NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074646

Metagenome / Metatranscriptome Family F074646

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074646
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 102 residues
Representative Sequence MKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICRQIGQAGEWRENED
Number of Associated Samples 94
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.30 %
% of genes near scaffold ends (potentially truncated) 23.53 %
% of genes from short scaffolds (< 2000 bps) 89.92 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (52.941 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(29.412 % of family members)
Environment Ontology (ENVO) Unclassified
(32.773 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.739 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.77%    β-sheet: 23.85%    Coil/Unstructured: 55.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF07519Tannase 12.61
PF05235CHAD 9.24
PF00248Aldo_ket_red 4.20
PF05580Peptidase_S55 3.36
PF00400WD40 2.52
PF00365PFK 2.52
PF13462Thioredoxin_4 1.68
PF13620CarboxypepD_reg 1.68
PF14535AMP-binding_C_2 1.68
PF00468Ribosomal_L34 1.68
PF00717Peptidase_S24 1.68
PF00825Ribonuclease_P 0.84
PF01738DLH 0.84
PF14559TPR_19 0.84
PF01408GFO_IDH_MocA 0.84
PF00593TonB_dep_Rec 0.84
PF07676PD40 0.84
PF13424TPR_12 0.84
PF01916DS 0.84
PF11695DUF3291 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG3025Inorganic triphosphatase YgiF, contains CYTH and CHAD domainsInorganic ion transport and metabolism [P] 9.24
COG5607CHAD domain, binds inorganic polyphosphatesFunction unknown [S] 9.24
COG02056-phosphofructokinaseCarbohydrate transport and metabolism [G] 2.52
COG0230Ribosomal protein L34Translation, ribosomal structure and biogenesis [J] 1.68
COG0594RNase P protein componentTranslation, ribosomal structure and biogenesis [J] 0.84
COG1899Deoxyhypusine synthaseTranslation, ribosomal structure and biogenesis [J] 0.84

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.94 %
UnclassifiedrootN/A47.06 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps__Contig_188446All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300001661|JGI12053J15887_10464297Not Available605Open in IMG/M
3300002914|JGI25617J43924_10068158All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1300Open in IMG/M
3300004103|Ga0058903_1259547Not Available556Open in IMG/M
3300004463|Ga0063356_100010675All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8243Open in IMG/M
3300004479|Ga0062595_101079059Not Available699Open in IMG/M
3300005093|Ga0062594_100482273All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300005294|Ga0065705_10644795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria681Open in IMG/M
3300005332|Ga0066388_102991511All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300005332|Ga0066388_106067504Not Available610Open in IMG/M
3300005434|Ga0070709_10093442All Organisms → cellular organisms → Bacteria1988Open in IMG/M
3300005518|Ga0070699_100110088All Organisms → cellular organisms → Bacteria2418Open in IMG/M
3300005534|Ga0070735_10349097All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300005536|Ga0070697_101242670Not Available664Open in IMG/M
3300005537|Ga0070730_10998456Not Available522Open in IMG/M
3300005542|Ga0070732_10843528Not Available559Open in IMG/M
3300005553|Ga0066695_10543630Not Available707Open in IMG/M
3300005554|Ga0066661_10405452All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium835Open in IMG/M
3300005560|Ga0066670_10609207Not Available664Open in IMG/M
3300005569|Ga0066705_10537115Not Available727Open in IMG/M
3300005574|Ga0066694_10617333Not Available505Open in IMG/M
3300005575|Ga0066702_10538938All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis707Open in IMG/M
3300005618|Ga0068864_101196867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium758Open in IMG/M
3300005764|Ga0066903_100576664All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1940Open in IMG/M
3300005764|Ga0066903_105275188All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300006796|Ga0066665_10097462All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium2149Open in IMG/M
3300006800|Ga0066660_10215500All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300006845|Ga0075421_100550777All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300006853|Ga0075420_101880784All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300006854|Ga0075425_100489617All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300006880|Ga0075429_100213414Not Available1691Open in IMG/M
3300006893|Ga0073928_10279435All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus1263Open in IMG/M
3300009012|Ga0066710_100053567All Organisms → cellular organisms → Bacteria5021Open in IMG/M
3300009012|Ga0066710_100411417All Organisms → cellular organisms → Bacteria2019Open in IMG/M
3300009038|Ga0099829_10164185All Organisms → cellular organisms → Bacteria → Acidobacteria1780Open in IMG/M
3300009038|Ga0099829_11555566Not Available546Open in IMG/M
3300009088|Ga0099830_10773405All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae792Open in IMG/M
3300009090|Ga0099827_11021900All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300009100|Ga0075418_12009052Not Available630Open in IMG/M
3300009137|Ga0066709_100596948All Organisms → cellular organisms → Bacteria1572Open in IMG/M
3300009137|Ga0066709_100848939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1327Open in IMG/M
3300009137|Ga0066709_101611156Not Available928Open in IMG/M
3300009137|Ga0066709_102142185Not Available772Open in IMG/M
3300009137|Ga0066709_102376867Not Available722Open in IMG/M
3300009553|Ga0105249_12054801All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300010046|Ga0126384_10530803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1019Open in IMG/M
3300010159|Ga0099796_10269413Not Available713Open in IMG/M
3300010397|Ga0134124_10503189All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1172Open in IMG/M
3300010399|Ga0134127_12501722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria596Open in IMG/M
3300010400|Ga0134122_11971741All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300010401|Ga0134121_11246123All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300010403|Ga0134123_10561075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1089Open in IMG/M
3300011120|Ga0150983_10589746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300011120|Ga0150983_11945938Not Available539Open in IMG/M
3300011120|Ga0150983_12227694All Organisms → cellular organisms → Bacteria → Acidobacteria1100Open in IMG/M
3300011120|Ga0150983_14145041All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300011120|Ga0150983_16172315Not Available562Open in IMG/M
3300011120|Ga0150983_16473472Not Available577Open in IMG/M
3300011271|Ga0137393_10873372Not Available768Open in IMG/M
3300011271|Ga0137393_11665496Not Available527Open in IMG/M
3300012096|Ga0137389_11811392Not Available506Open in IMG/M
3300012198|Ga0137364_10486099All Organisms → cellular organisms → Bacteria → Acidobacteria928Open in IMG/M
3300012199|Ga0137383_10120173All Organisms → cellular organisms → Bacteria → Acidobacteria1916Open in IMG/M
3300012200|Ga0137382_10268821Not Available1185Open in IMG/M
3300012202|Ga0137363_11255692Not Available628Open in IMG/M
3300012202|Ga0137363_11317131Not Available611Open in IMG/M
3300012205|Ga0137362_10876083All Organisms → cellular organisms → Bacteria → Acidobacteria767Open in IMG/M
3300012206|Ga0137380_11007669Not Available712Open in IMG/M
3300012206|Ga0137380_11588578Not Available538Open in IMG/M
3300012208|Ga0137376_10352955All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300012208|Ga0137376_11176005Not Available656Open in IMG/M
3300012209|Ga0137379_10556228All Organisms → cellular organisms → Bacteria → Acidobacteria1055Open in IMG/M
3300012212|Ga0150985_102431031All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1437Open in IMG/M
3300012212|Ga0150985_112522524All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. WS91065Open in IMG/M
3300012351|Ga0137386_11004263Not Available593Open in IMG/M
3300012356|Ga0137371_10680851All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300012362|Ga0137361_11115149Not Available710Open in IMG/M
3300012362|Ga0137361_11400541Not Available622Open in IMG/M
3300012363|Ga0137390_11314033Not Available669Open in IMG/M
3300012469|Ga0150984_108654339Not Available616Open in IMG/M
3300012469|Ga0150984_116972449All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300012469|Ga0150984_121957949Not Available679Open in IMG/M
3300012683|Ga0137398_10557637All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300012685|Ga0137397_10675601Not Available767Open in IMG/M
3300012917|Ga0137395_10046362All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans2712Open in IMG/M
3300012923|Ga0137359_11254259Not Available629Open in IMG/M
3300012925|Ga0137419_11145299Not Available649Open in IMG/M
3300012929|Ga0137404_11345961Not Available659Open in IMG/M
3300012930|Ga0137407_10652340Not Available990Open in IMG/M
3300012930|Ga0137407_12071939Not Available543Open in IMG/M
3300012955|Ga0164298_10607175Not Available752Open in IMG/M
3300012976|Ga0134076_10614284Not Available509Open in IMG/M
3300015241|Ga0137418_10133791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2199Open in IMG/M
3300018468|Ga0066662_10474548Not Available1129Open in IMG/M
3300018482|Ga0066669_10356127All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300018482|Ga0066669_10433012Not Available1124Open in IMG/M
3300020057|Ga0163151_10336671All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300020579|Ga0210407_10530367All Organisms → cellular organisms → Bacteria → Acidobacteria920Open in IMG/M
3300020579|Ga0210407_10574094Not Available880Open in IMG/M
3300020580|Ga0210403_10159675All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300021168|Ga0210406_10044488All Organisms → cellular organisms → Bacteria → Acidobacteria3920Open in IMG/M
3300021171|Ga0210405_10004705All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus12722Open in IMG/M
3300021178|Ga0210408_10112099All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2147Open in IMG/M
3300021344|Ga0193719_10443660Not Available529Open in IMG/M
3300021432|Ga0210384_10941458Not Available765Open in IMG/M
3300021432|Ga0210384_11572180Not Available563Open in IMG/M
3300022508|Ga0222728_1109517Not Available531Open in IMG/M
3300022531|Ga0242660_1123835Not Available655Open in IMG/M
3300025930|Ga0207701_10884893All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300026551|Ga0209648_10063398All Organisms → cellular organisms → Bacteria3129Open in IMG/M
3300027862|Ga0209701_10380187All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae792Open in IMG/M
3300027903|Ga0209488_10286891All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300029636|Ga0222749_10845602Not Available500Open in IMG/M
3300031231|Ga0170824_118095405Not Available516Open in IMG/M
3300031708|Ga0310686_107991203Not Available1243Open in IMG/M
3300031753|Ga0307477_10369502All Organisms → cellular organisms → Bacteria → Acidobacteria985Open in IMG/M
3300031962|Ga0307479_10705208All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300032174|Ga0307470_11920825Not Available504Open in IMG/M
3300033412|Ga0310810_10078070All Organisms → cellular organisms → Bacteria3991Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil29.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.72%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.20%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.36%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.52%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.68%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.84%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.84%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_035637202199352024SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPVWQLCIYERALDDIYTDWQNIITVFDQDGFTVDVPDIDISGICKQIGRAAEWREDEE
JGI12053J15887_1046429713300001661Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQAGEWR
JGI25617J43924_1006815823300002914Grasslands SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPDIDISGICRQIGQASEWRENEE*
Ga0058903_125954723300004103Forest SoilAGSALMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQASEWRKDED*
Ga0063356_10001067593300004463Arabidopsis Thaliana RhizosphereMKSVFVVHYCSPKESIKNVFIASDEDTAISYCLQWTSIEKFSSEPTWQLLVYERAVDDIHADWQHIVTAFDQDGYTVDVPEIDITPVCRAIKNQQE*
Ga0062595_10107905923300004479SoilMKSVFVVHFCSPVESIKNVFIASDEDTAISYCLQWTSMTKFSKQPTWQLQIHERAMDDIHTDWQHIVTIFDQDGFTVDVPEVNIAPVCRAIQEANEWRDQDE*
Ga0062594_10048227323300005093SoilMKSVFVVHFCSPVESIKNVFIASDEDTAISYCLQWTSMTKFSKQPTWQLQIHERAMDDIHTDWQHIVTIFDQDGFTVDVPEVNIAPVCQAIQEANERRDQDE*
Ga0065705_1064479523300005294Switchgrass RhizosphereMKSVYVVHFCSPAESIKNVFIASDEDTAISYCLQWTSMTKFSDQPAWQLQIHERAMDDIHTDWQHIVTIFDQDGYTVDVPDINIAPVCKAIEQANEWWDQED*
Ga0066388_10299151113300005332Tropical Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHADWQNIITVFDQDGYTVDVPEIDISGVCKRIGEAHEWREEED*
Ga0066388_10606750413300005332Tropical Forest SoilMKSVFVVHYYSPTESLKNVFIASDEDTAISYCLQWTGVDKFSREPAWQLRIYERAMDDIHADWQHIVTIFDQDGYTVDVPDIDISHLCR
Ga0070709_1009344223300005434Corn, Switchgrass And Miscanthus RhizosphereMKSVFVVHFRSPTESLQNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLRIYERALDDLHSDWQNIITIFDQDGFTVDVPDIDISGICRQIGHGKE*
Ga0070699_10011008823300005518Corn, Switchgrass And Miscanthus RhizosphereMAEAVAAPIKSVFVVHFSSPTESLRNVFIASDEDAAISYCLHWTSVTKFSREPEWQLRIYERALDDIYTDWQNIVTIFDQDGFTVDVPDIDITSICRQIGGADK*
Ga0070735_1034909723300005534Surface SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPVWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPDIDISGICKQIGQAGEWHDNEE*
Ga0070697_10124267013300005536Corn, Switchgrass And Miscanthus RhizosphereMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICKQIGQASEWRENEE*
Ga0070730_1099845613300005537Surface SoilVTRWFESEWDPMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICKQIG
Ga0070732_1084352813300005542Surface SoilMRDALARPELRSMKSVFVVHYRSPTESLQNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLRIYERALDDIHTDWQNIITVFDQDGFTVDVPDIDISGICSQFGRADE*
Ga0066695_1054363023300005553SoilDIRAHTRYPDRAALFMSMKSVYLVHFRSPTETLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0066661_1040545213300005554SoilMSMKSVFLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0066670_1060920723300005560SoilMKSVFVVHYRSPKETLNNVFIASDEDTAISYCLQWTSLTKFSKEPEWRLYIYERALDDIHTDWQNIITIFDQDGFTVDFPHIDISGICKQIGQRSEWRKDED*
Ga0066705_1053711513300005569SoilVTRWFGSKLGSMKSVFVVHYRSPKETLNNVFIASDEDTAISYCLQWTSLTKFSKEPEWRLYIYERALDDIHTDWQNIITIFDQDGFTVDFPHIDISGICKQIGQRSEWRKDED*
Ga0066694_1061733313300005574SoilMKSVFVVHFCSPAESIKNVFIASDEDTAISYCLQWTGITKFSNEPAWQFQIHERAVDDIHTDWQHIVTIFDQDGFTVDVPEINIAPLCRAIEQSSEWRD
Ga0066702_1053893813300005575SoilHYRSPKETLNNVFIASDEDTAISYCLQWTSLTKFSKEPEWRLYIYERALDDIHTDWQNIITIFDQDGFTVDFPHIDISGICKQIGQRSEWRKDED*
Ga0068864_10119686713300005618Switchgrass RhizosphereMDIKLHTRYAVRSTPRITNMKSVFVVHFRSPTESIKNVFIASDEDTAISYCLQWTSIVKFSNEATWQFQIYERAVDDIHTDWQHIVTIFDQDGFTVDIPEIDITPACRAIEQAKE
Ga0066903_10057666423300005764Tropical Forest SoilMKSVFVVHFCSPTESIKNVFIASDEDTAISYCLQWTSITKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDMT*
Ga0066903_10527518813300005764Tropical Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHSDWQNIITVFDQDGYTVDVPEIDISHACKQIAQRNEWREEDD*
Ga0066665_1009746213300006796SoilMPMKSVYLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCRDIGRANEWRDEQQ*
Ga0066660_1021550033300006800SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICKQIGQAGEWRQNED*
Ga0075421_10055077723300006845Populus RhizosphereMCKNMDEAVRAPMKSVFVVHYSSPTESLPNVFIASDEDCAISYCLHWTGISKFSKEPEWQLRIYERALDDIHTDWQNIITIFDQDGFTVDVPDIDIGGICSQIGGT*
Ga0075420_10188078413300006853Populus RhizosphereMAEAVSTRIKSVFVVHFWSPAESLQNVFIASDEDAAISYCLHWTGIRKFSKEPEWQLRIYERALDDIHTDWQNIVTIFDQDGFTVDVPDIDISGICGQIGRG
Ga0075425_10048961723300006854Populus RhizosphereMPMKSVYVVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPAWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPDINIDQLCKSIAEANEWRDEEL*
Ga0075429_10021341423300006880Populus RhizosphereMKSVYVVHFCSPTESIKNVFIASDEDTAISYCLQWTSMTKFSNQPAWQLQIHERAMDDLHADWQHIVTIFDQDGFTVDVPEINIGPVCRAIEQASEWRDREE*
Ga0073928_1027943523300006893Iron-Sulfur Acid SpringMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPEIDISGICRQIGQGAEWREEDE*
Ga0066710_10005356743300009012Grasslands SoilMKSVFVVHFCSPAESIKNVFIASDEDTAISYCLQWTGITKFSNEPAWQFQIHERAVDDIHTDWQHIVTIFDQDGFTVDVPEINIAPLCRAIEQSSEWRDDTLT
Ga0066710_10041141723300009012Grasslands SoilMKSVFVVHFRSPRETLNNVFIASDEDKAISYCLQWTGVTKFSNEPAWQLYIYERAVDDIYTDWQHIVTVFDQDGYTVDVPDIDIGPVCRAIRDSSEWRERDPDS
Ga0099829_1016418523300009038Vadose Zone SoilMSMKSVFLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCRSIGEWRDEEL*
Ga0099829_1155556623300009038Vadose Zone SoilMKSVFVVHFCSPTESIKNVFIASDEDTAISYCLQWTNMTKFSKQPTWQLQIHERAVDDIHADWQHIVTIFDQDGYTVDVPEINIAPVCRAIE
Ga0099830_1077340513300009088Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSKQPNWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDVT*
Ga0099827_1102190023300009090Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSKQPNWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIER
Ga0075418_1200905223300009100Populus RhizosphereMAEAVSAVIKSVFVVHFWSPAESLQNVFIASDEDAAISYCLHWTGIRKFSKEPEWQLRIYERALDDIHTDWQNIVTIFDQDGFTVDVPDIDISGICRQIGRGEE*
Ga0066709_10059694823300009137Grasslands SoilMKSVFVVHFCSPAESIKNVFIASDEDTAISYCLQWTGITKFSNEPAWQFQIHERAVDDIHTDWQHIVTIFDQDGFTVDVPEINIAPLCRAIEQSSEWRDDTLT*
Ga0066709_10084893933300009137Grasslands SoilMKSVFVVHFRSPRETLNNVFIASDEDKAISYCLQWTGVTKFSNEPAWQLYIYERAVDDIYTDWQHIVTVFDQDGYTVDVPDIDIGPVCRAIRDSSEWRERDPDS*
Ga0066709_10161115623300009137Grasslands SoilMMKSVYLVHFRSPKESLKNVFIASDEDTAISYCLQWTSVTKFSQEPAWQFQVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEIDISHLCRTIAANAEWRDEGHTPGD*
Ga0066709_10214218523300009137Grasslands SoilMFVDIRAHTRYPDRAGHFMPMKSVFLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDPLCRNIAQANEWRDEEL*
Ga0066709_10237686723300009137Grasslands SoilMKSVFVVHFCSPTESIKNVFIASDEDTAISYCLQWTSMTKFSRLPTWQLQIHERAVDDIHVDWQHIVTIFDQDGFTIDVPEINIAPVFRAIERANEWRDDMT*
Ga0105249_1205480113300009553Switchgrass RhizosphereYAVCWWIGPWGDESMKSVFVVHFCSPVESIKNVFIASDEDTAISYCLQWTSMTKFSKQPTWQLQIHERAMDAIHTDWQHIVTIFDQDGFTVDVPEVNIAPVCQAIQEANERRDQDE*
Ga0126384_1053080323300010046Tropical Forest SoilMKSVFVVHFRSPTESLNNVFIASDEDTAVSYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDIT*
Ga0099796_1026941323300010159Vadose Zone SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQAGEWRENED*
Ga0134124_1050318923300010397Terrestrial SoilMKSVFVVHFRSPTESIKNVFIASDEDTAISYCLQWTSIVKFSNEATWQFQIYERAVDDIHTDWQHIVTIFDQDGFTVDIPEIDITPACRAIEQAKEWRDEEQ*
Ga0134127_1250172223300010399Terrestrial SoilMKSVFVVHFCSPAESIKNVFIASDEDTAISYCLQWTSMTKFSDQPAWQLQIHERAMDDIHTDWQHIVTIFDQDGYTVDVPDINIAPVCKAIEQANEWWDQEN*
Ga0134122_1197174123300010400Terrestrial SoilMKCVFVVHFCSPVESIKNVFIASDEDTAISYCLQWTSMTKFSKQPTWQLQIHERAMDDIHTDWQHIVTIFDQDGFTVDVPEVNIAPVCRAIQEANEWRDQDE*
Ga0134121_1124612313300010401Terrestrial SoilMKSVFVVHFCSPKESIKNVFIGSDEDTAISYCLQWTGISKFSNEPTWQLQIHERAMDDIHSDWQHIVTIFDQDGFTVDVPEINITPVCKAIEQASEWRDQQE*
Ga0134123_1056107533300010403Terrestrial SoilMKSVFVVHFCSPVESIKNVFIASDEDTAISYCLQWTSMTKFSKQPTWQLQIHERAMDDIHTDWQHIVTIFDQDGFTVDVPEVDIAPVCKAIEEAGEWRDQD
Ga0150983_1058974623300011120Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPDIDISGICRQLGQADD*
Ga0150983_1194593813300011120Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQASEWRKDED*
Ga0150983_1222769423300011120Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGYTVDVPEIDISHICKKIGQVDEWRDDGD*
Ga0150983_1414504123300011120Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICKQIGQAGEWRENED*
Ga0150983_1617231513300011120Forest SoilSWFRSELGSMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDIPHIDISGICKQIGDSGEWRKSEE*
Ga0150983_1647347213300011120Forest SoilSELGSMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEKEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPDIDISGICRQLGRGDE*
Ga0137393_1087337223300011271Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSNQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDVT*
Ga0137393_1166549613300011271Vadose Zone SoilPTESLNNVFIASDEDTAISYCLQWTSVTKFSKEPAWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0137389_1181139223300012096Vadose Zone SoilMKSVFVVHFCSPTESIKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGYTVDVPEINIAPVCRAIEQANEWRDDIT*
Ga0137364_1048609923300012198Vadose Zone SoilMSMKSVYLVHFRSPTETLKNVFIASDEDTAISYCLQWTSVNKFSKEPAWQFQIYERAVDDFYTDWQHIVTIFDQDGFTVEVPEINIDKLCRVIGRANEWRDEEQ*
Ga0137383_1012017333300012199Vadose Zone SoilMKSVYLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAQANEWRDEEL*
Ga0137382_1026882123300012200Vadose Zone SoilMSMKSVYLVHFRSPTETLKNVFIASDEDTAISYCLQWTSVNKFSKEPAWQFQIYERAVDDFYTDWQHIVTIFDQDGFTVEVPEINIDQLCRNIARANEWRDEEL*
Ga0137363_1125569223300012202Vadose Zone SoilMAMKSVFLVHFRSPTESLNNVFIASDEDTAISYCLQWTSVTKFSKEPAWRFYVYERAVDDIYTDWQHIVTIFDQDGFTVEVPEIDIDQLCRSIGMAGEGRDEER*
Ga0137363_1131713123300012202Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHTDWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDMT*
Ga0137362_1087608313300012205Vadose Zone SoilMKSVYLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0137380_1100766923300012206Vadose Zone SoilMSMKSVFLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAQANEWRDEEL*
Ga0137380_1158857823300012206Vadose Zone SoilRAMRSVFVVHFRSPKETIQNVFIASDEDTAISYCLQWTSVTKFSNEPEWQFYVYERAVDDIYTDWQHIVTIFDQQGYTVDVPDIDIGPLCRSIRDGESDRR*
Ga0137376_1035295513300012208Vadose Zone SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDI
Ga0137376_1117600523300012208Vadose Zone SoilMMKSVYLVHFRSPKESLKNVFIASDEDTAISYCLQWTSVTKFSKEPAWQFQIYERAVDDLYTDWQHIVTIFDQDGFTVEVPEIDISQLCRTIAGTAEWRDDATGE*
Ga0137379_1055622813300012209Vadose Zone SoilMKSVYLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINI
Ga0150985_10243103123300012212Avena Fatua RhizosphereMSEALLPTAMKSVFVVHFRSPTESLNNVFIASDEDTAISYCLQWTSVSKFSKEPAWQLCIYERALDDIHTDWQTIITIFDQDGFTVDVPDIDIGAICRQIGEGAPGGDLE*
Ga0150985_11252252413300012212Avena Fatua RhizosphereVVHFQSPTESLKNVFIASDEDTAISYCLEWTGVRKFSNEPAWRLLIYERAMDDIHADWQHIVTVFDQDGYTVDVPEIDMDELFRAALRPEE*
Ga0137386_1100426323300012351Vadose Zone SoilRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0137371_1068085113300012356Vadose Zone SoilMKSVFVVHFCSPTESIKNVFIASDEDTAISYCLQWTSLTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDMT*
Ga0137361_1111514913300012362Vadose Zone SoilMPMKSVYLVHFRSPTESLKNVFIALDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEIDIDQLCKSIGRAGEGRD*
Ga0137361_1140054123300012362Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKQPNWQLQIHERAVDDIHADWQHIVTISDQDGFTADVPEINFAPVFRAIERANEWRDDIT*
Ga0137390_1131403313300012363Vadose Zone SoilMVIMKSVFVVHFQSPAESLKNVFIASDEDTAISYCLQWTSITKFSNQPAWQLFIYERAVDDIHTDWQHIVTIFDQDGFTVDVPEIDIAPVFRAIDKANEWRQDEQ*
Ga0150984_10865433923300012469Avena Fatua RhizosphereMSEALLPTAMKSVFVVHFRSPTESLNNVFIASDEDTAISYCLQWTSVSKFSKEPAWQLCIYERAVDDIHTDWQTIITIFDQDGFTVDVPDIDIGAICRQIGEGAPGGDLE*
Ga0150984_11697244923300012469Avena Fatua RhizosphereMKSVFVVHYCSPEESLKNVFIASDEDTAISYCLQWTSIEKFSSAPSWQLRVYERAMDDIHADWQHIVTAFDQDGFTVDVPDIDIAPLCRAIERRNE*
Ga0150984_12195794923300012469Avena Fatua RhizosphereFGITMMKSVYLVHFRSPKESLKNVFIASDEDTAISYCLQWTSVTKFSKEPAWQFQIYERAVDDLYTDWQHIVTIFDQDGFTVEVPDIDISQVCQSIARSHEWGDTAAE*
Ga0137398_1055763723300012683Vadose Zone SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICRQIGQAGEWRENED*
Ga0137397_1067560123300012685Vadose Zone SoilMKSVFVVHFCSPTESIKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINISPVCRAIERANEWRDDIT*
Ga0137395_1004636223300012917Vadose Zone SoilMPMKSVFLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0137359_1125425913300012923Vadose Zone SoilMAMKSVFLVHFRSPTESLNNVFIASDEDTAISYCLQWTSVTKFSKEPAWRFYVYERAVDDIYTDWQHIVTIFDQDGFTVEVPEIDIDQLCRSIGRAGEGRDEEQ*
Ga0137419_1114529923300012925Vadose Zone SoilTENMKSVFVVHFWSPTESIKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDMT*
Ga0137404_1134596123300012929Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDIT*
Ga0137407_1065234013300012930Vadose Zone SoilMKSVYLVHFRSPKESLKNVFIASDEDTAISYCLQWTSVTKFSKEPAWQFQVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCRNIARANEWRDEEL*
Ga0137407_1207193913300012930Vadose Zone SoilMKSVFVVHYCSPTESIKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDIT*
Ga0164298_1060717523300012955SoilMKSVFVVHFRSPTESIKNVFIASDEDTAISYCLQWTSIVKFSNEATWQFQIYERAVDDIHTDWQHIVTIFDQDGFTVDVPEIDITPACRAIEQANEWRDEEQ*
Ga0134076_1061428413300012976Grasslands SoilMRSVFVVHFRSPKETIQNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL*
Ga0137418_1013379123300015241Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSRQPTWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDMT*
Ga0066662_1047454823300018468Grasslands SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDFPHIDISGICKQIGQRSEWRKDED
Ga0066669_1035612723300018482Grasslands SoilMKSVFVVHYRSPKETLNNVFIASDEDTAISVCLQLPSLTKFSKEPEWRLYIYERALVDMHTDWQNIITIFDQDGFTVDFPHIDISGICKQIGQRSEWRKDED
Ga0066669_1043301223300018482Grasslands SoilMPMKSVYLVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPVWQFYVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDQLCKSIAEANEWRDEEL
Ga0163151_1033667123300020057Freshwater Microbial MatMKSVFVVHFCSPAESIKNVFIASDEDTAISYCLQWTSMTKFSRQPAWQLQIHERAMDDIHTDWQHIVTIFDQDGFTVDVPAIDIAPVCKAIEQANEWRDDSP
Ga0210407_1053036723300020579SoilWLAAELGAMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGYTVDVPEIDISHICKKIGQVDEWRDDGD
Ga0210407_1057409423300020579SoilMKSVFVVHFRSPTESLQNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLRIYERALDDLHSDWQNIITVFDQDGFTVDVPDIDISDICRQIGRGEE
Ga0210403_1015967523300020580SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDIPHIDISGICKQIGDSGEWRKSEE
Ga0210406_1004448813300021168SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHADWQNIITIFDQDGFTVDVPHIDISGICKQIGDSGVWRKSEE
Ga0210405_1000470573300021171SoilMKSVFVVHFRSPTESLQNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLRIYERALDDLHSDWQNIITVFDQDGFTVDVPDIDISGICRQIGRGEE
Ga0210408_1011209943300021178SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGYTVDVPEIDISHICKKIGQVDEWRDDGD
Ga0193719_1044366013300021344SoilMKSVYVVHFRSPTESLKNVFIASDEDTAISYCLQWTSVTKFSKEPAWQFQVYERAVDDLYTDWQHIVTIFDQDGFTVEVPEINIDHLCKRIAQANEWRDEEL
Ga0210384_1094145813300021432SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQAGEWREDED
Ga0210384_1157218013300021432SoilMCDTLGSMKSVFVVHYRSPTESLKNVFIASDQDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGFTVEVPDIDISGICKQIGRAHE
Ga0222728_110951713300022508SoilSELGSMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDIPHIDISGICKQIGDSGEWRKSEE
Ga0242660_112383513300022531SoilMKSVCVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICKQIGDSGGWRKSEE
Ga0207701_1088489313300025930Corn, Switchgrass And Miscanthus RhizosphereMKSVFVVHFCSPVESIKNVFIASDEDTAISYCLQWTSMTKFSKQPTWQLQIHERAMDDIHTDWQHIVTIFDQDGFTVDVPEVNIAPVCQAIQEANERRDQDE
Ga0209648_1006339853300026551Grasslands SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPDIDISGICRQIGQASEWRENEE
Ga0209701_1038018723300027862Vadose Zone SoilMKSVFVVHFCSPTESLKNVFIASDEDTAISYCLQWTSMTKFSKQPNWQLQIHERAVDDIHADWQHIVTIFDQDGFTVDVPEINIAPVFRAIERANEWRDDVT
Ga0209488_1028689133300027903Vadose Zone SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQAGEWRENED
Ga0222749_1084560223300029636SoilGAMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGYTVDVPEIDISHICKKIGQVDEWRDDGD
Ga0170824_11809540513300031231Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITVFDQDGFTVDVPHIDISGICKQIGQAGEWREKED
Ga0310686_10799120313300031708SoilMKSVFVVHFRSPTESLRNVFIASDEDTAISYCLQWTSIEKFSKEPIWQLCVYERSMDDISTDWQTIVTMFDQDGYTMDVPDIDIAGLCKSFERMRERLDEG
Ga0307477_1036950223300031753Hardwood Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHTDWQNIITIFDQDGFTVDVPHIDISGICKQIGDSGEWRKSEE
Ga0307479_1070520823300031962Hardwood Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPAWQLCIYERALDDIHTDWQNIITVFDQDGYTVDVPEIDISHICKRIGQVDEWRDDGD
Ga0307470_1192082513300032174Hardwood Forest SoilMKSVFVVHYRSPTESLKNVFIASDEDTAISYCLQWTSLTKFSKEPEWQLCIYERALDDIHADWQNIITIFDQDGFTVDVPHIDISGICKQIGDSGGWRKSEE
Ga0310810_1007807033300033412SoilMKSVFVVHYCSPKESIKNVFIASDEDTAISYCLQWTSIEKFSSEPTWQLLVYERAVDDIHADWQHIVTAFDQDGYTVDVPEIDITPVCRAIKNQQE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.