Metagenome Family F074955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074955
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	49 residues
Representative Sequence	AKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Number of Associated Samples	75
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	93.28 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.059 % of family members)
Environment Ontology (ENVO)	Unclassified (63.025 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.580 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.33% β-sheet: 0.00% Coil/Unstructured: 50.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00406	ADK	4.20
PF13191	AAA_16	2.52
PF00440	TetR_N	2.52
PF03061	4HBT	2.52
PF13412	HTH_24	1.68
PF00903	Glyoxalase	1.68
PF13738	Pyr_redox_3	1.68
PF00881	Nitroreductase	1.68
PF09948	DUF2182	1.68
PF12680	SnoaL_2	0.84
PF07992	Pyr_redox_2	0.84
PF00270	DEAD	0.84
PF05199	GMC_oxred_C	0.84
PF02371	Transposase_20	0.84
PF01740	STAS	0.84
PF13006	Nterm_IS4	0.84
PF07969	Amidohydro_3	0.84
PF01381	HTH_3	0.84
PF13424	TPR_12	0.84
PF00690	Cation_ATPase_N	0.84
PF12840	HTH_20	0.84
PF07883	Cupin_2	0.84
PF08240	ADH_N	0.84
PF07690	MFS_1	0.84
PF13193	AMP-binding_C	0.84
PF07516	SecA_SW	0.84
PF04149	DUF397	0.84
PF00072	Response_reg	0.84
PF00106	adh_short	0.84
PF04960	Glutaminase	0.84
PF00196	GerE	0.84
PF03795	YCII	0.84
PF12802	MarR_2	0.84
PF09278	MerR-DNA-bind	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	4.20
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.84
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.84
COG2066	Glutaminase	Amino acid transport and metabolism [E]	0.84
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.84
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.34 %
Unclassified	root	N/A	38.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.34 %
Unclassified	root	N/A	38.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.34 %
Unclassified	root	N/A	38.66 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.26 %
Unclassified	root	N/A	38.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.90 %
Unclassified	root	N/A	38.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.57 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.68 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.66 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.84 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.66 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.84 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.84 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.84 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.84 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.84 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.84 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.84 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.84 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.84 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.66 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	5.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Geodermatophilus chilensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus chilensis	0.84 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	0.84 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	0.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.84 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.84 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.66 %
Streptomyces sp. PanSC9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Streptomyces sp. 2231.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 2231.1	0.84 %
Geodermatophilus chilensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus chilensis	0.84 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	0.84 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	0.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.84 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.84 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10559652	Not Available	666	Open in IMG/M
3300005764\|Ga0066903_101036819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1504	Open in IMG/M
3300005764\|Ga0066903_102497758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1000	Open in IMG/M
3300005764\|Ga0066903_103243583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	879	Open in IMG/M
3300005764\|Ga0066903_108522980	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300006354\|Ga0075021_10360299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300009792\|Ga0126374_11460915	Not Available	559	Open in IMG/M
3300009792\|Ga0126374_11564675	Not Available	543	Open in IMG/M
3300010043\|Ga0126380_12171087	Not Available	512	Open in IMG/M
3300010046\|Ga0126384_11090383	Not Available	731	Open in IMG/M
3300010047\|Ga0126382_12379234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300010048\|Ga0126373_11074760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300010048\|Ga0126373_12183792	Not Available	615	Open in IMG/M
3300010048\|Ga0126373_12418855	Not Available	585	Open in IMG/M
3300010048\|Ga0126373_12635252	Not Available	561	Open in IMG/M
3300010048\|Ga0126373_12901030	Not Available	535	Open in IMG/M
3300010358\|Ga0126370_10807090	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300010358\|Ga0126370_10891677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300010359\|Ga0126376_11514555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300010360\|Ga0126372_10466505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1175	Open in IMG/M
3300010361\|Ga0126378_10307842	Not Available	1688	Open in IMG/M
3300010361\|Ga0126378_10435805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1424	Open in IMG/M
3300010361\|Ga0126378_10687726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1135	Open in IMG/M
3300010361\|Ga0126378_10862817	Not Available	1013	Open in IMG/M
3300010361\|Ga0126378_11001919	All Organisms → cellular organisms → Bacteria → Terrabacteria group	939	Open in IMG/M
3300010361\|Ga0126378_13044534	Not Available	534	Open in IMG/M
3300010366\|Ga0126379_10887548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	994	Open in IMG/M
3300010376\|Ga0126381_101993649	Not Available	837	Open in IMG/M
3300010398\|Ga0126383_10672802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300010398\|Ga0126383_13200068	Not Available	535	Open in IMG/M
3300012357\|Ga0137384_10601336	Not Available	898	Open in IMG/M
3300012971\|Ga0126369_11859368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300016294\|Ga0182041_12254792	Not Available	509	Open in IMG/M
3300016319\|Ga0182033_10094503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus chilensis	2182	Open in IMG/M
3300016319\|Ga0182033_10418171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1137	Open in IMG/M
3300016357\|Ga0182032_11385022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300016357\|Ga0182032_11667608	Not Available	555	Open in IMG/M
3300016371\|Ga0182034_11066464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300016387\|Ga0182040_10610232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300016404\|Ga0182037_11430083	Not Available	612	Open in IMG/M
3300016422\|Ga0182039_10309282	Not Available	1312	Open in IMG/M
3300017959\|Ga0187779_10393463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300017970\|Ga0187783_10025690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4363	Open in IMG/M
3300017970\|Ga0187783_10094146	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300017972\|Ga0187781_10874858	Not Available	654	Open in IMG/M
3300021560\|Ga0126371_10061359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3629	Open in IMG/M
3300021560\|Ga0126371_10069127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3430	Open in IMG/M
3300021560\|Ga0126371_11162492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	909	Open in IMG/M
3300021560\|Ga0126371_13558023	Not Available	526	Open in IMG/M
3300027862\|Ga0209701_10159937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300031543\|Ga0318516_10689334	Not Available	580	Open in IMG/M
3300031544\|Ga0318534_10108448	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300031544\|Ga0318534_10370758	Not Available	823	Open in IMG/M
3300031546\|Ga0318538_10245246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300031546\|Ga0318538_10364127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300031546\|Ga0318538_10388791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	754	Open in IMG/M
3300031549\|Ga0318571_10088551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300031561\|Ga0318528_10591172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 2231.1	595	Open in IMG/M
3300031564\|Ga0318573_10136907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1278	Open in IMG/M
3300031572\|Ga0318515_10611972	Not Available	579	Open in IMG/M
3300031679\|Ga0318561_10058479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1949	Open in IMG/M
3300031682\|Ga0318560_10336277	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300031682\|Ga0318560_10579945	All Organisms → cellular organisms → Bacteria → Terrabacteria group	608	Open in IMG/M
3300031713\|Ga0318496_10027990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	2830	Open in IMG/M
3300031719\|Ga0306917_11591136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	502	Open in IMG/M
3300031723\|Ga0318493_10084885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1566	Open in IMG/M
3300031724\|Ga0318500_10625092	Not Available	546	Open in IMG/M
3300031747\|Ga0318502_10022902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3054	Open in IMG/M
3300031748\|Ga0318492_10734683	Not Available	529	Open in IMG/M
3300031765\|Ga0318554_10282637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	944	Open in IMG/M
3300031765\|Ga0318554_10398939	Not Available	781	Open in IMG/M
3300031765\|Ga0318554_10447415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300031770\|Ga0318521_10296419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	951	Open in IMG/M
3300031770\|Ga0318521_10587968	Not Available	673	Open in IMG/M
3300031771\|Ga0318546_10101984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1884	Open in IMG/M
3300031771\|Ga0318546_10296240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300031777\|Ga0318543_10217343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300031777\|Ga0318543_10461571	Not Available	569	Open in IMG/M
3300031779\|Ga0318566_10338828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	743	Open in IMG/M
3300031780\|Ga0318508_1155863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	649	Open in IMG/M
3300031781\|Ga0318547_10358029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	892	Open in IMG/M
3300031792\|Ga0318529_10057266	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300031792\|Ga0318529_10260318	Not Available	807	Open in IMG/M
3300031793\|Ga0318548_10456631	Not Available	625	Open in IMG/M
3300031796\|Ga0318576_10069184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1566	Open in IMG/M
3300031796\|Ga0318576_10445933	Not Available	611	Open in IMG/M
3300031798\|Ga0318523_10573596	Not Available	556	Open in IMG/M
3300031798\|Ga0318523_10683048	Not Available	504	Open in IMG/M
3300031799\|Ga0318565_10065953	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300031805\|Ga0318497_10345927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300031805\|Ga0318497_10430552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	738	Open in IMG/M
3300031821\|Ga0318567_10244297	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031821\|Ga0318567_10269185	Not Available	958	Open in IMG/M
3300031832\|Ga0318499_10338279	Not Available	579	Open in IMG/M
3300031846\|Ga0318512_10634287	Not Available	546	Open in IMG/M
3300031910\|Ga0306923_12069675	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031912\|Ga0306921_10045761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4955	Open in IMG/M
3300031912\|Ga0306921_10056590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4464	Open in IMG/M
3300031912\|Ga0306921_12189834	Not Available	583	Open in IMG/M
3300031942\|Ga0310916_11327182	Not Available	591	Open in IMG/M
3300031942\|Ga0310916_11585582	Not Available	532	Open in IMG/M
3300031946\|Ga0310910_11534277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PanSC9	510	Open in IMG/M
3300031954\|Ga0306926_10565339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1392	Open in IMG/M
3300032054\|Ga0318570_10310678	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300032063\|Ga0318504_10095145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300032066\|Ga0318514_10308300	Not Available	837	Open in IMG/M
3300032067\|Ga0318524_10237058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	937	Open in IMG/M
3300032076\|Ga0306924_10376058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300032094\|Ga0318540_10128089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1207	Open in IMG/M
3300032094\|Ga0318540_10321201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300032261\|Ga0306920_100042866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6550	Open in IMG/M
3300032261\|Ga0306920_101052510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1182	Open in IMG/M
3300032893\|Ga0335069_10101759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3628	Open in IMG/M
3300033289\|Ga0310914_11015837	Not Available	730	Open in IMG/M
3300033290\|Ga0318519_10351853	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.16%
Aquatic	Environmental → Aquatic	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.16%
Sediment	Environmental → Aquatic → Sediment	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.04%
Loam	Environmental → Terrestrial → Soil → Loam	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105596521	3300004633	Tropical Forest Soil	RGYFARQAERGQATDPQLLADQLIVVFDGAIVQAVMGTLRHPGAARSAAQALLDTHDIP*
Ga0066903_1010368192	3300005764	Tropical Forest Soil	PQRLADQLIVVFDGAIVQAVMGTMRHSDAARDAVQALLDAQGIP*
Ga0066903_1024977583	3300005764	Tropical Forest Soil	RGYFARQAKRGLAKDPQRLADQLIVVFDGAIVQAVMGTLAHSDAARSAVQVLLDAHGIP*
Ga0066903_1032435831	3300005764	Tropical Forest Soil	ADQLIVVFDGAIVQAVMGTMAHSDAARDAVQALLDAHGIP*
Ga0066903_1085229801	3300005764	Tropical Forest Soil	RGQAKDPQRLADQLIVVFDGAIVQAVIGTLHHPDAARSAVQALLDTHGIP*
Ga0075021_103602992	3300006354	Watersheds	LRLRDYFARQAGRGGAEHPAELADQLIVVFDGAIVQAVMGTGVQAGAARNAVQALLDAQGMAPP*
Ga0126374_114609152	3300009792	Tropical Forest Soil	GQATDPQLLADQLIVVFDGAIVQAVMGTLRHPGAARSAAQALLDTHGIP*
Ga0126374_115646751	3300009792	Tropical Forest Soil	PQLLADQLIVVFDGAIVQAVMGTLRHPGAARSAAQALLDTHDIP*
Ga0126380_121710871	3300010043	Tropical Forest Soil	QRLADQLIVVFDGAIVQAVMGTIRHSDAARSAAQALLDAHGIP*
Ga0126384_110903831	3300010046	Tropical Forest Soil	QQLADQLIVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVH*
Ga0126382_123792341	3300010047	Tropical Forest Soil	GQAKDPQRLADQLIVVFDGAIVQAVMGTMRHSDAARSAVQALLAAHGIP*
Ga0126373_110747603	3300010048	Tropical Forest Soil	LADQLIVVFDGAIVQAVMGTMRHSDAARDAVQALLDAHGIP*
Ga0126373_121837921	3300010048	Tropical Forest Soil	VVFDGAIVQAVMGTLRHSDAARGAVQALLDAHGIP*
Ga0126373_124188551	3300010048	Tropical Forest Soil	AERGQAKDPQRLADQLIIVFDGAVVQAVMGTMRHSDAARSAVQALLDAHGIPKPGGSNPG
Ga0126373_126352521	3300010048	Tropical Forest Soil	RQAERGQAKDPERLADQLIVVFDGAIVQAVMGTIAPSDAARSAVQALLDSHGIP*
Ga0126373_129010302	3300010048	Tropical Forest Soil	LRGYFARQAERGQAKDPQRLADQLIVVFDGAIVQAVMGTMAHSDAARDAVQALLDAHGIP
Ga0126370_108070902	3300010358	Tropical Forest Soil	ADQLIVVFVGAIVQAVMGTLAHSDAARSAAQVLLDAHGIP*
Ga0126370_108916771	3300010358	Tropical Forest Soil	DQLIIVFDGAIVQAVMGTMRHSDAARSAAQALLDAHGIP*
Ga0126376_115145552	3300010359	Tropical Forest Soil	LRGYFARQAERGQATDPQRLADQLIVVFDGAIVQAVIGTMTHSDAARDAVQALLNAHGIP
Ga0126372_104665053	3300010360	Tropical Forest Soil	LIVVFDGAIVQAVMGTMRHSDAARSAVQALLDAHGIP*
Ga0126372_114163651	3300010360	Tropical Forest Soil	DQLVIIFDGAIVQAVMGTGRRADAALTAASALLDAQHLD*
Ga0126378_103078421	3300010361	Tropical Forest Soil	AKDPQRLADQLIIVFDGAIVQAVIGTIAPSDAARDAVQALLDAHGIP*
Ga0126378_104358052	3300010361	Tropical Forest Soil	LETSDRRCGLAKDPQRLADELIVVFDGAIVQAVMGTTRHPDAARTAVHALLDAHSVP*
Ga0126378_106877262	3300010361	Tropical Forest Soil	VVFDGAIVQAVIGTMTHSDAARDAVQALLDAHGIP*
Ga0126378_108628172	3300010361	Tropical Forest Soil	PQRLADQLIIVFDGAIVQAVMGTMRHSDAARSAAQALLDAHGIP*
Ga0126378_110019193	3300010361	Tropical Forest Soil	RHAERGQAKDPQRLADQLMVVFDGAIVQAVMGTMRHSDAARSAVQALLDAHGIP*
Ga0126378_130445342	3300010361	Tropical Forest Soil	VVFDGAIVQAVMGTMHHCDAARSAAQALLDAHGIP*
Ga0126379_108875483	3300010366	Tropical Forest Soil	GQATDPQRLADQLLVVFDGAIVQAVIGTITHSDAARDAVQALLDAHGIP*
Ga0126381_1019936491	3300010376	Tropical Forest Soil	QRLADQLIVVFDGAIVQAVIGTMTHSDAARDAVQALLDAHGIP*
Ga0126383_106728022	3300010398	Tropical Forest Soil	MVVFDGAIVQAVMGTMRHSDAARSAVQALLDAHGIP*
Ga0126383_132000681	3300010398	Tropical Forest Soil	QAKDPQRLADQLIVVFDGAIVQAVMGTMRHSDAARSAAQALLDAHGIP*
Ga0137384_106013362	3300012357	Vadose Zone Soil	ADQLIVVFDGIIVQAVMGTAPHADAARTAVQALLDAQRIP*
Ga0126369_118593681	3300012971	Tropical Forest Soil	LADQLIVVFDGAIVQAVMGTMRHSDAARDAVQALLDAQGIP*
Ga0182041_122547921	3300016294	Soil	DQLIVVFDGAIVQAVMGTVRHSDAARDAVQALLDAHGIP
Ga0182033_100945034	3300016319	Soil	AHQAERGQAKDPQRLADQLIVVFDGAIVQAVMGTIAHPDAARSAVQALLDAHGIP
Ga0182033_104181713	3300016319	Soil	GQARDPQRLADQLIVVFDGAIVQAVMGTARHPDAARTAAETLLDAHNVR
Ga0182032_113850222	3300016357	Soil	HAERGQAKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0182032_116676082	3300016357	Soil	AKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARTAAQALLDAHGIP
Ga0182034_110664642	3300016371	Soil	ADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHDIP
Ga0182040_106102322	3300016387	Soil	VPRRRPGVPAWRRLRGYFAGQAERGHADDPQRLADQLVIIFDGAIVQAVMGTGLHADAALTAVLALLDAQHLD
Ga0182037_114300832	3300016404	Soil	LIVVFDGAIVQAVIGTMRHSDAARDAVQALLDAHDIP
Ga0182039_103092823	3300016422	Soil	ARQAERGQAKDPQRLADQLLVVFDGAIVQAVMGTMHHSDAARSAVQALLDAHGIP
Ga0187779_103934631	3300017959	Tropical Peatland	DPQRLADELIVVFDGAIVQAVMGTARHPDAARTAVQALLDAHRVP
Ga0187783_100256907	3300017970	Tropical Peatland	DPQRLADELIVVFDGAIVQAVMGTARHPDAARTAVQALLDAHGVP
Ga0187783_100941462	3300017970	Tropical Peatland	ADELIVVFDGAIVQAVMGTARHPDAARTAVHALLDAHSVP
Ga0187783_102120773	3300017970	Tropical Peatland	QLMAFFDGAIVQAVMGTALDPGAAQAAVTALLDAQHVG
Ga0187781_108748582	3300017972	Tropical Peatland	QAERGQAKDPQRLADELIVVFDGAIVQAVMGTARHPDAARTAAQALLDAHSVP
Ga0126371_100613593	3300021560	Tropical Forest Soil	VVFDGAIVQAVIGTMTHSDAARDAVQALLDAHGIP
Ga0126371_100691271	3300021560	Tropical Forest Soil	LRDYFAGQAEQGHADDPQRLADQLVIIFDGAIVQGVMGTGRRADAALTAASALLDAQHLD
Ga0126371_111624922	3300021560	Tropical Forest Soil	ERGQAKDPQRLADQLIVVFDGAIVQAVMGTMAHSDAARDAVQALLDAHGIP
Ga0126371_135580231	3300021560	Tropical Forest Soil	DQLIVVFDGAIVQAVMGTLRHSDAARSAVQALLDAHGIP
Ga0209701_101599371	3300027862	Vadose Zone Soil	YKLRLRDYFARQAERGSAADPQRLADQLIVIFDGAIVQAVMGTSLHADAARTAVEALLDAQRLTY
Ga0318516_106893341	3300031543	Soil	QLIVVFDGAIVQAVMGTLAHPDAARSAVQVLLDAHGIP
Ga0318534_101084481	3300031544	Soil	YKLRLRDYFARQAERGQAKDPQRLADELIVVFDGTIVQAVMGTTRHHDAARTAVQALLDAHSIL
Ga0318534_103707581	3300031544	Soil	GQADDPQRLADQLIVVFDGAIVQAVIGTTRHSDAARSAVQALLDAHGIP
Ga0318534_104876321	3300031544	Soil	VIIFDGAIVQAVMGTGRRADAARTAASALLDAQHLD
Ga0318538_102452462	3300031546	Soil	YFARHAERGQAKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318538_103641271	3300031546	Soil	LQLRGYFARHAERGQAKDPQRLADQLIVVFDGAIVQAVIGTLRHSDAARTAAQALLDAHGIP
Ga0318538_103887911	3300031546	Soil	LRGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318571_100885512	3300031549	Soil	RDYKLQLRGYFARHAERGQAKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318528_105911721	3300031561	Soil	QAERGQAKDPQRLADQLIVVFDGAIVQAVMGTIAHPDAARSAVQALLDAHGIP
Ga0318573_101369074	3300031564	Soil	PQQLADQLIVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVR
Ga0318515_106119721	3300031572	Soil	AERGQADDPQRLADQLIVVFDGAIVQAVIGTTRHSDAARSAVQALLDAHGIP
Ga0318561_100584793	3300031679	Soil	RLADQLIVVFDGAIVQAVMGTLAHPDAARSAVQVLLDAHGIP
Ga0318560_103362771	3300031682	Soil	RDYFARQAERGQAKDPQRLADELIVVFDGTIVQAVMGTTRHHDAARTAVQALLDAHSIL
Ga0318560_105799452	3300031682	Soil	YFARQAERGQAKDPQRLADQLIVVFDGAIVQAVIGTMRHSDAARDAVQALLDAHDIP
Ga0318496_100279901	3300031713	Soil	AKRGQAKDPQRLADQLIVVFDGAIVQAVMGTLAHPDAARSAVQVLLDAHGIP
Ga0306917_115911361	3300031719	Soil	IARDYKLQVRGYFARHAERGQAKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318493_100848851	3300031723	Soil	QLIVVFDGAMVQAVMGTARHPDAARTAVETLLDAHNVP
Ga0318500_106250921	3300031724	Soil	AGQAERGRAEDPQRLADQLIVVFDGAMVQAVMGTARHPDAARTAVETLLDAHNVP
Ga0318502_100229021	3300031747	Soil	GRAKDPQRLADQLIVVFDGAIVQAVMGTLAHPDAARSAVQVLLDAHGIP
Ga0318492_107346832	3300031748	Soil	RDHKLQLRGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318554_102826371	3300031765	Soil	IVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318554_103989392	3300031765	Soil	YFARQAERGQAKDPQRLADELMVVFDGAIVQAVMGTMRHSDAARSAAQALLDAHGIP
Ga0318554_104474151	3300031765	Soil	IARDYKLRLRGYFARQAERGQARDPQRLADQLIVIFDGAIVQAVIGTVQDPDAARTAAEALLDAQGVR
Ga0318521_102964191	3300031770	Soil	VVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318521_105879682	3300031770	Soil	VFGQAERGQAKDPQRLADQLIVVFDGAIVQAVIGTMRHSDAARDAVQALLDAHDIP
Ga0318546_101019844	3300031771	Soil	GAADPQQLADQLIVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVH
Ga0318546_102962402	3300031771	Soil	RQAERGQAKDPQRLADQLIVVFDGAIVQAVMGTVRHSDAARDAVQALLDAHGIP
Ga0318543_102173431	3300031777	Soil	LIVVFDGAIVQSVMGTLRHSDAARTAAQALLDAHGIP
Ga0318543_104615711	3300031777	Soil	QLADQLIVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVR
Ga0318566_103388281	3300031779	Soil	YFARQAERGQADDPQRLADQLIVVFDGAIVQAVIGTTRHSDAARSAVQALLDAHGIP
Ga0318508_11558631	3300031780	Soil	RGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHDIP
Ga0318547_103580291	3300031781	Soil	IARDYKLQLRGYFARHAERGQAKDPQRLADQLIVVFDGAIVQSVMGTLRHSDAARTAAQALLDAHGIP
Ga0318529_100572661	3300031792	Soil	DPQRLADQLIVVFDGAIVQAVIGTTRHSDAARSAVQALLDAHGIP
Ga0318529_102603182	3300031792	Soil	FARQAERGQAKDPQRLADQLIVVFDGAIVQAVIGTMRHSDAARDAVQALLDAHDIP
Ga0318548_104566312	3300031793	Soil	GGASDPQQLADQLIVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVR
Ga0318576_100691843	3300031796	Soil	RIARGYKLRLRDYFARQAERGQAKDPQRLADELIVVFDGTIVQAVMGTTRHHDAARTAVQALLDAHSIL
Ga0318576_104459331	3300031796	Soil	GQAKDPQRLADQLIVVFDGAIVQAVMGTMHHSDAARSAVQALLDAHGIP
Ga0318523_105735962	3300031798	Soil	GQAKDPQRLADQLMVVFDGAIVQAVMGTMRHSDAARSAVQALLDAHGIP
Ga0318523_106830481	3300031798	Soil	LIVVFDGAIVQAVMGTMHHSDAARSAVQALLDAHGIP
Ga0318565_100659531	3300031799	Soil	VVFDGAIVQSVMGTLRHSDAARTAAQALLDAHGIP
Ga0318497_103459271	3300031805	Soil	AKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318497_104305521	3300031805	Soil	LALRGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318567_102442972	3300031821	Soil	QRLADQLIVVFDGAIVQAVIGTMRHSDAARDAVQALLDAHDIP
Ga0318567_102691851	3300031821	Soil	LIVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVH
Ga0318499_103382792	3300031832	Soil	RLADQLMVVFDGAIVQAVMGTMRHSDAARSAVQALLDAHGIP
Ga0318512_106342871	3300031846	Soil	ADQLIVVFDGAIVQAVIGTTRHSDAARSAVQALLDAHGIP
Ga0306923_120696752	3300031910	Soil	RLADQLVVVFDGAIVQAVMGTGQDADAARSAAAALLDAQGVR
Ga0306921_100457615	3300031912	Soil	QLRGYFAHQAERGQAKDPQRLADQLIVVFDGAIVQAVMGTMAHSDAARSAVQALLDAHGI
Ga0306921_100565906	3300031912	Soil	LADQLIVVFDGAIVQAVMGTLAHPDAARSAVQVLLDAHGIP
Ga0306921_121898341	3300031912	Soil	LRGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHDIP
Ga0310916_113271822	3300031942	Soil	LRGYFARHAERGQAKDPQRLADQLIVVFDGAIVQSVMGTLRHSDAARTAAQALLDAHGIP
Ga0310916_115855821	3300031942	Soil	AKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHDIP
Ga0310910_115342771	3300031946	Soil	KLALRGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0306926_105653391	3300031954	Soil	AERGHANDPQRLADQLIVIFDGAIVQAVIGTTRHSDAARSAVQALLDAHGIP
Ga0306926_113307603	3300031954	Soil	RLADQLVIIFDGAIVQAVMGTGRHADAALTAASALLDAQHLD
Ga0318570_103106781	3300032054	Soil	RGLAEDPQRLADQLIVVFDGAMVQAVMGTARHPDAARTAVEMLLDAHNVP
Ga0318504_100951452	3300032063	Soil	IARDHKLQLRGYFARQAERGQAKDPQRLADELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318514_103083001	3300032066	Soil	PQRLADQLIVVFDGAIVQAVMGTIAHPDAARSAVQALLDAHGIP
Ga0318524_102370581	3300032067	Soil	QAKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0306924_103760583	3300032076	Soil	LRGYFARHAERGQAKDPQRLADQLIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHGIP
Ga0318540_101280891	3300032094	Soil	IVVFDGATVQAVMGTAATPGAGYAAAQALLEAHSVR
Ga0318540_103212011	3300032094	Soil	LQLRGYFARQAERGQAKDPQRLADQLIVVFDGAIVQAVIGTMRHSDAARDAVQALLDAHDIP
Ga0306920_1000428667	3300032261	Soil	ELIVVFDGAIVQAVMGTLRHSDAARSAAQALLDAHDIP
Ga0306920_1010525101	3300032261	Soil	RGQAKDPQRLADQLIVVFDGAIVQSVMGTLRHSDAARTAAQALLDAHGIP
Ga0335069_101017598	3300032893	Soil	KLRLHGYFADQAERGRAQDPQRLADMLLLVFDGAIVQAVMGTAVHRDATRTAVQALLDAQNLT
Ga0310914_110158371	3300033289	Soil	ERGQANDPQRLADQLIVVFDGAIVQAVIGTTRHSDAARSAAQALLDAHGIP
Ga0318519_103518533	3300033290	Soil	AERGHADDPQRLADQLVIIFDGAIVQAVMGTGRHADAALTAAAALLDAQHLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074955

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences