Metagenome Family F074664

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074664
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	43 residues
Representative Sequence	MRLHVRELALVALLAGAPGLAVAADDWQAQVGAALGKTGAA
Number of Associated Samples	94
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.336 % of family members)
Environment Ontology (ENVO)	Unclassified (55.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.580 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.17% β-sheet: 0.00% Coil/Unstructured: 47.83%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00072	Response_reg	7.56
PF00486	Trans_reg_C	5.04
PF08521	2CSK_N	2.52
PF09828	Chrome_Resist	0.84
PF00873	ACR_tran	0.84
PF08281	Sigma70_r4_2	0.84
PF06439	3keto-disac_hyd	0.84
PF02798	GST_N	0.84
PF02777	Sod_Fe_C	0.84
PF00892	EamA	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.52
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.80 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.92 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.36 %
Unclassified	root	N/A	3.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.52 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.52 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.52 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003368\|JGI26340J50214_10111062	Not Available	699	Open in IMG/M
3300005178\|Ga0066688_10625077	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005332\|Ga0066388_106560351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	586	Open in IMG/M
3300005332\|Ga0066388_108738546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	503	Open in IMG/M
3300005435\|Ga0070714_100558863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300005518\|Ga0070699_100342972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300005610\|Ga0070763_10232345	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300006028\|Ga0070717_11729629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300006794\|Ga0066658_10726139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300006954\|Ga0079219_12458572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300007788\|Ga0099795_10492016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300010048\|Ga0126373_10397421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300010048\|Ga0126373_13249752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300010360\|Ga0126372_12892360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300010361\|Ga0126378_10921006	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300010366\|Ga0126379_13530891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300010376\|Ga0126381_102441598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300010376\|Ga0126381_104573374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300010399\|Ga0134127_13688118	Not Available	503	Open in IMG/M
3300011120\|Ga0150983_12332125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300012361\|Ga0137360_10861890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300012582\|Ga0137358_10232620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1255	Open in IMG/M
3300012922\|Ga0137394_10269742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300012929\|Ga0137404_11900590	Not Available	554	Open in IMG/M
3300012960\|Ga0164301_10382957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300012971\|Ga0126369_11622529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300016319\|Ga0182033_10956668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300016319\|Ga0182033_11255214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300016319\|Ga0182033_11740381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300016341\|Ga0182035_11336627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300016357\|Ga0182032_10143896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1754	Open in IMG/M
3300016357\|Ga0182032_10635936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300016371\|Ga0182034_11413722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300016387\|Ga0182040_11619646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300016404\|Ga0182037_11355810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300016404\|Ga0182037_11789678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300016422\|Ga0182039_12065995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300016445\|Ga0182038_11903403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300021401\|Ga0210393_10567248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300021407\|Ga0210383_10439405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300021420\|Ga0210394_10070631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3026	Open in IMG/M
3300021432\|Ga0210384_11029514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300021474\|Ga0210390_10482571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300021478\|Ga0210402_10013899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6903	Open in IMG/M
3300021479\|Ga0210410_10456391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1143	Open in IMG/M
3300021560\|Ga0126371_12486623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300021560\|Ga0126371_13007513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300025898\|Ga0207692_10217826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1130	Open in IMG/M
3300025906\|Ga0207699_11140874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300025915\|Ga0207693_10455934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300025916\|Ga0207663_10488344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300027173\|Ga0208097_1016165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300027174\|Ga0207948_1022055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300027174\|Ga0207948_1047184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300027548\|Ga0209523_1127144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300028047\|Ga0209526_10249719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1214	Open in IMG/M
3300028906\|Ga0308309_11470361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300031122\|Ga0170822_14065837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300031128\|Ga0170823_17532445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300031474\|Ga0170818_114490460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300031543\|Ga0318516_10552209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300031545\|Ga0318541_10209476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300031564\|Ga0318573_10361003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300031564\|Ga0318573_10496880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300031572\|Ga0318515_10090142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1599	Open in IMG/M
3300031573\|Ga0310915_10139220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1671	Open in IMG/M
3300031573\|Ga0310915_10922035	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300031719\|Ga0306917_11322038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300031724\|Ga0318500_10474985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300031744\|Ga0306918_10454157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1001	Open in IMG/M
3300031744\|Ga0306918_10780444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300031753\|Ga0307477_10527670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300031764\|Ga0318535_10387557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300031768\|Ga0318509_10630376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300031770\|Ga0318521_10612850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300031770\|Ga0318521_10735577	Not Available	600	Open in IMG/M
3300031782\|Ga0318552_10150540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300031796\|Ga0318576_10469354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300031796\|Ga0318576_10490497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300031798\|Ga0318523_10622982	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300031821\|Ga0318567_10838121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031833\|Ga0310917_10328588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1036	Open in IMG/M
3300031845\|Ga0318511_10009913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3191	Open in IMG/M
3300031845\|Ga0318511_10153708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300031846\|Ga0318512_10306428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300031860\|Ga0318495_10203840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300031879\|Ga0306919_10202488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1476	Open in IMG/M
3300031879\|Ga0306919_11027744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031894\|Ga0318522_10103549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1055	Open in IMG/M
3300031910\|Ga0306923_10535397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300031912\|Ga0306921_10326143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1797	Open in IMG/M
3300031912\|Ga0306921_12589252	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031941\|Ga0310912_10079656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2376	Open in IMG/M
3300031941\|Ga0310912_10346476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300031941\|Ga0310912_10648251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300031946\|Ga0310910_10909425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300031946\|Ga0310910_11247212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300031947\|Ga0310909_11660356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300031954\|Ga0306926_11222705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300031954\|Ga0306926_11742364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300031954\|Ga0306926_12360936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300031962\|Ga0307479_10112100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2654	Open in IMG/M
3300032001\|Ga0306922_10148917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2501	Open in IMG/M
3300032001\|Ga0306922_11847878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300032010\|Ga0318569_10120742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1194	Open in IMG/M
3300032039\|Ga0318559_10409327	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300032041\|Ga0318549_10545850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300032042\|Ga0318545_10351472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300032051\|Ga0318532_10096908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1038	Open in IMG/M
3300032059\|Ga0318533_11039412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300032065\|Ga0318513_10541701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300032091\|Ga0318577_10255655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300032091\|Ga0318577_10591109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300032160\|Ga0311301_10741065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1368	Open in IMG/M
3300032180\|Ga0307471_101111118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	956	Open in IMG/M
3300032205\|Ga0307472_100937104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300033289\|Ga0310914_11106376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300033290\|Ga0318519_10029086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2583	Open in IMG/M
3300033290\|Ga0318519_10312332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.16%
Aquatic	Environmental → Aquatic	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.16%
Freshwater	Environmental → Aquatic → Freshwater	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.87%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26340J50214_101110623	3300003368	Bog Forest Soil	MGFHLRELALAALLTGASGLALAADDDWQARVGEALGKTGAAAPGG
Ga0066688_106250771	3300005178	Soil	MRFHLRQLALVALLAGAPGVAFAADDGWQAQVGAALGKTGSA
Ga0066388_1065603512	3300005332	Tropical Forest Soil	MRLHVRELGLVAVLTAAPGLAVAADDWQAQVGEALGKSGATAP
Ga0066388_1087385462	3300005332	Tropical Forest Soil	MTMRLHGRAFALSALLAGAPGLAVAADDWQAQVGKALGKTGAAAPGGIY*
Ga0070714_1005588631	3300005435	Agricultural Soil	MRFHLRQLALVALLAGAPGVAFAADDGWQAQVGAALEKTGSAAPGGIYRVG
Ga0070699_1003429721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MWLHVRELAIVALVAGSPSLAVAADNWQAQVGEALGKTGATATGGIYR
Ga0070763_102323451	3300005610	Soil	MKHHLRQLTLAAALVAAAPGAVFADDWQTQVGEALGKTGSAAPG
Ga0070717_117296291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRFHLRQLALVALLAGAPGVAFAADDGWQAQVGAALEKTGSAAPGGIYRV
Ga0066658_107261391	3300006794	Soil	MRFHLKQLALLVLAGAPGVAFAADNGWQAQVAAALGKTGSAAPGDIYRVG
Ga0079219_124585721	3300006954	Agricultural Soil	MCLHLRQLALVALVAGAPGLAVAADDGWQAQVGETLGKTG
Ga0099795_104920161	3300007788	Vadose Zone Soil	MKYHLRQLTLAALLAAAPSAAFAADDGWEAEVGQALGKTGSA
Ga0126373_103974213	3300010048	Tropical Forest Soil	MRLQVKELALVALLVGAPGLAVAADDWQAQVGEALGKTGATTPS
Ga0126373_132497522	3300010048	Tropical Forest Soil	MTMRLHLRQLALVAFVAGAPGLAVAADDWQAQVGEALGKT
Ga0126372_128923602	3300010360	Tropical Forest Soil	MRLHVKELVLVALLAGAPGLAVAADDWQAQVGEALGKTGAT
Ga0126378_109210061	3300010361	Tropical Forest Soil	MRFNLRRLALSALLTGAPGLAIAADDWQTQVGEALGKPGTTAPGGI
Ga0126379_135308911	3300010366	Tropical Forest Soil	MTMRLHVREFALAALLAGAPGVAVAADDWQGQVSEALGKTGAAAPGGIYRV
Ga0126381_1024415981	3300010376	Tropical Forest Soil	MRLHLREMALAALLAGAPGVAVAADDWQAQVGQALGKTGASTP
Ga0126381_1045733742	3300010376	Tropical Forest Soil	MKSYAQKLAVALVLVGMPGLAFAADDGWQAEVGKALGKTGAA
Ga0134127_136881182	3300010399	Terrestrial Soil	MMRINLRKMALAVLLAGAPGLAFAADNGWQAQVGEALGK
Ga0150983_123321251	3300011120	Forest Soil	MWLYVREFVLVALLAGAPGLAVAADDWHAQVGEAL
Ga0137360_108618902	3300012361	Vadose Zone Soil	MMMRFHLRKLALAALLIGGSGVAFADDWQTQVGEALGKTGSAA
Ga0137358_102326203	3300012582	Vadose Zone Soil	MIMWFHLRQLAVAALFATAPCVAFADEWQAQVGEALGKTG
Ga0137394_102697424	3300012922	Vadose Zone Soil	MKYHLRQLTLAALVAAAPGAAVAADDGWQAQVGQALGKTGSAAPGGVYRV
Ga0137404_119005902	3300012929	Vadose Zone Soil	MTMKVYVRKLALAALLAGAPSLAFAADDGWETRVGEALGKTG
Ga0164301_103829571	3300012960	Soil	MKFHLRHLTLAALLAAAPGAAFAADDGWQAQVGEALGKTGSVAPGGVYRVG
Ga0126369_116225291	3300012971	Tropical Forest Soil	MKVHLRQLTLAALLAGVPSAAFAADDGWQAQVGEAL
Ga0182033_109566681	3300016319	Soil	MRLHVRELALAALLAGTPGLGIAADDWQAQVGEALGKAGAT
Ga0182033_112552142	3300016319	Soil	MRFYVRELALVAVLTAAPGIAVAADDWQAQVGEALGKS
Ga0182033_117403812	3300016319	Soil	MRSHLQWLAVVALLAGAPGPAVAADDWQTQVGEALGKTGAAAAGGIYRVG
Ga0182035_113366272	3300016341	Soil	MKFHLRELVLAASFAGMPGLAVAADDGWQAQVGKALGKTGANMPGGIY
Ga0182032_101438963	3300016357	Soil	MRLHVRELALVALLAGAPGLAVAADDWQAQVGAALGKTGAAAPGG
Ga0182032_106359361	3300016357	Soil	MRFYVRELALVAVLTAAPGIAVAADDWQAQVGEALGKSGATAPGGI
Ga0182034_114137221	3300016371	Soil	MWLHLRQLALAALLAGAPGISAAADDWQAEVGEALGKTGATAPGG
Ga0182040_116196462	3300016387	Soil	MRSHLQWLAVVALLAEAPGPAVAADDWQTQVGEALGKTGAAAAGGIY
Ga0182037_113558101	3300016404	Soil	MRLHVRELALVAVLTAAPGLAVAGDDWHAQVGEALGKS
Ga0182037_117896781	3300016404	Soil	MRFYVRELALVAVLTAAPGIAVAADDWQAQVGEALGKSGATAP
Ga0182039_120659952	3300016422	Soil	MTMWSHLRQLALVAFAAGAPGLAVAADDWQAQVGEALGKTGATTPGG
Ga0182038_119034032	3300016445	Soil	MRLHVRKLALVALLAGAPVLAVAADDWQTQVGQALGKTGA
Ga0210393_105672481	3300021401	Soil	MWLYVREFVLVALLAGAPGLAVAADDWHAQVGEALGKTG
Ga0210383_104394051	3300021407	Soil	MKHHLRQLTLAAALVAAAPGAVFADDWQTQVGEALGKTA
Ga0210394_100706311	3300021420	Soil	MKYHLRQLTLAALVAAAPGAAVAADDGWQAQVGQALGKTGSAAP
Ga0210384_110295142	3300021432	Soil	MWFNLRELAVAALFAAAPGAAFAADEWQAQVGEALGKTGTTTPSGIYR
Ga0210390_104825711	3300021474	Soil	MKHHLRQLTLAAALVAAAPGAVFADDWQTQVGEALGKTGSAAPGGIYR
Ga0210402_100138998	3300021478	Soil	MWLHVRQLAIVALVAGSPSLAVAADDWQAQVGEALGKTGATAAG
Ga0210410_104563911	3300021479	Soil	MPLRVRRLALVALLAAAPGIAAAADDWQAQVGEALG
Ga0126371_124866232	3300021560	Tropical Forest Soil	MKFQLLKLALLALLAGAPSLAFAADDWQAQVGQALGKTGSAAPG
Ga0126371_130075132	3300021560	Tropical Forest Soil	MRLHVRELALVAVLTAAPGTAVAADDWQAQVGEALGKS
Ga0207692_102178263	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MWLYVREFVLVALLAGAPGLAVAADDWHAQVGEALGKTGAAAPGGIYRVGL
Ga0207699_111408741	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKYHLRQLTLAALLAAAPGAAFAADDGWQAQVGQAL
Ga0207693_104559341	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNFNLRQLLLAAVLAGGSSAAVAADDGWQAQVGEALGKTGSAMPGGVYWVG
Ga0207663_104883441	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MWFHLRQLAVAALFAAAPGVAFAADEWQAQVGEALGKTGTTTPSGIYRVG
Ga0208097_10161651	3300027173	Forest Soil	MKHHLRQLTLAAALVAAAPGAVFADDWQTQVGEALGKTG
Ga0207948_10220552	3300027174	Forest Soil	MKHHLRQLTLAAALVAAAPGAVFADDWQTQVGEALGKTGSAA
Ga0207948_10471841	3300027174	Forest Soil	MWLHVRRLAIVAIVAGSPSLAVAADDWQAQVGEALGKTGATAAGGIYRV
Ga0209523_11271442	3300027548	Forest Soil	MWLHVRQLAIVALVAASPSLAVAADDWQAQVGAALGKT
Ga0209526_102497191	3300028047	Forest Soil	MTLRLRELALVAVLAAAPGLAVAADDWQAQVGEALG
Ga0308309_114703612	3300028906	Soil	MWFQLRQLGLAALFAGSPGLAFAADDWQAQVAEAL
Ga0170822_140658371	3300031122	Forest Soil	MRLHVRELAFTALLAAGPSLAVAADDWQAQVGAALGKTGATAPGGIYRVGLP
Ga0170823_175324452	3300031128	Forest Soil	MRFDLRQLAFAALLAGAPGLVFAADDWQAQVGEALGKTGA
Ga0170818_1144904601	3300031474	Forest Soil	MRLLVRVLALVAFIAVAPGLAVAADDWQAQVGEALGKTGS
Ga0318516_105522092	3300031543	Soil	MWLHLRQLALLAIVAGAPGVAIAADDWQAQVGDALGK
Ga0318541_102094763	3300031545	Soil	MWLHARGLALVAVLAGAPGVAVAADDWQTQVGEALGKTGAAAGGVYRVGL
Ga0318573_103610031	3300031564	Soil	MRLYVRELALVAVLAAAPGLAVAADDWQAQVGAALGKTGTTAPGG
Ga0318573_104968801	3300031564	Soil	MWSHLKQLTLAVLLAGAPGVAVAADDWQTQVGEALGKTGAAAPG
Ga0318515_100901421	3300031572	Soil	MRFDLRQLALVALVAGAPGLAVAADEWQGQVGEALGKTGATTPAGIYRVGLP
Ga0310915_101392201	3300031573	Soil	MWLHLRQLALLAIVAGAPGVAIAADDWQAQVGEALGKTGATTPGGIYRV
Ga0310915_109220351	3300031573	Soil	MGLHVRELALIALLAAAPGLAAAADDWQAQVGEALGKTGATTPSGIYRVG
Ga0306917_113220382	3300031719	Soil	MWLHVRQLALAALVVGAPGLAVAADDWQAQVGEALGKTGATT
Ga0318500_104749852	3300031724	Soil	MWLPARGLALVAVLAGAPGVAVAADDWQTQVGEALGKTGAAAAGGIYRVG
Ga0306918_104541571	3300031744	Soil	MWLHVRQLALVALLAGAPSLAVAADDWQAQVGEALGKTGATAAGGIYRV
Ga0306918_107804441	3300031744	Soil	MRLHVRELALVAVLTAAPGIAVAADDWQAQVGEALGKSGATA
Ga0307477_105276701	3300031753	Hardwood Forest Soil	MWFNLRELAVAALFAAAPGAAFAADEWQAQVGEALGKT
Ga0318535_103875571	3300031764	Soil	MRLHVREFAVAALLAGAPGLAVAADDWQAQVGEALGKTGG
Ga0318509_106303762	3300031768	Soil	MWLHARGLALVAVLAGAPGVAVAADDWQTQVGEALGKTGAAAAGG
Ga0318521_106128502	3300031770	Soil	MSLHVRELALVALLAGAPGVAVAADDWQTQVGEALGKTGATVPGGIY
Ga0318521_107355771	3300031770	Soil	MWLHVREVALIALLTGSPGLAVAADDWQAQVGAALGKT
Ga0318552_101505401	3300031782	Soil	MRLNVRELALAALQAGAPGLAVAADDWQAQVGQALGKTGAAA
Ga0318576_104693542	3300031796	Soil	MWLHLRQVALVALLAGAPGLAVAADDWQTQVGEALGKPGATAPGGIY
Ga0318576_104904972	3300031796	Soil	MTLHVRKLALVALLAGAPGTAVAADDWQAQVGATLGKS
Ga0318523_106229822	3300031798	Soil	MWLHVRESALVALLAAAPGLAVAADDWQAQVGEGLGKTGAPAPGGIYR
Ga0318567_108381211	3300031821	Soil	MRLHVPELALVALLAGAPGLAVAADDWQAQVGTALGKTGAAAPGGIY
Ga0310917_103285883	3300031833	Soil	MRLHVRELALVALLAGAPGLAVAADDWQAQVGEALGKTGAMAPGG
Ga0318511_100099131	3300031845	Soil	MRLNVRELALAALLAGAPGLAVAADDWQAQVGQALGKTGAAAPGGIYR
Ga0318511_101537081	3300031845	Soil	MRLHVPELALVALLAGAPGLAVAADDWQAQVGTALGK
Ga0318512_103064282	3300031846	Soil	MRLHVRQLALVVVLAAAPGLAVAADDWQAQVGAALGKTGATA
Ga0318495_102038401	3300031860	Soil	MRFYVRELALVAVLTAAPGIAVAADDWQAQVGEALG
Ga0306919_102024881	3300031879	Soil	MRLHVRELALVAVLTATPGIAVAADDWQAQVGEALGKS
Ga0306919_110277441	3300031879	Soil	MTRWLHVRQFALVDCVAGAPGLAVAADDWQAQVGEA
Ga0318522_101035493	3300031894	Soil	MRLNVRELALAALLAGAPGLAVAADDWQAQVGQALGKTGAAAP
Ga0306923_105353971	3300031910	Soil	MWLHARGLALVAVLAGAPGVAVAADDWQTQVGEALGKTGAAAGGV
Ga0306921_103261431	3300031912	Soil	MRLHLRQLVLVALIGGAPGLAVAADDWQAQVGEALGKAGATA
Ga0306921_125892521	3300031912	Soil	MRLHLRALALAALLTEASGLAVAADDWQAQVGEALG
Ga0310912_100796561	3300031941	Soil	MRFYVRELALVAVLTAAPGIAVAADDWQAQVGEALGKSGATAPGG
Ga0310912_103464763	3300031941	Soil	MWLHARGFALVAVLAGAPGVAVAADDWQTQVGEALGKTGAAAAGGIYRVG
Ga0310912_106482511	3300031941	Soil	MRLHVRKLALVALLAGAPGLAVAADDWQTQVGQALGKTGATAPGGIYRVG
Ga0310910_109094251	3300031946	Soil	MWLHLRQLALAALLAGAPGISAAGDDWQTQVGEALGKSGT
Ga0310910_112472122	3300031946	Soil	MRLHVREVALVALLAGAPGVAVAADDWQEQVGAALGKT
Ga0310909_116603562	3300031947	Soil	MRLHVRGLALAALLAGAPGLAVAADDWQTQVGQALGKT
Ga0306926_112227051	3300031954	Soil	MRLHVRGLALAALLAGAPGLAVAADDWQTQVGQALGKTGATAP
Ga0306926_117423642	3300031954	Soil	MRLHVRELALIALLAGAPGLAVAADDWQAQVGEALG
Ga0306926_123609361	3300031954	Soil	MRLHVRKLALVALLAGAPGLAVAADDWQAQVGAALGKTGATAP
Ga0307479_101121004	3300031962	Hardwood Forest Soil	MWLYVREFVLVALLAGAPGLAVAADDWHAQVGEALGKTGAA
Ga0306922_101489171	3300032001	Soil	MWLHLRQLALLAIVAGAPGVAIAADDWQAQVGEALGKTGATTP
Ga0306922_118478782	3300032001	Soil	MRLHLREVALVALLAGAPGVAVAADDWQEQVGAALGKTGVAAPGGIYRIGL
Ga0318569_101207421	3300032010	Soil	MWLHVRHLALVALVAGAPSLAVAADDWQAQVGEALGKTGATTPSGIYRVGL
Ga0318559_104093272	3300032039	Soil	MWLHVRQLALVALLAGAPSLAVAADDWQAQVGEALGKTGATAAGGIYRVG
Ga0318549_105458502	3300032041	Soil	MRLHVRELALVALLAGAPGLAVAADDWQAQVGAALG
Ga0318545_103514722	3300032042	Soil	MRLHVPELALVALLAGAPGLAVAADDWQAQVGTALG
Ga0318532_100969081	3300032051	Soil	MRFYVRELALVAVLTAAPGIAVAADDWQAQVGEALGK
Ga0318533_110394122	3300032059	Soil	MSLHVRELALVALLAGAPGVAVAADDWQTQVGEALGKTGATVPGGIYRVGL
Ga0318513_105417012	3300032065	Soil	MRLHVRELALVALLAGAPGLAVAADDWQAQVGAALGKTGAA
Ga0318577_102556553	3300032091	Soil	MWLHLRQVALVALLAGAPGLAVAADDWQTQVGEALGKTGATAPGGIYRV
Ga0318577_105911092	3300032091	Soil	MWLHLRQLALVVLVAGAPGLAGAADDWQAQVGEALGKTG
Ga0311301_107410651	3300032160	Peatlands Soil	MEFSMRILALAALLAGAPALALAADDDWQAQVGQALGKT
Ga0307471_1011111183	3300032180	Hardwood Forest Soil	MKYHLRQLTLAAFVAAAPGAAFAADDGWQVRVGEALGKTGSAT
Ga0307472_1009371041	3300032205	Hardwood Forest Soil	MGLQMRQLALVALVAGTPGLAVAADDWQAQVGEALGKAGA
Ga0310914_111063761	3300033289	Soil	MQLHLRQLALVAFAAGAPGLAVAADDWQAQVGEALGKTGATTPGGIYR
Ga0318519_100290861	3300033290	Soil	MSLHVRELALVALLAGAPGVAVAADDWQTQVGEALGKTGATVPGGIYRVG
Ga0318519_103123322	3300033290	Soil	MWLHLRQLALLAIVAGAPGVAIAADDWQAQVGDALGKTGATTPGGIYRVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074664

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences