQA
Ga0187783_107629821	3300017970	Tropical Peatland	TVWSNDYKQLVETHQIKTKEGKEGQLIIKRYLTDGGKSLVAIYSLQLNAEPAEISARQIWHKQA
Ga0187781_108344601	3300017972	Tropical Peatland	TVWSKDYKQLVETHQIKTKEGKEGQLIIERYLADDGKSLVAIYSLQLNAEPGEISARQIWHRQA
Ga0210407_114665871	3300020579	Soil	QLLGANCLTARTAWSRDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLNTEPGQISARQIWPKQAQV
Ga0210403_103180023	3300020580	Soil	SLKTRTAWSKDPQTQQLIEAHQIKTKQGKEGQLIIKRYLIDEGKTLVAAYTLKLNAEPNQPSARQIWHKQA
Ga0210404_108533491	3300021088	Soil	RSHPSNLQLLGANCLTARTAWSSDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLSTEPGQISARQIWPKQA
Ga0210408_108921221	3300021178	Soil	KRLLGATALKTRTAWSEDQTQLVETHQIKTRQGKEGQLIIKRYLINDGKSMVLAFTVKLNAEPQISSAREIWHKQP
Ga0213872_100959281	3300021361	Rhizosphere	NLQLLGATCLTARTSWSTDQKQLVVTYQIKTKQGKEGQLIIKRYLINEGKTEVAVFTLQLNAERDQISARQIWPKQA
Ga0213877_100627301	3300021372	Bulk Soil	SNLQVLGATSVNTTTVWSEDYKQLLETHQIKTKEGKGGQLIIKRYLTDDGKSLVAIYSLQLDAESVETSARQIWRKQA
Ga0210393_105763261	3300021401	Soil	LYPDERSHPSNLQLLGANCLTARTAWSSDQKQLTVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLNTEPGQISARQIWPKQAQV
Ga0210397_103986302	3300021403	Soil	ARTAWSSDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLNTEPGQISARQIWPKQAQV
Ga0210387_115677261	3300021405	Soil	TARTAWSRDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLDAEPGQISARQIWPKQA
Ga0210387_117927141	3300021405	Soil	GTTRTAWSKNHPQLIEAHQIKTKKGKEGQLIIERYLIDEGKTLVAACTLKLNAEPNQTSARQIWHKEA
Ga0213879_100298981	3300021439	Bulk Soil	LLGADCLTATTAWSKDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPKQA
Ga0213878_101006382	3300021444	Bulk Soil	TTVWSTDYQQLLETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAETAEISARQIWHKQA
Ga0210392_103643762	3300021475	Soil	LTARTAWSSDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLNTEPGQISARQIWPKQAQV
Ga0210392_108728491	3300021475	Soil	KHPSNLQLLGATTLTARTAWSKDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLELNAEPDQISARQIWPKQAKV
Ga0126371_108279371	3300021560	Tropical Forest Soil	LGATTLKTRTAWSQDGKRLVATHQIKTKQGKQGQLIITRYLVNGGKNLVAVYTLKLDAEPDKTSARQIWDKQA
Ga0126371_117060961	3300021560	Tropical Forest Soil	QLLGANCLTARTAWSGDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLNAEPDQISARQIWPKQA
Ga0126371_121286282	3300021560	Tropical Forest Soil	QLLGATALKTRTAWSEDQKQLIETHQIKTRQGKEGELIIKRYLINDGKSMVVAFTVKLNAEPQLTSARQIWHK
Ga0126371_131237991	3300021560	Tropical Forest Soil	QLLGATALKTRTAWSEDQKQLIETHQIKTRQGKEGELIIKRYLINDGKNMVLAFTVKLNAEPQITSARQIWHK
Ga0207684_110286191	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PDGRSYPSNLQLLGANCLTARTAWSKDQKQLVVIYQIKTKQGKEGQLIVKRYLINEGKTEVAVFTLKLNAEPDQISAHQIWPKQA
Ga0207700_108246761	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GATSLKTRTAWSKDHQQLTETHQIKTKQGKEGQLIIKRYLIDEGKALVAAYTLKLNAEPNQTSARQIWHKEV
Ga0209523_10118363	3300027548	Forest Soil	PDGRSHPSNLQLLGANCLTARTAWSRDQKQLVVTYQIKTKQGKEGQLIVTRYLINEGKTEVVVFTLKLNTEPGQISARQIWPKQA
Ga0209523_10792942	3300027548	Forest Soil	DTGNLNLLGATSLNARTSWSQDYKQLVETHQIRTKQGKDGSLIIKRYLIDQGKTLVVVFSLKLNAEPSQTSARQIWRKQA
Ga0209693_100392402	3300027855	Soil	LGATSLKTRTAWSKDHQQLIEAHQIKTKQGKEGQLIIKRYLIDEGKTLVAAYTLKLNAEPNQPSARQIWRKQA
Ga0311338_114716821	3300030007	Palsa	LLGATSLKTRTAWSNDHQQLIEAHQIKTKHGKEGQLIIKRYLIDEGKTLVAAYTLKLNAEPSQPSTRQIWRKQA
Ga0318538_101674521	3300031546	Soil	AQKTRTAWSEDQKQLVETHQIKTKQGKEGELIIKRYLINDGKSMVLAFTVKLDAEPQITSAREIWHKQP
Ga0310915_102347511	3300031573	Soil	ALKTRTAWSEDQKQLVETLQIKTRQGREGQLIIKRYLINDGKSMVVAFTVRLNAEPEITSACQIWHKQA
Ga0310915_106097862	3300031573	Soil	MHLPSRSNAPFCKERSLFPDGRSHPSNLQLLGANCLTASTAWSKAQKQLVVIYQIETKQGKEGQLIVKRYLINEGKTEVAVFTLKLNAEPDQISARQIWPRRA
Ga0318542_105349931	3300031668	Soil	CTNPSNKQLLGATALKTRTAWSKDQKRLVVTYQTKTKQGKEGQLIVKRYLMNEGKTEVVVFTLKLNAKPDQISARQIWPKQA
Ga0318561_108387031	3300031679	Soil	LGATAVETRAAWSQDGKRLVATHQIKTKQGKQGQLIITRYLINEGKSLVAVYTLKLDAEPETSARQIWNKQA
Ga0306917_100871906	3300031719	Soil	AWSKDQKQLVETNQIKTKQGKDGQLIIKRYLIDEGKTMVVAFTLKLNAEPNQTSARQIWHKQA
Ga0306917_102714291	3300031719	Soil	GANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLVVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPRQA
Ga0306917_108063361	3300031719	Soil	TAQKTRTAWSEDQKQLVETHQIKTKQGKEGELVIKRYLINDGKSMVLAFTVKLNAEPQITSAREIWHKQP
Ga0306917_110588772	3300031719	Soil	GATCLTARTAWSEDHKNLVVTYQIKTTQGKEGQLIVKRYLINEGKTEVAVFTLQLNAEPDQISARQIWPKQA
Ga0318509_101778622	3300031768	Soil	MHLPSRSNAPFCKERSLFPDGRSHPSNLQLLGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLIVKRYLINEEKTEVAVFTLKLNAEPDQISARQIWPKQA
Ga0318548_102894981	3300031793	Soil	TAWSEDQTQLVETHQIKTRQGKEGQLIIKRYLINDGKSMVLAFTVKLNAEPQITSAREIWHKQP
Ga0310917_107070581	3300031833	Soil	CTNPSNKQLLGATALKTRTAWSKDQKRLVVTYQTKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPKQA
Ga0306919_110123851	3300031879	Soil	RGPGFALDETLYLDGRSHPSNQQLLGANCLTATTAWSGDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVAVFTLKLNAEPDQISARQIWPKQA
Ga0306919_110895451	3300031879	Soil	LGATALNTRTAWSKDRKRLVATQQIKTKQGKHGQLIITRYLINEGKNLVVVYALKLDAEPETSARQIWDKQA
Ga0306925_100598643	3300031890	Soil	LFPDGRSHPSNLQLLGANCLTASTAWSKAQKQLVVIYQIETKQGKEGQLIVKRYLINEGKTEVAVFTLKLNAEPDQISARQIWPRRA
Ga0306925_110536541	3300031890	Soil	NCLVQDYQQLVETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAESAEISARQIWHKQA
Ga0306923_102394953	3300031910	Soil	TTVWSKDYKQLVETHQIKTKEGKEGQLIIKRYLTADGKSLVAIYSLQLNAETAEISARQIWRKS
Ga0306923_106667411	3300031910	Soil	RTDPSNQQLLGATAVKTRAAWSQDGQRLVATHQIKTKQGKQGQLIITRYLMNGGKNLVAVYTLKLDAEPETSARQIWNKQA
Ga0306923_108774102	3300031910	Soil	CLTARTAWSEDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARKIWPKQA
Ga0306923_110047393	3300031910	Soil	RTAWSKDQKQLVETHQMKTKQGKEGQLIIKRYLIDEGKTMVVAFTLKLNGEPDQTSARQIWRKQA
Ga0306923_115941001	3300031910	Soil	ALRTRAAWSKDQKQLIATYHIKTKQGKEGELIIKRHLINEGKSLVAAYTVKLHGEPDTTSARQIWHKQA
Ga0306921_106908801	3300031912	Soil	LGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVAVFTLKLNAEQDQISARQIWPKQA
Ga0310912_101097601	3300031941	Soil	KDCKQLVETHQIKTKEGKEGQLIIKRYLTADGKSLVAIYSLQLNAETAEISARQIWRKS
Ga0310912_101790901	3300031941	Soil	PDGRSHPSNLQLLGANCLSARTDWSKDQKQLVVIYQIKTEQGKEGQLIVKRYLINEEKTEVAVFTLKLNAEPDQISARQIWSKQA
Ga0310912_106368162	3300031941	Soil	GRSHPSNQQLLGAKCLTARTAWSGDQKQLVVTYQIKTKQGKEGQLIVTRYLIDQGKTEVVVFTLKLNAEPDQISARQIWRKQA
Ga0310912_112197301	3300031941	Soil	GATALNTRAAWSEDGKRLVATSQIKTKQGKQGQLIIKRYLMNGGKNLVAVYTLKLDGEPETSARQVWVKQA
Ga0310916_102143753	3300031942	Soil	MHLPSRSNAPFCKERSLFPDGRSHPSNLQLLGANCLTASTAWSKAQKQLVVIYQIKTKQGKEGQLIVKRYLINEEKTEVAVFTLKLNAEPDQISARQIWPKQA
Ga0310913_111899832	3300031945	Soil	LNTRTAWSKDRKRLVATQQIKTKQGKHGQLIITRYLINEGKNLVVVYALKLDAEPETSARQIWDKQA
Ga0310910_112516571	3300031946	Soil	DLSNKQLLGATALKTRTAWSEDQKQLVETHQIKTKQGKEGQLIIKRYLIDDGKSMVVAFTVNLNAEPQITSARQIWHK
Ga0310909_100932051	3300031947	Soil	DCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLVVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPRQA
Ga0310909_112208181	3300031947	Soil	GATSLKTTTAWSQDQKQLVETDQIKTKQGKEGQLIIKRYLIDEGKTMVVAFTLKLNTEPDQTSARQIWRKQV
Ga0310909_115210562	3300031947	Soil	KQLLGATALKTRTAWSEDQTQLVETHQIKTRQGKEGQLIIKRYLINDGKSMVLAFTVKLNAEPQITSAREIWHKQP
Ga0306926_111305662	3300031954	Soil	DPSNKQLLGATALKTRTAWSEDQKQLVETHQIKTKQGKEGQLIIKRYLIDDGKSMVVAFTVNLNAELQITSARQIWHK
Ga0306926_120423321	3300031954	Soil	LLGATCLTARTAWSEDHKNLVVTYQIKTTQGKEGRLIVKRYLINEGKTEVAVFTLQLNAEPDQISARQIWPKQA
Ga0307479_117949042	3300031962	Hardwood Forest Soil	LDVLGATSLKTTTAWSKDHQQLIETHQIKTKQGKEGQLIIERYLIDEGGTLVAAYTLKLNEDPNQTSARQIWHKEV
Ga0318559_103124401	3300032039	Soil	MHLPSRSNAPFCKERSLFPDGRSHPSNLQLLGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLIVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPKQA
Ga0318533_102147652	3300032059	Soil	TVATRGRGFALDETLYPDGRSHPSNLQLLGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLVVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPKQA
Ga0318533_107603912	3300032059	Soil	TTVWSKDCKQLVETHQIKTKEGKEGQLIIKRYLTADGKSLVAIYSLQLNAETAEISARQIWRKS
Ga0318533_113672781	3300032059	Soil	KTRTAWSEDQKQLVETLQIKTRQGKEGQLIIKRYLIDDGKSMLVAFTVKLNAEPQIASAREIWHKQP
Ga0318533_113865332	3300032059	Soil	TKAAWSDDHKQLVETHQIKTKQGKEGQLIITRYLIDGGNTLVVAFALKLNTEPGETSARQIWHKQA
Ga0306924_104342452	3300032076	Soil	ATRGRGFALDETLYPDGRSHPSNLQLLGANCLTARTAWSEDQKQLVVTYQIKTKQGKEGQLVVKRYLINEGKTEVVVFTLKLNAEPDQISARQIWPRQA
Ga0306924_112020411	3300032076	Soil	LGATAIKTRTAWSEDHKRLVATHQIKTKQGKLGQLIITRYLINEGKSLVAVYTLKLDAEPGETSARQIWNKQA
Ga0306920_1005268511	3300032261	Soil	ATAVETRAAWSQDGKRLVATHQIKTKQGKQGQLIITRYLINEGKSLVAVYTLKLDAEPETSARQIWNKQA
Ga0310914_101666234	3300033289	Soil	RTAWSEDQKQLVETHQIKTKQGKEGELVIKRYLINDGKSMVLAFTVKLNAEPQITSAREIWHKQP
Ga0310914_116094261	3300033289	Soil	NLQVLGATSVKTATVWSKDYKQIVETHQIKTKEGKEGQLIIKRYLTDDGKSLVAIYSLQLNAESAEISARQIWHKQA
Ga0318519_101144781	3300033290	Soil	QLLGATTLKTRTAWSKDGKRLVATHQIKTKQGKQGQLIITRYLINGGKNLVAVYTLKLDAEPDKTSARQIWDKQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074489

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences