Metagenome / Metatranscriptome Family F075018

Basic Information
Family ID	F075018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	98 residues
Representative Sequence	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Number of Associated Samples	110
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.90 %
% of genes near scaffold ends (potentially truncated)	34.45 %
% of genes from short scaffolds (< 2000 bps)	78.99 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Unclassified (52.101 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (36.975 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.93% β-sheet: 23.77% Coil/Unstructured: 62.30%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13466	STAS_2	23.53
PF01609	DDE_Tnp_1	2.52
PF01740	STAS	2.52
PF14659	Phage_int_SAM_3	0.84
PF11706	zf-CGNR	0.84
PF03861	ANTAR	0.84
PF00441	Acyl-CoA_dh_1	0.84
PF12006	DUF3500	0.84
PF05199	GMC_oxred_C	0.84
PF00140	Sigma70_r1_2	0.84
PF05222	AlaDh_PNT_N	0.84
PF02779	Transket_pyr	0.84
PF00589	Phage_integrase	0.84
PF00069	Pkinase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.36
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	2.52
COG3293	Transposase	Mobilome: prophages, transposons [X]	2.52
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	2.52
COG5421	Transposase	Mobilome: prophages, transposons [X]	2.52
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	2.52
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	2.52
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.84
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.84
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.84
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
All Organisms	root	All Organisms	47.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
cellular organisms	root	All Organisms → cellular organisms	47.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.34 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.50 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.68 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.88 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.88 %
Mycolicibacterium smegmatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis	1.68 %
Actinomadura spongiicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura spongiicola	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005093\|Ga0062594_100165141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300005174\|Ga0066680_10488576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300005179\|Ga0066684_10599476	Not Available	740	Open in IMG/M
3300005335\|Ga0070666_10211861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1365	Open in IMG/M
3300005340\|Ga0070689_102042207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis	524	Open in IMG/M
3300005341\|Ga0070691_10355264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300005434\|Ga0070709_10459373	Not Available	961	Open in IMG/M
3300005435\|Ga0070714_100021173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5317	Open in IMG/M
3300005437\|Ga0070710_11354971	Not Available	531	Open in IMG/M
3300005439\|Ga0070711_101314598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis	627	Open in IMG/M
3300005440\|Ga0070705_101248516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300005444\|Ga0070694_101292959	Not Available	613	Open in IMG/M
3300005467\|Ga0070706_100680324	Not Available	955	Open in IMG/M
3300005539\|Ga0068853_100764664	Not Available	924	Open in IMG/M
3300005547\|Ga0070693_101275686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300005548\|Ga0070665_100390304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400	Open in IMG/M
3300005548\|Ga0070665_100883529	Not Available	907	Open in IMG/M
3300005615\|Ga0070702_100016337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3806	Open in IMG/M
3300006052\|Ga0075029_101320657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300006237\|Ga0097621_100125324	Not Available	2182	Open in IMG/M
3300006796\|Ga0066665_10860040	Not Available	707	Open in IMG/M
3300006797\|Ga0066659_10416683	Not Available	1060	Open in IMG/M
3300006804\|Ga0079221_10195181	Not Available	1104	Open in IMG/M
3300006806\|Ga0079220_10418189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300006852\|Ga0075433_10918809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300006854\|Ga0075425_100017890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7710	Open in IMG/M
3300006854\|Ga0075425_100481675	Not Available	1429	Open in IMG/M
3300006871\|Ga0075434_100095469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2979	Open in IMG/M
3300007788\|Ga0099795_10002126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4565	Open in IMG/M
3300009090\|Ga0099827_10123810	Not Available	2086	Open in IMG/M
3300009098\|Ga0105245_10220430	Not Available	1830	Open in IMG/M
3300009101\|Ga0105247_10333405	Not Available	1062	Open in IMG/M
3300009143\|Ga0099792_10938901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300009174\|Ga0105241_10233376	Not Available	1552	Open in IMG/M
3300009177\|Ga0105248_10184192	Not Available	2353	Open in IMG/M
3300009525\|Ga0116220_10392503	Not Available	620	Open in IMG/M
3300009551\|Ga0105238_10079188	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3276	Open in IMG/M
3300009700\|Ga0116217_10209932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1277	Open in IMG/M
3300010154\|Ga0127503_10255700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300010371\|Ga0134125_11817213	Not Available	663	Open in IMG/M
3300010373\|Ga0134128_10681059	Not Available	1142	Open in IMG/M
3300010379\|Ga0136449_102354559	Not Available	770	Open in IMG/M
3300012199\|Ga0137383_10117153	Not Available	1941	Open in IMG/M
3300012200\|Ga0137382_10679423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300012203\|Ga0137399_10210862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1580	Open in IMG/M
3300012207\|Ga0137381_10519329	Not Available	1039	Open in IMG/M
3300012208\|Ga0137376_10633948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300012356\|Ga0137371_10579262	Not Available	863	Open in IMG/M
3300012469\|Ga0150984_107280575	Not Available	752	Open in IMG/M
3300012502\|Ga0157347_1068734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300012507\|Ga0157342_1086941	Not Available	500	Open in IMG/M
3300012683\|Ga0137398_10031407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura spongiicola	3009	Open in IMG/M
3300012915\|Ga0157302_10320416	Not Available	610	Open in IMG/M
3300012924\|Ga0137413_10546516	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	859	Open in IMG/M
3300012925\|Ga0137419_10266518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300012944\|Ga0137410_11283312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300012944\|Ga0137410_11659200	Not Available	561	Open in IMG/M
3300012989\|Ga0164305_10811092	Not Available	777	Open in IMG/M
3300013104\|Ga0157370_10053039	Not Available	3869	Open in IMG/M
3300013105\|Ga0157369_10016883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8203	Open in IMG/M
3300014745\|Ga0157377_10363667	Not Available	975	Open in IMG/M
3300014968\|Ga0157379_11633155	Not Available	630	Open in IMG/M
3300015242\|Ga0137412_10137443	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1975	Open in IMG/M
3300015245\|Ga0137409_10285797	Not Available	1454	Open in IMG/M
3300015372\|Ga0132256_100319191	Not Available	1641	Open in IMG/M
3300015374\|Ga0132255_104850656	Not Available	570	Open in IMG/M
3300018482\|Ga0066669_10176401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1606	Open in IMG/M
3300020070\|Ga0206356_11634639	Not Available	1249	Open in IMG/M
3300020140\|Ga0179590_1070945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300020199\|Ga0179592_10268607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300020579\|Ga0210407_10062670	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2786	Open in IMG/M
3300020579\|Ga0210407_10762920	Not Available	748	Open in IMG/M
3300020579\|Ga0210407_10883204	Not Available	686	Open in IMG/M
3300021088\|Ga0210404_10021927	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2761	Open in IMG/M
3300021171\|Ga0210405_10060703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2984	Open in IMG/M
3300021178\|Ga0210408_10003859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13614	Open in IMG/M
3300021180\|Ga0210396_11223766	Not Available	628	Open in IMG/M
3300021286\|Ga0179583_1066962	Not Available	654	Open in IMG/M
3300021401\|Ga0210393_10173340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1739	Open in IMG/M
3300021403\|Ga0210397_10066174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2356	Open in IMG/M
3300021420\|Ga0210394_10737001	Not Available	863	Open in IMG/M
3300021432\|Ga0210384_10171522	Not Available	1949	Open in IMG/M
3300021478\|Ga0210402_10081582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2877	Open in IMG/M
3300021478\|Ga0210402_10329413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1415	Open in IMG/M
3300022467\|Ga0224712_10277322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300022532\|Ga0242655_10111964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300022726\|Ga0242654_10214671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300024249\|Ga0247676_1075132	Not Available	559	Open in IMG/M
3300024347\|Ga0179591_1133518	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2128	Open in IMG/M
3300025900\|Ga0207710_10480936	Not Available	643	Open in IMG/M
3300025905\|Ga0207685_10064858	Not Available	1460	Open in IMG/M
3300025911\|Ga0207654_10479763	Not Available	876	Open in IMG/M
3300025914\|Ga0207671_10758325	Not Available	771	Open in IMG/M
3300025916\|Ga0207663_10207876	Not Available	1416	Open in IMG/M
3300025918\|Ga0207662_10291782	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300025920\|Ga0207649_10377407	Not Available	1056	Open in IMG/M
3300025921\|Ga0207652_10463956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141	Open in IMG/M
3300025929\|Ga0207664_10119766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2201	Open in IMG/M
3300026041\|Ga0207639_10369183	Not Available	1286	Open in IMG/M
3300026089\|Ga0207648_11066395	Not Available	757	Open in IMG/M
3300026498\|Ga0257156_1035789	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1010	Open in IMG/M
3300026557\|Ga0179587_10032879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2894	Open in IMG/M
3300027765\|Ga0209073_10083131	Not Available	1106	Open in IMG/M
3300029636\|Ga0222749_10055512	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1761	Open in IMG/M
3300030494\|Ga0310037_10030790	Not Available	2583	Open in IMG/M
3300031122\|Ga0170822_16071084	Not Available	744	Open in IMG/M
3300031231\|Ga0170824_125980359	Not Available	925	Open in IMG/M
3300031421\|Ga0308194_10139691	Not Available	737	Open in IMG/M
3300031446\|Ga0170820_13271616	Not Available	599	Open in IMG/M
3300031708\|Ga0310686_101492387	Not Available	619	Open in IMG/M
3300031708\|Ga0310686_101717483	Not Available	570	Open in IMG/M
3300031708\|Ga0310686_107480541	All Organisms → cellular organisms → Bacteria	7279	Open in IMG/M
3300031720\|Ga0307469_10729684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300032160\|Ga0311301_10160169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4024	Open in IMG/M
3300032180\|Ga0307471_102116213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300032515\|Ga0348332_13071087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300032515\|Ga0348332_13109253	Not Available	750	Open in IMG/M
3300034820\|Ga0373959_0031580	Not Available	1073	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.79%
Host-Associated	Host-Associated	25.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.11%
Plants	Host-Associated → Plants	25.21%
Aquatic	Environmental → Aquatic	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.68%
Roots	Host-Associated → Plants → Roots	1.68%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Sediment	Environmental → Aquatic → Sediment	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.98%
Loam	Environmental → Terrestrial → Soil → Loam	13.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062594_1001651413	3300005093	Soil	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0066680_104885761	3300005174	Soil	VTTEFSATGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFAARDDSELYGLLDRIQDLGLHPISLCEIGGTEAVPHLPLRRVLPIRGLPLRRPRDPI
Ga0066684_105994761	3300005179	Soil	TGHRYQLIVRGECGPLTEWLFGDAAIEPGHGCTSLIFSARDDSELYGLLDRIQDLGLHLIILYEVGGTEAVPHLPSRASLAHPGASPLDGRGTP*
Ga0070666_102118611	3300005335	Switchgrass Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDRGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0070689_1020422071	3300005340	Switchgrass Rhizosphere	TDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0070691_103552642	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0070709_104593732	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTTEFSETGHRYQLIVHGGCGPVTERLPGDAAIGTGDGGTGLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0070714_1000211734	3300005435	Agricultural Soil	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRLQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0070710_113549712	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTTEFSETGHRYQLIVHGGCGPVTERLPGDAAIGTGDGGTGLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPL
Ga0070711_1013145981	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGVCGPLTEWLSGDAAIGTGDGGTSLIVSARDDSELYGLLDRIQDLGFHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0070705_1012485162	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTTESSETGHRYRLIVRGECGPLTDWLFGDAAIEPGNGCTSLNFSARDDSDLYGLLDRIQDLGLHLISLNEVGGTEAVPHLPLRASLAHPGASPLYDRGTP*
Ga0070694_1012929591	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLPGDAAIGTGDGCTRLNFAARDDSELCGLLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0070706_1006803242	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSTGFSETGHRYQLIVRGECGPLTERLSGDAAIETGNGCTSLIFTARDDSELYGLLDRIQDLGLHLITLYEVGGTEAVPHLPLRASLAHPGASP*
Ga0068853_1007646642	3300005539	Corn Rhizosphere	GHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0070693_1012756862	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPR
Ga0070665_1003903043	3300005548	Switchgrass Rhizosphere	VTTDVSETGHRYQLIVRGGCGPVTERLPGDAAIGTGDGGTSLIVSARDDSELYGLPDRIQDLGLHLISLNEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0070665_1008835292	3300005548	Switchgrass Rhizosphere	GGCGPVTERLPGDAAIGTGDGGTGLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0070702_1000163374	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGPLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0075029_1013206571	3300006052	Watersheds	FSETAHRYQLILRGECGPLTEWLFGDAAIETGNGCTSLTFSARDDSELFGLLDRIQDLALHLISLYEIGGTEAVPHPPLRASLAHPGASPLYGRGTPYSPPWGPAVLSRAARPSGPKR*
Ga0097621_1001253244	3300006237	Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAAIGTRDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0066665_108600401	3300006796	Soil	LTTEFSETGHRYQLIVRGECGPLTEWLFGDAAIEPGQGCTSLIFSARDDSELYGLLDRIQDLGLHLIILYEVGGTEAVPHLPSRAGLAHPGASP*
Ga0066659_104166832	3300006797	Soil	VTTEFSEIGHRYQLMVRGECGPLTESLFGDAAIETGHGCTSLIFSARDDSELYGLLDRIQDLGLHLITLDEVGGTDAVPHLPLRAGLAHPGASPLDDRGTP*
Ga0079221_101951812	3300006804	Agricultural Soil	VTTEFSETGHRYQLMVRCGCGSVTERLPGDAAIGTGDGGTSLIVSARDDSELYGPLDRIQDLGLHLVTLDEAGGTEAVPRLPLRSCPSGLPP*
Ga0079220_104181891	3300006806	Agricultural Soil	MTTDVSETGHRYQLMVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPVLPP*
Ga0075433_109188092	3300006852	Populus Rhizosphere	MTTDVSETGHRYQRMVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0075425_1000178907	3300006854	Populus Rhizosphere	MTTDVSETGHRYQLMVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0075425_1004816752	3300006854	Populus Rhizosphere	VTTEFSETGHRYQLIVRGECGPLTERLSGDAAIGTGDGGTSLIFSARDDGELCGLLDRIQDLGLHLISLNEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0075434_1000954695	3300006871	Populus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0099795_100021262	3300007788	Vadose Zone Soil	LTTEFSETGHRYQLIVRGEGGPLTESLFGDDATETGHGCTSLVFPARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASP*
Ga0099827_101238102	3300009090	Vadose Zone Soil	VTTEFSETGHRYQLILRGECGPLTEWLFGDAAIETSNGCTGLIFSARDDSDLYDLLDRIQDLGLHLISLYEIGGTEAVPHLPLRASLAHPGLHPYTAAGPHTPPWGPAVLPRAAPAVVPKR*
Ga0105245_102204303	3300009098	Miscanthus Rhizosphere	VTTEFSETGHRYQLIVRGGCGPVTERLPGDAAIGTGDGGTSLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0105247_103334052	3300009101	Switchgrass Rhizosphere	MSTGFSETGHRYQLIVRGECGPLTERLSGDAAIETGNGCTSLIFTARDDSELYGLLDRIQDLGLHLITLYEVGGTEAVPHLSLRASLAHPGASPLRPRDPIPPWDPAVLPRAAPAVGAQRSG*
Ga0099792_109389012	3300009143	Vadose Zone Soil	MPVTTGFSEPGSRYQLILRGECGPLTAWLFGDAAIESGGGCTSVIFSARDDSELYGLLDRIQDLGLHLISLYQVGGTEAVPHLPLRASLAHPGASPLYGRGTP
Ga0105241_102333763	3300009174	Corn Rhizosphere	VTTEFSETGHRYQLIVRGECGPPTERLPGDAAIGTGDGGTGLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0105248_101841923	3300009177	Switchgrass Rhizosphere	VTTEFSETGHRYQLIVRGGCGPVTERLPGDAAIGTGDGGTSLIVSARDDSELYGLSDRIQDLGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0116220_103925032	3300009525	Peatlands Soil	MTTAEFSETGHRYQLILRGECGPLTGWLFGDAAIETGNGCTSLAFSARDDSELYGLLDRVQDLALHLISLYEIGGTEAVPHPPVRASLAHPGASPLYGRGTPYPP
Ga0105238_100791885	3300009551	Corn Rhizosphere	MVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0116217_102099323	3300009700	Peatlands Soil	MTTEFSETGHRYQLILRGECGPLTEWLFGDAAIETGNGRTSLTFSARDDSELYGLLDRIQDLALHLISLYEIGGTETVPHPPVPASLAHPGASPLY
Ga0127503_102557001	3300010154	Soil	MTTEVSETGHRYQLIVRGECGPLTEWLFGDAAIEPGDGCASLIFSARDDSDLYGLLDRIQDLGLHLISLNEVGGTEAVPHLRLPVSLAHPGLSPLDDRGTP*
Ga0134125_118172132	3300010371	Terrestrial Soil	VTTEFRETGHRYQLIVRGGCGPLTERRPGDAAIGTGDGGASLIVSARDDSDLYGPLDRIQDLGLHLVTLDEAGGTEAVPRLPLRAGPAIRASPLDDRGTP
Ga0134128_106810591	3300010373	Terrestrial Soil	MPVTTGFSEPGYRYQLILRGECGPLTAWLFGDAAIDSGGGGTSVIFSARDDSELYGLLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPG
Ga0136449_1023545591	3300010379	Peatlands Soil	MTTAEFSETGHRYQLILRGECGPLTGWLFGDAAIETGNGCTSLTFSARDDSELYGLLDRIQELALHLISLYEIGGTEALPHPPVRASLAHPGASPLYGRGTPYPPVGSRGLAARRPRPSCPKR*
Ga0134127_121793562	3300010399	Terrestrial Soil	VTTEFSETGHRYQLIVRGECGPLTEWLFGDAAIGTGDGCTSLIFPAWDSELYGLSDRIQDLGLHLISLNEADGTEAVPRL
Ga0137383_101171532	3300012199	Vadose Zone Soil	LTTEFSETGHRYQLIVRGECGPLTEPLFDDAAIEPGHGCTSLIFPARDDSELYGLLDRIQDLGLHLIILYEVGGTEAVPHLPSRASLAHPGASPLDGRGTP*
Ga0137382_106794232	3300012200	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASPLYGRGTPYPPWGPAVLPR
Ga0137399_102108622	3300012203	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASPLYGRGTP*
Ga0137381_105193291	3300012207	Vadose Zone Soil	LTTEFSETGHRYQLIVRGECGPLTEWLFGDAAIEPGHGCTSLIFPARDDSELYGLLDRIQDLGLHLIILYEVGGTEAVPHLPSRASLAHPGASPLDGRGTP*
Ga0137376_106339482	3300012208	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFAARDDSELYGLLDRIQDLGLHPISLCEIGGTEAVPHLPLRRVLPIRGLPLSLDSRSGN*
Ga0137371_105792621	3300012356	Vadose Zone Soil	LTTEFSETGHRYQLIVRGECGPLTEWLFGDAAIEPGHGCTSLIFSARDDSELYGLLDRIQDLGLHLIILYEVGGTEAVPHLPSRAGLATPGASP
Ga0150984_1072805751	3300012469	Avena Fatua Rhizosphere	VTTDVSQTGHRYQLLVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGLLDRIQHLGLHLVTLDEIGGTEAVPHLPLRAGLAHPGASP
Ga0157347_10687341	3300012502	Arabidopsis Rhizosphere	VTTDVSETGYRYQLLVRGECGPLTEWLFGDAAIGTRDGGTSLIVSARDDSELYGLLDRIQDLGLHLISLDEAGGTEAVPHLPLRAVLAPSGASPLDDRGTP*
Ga0157342_10869411	3300012507	Arabidopsis Rhizosphere	VTTAFSETGHRYQLIVRCGCGPLTERLPGDAAIVTGDGGTSLIVPARDDSELYGVLDRIQDLGLHLISLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0137398_100314074	3300012683	Vadose Zone Soil	VTTEFSETGHRYQLIVRGEGGPLTESLFGDAATETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASP*
Ga0157302_103204161	3300012915	Soil	VTTEFSETGHRYQLMVRGACGPLTEWLFGDAAIGTGDGGTSLIVSVRDDGELYGVLDRIQDLGFHLVTLDEAGGTEAVPRLPLRRVLSSGLPP*
Ga0137413_105465161	3300012924	Vadose Zone Soil	GHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGAEAVPHLPLRASLAHPGASPLYGRGTP*
Ga0137419_102665182	3300012925	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASP*
Ga0137410_112833121	3300012944	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASPLRRPRDPITPPWGPAALLPAALAVVPET*
Ga0137410_116592001	3300012944	Vadose Zone Soil	VTTEFSETGHRYQLMVRGECGPLTESLFGDAAIESGDGCTSLIVSARDDSELCGLLDRIQDLGLDLITLDEVGGTEAVPYLPLRASLPIRASPSDGRGTP*
Ga0164305_108110922	3300012989	Soil	VTTDGSETGHRYQLIVRGGCGPLTGRLSGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0157370_100530394	3300013104	Corn Rhizosphere	VTTEFSETGHRYQLIVRCGCGPVTERLPGDAAIGTGDGGTGLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP*
Ga0157369_100168839	3300013105	Corn Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPRLPLRRVLSSGLPP*
Ga0157377_103636671	3300014745	Miscanthus Rhizosphere	RYQLMVRGECGPLTEWLFGDAAIGTGDGCTSLIVAARDDSDLYGVPDRIHDRGLLLVTLVEAGGTAAVPHLPLRAGLAHPGLPP*
Ga0157379_116331551	3300014968	Switchgrass Rhizosphere	VTTEFSETGHRYQLIVHGGCGPVTERLPGGAAIGTGGGCTSLIVSARDDSELYGLSDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP*
Ga0137412_101374433	3300015242	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGAEAVPHLPLRASLAHPGASPLYGRGTP*
Ga0137409_102857972	3300015245	Vadose Zone Soil	MVRGECGPLTESLFGDAAIESGDGCTSLIVSARDDSELCGLLDRIQDLGLDLITLDEVGGTEAVPYLPLRASLPIRASPSDGRGTP*
Ga0132256_1003191911	3300015372	Arabidopsis Rhizosphere	VTTEFSETGHRYQLIVRGECGPLTERLSGDAAIGTGDGGTNLIVSARDDSELYGVPDRIQDLGLHLISLDEAGGTEAVPRLPLRAGLAHPG
Ga0132255_1048506562	3300015374	Arabidopsis Rhizosphere	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRIQGLGLHLISLNEAGGTEAIPHFSLRASLAHPGLPP*
Ga0066669_101764012	3300018482	Grasslands Soil	LTTEFSETGHRYQLIVRGECGPLTEPLFDDAAIEPGHGCTSLIFPARDDSELYGLLDRIQDLGLHLIILYEVGGTEAVPHLPSRASLAHPGASPLDGRGTP
Ga0206356_116346392	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDRGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Ga0179590_10709452	3300020140	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASP
Ga0179592_102686071	3300020199	Vadose Zone Soil	VRGEGGPLTESLFGDAATETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGAEAVPHLPLRASLAHPGASPLYGRGTP
Ga0210407_100626702	3300020579	Soil	MTAEFSETGHRYQLIVRGECGPLTRWLFGDAAIETSHGCTRLILSARDDSDLYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASPLYGRGTPYPPWDPAVLPRAAPAVGA
Ga0210407_107629201	3300020579	Soil	CGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRLQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0210407_108832042	3300020579	Soil	MTTELSETGHRYQLIVRGECWPLTEWLVGGAAIGTGDGCTTLIVSARDDSELCGLLDRIQDLGLHLISLHKIGGTQAVPRLPLR
Ga0210404_100219274	3300021088	Soil	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRIQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0210405_100607036	3300021171	Soil	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELCGLLDRIQDLGLHLISLHEIGGTQAVPRLPLRAGLAHPGASP
Ga0210408_100038599	3300021178	Soil	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRLQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0210396_112237662	3300021180	Soil	MPVTTEFSETGHRYQVIVGGECGPLTAWLFGDAAIQTGHGRTSLTFSDLDDSDLYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGTSPLYGRGTPFPPVGS
Ga0179583_10669621	3300021286	Vadose Zone Soil	MPVTTEFSETGHRYQLIVRGEGGPLTESLFGDAAIETGHGCTSLVFSARDDRELYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPGASP
Ga0210393_101733405	3300021401	Soil	RYQLIVRGECGPLTEWLVGGAAIGTGDGCTTLIVSARDDSELCGLLDRIQDLGLHLISLHEVGGTQAVPRLPLRAGLAHPGASP
Ga0210397_100661741	3300021403	Soil	VTTEVSETGHRYQLIARGECGHLTERLSGDAAIGTSDGCTSLIVSARNDSELYGLLDRIQVLGLHLISLNEADGTEAVPHLPLRASLAHPGLPP
Ga0210394_107370011	3300021420	Soil	MPVTTELSDTGSRHQVIVRGECGPLTEWLFGDAAIETGHGCTSLIFSARDDSELYGLLDRIQDLGLHLITLYEIGGAEAVPRLPLRAGLAHPGASPLYGRGTP
Ga0210384_101715223	3300021432	Soil	MPVTTELSDTGSRHKVIVRGECGPLTEWLFGDAAIETGHGCTSLIFSARDDSELYGLLDRIQDLGLHLITLYEIGGAEAVPRLPLRAGLAHPGASPLYGRGTP
Ga0210402_100815821	3300021478	Soil	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRIQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLRRPRDPITPLWGPAVSPPAAPAVVPETLKQHVPSGC
Ga0210402_103294133	3300021478	Soil	VTTEFSETGHRYQVIVRGECGPLTRWLFGDAAIETGHGRTSLTFSARDDSDLYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLA
Ga0224712_102773221	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTESSETGHRYRLIVRGECGPLTDWLFGDAAIEPGNGCTSLNFSARDDSDLYGLLDRIQDLGLHLISLNEVGGTEAVPHLPLRASLAHPGASPLYDRGTP
Ga0242655_101119641	3300022532	Soil	TEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRIQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0242654_102146711	3300022726	Soil	MTAEFSETGHRYQLIVRGECGPLTRWLFGDAAIETGHGCTRLIFSARDDSDLYGLLDRIQDLGLHLISLCEIGGTEAVPHLPLRASLAHPEA
Ga0247676_10751321	3300024249	Soil	VTTDVSETGYRYQLLVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Ga0179591_11335182	3300024347	Vadose Zone Soil	MPVTTEFSDTGHRYQLIVRGEGGPLTESLFGDAATETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLYEIGGAEAIPHLPLRASLAHPGASPLYGPRDPITPPWGPAVLPRAAPAVGA
Ga0207710_104809361	3300025900	Switchgrass Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAIRASPLDDRGTP
Ga0207685_100648582	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VTTEFSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Ga0207654_104797631	3300025911	Corn Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0207671_107583251	3300025914	Corn Rhizosphere	LPVTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDRGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Ga0207663_102078763	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIFSARDDSELYGLPDRIQDRGLHLVTLDEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0207662_102917822	3300025918	Switchgrass Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGEGGTSLIVSARDDSELYGQPDRIQDLGLHLISLNEVGGTEAVPHLPLRASLAHPGASPLYDRGTP
Ga0207649_103774073	3300025920	Corn Rhizosphere	RYQLMVRGECGPLTEWLFGDAGDGGTSLIVSVRDDGELYGVLDRIQDLGFHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Ga0207652_104639564	3300025921	Corn Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSGLYGVLDRIQDPGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLP
Ga0207664_101197663	3300025929	Agricultural Soil	LPVTTEFSETGHRYQLIVRGECGPLTERLPGDAAIGTGDGCTSLIVSARDDSELYGLLDRLQDLGLHLVTLGEAGGTEAVPRLPLRAGLAIRASPLDDRGTP
Ga0207639_103691833	3300026041	Corn Rhizosphere	ETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP
Ga0207648_110663952	3300026089	Miscanthus Rhizosphere	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAGDGGTSLIVSARDDSDLYGVLDRIQDLGLHLVTLDEAGGTEAVPHLPLRAGLAH
Ga0257156_10357892	3300026498	Soil	MPVTTEFSDTGHRYQLIVRGEGGPLTESLFGDAATETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLNEIGGTEAVPHLPLRASLAHPGASPLYGRGTP
Ga0179587_100328794	3300026557	Vadose Zone Soil	MPVTTEFSDTGHRYQLIVRGEGGPLTESLFGDAATETGHGCTSLVFSARDDSELYGLLDRIQDLGLHLISLCEIGGAEAVPHLPLRASLAHPGASPLYGRGTP
Ga0209073_100831312	3300027765	Agricultural Soil	VTTEFSETGHRYQLIVRGECGPLTERLSGDAAIGTGGGCTSLIVSARDDSELYGLLDRIQGLGLHLISLNEAGGTEAIPHFSLRASLAHPGLPP
Ga0222749_100555123	3300029636	Soil	DTGSRHQVIVRGECGPLTEWLFGDAAIETGHGCTSLIFSARDDSELYGLLDRIQDLGLHLITLYEIGGAEAVPRLPLRAGLAHPGASPLYGRGTPYPPGGVPRSCH
Ga0310037_100307903	3300030494	Peatlands Soil	MTTEFSETGHRYQLILRGECGPLTEWLFGDAAIETGNGRTSLTFSARDDSELYGLLDRIQDLALHLISLYEIGGTEVVPHPPVRASLAHPGASPLYGRGTPYPPVGSRGLAACRPRPSCPKR
Ga0170822_160710841	3300031122	Forest Soil	MTAEFSETGRRYQLIVRGECGPLTEWLVGDAAIETGHGRTSLIFSARDDSELYGLLDRIQDLGLHLIMLYQVGGIEAVPHLPLRASLAYPGASPL
Ga0170824_1259803592	3300031231	Forest Soil	MTAEFSETGRRYQLIVRGECGPLTEWLVGDAAIETGHGCTSLIFSARDDSELYGLLDRIQDLGLHLIMLYQVGGIEAVPHLPLRASLAYPGASPLYGRGTPYPPVGSRGLATSRL
Ga0308194_101396912	3300031421	Soil	VTTDVSQTGHRYQLIVRGACGPLTEWLFGDAAIGTGDGCTSLIVSARDDGELYGLLDRIQDLGLHLVTLDEAGGTEAVPHFPLRAGLAIR
Ga0170820_132716161	3300031446	Forest Soil	LTASLLGDAAIESGGGCTSVAFSARDDSELYGLLDRIQDLGLHLIMLYQVGGIEAVPHLPVRASLAYPGASPLYGRGAPYPPVGSRGLATSRL
Ga0310686_1014923871	3300031708	Soil	VTTEFSETGHRYQLILRGECGPLTGWLFGDVTIETGNGCTSLTFSARDDSELYGPLDRIQDLALHLISLYEIGGTEAVPHLPVRASLAHRGLPPYTAAGPHTPPWGPAVLPRAARPSCPKTLKHPAASPSCTDLSDLRL
Ga0310686_1017174831	3300031708	Soil	VTTEFSETGHRYQLLLRGECGPLTEWLFGDAAIETGNGCTSLIFSARDDSELYGLLDQIQDLGLHLTSLYEIGGTEAVPHLPLRASLAHPGVPPYTTAGPHTPPWGPAVLPRAAG
Ga0310686_1074805415	3300031708	Soil	VTAQLSETGHRYQLIVRGECGLLTEGLFGDAAIESGHGCTGLIFSARDDSDLYGLLDRIQDLGLHLISLYQIGGTEAVPHLPLRASLARPGASPLYGRGIPYPPVGSRGLATRRPAVVPGTLKRPAASPSR
Ga0307469_107296842	3300031720	Hardwood Forest Soil	VTTEFSETGHRYQLIVRGECGPLTERLSGDAAIGTGDGFTSLIFSARDDSELYGLLDRIQDLGLHLISLNEAGGTEAVPHLPLRAGLAHPGLPLRRPRDPIPPVGSCGLADRCP
Ga0311301_101601693	3300032160	Peatlands Soil	MTTAEFSETGHRYQLILRGECGPLTGWLFGDAAIETGNGCTSLTFSARDDSELYGLLDRIQELALHLISLYEIGGTEALPHPPVRASLAHPGASPLYGRGTPYPPVGSRGLAARRPRPSCPKR
Ga0307471_1021162132	3300032180	Hardwood Forest Soil	VTTEFSETGHRYQLIVRGECGPLTERLSGDAAIGTGDGFTSLIFSARDDSELYGLLDRIQDLGLHLISLNEAGGTEAVPHLP
Ga0348332_130710871	3300032515	Plant Litter	VTAQLSETGHRYQLIVRGECGLLTEGLFGDAAIESGHGCTGLIFSARDDSDLYGLLDRIQDLGLHLISLYQIGGTEAVPHLP
Ga0348332_131092532	3300032515	Plant Litter	VTTEFSETGHRYQLILRGEGGPLEEGLFGDAAIESGNGCTSLNFSARDDSELYRLLDRIPDLVLHLISLYEIGGTEAVPHLPVRPSRAHPGAS
Ga0373959_0031580_565_849	3300034820	Rhizosphere Soil	VTTDVSETGHRYQLMVRGECGPLTEWLFGDAAIGTGDGGTSLIVSARDDSDLYGVLDRIQDRGLHLVTLDEAGGTEAVPHLPLRAGLAHPGLPP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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