NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074891

Metagenome / Metatranscriptome Family F074891

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074891
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 61 residues
Representative Sequence MSAVTHDVIVKRKPGKKRRKGIAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDS
Number of Associated Samples 75
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.35 %
% of genes near scaffold ends (potentially truncated) 26.89 %
% of genes from short scaffolds (< 2000 bps) 83.19 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (78.992 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands
(22.689 % of family members)
Environment Ontology (ENVO) Unclassified
(40.336 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(35.294 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.73%    β-sheet: 0.00%    Coil/Unstructured: 52.27%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF13511DUF4124 25.21
PF00854PTR2 4.20
PF03099BPL_LplA_LipB 3.36
PF12038DUF3524 1.68
PF04359DUF493 1.68
PF13417GST_N_3 0.84
PF12697Abhydrolase_6 0.84
PF00300His_Phos_1 0.84
PF01903CbiX 0.84
PF00990GGDEF 0.84
PF13602ADH_zinc_N_2 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG3104Dipeptide/tripeptide permeaseAmino acid transport and metabolism [E] 4.20
COG0095Lipoate-protein ligase ACoenzyme transport and metabolism [H] 3.36
COG0321Lipoate-protein ligase BCoenzyme transport and metabolism [H] 3.36
COG0340Biotin-protein ligaseCoenzyme transport and metabolism [H] 3.36
COG2921Putative lipoate-binding regulatory protein, UPF0250 familySignal transduction mechanisms [T] 1.68

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.99 %
UnclassifiedrootN/A21.01 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000118|TDF_OR_ARG05_123mDRAFT_c1006027All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1103Open in IMG/M
3300000122|TDF_OR_ARG04_123mDRAFT_c1017946All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium671Open in IMG/M
3300000124|BS_KBA_SWE12_21mDRAFT_c10027768All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1677Open in IMG/M
3300000124|BS_KBA_SWE12_21mDRAFT_c10068873All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium908Open in IMG/M
3300000125|TDF_MC_ARG01_113mDRAFT_c1021402Not Available509Open in IMG/M
3300001685|JGI24024J18818_10112780All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Methylophaga → unclassified Methylophaga → Methylophaga sp. SB9B856Open in IMG/M
3300003885|Ga0063294_10121813All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2009Open in IMG/M
3300003885|Ga0063294_10159685All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1447Open in IMG/M
3300003885|Ga0063294_10381119All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium860Open in IMG/M
3300003885|Ga0063294_10763412Not Available567Open in IMG/M
3300003885|Ga0063294_10766459Not Available566Open in IMG/M
3300003988|Ga0055475_10004099All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3433Open in IMG/M
3300003988|Ga0055475_10016464All Organisms → cellular organisms → Bacteria1977Open in IMG/M
3300004007|Ga0055476_10053068All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1281Open in IMG/M
3300004007|Ga0055476_10303943All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium564Open in IMG/M
3300004007|Ga0055476_10380612All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium503Open in IMG/M
3300004021|Ga0055449_10119614All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium870Open in IMG/M
3300004030|Ga0055444_10000116All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria10334Open in IMG/M
3300004049|Ga0055493_10174326All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium502Open in IMG/M
3300004065|Ga0055481_10364144Not Available613Open in IMG/M
3300004070|Ga0055488_10188880All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Methylophaga → unclassified Methylophaga → Methylophaga sp. SB9B553Open in IMG/M
3300004071|Ga0055486_10133421Not Available592Open in IMG/M
3300004073|Ga0055516_10024983All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1067Open in IMG/M
3300004073|Ga0055516_10080103All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium721Open in IMG/M
3300004074|Ga0055518_10138179All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium607Open in IMG/M
3300004074|Ga0055518_10217604All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium505Open in IMG/M
3300004097|Ga0055584_102353040Not Available540Open in IMG/M
3300004147|Ga0055515_10034911All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1062Open in IMG/M
3300004147|Ga0055515_10085213All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium787Open in IMG/M
3300004148|Ga0055521_10105598All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium704Open in IMG/M
3300004148|Ga0055521_10155657All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium610Open in IMG/M
3300005588|Ga0070728_10203044All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1111Open in IMG/M
3300005588|Ga0070728_10575846All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium584Open in IMG/M
3300005590|Ga0070727_10581216Not Available627Open in IMG/M
3300005601|Ga0070722_10053769All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1441Open in IMG/M
3300005601|Ga0070722_10289147All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium698Open in IMG/M
3300005612|Ga0070723_10121321All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1135Open in IMG/M
3300005612|Ga0070723_10330052All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium726Open in IMG/M
3300005753|Ga0077776_1001314All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1292Open in IMG/M
3300005832|Ga0074469_10479115All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium932Open in IMG/M
3300005920|Ga0070725_10411292All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium603Open in IMG/M
3300006467|Ga0099972_11690165All Organisms → cellular organisms → Bacteria → Proteobacteria930Open in IMG/M
3300006467|Ga0099972_12988966All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium794Open in IMG/M
3300006467|Ga0099972_13646804All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1158Open in IMG/M
3300008410|Ga0115361_10031194All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Methylophaga → unclassified Methylophaga → Methylophaga sp. SB9B575Open in IMG/M
3300009035|Ga0102958_1136750All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium788Open in IMG/M
3300009506|Ga0118657_10348429All Organisms → cellular organisms → Bacteria → Proteobacteria1969Open in IMG/M
3300009509|Ga0123573_10023811All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales6815Open in IMG/M
3300009702|Ga0114931_10016987All Organisms → cellular organisms → Bacteria → Proteobacteria8276Open in IMG/M
3300010330|Ga0136651_10022867All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3425Open in IMG/M
3300010392|Ga0118731_100293577All Organisms → cellular organisms → Bacteria → Proteobacteria821Open in IMG/M
3300010392|Ga0118731_102820196Not Available737Open in IMG/M
3300010392|Ga0118731_103662527Not Available597Open in IMG/M
3300010392|Ga0118731_114709519All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium975Open in IMG/M
3300010430|Ga0118733_104674320All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium728Open in IMG/M
3300010430|Ga0118733_106983511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium587Open in IMG/M
3300013101|Ga0164313_10016932All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae6250Open in IMG/M
3300013101|Ga0164313_10076771All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2810Open in IMG/M
3300013101|Ga0164313_10135473All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2080Open in IMG/M
3300013101|Ga0164313_10191673All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1726Open in IMG/M
3300013101|Ga0164313_10878817All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium733Open in IMG/M
3300019697|Ga0194007_1019300Not Available666Open in IMG/M
3300019719|Ga0193977_1057217Not Available529Open in IMG/M
3300019747|Ga0193978_1085179Not Available505Open in IMG/M
3300019748|Ga0194018_1015863All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1024Open in IMG/M
3300021346|Ga0210335_1131175Not Available670Open in IMG/M
3300022306|Ga0224509_10145848All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium837Open in IMG/M
3300022384|Ga0210321_1083034All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium502Open in IMG/M
(restricted) 3300022938|Ga0233409_10059493All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1136Open in IMG/M
(restricted) 3300023210|Ga0233412_10443745All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium584Open in IMG/M
(restricted) 3300023276|Ga0233410_10183873All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium668Open in IMG/M
(restricted) 3300024340|Ga0255042_10203616Not Available617Open in IMG/M
3300025565|Ga0210110_1061607All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium908Open in IMG/M
3300025599|Ga0210074_1000107All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria34851Open in IMG/M
3300025599|Ga0210074_1032405All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1490Open in IMG/M
3300025798|Ga0210063_1025456All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1168Open in IMG/M
3300025813|Ga0210064_1140724All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium580Open in IMG/M
3300025883|Ga0209456_10148042All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1019Open in IMG/M
3300025947|Ga0210067_1018747All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium898Open in IMG/M
3300025970|Ga0210081_1068413All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium522Open in IMG/M
3300026007|Ga0210124_1034527All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1756Open in IMG/M
3300027790|Ga0209273_10027288All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2755Open in IMG/M
3300027820|Ga0209578_10194280All Organisms → cellular organisms → Bacteria → Proteobacteria969Open in IMG/M
3300027820|Ga0209578_10546925Not Available516Open in IMG/M
3300027845|Ga0209271_10254205Not Available708Open in IMG/M
3300027845|Ga0209271_10364940Not Available573Open in IMG/M
3300027858|Ga0209013_10017920All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5507Open in IMG/M
3300027858|Ga0209013_10037794All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3502Open in IMG/M
3300027858|Ga0209013_10402877All Organisms → cellular organisms → Bacteria → Proteobacteria757Open in IMG/M
3300027858|Ga0209013_10548387Not Available615Open in IMG/M
3300027917|Ga0209536_100058397All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5018Open in IMG/M
3300027978|Ga0209165_10139603All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium845Open in IMG/M
(restricted) 3300028045|Ga0233414_10042683All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1848Open in IMG/M
3300028598|Ga0265306_10261083All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300028598|Ga0265306_10520597All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium653Open in IMG/M
3300028598|Ga0265306_10684623Not Available566Open in IMG/M
3300028599|Ga0265309_10160727All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1383Open in IMG/M
3300028599|Ga0265309_10697191Not Available689Open in IMG/M
3300028600|Ga0265303_10121980All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1935Open in IMG/M
3300028600|Ga0265303_10383670Not Available1113Open in IMG/M
3300028600|Ga0265303_11792672Not Available514Open in IMG/M
3300031665|Ga0316575_10050996All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1648Open in IMG/M
3300032136|Ga0316201_10094649All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2602Open in IMG/M
3300032136|Ga0316201_11628764Not Available533Open in IMG/M
3300032231|Ga0316187_10006592All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria9975Open in IMG/M
3300032231|Ga0316187_10013003All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7003Open in IMG/M
3300032251|Ga0316198_10004027All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria8997Open in IMG/M
3300032251|Ga0316198_10053524All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2433Open in IMG/M
3300032251|Ga0316198_10179183All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1233Open in IMG/M
3300032258|Ga0316191_10002175All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria14148Open in IMG/M
3300032258|Ga0316191_11321919All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium521Open in IMG/M
3300032259|Ga0316190_10846672All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium603Open in IMG/M
3300032260|Ga0316192_10291384All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1124Open in IMG/M
3300032260|Ga0316192_10984745All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium564Open in IMG/M
3300032262|Ga0316194_10167436All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1412Open in IMG/M
3300032262|Ga0316194_10832326Not Available581Open in IMG/M
3300032272|Ga0316189_10800938Not Available716Open in IMG/M
3300033429|Ga0316193_10242417All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1428Open in IMG/M
3300033429|Ga0316193_11072757All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium640Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands22.69%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment13.45%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow8.40%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment6.72%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine5.88%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment5.88%
Hydrothermal VentsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vents4.20%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment4.20%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine4.20%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment3.36%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.36%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine2.52%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.68%
MarineEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine1.68%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.68%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.84%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.84%
Deep-Sea Hydrothermal VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Deep-Sea Hydrothermal Vent0.84%
Marine Hydrothermal VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent0.84%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.84%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.84%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.84%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.84%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.84%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.84%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000118Marine microbial communities from chronically polluted sediments in Tierra del Fuego - site OR sample ARG 06_12.3mEnvironmentalOpen in IMG/M
3300000122Marine microbial communities from chronically polluted sediments in Tierra del Fuego - site OR sample ARG 04_12.3mEnvironmentalOpen in IMG/M
3300000124Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21mEnvironmentalOpen in IMG/M
3300000125Marine microbial communities from chronically polluted sediments in Tierra del Fuego - site MC sample ARG 01_11.3mEnvironmentalOpen in IMG/M
3300001685Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2EnvironmentalOpen in IMG/M
3300003885Black smoker hydrothermal vent sediment microbial communities from the Guaymas Basin, Mid-Atlantic Ridge, South Atlantic Ocean - Sample 1EnvironmentalOpen in IMG/M
3300003988Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2EnvironmentalOpen in IMG/M
3300004007Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2EnvironmentalOpen in IMG/M
3300004021Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1EnvironmentalOpen in IMG/M
3300004030Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2EnvironmentalOpen in IMG/M
3300004049Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004065Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2EnvironmentalOpen in IMG/M
3300004070Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004073Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2EnvironmentalOpen in IMG/M
3300004074Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004147Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2EnvironmentalOpen in IMG/M
3300004148Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005590Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2EnvironmentalOpen in IMG/M
3300005601Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1EnvironmentalOpen in IMG/M
3300005612Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2EnvironmentalOpen in IMG/M
3300005753Microbial community analysis of hydrothermal vent diffuse flow samples from Mid-Cayman Rise, Pacific Ocean - mega-assemblyEnvironmentalOpen in IMG/M
3300005832Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBBEnvironmentalOpen in IMG/M
3300005920Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300008410Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC5TEnvironmentalOpen in IMG/M
3300009035Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D1_MGEnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300009702Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV14_V59a metaGEnvironmentalOpen in IMG/M
3300010330Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaGEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300019697Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_3-4_MGEnvironmentalOpen in IMG/M
3300019719Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_4-5_MGEnvironmentalOpen in IMG/M
3300019747Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_5-6_MGEnvironmentalOpen in IMG/M
3300019748Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_4-5_MGEnvironmentalOpen in IMG/M
3300021346Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.374 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022306Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_24EnvironmentalOpen in IMG/M
3300022384Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022938 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024340 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_5EnvironmentalOpen in IMG/M
3300025565Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025599Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025798Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025813Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025883Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)EnvironmentalOpen in IMG/M
3300025947Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025970Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026007Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300027790Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027845Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027858Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027978Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028598Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300031665Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3Host-AssociatedOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032258Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cmEnvironmentalOpen in IMG/M
3300032259Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2EnvironmentalOpen in IMG/M
3300032260Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrowEnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032272Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrowEnvironmentalOpen in IMG/M
3300033429Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
TDF_OR_ARG05_123mDRAFT_100602713300000118MarineMSAVTEDVISKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKENIYDVFADDDDGPLNI*
TDF_OR_ARG04_123mDRAFT_101794613300000122MarineMSAVTPDVIVDRKPGKKRRKGLAALRKLRNALARRKLEEMREEELLKEQIYDVFADPEDSE*
BS_KBA_SWE12_21mDRAFT_1002776813300000124MarineMSAVTHDVLVKRSPGKKRSKRMSALRKLRAALARRKLEVMHEEELLQEQIYDVFADAEESK*
BS_KBA_SWE12_21mDRAFT_1006887323300000124MarineMSAVTHDVLVKRSPGKKRSKRMSALRKLRAALARRKLEVMHEEELLQEQIYDVFADAEES
TDF_MC_ARG01_113mDRAFT_102140213300000125MarineMSAVTEDVISKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKENIYDVFADD
JGI24024J18818_1011278023300001685MarineMSAVTHDVIVKRKPGKKRRKGIAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDSK*
Ga0063294_1012181333300003885Hydrothermal VentsMSAVTHDVVLKPATDKKRKKGAVALRALRRALARRKLEQMRDEELLREQIYDVFEDGEDPG*
Ga0063294_1015968543300003885Hydrothermal VentsMSAVTHDVVLKPKAGKKRKKGTAALRALRKALARRKLEQIRDEELLQEQIYDVFEIKDDTG*
Ga0063294_1038111923300003885Hydrothermal VentsMSAVTHDVIEKTRTGKKRRKSLSALRKIRNALARRKLEEMHEEQLLQEQIYDVFAEAGDVKK*
Ga0063294_1076341213300003885Hydrothermal VentsMSAVTHDVVLKPKADRKRKKGTAALRSLRKALARRKLEQIRDEELLQEQIYDVFEDKDGSG*
Ga0063294_1076645913300003885Hydrothermal VentsMSAVTHDVVLKPGTNKKRKKGAAALRALRKALARRKLEQIRDEELLQEQIYDVFEDRDDAG*
Ga0055475_1000409943300003988Natural And Restored WetlandsMSTVTHDVVLKPRARKKRNKGVAALRMLRRALARRKLEQMRDEELLREQIYDVFEDKGGPG*
Ga0055475_1001646443300003988Natural And Restored WetlandsMSAVTHDVIVKRSRGKKRRKSMSALRKLRAAMARRKLEEMHEEEILKEQIYDVFADPEESS*
Ga0055476_1005306823300004007Natural And Restored WetlandsMSVVTHDVVLKRKPRKKRGKGEAALRSLRRAMARRKLEQMREDEILQEQIYDVFEEETTK
Ga0055476_1030394323300004007Natural And Restored WetlandsMSVVTHDVVLKRKPRKKRGKGEAAMRTLRRALARRKLEQMREDEILQEQIYDVFEDETTGKA*
Ga0055476_1038061223300004007Natural And Restored WetlandsHDVVLKRKPRKKRGKGEAALRSLRRAMARRKLEQMREDEILHEQIYDVFEEETTEKG*
Ga0055449_1011961423300004021Natural And Restored WetlandsMSAVTHDVIVKRSRGKKRRKSMSALRKLRAAMARRKLEEMHEEEILKEQIYDVFADSEESS*
Ga0055444_1000011653300004030Natural And Restored WetlandsMSVVTEDVILNRKPRKKRGKGMATLRKIRRALARKKLEEMHEEQVLKENIYDVFADGDDEALDI*
Ga0055493_1017432613300004049Natural And Restored WetlandsMSVVTHDVVLKRKPRKKRGKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEAGKKA*
Ga0055481_1036414413300004065Natural And Restored WetlandsMSTVTHDVVLKPRARKKRNKGVAALRMLRRALARRKLEQMRDEELLREQIY
Ga0055488_1018888013300004070Natural And Restored WetlandsNWWGNNQGDNTMSAVTHDVLVKRSPGKKRSKRMSALRKLRAALARRKLEVMHEEELLQEQIYDVFADAEESK*
Ga0055486_1013342113300004071Natural And Restored WetlandsMSVVTHDVVLKRKSRKKRGKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEAGKKA*
Ga0055516_1002498333300004073Natural And Restored WetlandsMSAVTHDVIVKRRPGKKRRKSMSALRKLRNALARRRLEEMHEEELLQEQIYDVFADPEKSK*
Ga0055516_1008010313300004073Natural And Restored WetlandsDVVLKRKPGKRRRKGMAALRKLRRALARKKLEEMRDDELLKQQIYDVFAEADDAENA*
Ga0055518_1013817923300004074Natural And Restored WetlandsPPRGQEMSAVTHDIVRKPRAGKKRKQGIAALRMLRRALARRKLEQMRDEELLREQIYDVFEDKSGPG*
Ga0055518_1021760413300004074Natural And Restored WetlandsMSAVTHDVVLKRKPRKKRNKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEAGKKA*
Ga0055584_10235304013300004097Pelagic MarineMSAVTHDAVVKRSPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQIYDVFADT
Ga0055515_1003491113300004147Natural And Restored WetlandsMSVVTHDAVLKRKPRKKRGKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEASKES*
Ga0055515_1008521323300004147Natural And Restored WetlandsMSVVTHDVVLKRKPRKKRSKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEPSEKT*
Ga0055521_1010559823300004148Natural And Restored WetlandsMSAVSHDVIVKRSRGKKRRKSMSALRKLRAALARRKLEEMHEEELLQE
Ga0055521_1015565723300004148Natural And Restored WetlandsKAMSVVTHDAVLKRKPRKKRGKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEASKES*
Ga0070728_1020304423300005588Marine SedimentMSAVTPDVIVDRKPGKKRRKGLAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDSK*
Ga0070728_1057584623300005588Marine SedimentMSAVTHDVIVKSKPGKKRRKGMAALRKLRNAMARRKLEEMREEELLQEQIYDVFSDAEDSK*
Ga0070727_1058121613300005590Marine SedimentMSVVTEDVVLNRKPRKKRGKGMAALRKIRRAMARKKLEEMHEEQVLKENIYDVFADGDDEAVDI*
Ga0070722_1005376933300005601Marine SedimentMSAVTHDVIVKRKPGKKRRKGMAALRKLRNALARRKLEEMREEELLQEQIFDVFAEPEDSK*
Ga0070722_1028914733300005601Marine SedimentMSAVTPDVIVDRKPGKKRRKGMAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDSK*
Ga0070723_1012132123300005612Marine SedimentMSAVTHDVIVKRKPGKKRRKGLAALRKIRNAMARRKLEEMREEELLQEQIYDVFSDAEDSK*
Ga0070723_1033005233300005612Marine SedimentDVIVDRKPGKKRRKGLAALRKLRNALARRKLEEMREEELLKEQIYDVFADPEDSE*
Ga0077776_100131413300005753Deep-Sea Hydrothermal VentMSAVTHDVVPKIKTRKKRAKGVAALRKIRRALARKKLEEMHEEKILKENIYDVFSDEDDPINI*
Ga0074469_1047911513300005832Sediment (Intertidal)MSVVTHDVVLKRKPRKKRGKGEAALRTLRRALARRTLEQMREDEILHEQIYDVFEDDTTSKA*
Ga0070725_1041129213300005920Marine SedimentVKKRCQWGCNRPGGNTMSAVTPDVIVDRKPGKKRRKGLAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDSK*
Ga0099972_1169016513300006467MarineTMSAVTHDVIVKRKPGKKRRKGMAALRKLRNALARRKLEEMREEELLQEQIFDVFAEPEDSK*
Ga0099972_1298896623300006467MarineMSAVTHDVIVKRKPGKKRRKGMAALRKLRNAMARRKLEEMHEEELLQEQIFDVFADPEDSK*
Ga0099972_1364680433300006467MarineMSAVTEDVVQNRKPRKKRAKGVAALRKIRRALARKKLEEMREEEILKENIYDVFADEDDGPVNI*
Ga0115361_1003119413300008410SedimentMSAVTHDVIVKRKPGKKRRKGLAALRKLRNAMARRKLEQMREEELLQEQIYDVFADTEDSK*
Ga0102958_113675013300009035SoilMSAVTEDVIPKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKENIYDVFADDDDGPLNI*
Ga0118657_1034842913300009506Mangrove SedimentNPAGFFIFGLAKGGNFMSVVTHDVVLKRKPGKRRRKGMAALRKLRRALARKKLEEMRDDELLKQQIYDVFAEADDAENA*
Ga0123573_10023811103300009509Mangrove SedimentMSVVTHDVVLKRKPGKRRRKGMAALRKLRRALARKKLEEMRDDELLKQQIYDVFAEADDAENA*
Ga0114931_10016987123300009702Deep SubsurfaceMSAVTHDVIVKNSTGKKRRKSVSALRKIRNALARRKLEEMHEEELLQEQIFDVFADVGDAKE*
Ga0136651_1002286713300010330Marine Hydrothermal VentMSAVTPDVIIDRKPGKKRRKGLAALRKIRNALARRKLEEMHEEELLKEQLYDVFADPEDSK*
Ga0118731_10029357713300010392MarineEKRCKWGYNRPGGNTMSAVTHDVIVKRKPGKKRRKGMAALRKLRNAMARRKLEEMHEEELLQEQIFDVFADPEDSK*
Ga0118731_10282019613300010392MarineMGVVTEDVIFNRKPRKKRGKGVAALRKIRRALARKKLEEMHEEQVLKENIYDVFADEGDDPVNI*
Ga0118731_10366252713300010392MarineMSAVTHDVVLKPKAGKKRNKGVAALRTLRRALARRKLEQMRDEELLKEQIYDVFEDAEDSG*
Ga0118731_11470951913300010392MarineSTMSAVTEDVIPKRKPRKKRGKGIAALRKIRRAMARKKLEEMHEEQVLKENIYDVFADEEDGPVNT*
Ga0118733_10467432013300010430Marine SedimentPPRGHEMSAVTHDVVVKPKKGKKRNKGVAALRTLRRALARRKLEQMRDEELLREQIYDVFEDNGED*
Ga0118733_10698351123300010430Marine SedimentMSAVTHDVIIKRKPGKKRRKSVSALRKLRNALARRKLEEMHEEELLKEQIYDVFADPEGSGKD*
Ga0164313_1001693263300013101Marine SedimentMSAVTEDIIPKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKDNIYDVFADEDDGPVNI*
Ga0164313_1007677153300013101Marine SedimentMSAVTEDVIPKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKDNIYDVFADEDDGPINI*
Ga0164313_1013547343300013101Marine SedimentMSAVTHDVVLKPRKGKKRNKGVAALRTLRRALARKKLEEMRDEELLQEQIYDVFEDHGESD*
Ga0164313_1019167333300013101Marine SedimentMSAVTPDVIIDRKPGKKRRKGLAALRKIRNALARRKLEEMREEELLKEQIYDVFAEPEDSK*
Ga0164313_1087881733300013101Marine SedimentTMSAVTPDVIIDRKPGKKRRKGLAALRKIRNALARRKLEEMREEELLKEQIYDVFAEPEDSK*
Ga0194007_101930013300019697SedimentMSAVTHDVVLKTKSGKKRRKSVSALRKIRNALARRKLEEMHEEEVLKEQIYDVFADPDDESKP
Ga0193977_105721713300019719SedimentMSAVTEDVIPKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKENIYDVFADDDDGPLNI
Ga0193978_108517913300019747SedimentMSAVTHDVVLKTKSGKKRRKSVSALRKIRNALARRKLEEMHEEEVLKEQIYDVFADPDDG
Ga0194018_101586313300019748SedimentMSAVTHDVVLKTKSGKKRRKSVSALRKIRNALARRKLEEMHEEEVLKEQIYDVFADPDDE
Ga0210335_113117513300021346EstuarineMSVVTHDVVLKRKPRKKRGKGEAALRTLRRALARRTLEQMREDEILHEQIYDVFEDDTTSKA
Ga0224509_1014584823300022306SedimentMGVVTEDVILNKKPRKKRGKGVAALRKIRRALARKKLEEMHEEQVLKENIYDVFADEGDDPVNI
Ga0210321_108303423300022384EstuarineGKAMSVVTHDVVLKRKPRKKRGKGEAALRTLRRALARRTLEQMREDEILHEQIYDVFEDDTTSKA
(restricted) Ga0233409_1005949313300022938SeawaterMSAVTHDVVLKPKKGKKRNKGVAALRTLRRALARRKLEQMRDEELLREQIYDVFEDNGED
(restricted) Ga0233412_1044374513300023210SeawaterVTEDVIPKRKPRKKRGKGIAALRKIRRALARKKLEEMHEEQVLKENIYDVFADDDDGPLN
(restricted) Ga0233410_1018387313300023276SeawaterMSVVTEDVVLNRKPRKKRGKGMAALRKIRRAMARKKLEEMHEEQVLKENIYDVFADGDDEAVDI
(restricted) Ga0255042_1020361613300024340SeawaterMSAVTRDVVLKPKKGKKRNKGVAALRTLRRALARRKLEQMRDEELLREQIYDVFEDNGED
Ga0210110_106160713300025565Natural And Restored WetlandsMSAVTHDVIVKRSRGKKRRKSMSALRKLRAAMARRKLEEMHEEEILKEQIYDVFADSEES
Ga0210074_100010723300025599Natural And Restored WetlandsMSAVTHDVIVKRSRGKKRRKSMSALRKLRAAMARRKLEEMHEEEILKEQIYDVFADPEES
Ga0210074_103240543300025599Natural And Restored WetlandsMSVVTEDVILNRKPRKKRGKGMATLRKIRRALARKKLEEMHEEQVLKENIYDVFADGDDEALDI
Ga0210063_102545623300025798Natural And Restored WetlandsMSTVTHDVVLKPRARKKRNKGVAALRMLRRALARRKLEQMRDEELLREQIYDVFEDKGGP
Ga0210064_114072423300025813Natural And Restored WetlandsMSVVTHDVVLKRKPRKKRGKGEAAMRTLRRALARRKLEQMREDEILQEQIYDVFEDETTGKA
Ga0209456_1014804223300025883Pelagic MarineMSAVTHDVVVKRSPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQIYDVFADTEEP
Ga0210067_101874713300025947Natural And Restored WetlandsMSVVTHDVVLKRKPRKKRGKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEAGKKA
Ga0210081_106841313300025970Natural And Restored WetlandsMSAVTHDVVLKRKPRKKRNKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEAGKKA
Ga0210124_103452743300026007Natural And Restored WetlandsMSAVTHDVIVKRSRGKKRRKSMSALRKLRAAMARRKLEEMHEEEILKEQ
Ga0209273_1002728823300027790Marine SedimentMSAVTHDVVVKPKKGKKRNKGVAALRTLRRALARRKLEQMRDEELLREQIYDVFEDNGED
Ga0209578_1019428013300027820Marine SedimentMSAVTHDVIVKRKPGKKRRKGMAALRKLRNAMARRKLEEMHEEELLQEQIFDVFADPEDS
Ga0209578_1054692513300027820Marine SedimentMSAVTHDVIVKRKPGKKRRKGLAALRKIRNAMARRKLEEMREEELLQEQIYDVFSD
Ga0209271_1025420523300027845Marine SedimentMSAVTPDVIVDRKPGKKRRKGLAALRKLRNALARRKLEEMREEELLKEQIYDVFADPEDS
Ga0209271_1036494013300027845Marine SedimentMSAVTHDVIVKRKPGKKRRKGLAALRKIRNAMARRKLEEMREEELLQEQIYDVFSDAEDS
Ga0209013_1001792053300027858MarineMSAVTPDVIVDHKPGKKRRKGLAALRKIRNALARRKLEEMHEEELLKEQIYDVFADPEDS
Ga0209013_1003779443300027858MarineMSAVTHDVIVKRKPGKKRRKGIAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDS
Ga0209013_1040287723300027858MarineMSAVTPDVIVDRKPGKKRRKGMAALRKIRNALARRKLEEMREEELLKEQIYDVFADPEDS
Ga0209013_1054838723300027858MarineMSAVTPDVIIERKPGKKRRKGLAALRKIRNALARRKLEEMREEELLKEQIYDVFADPE
Ga0209536_10005839773300027917Marine SedimentMSAVTHDVVLKTKSGKKRRKSVSALRKIRNALARRKLEEMHDEELLQEQIYDVFADIDDD
Ga0209165_1013960323300027978Marine SedimentMSVVTEDVVLNRKQRKKRGKGMAALRKIRRAMARKKLEEMHEEQVLKENIYDVFADGDDEAVDI
(restricted) Ga0233414_1004268313300028045SeawaterMSVVTEDVVLNRKPRKKRGKGMAALRKIRRAMARKKLEEMHEEQVLKENIYDVFADGDD
Ga0265306_1026108333300028598SedimentMSAVVHDVILKPKTGKKRSKANKALRAVRRALARRKLEQMRDDQLLQEQIYDVFEDGGEA
Ga0265306_1052059723300028598SedimentEMSAVTHDVVLKPKAGKKRNKGVAALRTLRRALARRKLEQMRDEELLKEQIYDVFEDTDDSG
Ga0265306_1068462313300028598SedimentMSAVTHDVIIKRKPGKKRRKSVSALRKLRNALARRKLEEMHEEELLQEQIYDVFADTEDSAKD
Ga0265309_1016072713300028599SedimentMGGNSQGDNTMSAVTHDVIVKRKPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQIYDVFADADESK
Ga0265309_1069719113300028599SedimentMSAVTHDVVLKPKAGKKRNKGVAALRTLRRALARRKLEQMRDEELLKEQIYDVFEDTDDS
Ga0265303_1012198023300028600SedimentMSAVTHDVIDKRKPGKKRRKSVSALRKLRNALARRKLEEMHEEELLQEQIYDVFADTEDSAKD
Ga0265303_1038367023300028600SedimentMSAVTHDVIVKRKPGKKRRKSMSALRKIRNALARRKLEEMHEEELLQEQIYDVFADAEEP
Ga0265303_1179267213300028600SedimentLTHDVVLKTKSGKKRRKSVSALRKIRNALARRKLEEMHEEEVLKEQIYDVFADPDDGK
Ga0316575_1005099633300031665RhizosphereMSAVTHDIVRKAKSGKRRKKGVAALRKLRRALARRKLEQMRDEELLQEQIYDVFGDVEESSS
Ga0316201_1009464933300032136Worm BurrowMSAVTHDVIVKRRPGKKRRKSMSALRKLRNALARRRLEEMHEEELLQEQIYDVFADPEKS
Ga0316201_1162876413300032136Worm BurrowMSAVTHDVIVKRKPGKKRRKSVSALRKLRNALARRKLEEMHEEELLQEQIYDVFADPEDPGKD
Ga0316187_10006592143300032231Worm BurrowMSAVTPDVIVDRKPGKKRRKGMAALRKLRNALARRKLEEMREEELLKEQIYDVFADPEDS
Ga0316187_1001300333300032231Worm BurrowMSAVTHDVIVKRSPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQIYDVFADSEKP
Ga0316198_10004027103300032251SedimentMSVVTHDAVLKRKPGKKRRKGMAALRKIRRALARKKLEEMHEDELLQEQIYDVFADEDGSGKT
Ga0316198_1005352443300032251SedimentMSAVTHDVIVKRRPGKKRRKSMGALRKIRNALARRKLEEMHEEELLQEQIYDVFADPEKS
Ga0316198_1017918313300032251SedimentMSAVTHDVIVKRKPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQIYDVFADADES
Ga0316191_1000217553300032258Worm BurrowMSVVTHDVVLKRKPRKKRSKGEAALRSLRRALARRKLELMREDEILHEQIYDVFEEEPSEKT
Ga0316191_1132191923300032258Worm BurrowHDVILKRKPGKKRRKGMATLRKIRRALARKKLEEMHEDELLQEQIYDVFADEDGSGKT
Ga0316190_1084667223300032259Worm BurrowEMSAVTHDVVLKPKAGKKRNKGVAALRTLRRALARRKLEQMRDEELLQEQIYDVFEDVDDSE
Ga0316192_1029138423300032260Worm BurrowMSAVTHDVVLKPKAGKKRNKGVAALRTLRRALARRKLEQMRDEELLQEQIYDVFEDVDDS
Ga0316192_1098474513300032260Worm BurrowMSVVTHDVILKRKPGKKRRKGMATLRKIRRALARKKLEEMHEDELLQEQIYDVFADEDGSGKT
Ga0316194_1016743633300032262SedimentMSAVTHDVIVKRKPGKKRRKSMGALRKIRNALARRKLEEMHEEELLQEQIYDVFADPEKS
Ga0316194_1083232613300032262SedimentMSVVTHDVVLKRKPRKKRSKGEAALRSLRRALARRKLELMREDEILHEQIYDV
Ga0316189_1080093813300032272Worm BurrowMSAVTHDVIVKRSPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQI
Ga0316193_1024241733300033429SedimentMMSAVTHDVIGKRRPGKKRRKSMSALRKLRNALARRRLEEMHEEELLQEQIYDVFADPENSK
Ga0316193_1107275723300033429SedimentMSAVTHDVIVKRSPGKKRRKSMSALRKLRNALARRKLEEMHEEELLQEQIYDVFADQEKS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.