Metagenome Family F075048

Basic Information
Family ID	F075048
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	69 residues
Representative Sequence	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIETFRL
Number of Associated Samples	99
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	3.51 %
% of genes near scaffold ends (potentially truncated)	91.60 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Archaea (81.513 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.807 % of family members)
Environment Ontology (ENVO)	Unclassified (21.849 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.261 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.68% β-sheet: 14.49% Coil/Unstructured: 47.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01243	Putative_PNPOx	6.72
PF00296	Bac_luciferase	5.04
PF16655	PhoD_N	3.36
PF00106	adh_short	2.52
PF01436	NHL	2.52
PF09423	PhoD	2.52
PF00072	Response_reg	0.84
PF07452	CHRD	0.84
PF05368	NmrA	0.84
PF13432	TPR_16	0.84
PF13462	Thioredoxin_4	0.84
PF00353	HemolysinCabind	0.84
PF00903	Glyoxalase	0.84
PF07143	CrtC	0.84
PF07237	DUF1428	0.84
PF03372	Exo_endo_phos	0.84
PF00150	Cellulase	0.84
PF13414	TPR_11	0.84
PF07995	GSDH	0.84
PF05990	DUF900	0.84
PF13371	TPR_9	0.84
PF13531	SBP_bac_11	0.84
PF13167	GTP-bdg_N	0.84
PF05154	TM2	0.84
PF01545	Cation_efflux	0.84
PF00565	SNase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	5.04
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.84
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.84
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.84
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	0.84
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.84
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.84
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.84
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.84
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	81.51 %
Unclassified	root	N/A	17.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	4.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	4.20 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	4.20 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	4.20 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1.68 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.84 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.84 %
unclassified Nitrososphaera	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Nitrososphaera sp. AFS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	0.84 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.84 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918002\|contig03944	All Organisms → cellular organisms → Archaea	1031	Open in IMG/M
2140918002\|contig06828	All Organisms → cellular organisms → Archaea	1038	Open in IMG/M
2228664021\|ICCgaii200_c0703521	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300000890\|JGI11643J12802_10944718	All Organisms → cellular organisms → Archaea	959	Open in IMG/M
3300001431\|F14TB_101497072	All Organisms → cellular organisms → Archaea	1375	Open in IMG/M
3300002090\|JGI24806J26614_1025356	All Organisms → cellular organisms → Archaea	575	Open in IMG/M
3300002099\|JGI24808J26613_1011558	All Organisms → cellular organisms → Archaea	1696	Open in IMG/M
3300002100\|JGI24809J26612_1033858	All Organisms → cellular organisms → Archaea	818	Open in IMG/M
3300003911\|JGI25405J52794_10078738	All Organisms → cellular organisms → Archaea	724	Open in IMG/M
3300003996\|Ga0055467_10176249	Not Available	650	Open in IMG/M
3300004156\|Ga0062589_102507102	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300005186\|Ga0066676_10029403	All Organisms → cellular organisms → Archaea	2966	Open in IMG/M
3300005269\|Ga0065706_1003574	All Organisms → cellular organisms → Archaea	645	Open in IMG/M
3300005293\|Ga0065715_10362383	All Organisms → cellular organisms → Archaea	903	Open in IMG/M
3300005294\|Ga0065705_10022773	All Organisms → cellular organisms → Archaea	2152	Open in IMG/M
3300005345\|Ga0070692_10652034	All Organisms → cellular organisms → Archaea	703	Open in IMG/M
3300005347\|Ga0070668_101752653	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300005536\|Ga0070697_100546876	All Organisms → cellular organisms → Archaea	1015	Open in IMG/M
3300005617\|Ga0068859_102059774	All Organisms → cellular organisms → Archaea	630	Open in IMG/M
3300005937\|Ga0081455_10064450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3068	Open in IMG/M
3300006049\|Ga0075417_10550109	All Organisms → cellular organisms → Archaea	584	Open in IMG/M
3300006196\|Ga0075422_10621666	All Organisms → cellular organisms → Archaea	502	Open in IMG/M
3300006844\|Ga0075428_102422899	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300006845\|Ga0075421_101630130	All Organisms → cellular organisms → Archaea	700	Open in IMG/M
3300006852\|Ga0075433_10180430	All Organisms → cellular organisms → Archaea	1879	Open in IMG/M
3300006852\|Ga0075433_11751068	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300006854\|Ga0075425_100016403	All Organisms → cellular organisms → Archaea	8026	Open in IMG/M
3300006903\|Ga0075426_10535567	All Organisms → cellular organisms → Archaea	871	Open in IMG/M
3300006904\|Ga0075424_102876099	All Organisms → cellular organisms → Archaea	500	Open in IMG/M
3300009100\|Ga0075418_11102667	All Organisms → cellular organisms → Archaea	860	Open in IMG/M
3300009156\|Ga0111538_13148319	All Organisms → cellular organisms → Archaea	575	Open in IMG/M
3300009162\|Ga0075423_12557460	All Organisms → cellular organisms → Archaea	558	Open in IMG/M
3300009810\|Ga0105088_1045522	All Organisms → cellular organisms → Archaea	734	Open in IMG/M
3300009819\|Ga0105087_1053719	All Organisms → cellular organisms → Archaea	666	Open in IMG/M
3300010036\|Ga0126305_10008536	All Organisms → cellular organisms → Archaea	5061	Open in IMG/M
3300010039\|Ga0126309_10946245	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
3300010333\|Ga0134080_10448672	All Organisms → cellular organisms → Archaea	604	Open in IMG/M
3300010373\|Ga0134128_12682875	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300010375\|Ga0105239_10595372	Not Available	1261	Open in IMG/M
3300010375\|Ga0105239_10947003	All Organisms → cellular organisms → Archaea	989	Open in IMG/M
3300012482\|Ga0157318_1022296	Not Available	572	Open in IMG/M
3300012488\|Ga0157343_1011983	All Organisms → cellular organisms → Archaea	680	Open in IMG/M
3300012506\|Ga0157324_1010071	All Organisms → cellular organisms → Archaea	793	Open in IMG/M
3300012519\|Ga0157352_1087057	All Organisms → cellular organisms → Archaea	533	Open in IMG/M
3300012937\|Ga0162653_100030139	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	778	Open in IMG/M
3300012948\|Ga0126375_11565033	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300012958\|Ga0164299_10002906	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	5355	Open in IMG/M
3300012958\|Ga0164299_10007729	All Organisms → cellular organisms → Archaea	3807	Open in IMG/M
3300012960\|Ga0164301_11497273	Not Available	556	Open in IMG/M
3300012961\|Ga0164302_10003635	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	5346	Open in IMG/M
3300012986\|Ga0164304_10183047	Not Available	1352	Open in IMG/M
3300013306\|Ga0163162_10008142	All Organisms → cellular organisms → Archaea	10231	Open in IMG/M
3300013306\|Ga0163162_10106595	All Organisms → cellular organisms → Archaea	2898	Open in IMG/M
3300013307\|Ga0157372_10632605	All Organisms → cellular organisms → Archaea	1246	Open in IMG/M
3300013307\|Ga0157372_12051521	All Organisms → cellular organisms → Archaea	657	Open in IMG/M
3300013308\|Ga0157375_10220539	Not Available	2055	Open in IMG/M
3300014968\|Ga0157379_11123035	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300015371\|Ga0132258_11935042	All Organisms → cellular organisms → Archaea	1484	Open in IMG/M
3300015371\|Ga0132258_12970668	Not Available	1176	Open in IMG/M
3300015371\|Ga0132258_13570001	All Organisms → cellular organisms → Archaea	1064	Open in IMG/M
3300015372\|Ga0132256_100920974	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	990	Open in IMG/M
3300015372\|Ga0132256_101840204	Not Available	713	Open in IMG/M
3300015373\|Ga0132257_100036429	All Organisms → cellular organisms → Archaea	5389	Open in IMG/M
3300015373\|Ga0132257_101691324	All Organisms → cellular organisms → Archaea	811	Open in IMG/M
3300015374\|Ga0132255_100079459	All Organisms → cellular organisms → Archaea	4389	Open in IMG/M
3300015374\|Ga0132255_101179213	Not Available	1153	Open in IMG/M
3300015374\|Ga0132255_101755180	All Organisms → cellular organisms → Archaea	942	Open in IMG/M
3300017997\|Ga0184610_1030469	Not Available	1511	Open in IMG/M
3300018000\|Ga0184604_10130644	All Organisms → cellular organisms → Archaea	811	Open in IMG/M
3300018028\|Ga0184608_10019326	All Organisms → cellular organisms → Archaea	2453	Open in IMG/M
3300018051\|Ga0184620_10216367	All Organisms → cellular organisms → Archaea	640	Open in IMG/M
3300018052\|Ga0184638_1007766	All Organisms → cellular organisms → Archaea	3567	Open in IMG/M
3300018056\|Ga0184623_10045459	All Organisms → cellular organisms → Archaea	1998	Open in IMG/M
3300018074\|Ga0184640_10012944	All Organisms → cellular organisms → Archaea	3043	Open in IMG/M
3300018076\|Ga0184609_10552723	All Organisms → cellular organisms → Archaea	520	Open in IMG/M
3300018465\|Ga0190269_11001152	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300018920\|Ga0190273_10153322	All Organisms → cellular organisms → Archaea	1380	Open in IMG/M
3300020018\|Ga0193721_1018180	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	1849	Open in IMG/M
3300022756\|Ga0222622_10002987	All Organisms → cellular organisms → Archaea	7287	Open in IMG/M
3300024353\|Ga0209979_1122525	All Organisms → cellular organisms → Archaea	1020	Open in IMG/M
3300025791\|Ga0210115_1045176	All Organisms → cellular organisms → Archaea	947	Open in IMG/M
3300025796\|Ga0210113_1026818	All Organisms → cellular organisms → Archaea	1179	Open in IMG/M
3300025923\|Ga0207681_10052920	Not Available	2754	Open in IMG/M
3300025927\|Ga0207687_10132737	All Organisms → cellular organisms → Archaea	1879	Open in IMG/M
3300025934\|Ga0207686_10328250	Not Available	1145	Open in IMG/M
3300025940\|Ga0207691_10013583	All Organisms → cellular organisms → Archaea	7785	Open in IMG/M
3300027490\|Ga0209899_1111228	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300027722\|Ga0209819_10013930	All Organisms → cellular organisms → Archaea	2625	Open in IMG/M
3300027821\|Ga0209811_10001145	All Organisms → cellular organisms → Archaea	9357	Open in IMG/M
3300027873\|Ga0209814_10064256	All Organisms → cellular organisms → Archaea	1539	Open in IMG/M
3300027880\|Ga0209481_10191319	All Organisms → cellular organisms → Archaea	1021	Open in IMG/M
3300027907\|Ga0207428_11120083	All Organisms → cellular organisms → Archaea	550	Open in IMG/M
3300027909\|Ga0209382_10003415	All Organisms → cellular organisms → Archaea	22014	Open in IMG/M
3300027909\|Ga0209382_12022117	All Organisms → cellular organisms → Archaea	552	Open in IMG/M
3300027954\|Ga0209859_1032908	Not Available	869	Open in IMG/M
3300028380\|Ga0268265_11137400	All Organisms → cellular organisms → Archaea	776	Open in IMG/M
3300028814\|Ga0307302_10490758	All Organisms → cellular organisms → Archaea	610	Open in IMG/M
3300031562\|Ga0310886_10172556	All Organisms → cellular organisms → Archaea	1157	Open in IMG/M
3300031847\|Ga0310907_10289248	All Organisms → cellular organisms → Archaea	820	Open in IMG/M
3300031847\|Ga0310907_10883158	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300031854\|Ga0310904_11425032	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300031858\|Ga0310892_10992300	All Organisms → cellular organisms → Archaea	591	Open in IMG/M
3300031892\|Ga0310893_10412005	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300031908\|Ga0310900_10981307	All Organisms → cellular organisms → Archaea	693	Open in IMG/M
3300031913\|Ga0310891_10176424	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300032003\|Ga0310897_10094479	Not Available	1177	Open in IMG/M
3300032003\|Ga0310897_10101555	All Organisms → cellular organisms → Archaea	1144	Open in IMG/M
3300032003\|Ga0310897_10552005	All Organisms → cellular organisms → Archaea	564	Open in IMG/M
3300032017\|Ga0310899_10659243	Not Available	528	Open in IMG/M
3300032075\|Ga0310890_10037984	Not Available	2659	Open in IMG/M
3300032075\|Ga0310890_10763662	All Organisms → cellular organisms → Archaea	763	Open in IMG/M
3300032075\|Ga0310890_10997006	All Organisms → cellular organisms → Archaea	673	Open in IMG/M
3300032179\|Ga0310889_10667096	All Organisms → cellular organisms → Archaea	541	Open in IMG/M
3300033475\|Ga0310811_11386844	All Organisms → cellular organisms → Archaea	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.30%
Host-Associated	Host-Associated	43.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	44.54%
Plants	Host-Associated → Plants	43.70%
Aquatic	Environmental → Aquatic	11.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.97%
Sediment	Environmental → Aquatic → Sediment	7.56%
Marine	Environmental → Aquatic → Marine	3.36%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.56%
Loam	Environmental → Terrestrial → Soil → Loam	4.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.20%
Sand	Environmental → Terrestrial → Soil → Sand	3.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.20%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.36%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Rhizosphere And Bulk Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Rhizosphere And Bulk Soil	1.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.84%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918002	Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005269	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024353	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MSB1_00147180	2140918002	Rhizosphere And Bulk Soil	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIETFRL
MSB1_00109970	2140918002	Rhizosphere And Bulk Soil	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIETFRLTISKKQQY
ICCgaii200_07035211	2228664021	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTNVLYTTQT
JGI11643J12802_109447181	3300000890	Soil	MSVISKTISLRVPPDLIYRALKDSRLEQLFPEFFIGVTRKLSIDKINEELAFKTNTQDGQIEIIE
F14TB_1014970724	3300001431	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKILIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTNVLYTTQT
JGI24806J26614_10253561	3300002090	Soil	MSIISKTITLRVPSNTIYLALKDTRLEKLFPEFFIGVTKTLVVDKINTKLTFRTNIQGSQIEI
JGI24808J26613_10115582	3300002099	Soil	MSLISKTISLRVPPGLIYRALKDTRLEQLFPEFFIGITRKVSIDKINEELAFKTKTQDGQIEIIEXFRLTISRSNNTNVLYTTQTNI
JGI24809J26612_10338583	3300002100	Soil	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKINEELAFKTNTQDGQIENHRNFQIDNI*
JGI25405J52794_100787381	3300003911	Tabebuia Heterophylla Rhizosphere	MSVISKTLSLRVPSDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKINEELAFKTNTQDGQIEIIETFRLKI
Ga0055467_101762493	3300003996	Natural And Restored Wetlands	MDPISKSINLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKT
Ga0062589_1025071021	3300004156	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRIISIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTNVLYTTQTNI
Ga0066676_100294031	3300005186	Soil	MSLISKTIALRVPPDLIYRALKDTRLEQLFPEFFIGMTRKISIDKINEELAFKTNTQDGQIEIIETFR
Ga0065706_10035741	3300005269	Switchgrass Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFFGVTRKLSIDKINEELAFKTNTQDGQIEIIETFRLIISK
Ga0065715_103623831	3300005293	Miscanthus Rhizosphere	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDG
Ga0065705_100227734	3300005294	Switchgrass Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEXFIGVTRKXSIDKINEELAFKTNTQDGQIEIIETFRLTISKKQQY*
Ga0070692_106520342	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEELFPEFFIGVTRKLSMDKINEEIAFKTNTQDGQIEIIE
Ga0070668_1017526531	3300005347	Switchgrass Rhizosphere	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTNVLYTTQTNVD
Ga0070697_1005468761	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSLISKTVSLRVPPNLIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQDG
Ga0068859_1020597742	3300005617	Switchgrass Rhizosphere	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNTQDDQIE
Ga0081455_100644503	3300005937	Tabebuia Heterophylla Rhizosphere	MSVISKTLSLRVPSDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKINEELAFKTNTQDGQIEIIETFRLKISGNTN
Ga0075417_105501092	3300006049	Populus Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIE
Ga0075422_106216661	3300006196	Populus Rhizosphere	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTQDGQIEIIETFRLK
Ga0075428_1024228991	3300006844	Populus Rhizosphere	MDLISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTEDGQIEIIETFR
Ga0075421_1016301302	3300006845	Populus Rhizosphere	MDLISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELEFKTNTEDGQIEIIETFRLKISGNNNTNVLYTTQTNIDGD
Ga0075430_1008120711	3300006846	Populus Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKINEELAFK
Ga0075433_101804303	3300006852	Populus Rhizosphere	MGLISKTVSIRVPPELVYRALKDARLEQLFPEFFIGITRKLSIDKVNEELAFKTNTQDGQIEIIE
Ga0075433_117510681	3300006852	Populus Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELAFKTNTQDGQIEIIETFRLI
Ga0075425_1000164031	3300006854	Populus Rhizosphere	MGLISKTVSIRVPPELVYRALKDARLEQLFPEFFIGITRKLSIDKVNEELAFKTNTQDGQIEIIETFRLIISKKNNT
Ga0075426_105355673	3300006903	Populus Rhizosphere	MGLISKTVSIRVPPELVYRALKDARLEQLFPEFFIGITRKLSIDKVNEELAFKTNTQDGQIEIIETFRLII
Ga0075424_1028760991	3300006904	Populus Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKINEELAFKTNTQDGQIEIIETFRLIIS
Ga0075419_105460951	3300006969	Populus Rhizosphere	MDLISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAF
Ga0075419_108780641	3300006969	Populus Rhizosphere	MDPISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAF
Ga0075418_111026672	3300009100	Populus Rhizosphere	MDLISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTEDGQIEIIETFRL
Ga0111538_131483191	3300009156	Populus Rhizosphere	MSLISKTISLRVSPELIYRALKDTRLEQLFPEFFIGITRKISINKLNEELVIKTNTQDGQIEIIETF
Ga0075423_125574602	3300009162	Populus Rhizosphere	MGLISKTVSIRVPPELVYRALKDARLEQLFPEFFIGITRKLSIDKVNEELAFKTNTQDGQIEIIETFRLIISK
Ga0105088_10455222	3300009810	Groundwater Sand	MSAISKTITLRVPSNITYRALKDTRLEQLFPEFFIGVTRKIKTDKDNNELKFSTTIQ
Ga0105087_10537192	3300009819	Groundwater Sand	MSLISKTVSLRVPPNLIYRALKDTRLEQLFPEFFIGITRKITIDKINEELAFKTNTRDGEIEIIETFR
Ga0126305_100085361	3300010036	Serpentine Soil	MSVISKTITLRVPSNIIYLALKDTRLEKLFPEFFIGITRKLVIDKANKQITFMTNTQDSQIEIIENFRLKISGINNTQVDYIT
Ga0126309_109462451	3300010039	Serpentine Soil	MSVISKTITLRVPSNIIYLALKDTRLEKLFPEFFIGITRKLVIDKANKQITFRTNTQDSQIEIIENFRLKISGINNTQVDY
Ga0134080_104486721	3300010333	Grasslands Soil	MSLISKTVSLRVPPNLIYRALKDTRLEQLFPEFFIGITRKISIDKINKELAFKTNTQDGQIEI
Ga0134128_126828751	3300010373	Terrestrial Soil	MSLISKTINLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKT
Ga0105239_105953722	3300010375	Corn Rhizosphere	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDG
Ga0105239_109470031	3300010375	Corn Rhizosphere	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNTQDDQIEIIEKFRLIISGNNITNVIYTTQTNLDG
Ga0157318_10222962	3300012482	Arabidopsis Rhizosphere	MSLISKIISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINKELAFKTNTQDGQIEIIETFRLMK
Ga0157343_10119832	3300012488	Arabidopsis Rhizosphere	MGLISKTVSIRVPPDLVYRALKDARLEQLFPEFFIGITRKLSIDKINEELAFKTNTQDGQIEITETFRLIISKNNNTDVLYTTQTNIDG
Ga0157324_10100712	3300012506	Arabidopsis Rhizosphere	MGLISKTVSIRVPPDLVYRALKDARLEQLFPEFFIGITRKLSIDKINEELAFKTNTQDGQIEI
Ga0157352_10870571	3300012519	Unplanted Soil	MSLISKTISLRVPTDLIYRAPKDTRLEQLFPEFFIGVTRKISIDKINKELTFKINTQDGQIEIIETFTLIISGNKNTN
Ga0162653_1000301391	3300012937	Soil	MPVISKTITLRVPLNIIYRALKDTRLEKLFPEFFIGITRKLVIDKENNELTFETRTEDSPIQTI*
Ga0126375_115650331	3300012948	Tropical Forest Soil	MAITIIVSMSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINKELAFKTNTQDGQIEIIETFRLMKSENNTTNVKYNTQ
Ga0164299_100029067	3300012958	Soil	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTNVLY
Ga0164299_100077295	3300012958	Soil	MSLISKTINLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTNVLY
Ga0164301_114972731	3300012960	Soil	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDGQ
Ga0164302_100036351	3300012961	Soil	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIVVTRKLSIDKVNEELAFKTNTQDGQIEIIE
Ga0164304_101830472	3300012986	Soil	MSLISKTINLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTN
Ga0163162_1000814212	3300013306	Switchgrass Rhizosphere	MGLISKTVSIRVPPELVYRALKDARLEQLFPEFFIGITRKLSIDKVNEELAFKTNTQDGQIEIIETFRLI
Ga0163162_101065952	3300013306	Switchgrass Rhizosphere	MSLISKTINLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTNVLYTTQTNVD
Ga0157372_106326052	3300013307	Corn Rhizosphere	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQD
Ga0157372_120515212	3300013307	Corn Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEELFPEFFIGVTRKLSMDKINEEIAFKTNTQDGQIEIIETFRLIISKNNNTDVLYTTQTNIDGD
Ga0157375_102205391	3300013308	Miscanthus Rhizosphere	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTN
Ga0157379_111230351	3300014968	Switchgrass Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEELFPEFFIGVTRKLSMDKINEEIAFKTNTQDGQIEII
Ga0132258_102898501	3300015371	Arabidopsis Rhizosphere	MSLISKTINLLVPPDLVYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAF
Ga0132258_119350421	3300015371	Arabidopsis Rhizosphere	MGLISKTVSIRVPPDLVYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQ
Ga0132258_129706682	3300015371	Arabidopsis Rhizosphere	MSLISKTITLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKINKELAFKTN
Ga0132258_135700011	3300015371	Arabidopsis Rhizosphere	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQ
Ga0132256_1009209742	3300015372	Arabidopsis Rhizosphere	MSLISKTISLRVPPDLIYRALRDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDGQIEIIETFRLIISK
Ga0132256_1018402042	3300015372	Arabidopsis Rhizosphere	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDGQIEIIE
Ga0132257_1000364294	3300015373	Arabidopsis Rhizosphere	MSLISKTISLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKLSMDKINEELAFKTNTQDGQIEIIETFRLIISK
Ga0132257_1016913242	3300015373	Arabidopsis Rhizosphere	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTNVLYTTQTN
Ga0132255_1000794595	3300015374	Arabidopsis Rhizosphere	MSLISKTINLLVPPDLVYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISGSNNTNVLY
Ga0132255_1011792132	3300015374	Arabidopsis Rhizosphere	MSLISKTISLRVPSDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINKELAFKTNTQDGQIE
Ga0132255_1017551802	3300015374	Arabidopsis Rhizosphere	MPILANMSLISKTISLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKVSIDKIKEEVVFKTNT
Ga0184610_10304694	3300017997	Groundwater Sediment	MSLISKTISLRVPPNLIYRALKDTRLEQLFPEFFIGIRRKISIDKINEELAFKTNT
Ga0184604_101306441	3300018000	Groundwater Sediment	MGLISKSVSLRVPPSLVYRALKDPRLEQLFPEFFIGITKKISIDRVNQELAFKTNTQDGQIEIIETFRLKISGNNNTNVLYTTQTNIDGD
Ga0184608_100193263	3300018028	Groundwater Sediment	MDLISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISFDKINQELAFKTNTED
Ga0184620_102163671	3300018051	Groundwater Sediment	MSLISKTIGLRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQDGQ
Ga0184638_10077663	3300018052	Groundwater Sediment	MSLISKTIGLRVPPALIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTN
Ga0184623_100454592	3300018056	Groundwater Sediment	MSLISKTIGLRVPPALIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQDGQ
Ga0184640_100129441	3300018074	Groundwater Sediment	MSLISKTISLRVPPNLIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTHDGQIEIVFKLKVTNFCKQK
Ga0184609_105527231	3300018076	Groundwater Sediment	MGLISKSVSLRVPPSLVYRALKDPRLEQLFPEFFIGITKKISIDRVNQELAFKTNTQDGQIEIIETFRLKIYGDNNTSVLY
Ga0190269_110011521	3300018465	Soil	MSLISKTIGLGVPPALIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQDGQIEIIETFRL
Ga0190273_101533221	3300018920	Soil	MDLISKSISLRVPPSLVYRALKDSRLEQLFPEFFIGITRKISFDKINQELAFKTNTEDGQIEIIETFRLKISGNNNTNVLYTTQTNID
Ga0193721_10181804	3300020018	Soil	MSLISKTVSLRVPPNLIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQDGQIEIIETFRFIISGNNNT
Ga0193737_10292842	3300021972	Soil	MSAISKTITLRVPSNITYRALKDTRLEELFPEFFIGVTRKIKTDKDNNELKFLQPSKE
Ga0222622_100029871	3300022756	Groundwater Sediment	MSLISKTIGLRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQDGQIEIIETFRLIISGNK
Ga0209979_11225252	3300024353	Deep Subsurface	MSLISKTVSLRIPSDLIYRALKDTRLEQLFPEFFIGVTRKISIDKINEELVFKTNTQDGQIEIIETFRL
Ga0210115_10451761	3300025791	Natural And Restored Wetlands	MDPISKSINLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTEDGQIEIIETFRLKISGSNNTNVLYTTQT
Ga0210113_10268181	3300025796	Natural And Restored Wetlands	MDPISKSINLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTEDGQIEIIETFRLKISGSNNTNVLYTTQTNID
Ga0207681_100529201	3300025923	Switchgrass Rhizosphere	MSLISKTINLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQ
Ga0207687_101327371	3300025927	Miscanthus Rhizosphere	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNTQDDQIEIIEKFRLIISGNNITNIIY
Ga0207686_103282502	3300025934	Miscanthus Rhizosphere	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNT
Ga0207691_1001358312	3300025940	Miscanthus Rhizosphere	MGLISKTVSIRVPPELVYRALKDARLEQLFPEFFIGITRKLSIDKVNEELAFKTNT
Ga0209899_11112281	3300027490	Groundwater Sand	MSLISKTVSLRVPPNLIYRALKDTRLEQLFPEFFIGITRKITIDKINEELAFKTN
Ga0209819_100139301	3300027722	Freshwater Sediment	MDLISKSINLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNT
Ga0209811_100011451	3300027821	Surface Soil	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFR
Ga0209814_100642563	3300027873	Populus Rhizosphere	MSLISKTIGLRVPPDLIYRALKDTRLQQLFPEFFIGITRKISIDKINEELAFKTNTQDGQIEII
Ga0209481_101913192	3300027880	Populus Rhizosphere	MNLISKSISLRVPPSLVYRALKDTRLEQLFPEFFIGITRKISIDKINQELAFKTNTHDGQIEIIETFRLKISGNKNTNVLYTTQTNIDGD
Ga0207428_111200831	3300027907	Populus Rhizosphere	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTQDGQIE
Ga0209382_100034151	3300027909	Populus Rhizosphere	MDLISKSISLRVPPSLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELEFKTNTEDGQIEIIETFRLKISGNNNTNVLYTTQ
Ga0209382_120221171	3300027909	Populus Rhizosphere	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTQDGQ
Ga0209859_10329082	3300027954	Groundwater Sand	MSLISKTVSLRVPPNLIYRALKDTRLEQLFPEFFIGITRKITIDKINEELAFKT
Ga0268265_111374002	3300028380	Switchgrass Rhizosphere	MSLISKTINLRVPPDLIYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTNTQDGQIE
Ga0307302_104907582	3300028814	Soil	MSLISKTIGLRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEELAFKTNTQ
Ga0310886_101725561	3300031562	Soil	MSLISKTINLRVPPNLIYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIEIIETFRLVISG
Ga0310907_102892481	3300031847	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRIISIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTN
Ga0310907_108831581	3300031847	Soil	MGVISKTVSIRVPPDLIYRALKDTRFEQLFPEFFIGITRKISIDKINEEIAFKTNTQD
Ga0310904_114250321	3300031854	Soil	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNTQDDQIEIIEKF
Ga0310892_109923001	3300031858	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRIISIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTNVL
Ga0310893_104120051	3300031892	Soil	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKLSIDKINEELAFKTNTQDGQIE
Ga0310900_109813072	3300031908	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTNVLYT
Ga0310891_101764241	3300031913	Soil	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNTQDDQIEIIEKFRLIISGNNITNVI
Ga0310897_100944791	3300032003	Soil	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKISIDKVNEELAFKTNTQDGQIE
Ga0310897_101015553	3300032003	Soil	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNT
Ga0310897_105520051	3300032003	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRIISIDKINQELAFKTNTQDGQIEIIETFRLKISGN
Ga0310899_106592432	3300032017	Soil	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKLSIDKVNEELAFKTN
Ga0310890_100379844	3300032075	Soil	MRLISKTVSIRVPPALVYRALKDTRLEQLFPEFFIGVTRKLSTDKVNEELAFKTNTQD
Ga0310890_107636621	3300032075	Soil	MSLISKTISLRVSPELIYRALKDTRLEQLFPEFFIGITRKISINKLNEELVIKTNTQDGQIEIIETFRLIIS
Ga0310890_109970061	3300032075	Soil	MDLISKSISLRVPPGLVYRALKDPRLEQLFPEFFIGITRKISIDKINQELAFKTNTQDGQIEIIETFRLKISGNNNTN
Ga0310889_106670961	3300032179	Soil	MGVISKTVSIRVPPDLIYRALKDTRLEQLFPEFFIGITRKISIDKINEEIAFKTNTQDDQIEIIEKFRLIIS
Ga0310811_113868441	3300033475	Soil	MGLISKTVSIRVPPDLVYRALKDARLEQLFPEFFIGITRKLSIDKINEELAFKTNTQDGQIEIIETFRLIISKNNNTDVLY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075048

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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